Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250450 | TKY55571.1 | 42.529 | 174 | 91 | 5 | 124 | 290 | 509 | 680 | 1.79e-25 | 123 |
| Msa1250450 | TKY55571.1 | 48.148 | 675 | 187 | 22 | 1 | 530 | 2 | 658 | 3.46e-156 | 471 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250450 | sp|Q9T072|BH025_ARATH | 35.938 | 256 | 125 | 8 | 304 | 529 | 58 | 304 | 9.71e-32 | 128 |
| Msa1250450 | sp|Q9T072|BH025_ARATH | 40.268 | 149 | 87 | 1 | 142 | 290 | 181 | 327 | 4.05e-25 | 109 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250450 | A0A072TFG1 | 42.775 | 173 | 79 | 4 | 373 | 530 | 187 | 354 | 2.09e-23 | 113 |
| Msa1250450 | A0A072TFG1 | 61.702 | 376 | 54 | 7 | 1 | 288 | 1 | 374 | 8.85e-133 | 400 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1250450 | TF | bHLH |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1250420 | Msa1250450 | 0.956113 | 6.321389e-114 | -8.615850e-47 |
| Msa1250450 | Msa1297380 | 0.944058 | 3.910216e-103 | -8.615850e-47 |
| Msa1133340 | Msa1250450 | 0.939695 | 8.249775e-100 | -8.615850e-47 |
| Msa0511780 | Msa1250450 | 0.827256 | 1.729331e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250450 | MtrunA17_Chr4g0054581 | 61.702 | 376 | 54 | 7 | 1 | 288 | 1 | 374 | 1.70e-136 | 400 |
| Msa1250450 | MtrunA17_Chr4g0054581 | 42.775 | 173 | 79 | 4 | 373 | 530 | 187 | 354 | 4.03e-27 | 113 |
| Msa1250450 | MtrunA17_Chr4g0054571 | 83.908 | 261 | 20 | 4 | 290 | 530 | 51 | 309 | 4.55e-131 | 384 |
| Msa1250450 | MtrunA17_Chr4g0054571 | 33.123 | 317 | 161 | 13 | 13 | 291 | 29 | 332 | 5.07e-25 | 105 |
| Msa1250450 | MtrunA17_Chr2g0307131 | 49.864 | 367 | 89 | 11 | 1 | 288 | 1 | 351 | 3.60e-87 | 273 |
| Msa1250450 | MtrunA17_Chr2g0307131 | 39.548 | 177 | 81 | 3 | 370 | 530 | 165 | 331 | 2.60e-25 | 107 |
| Msa1250450 | MtrunA17_Chr2g0307141 | 49.057 | 371 | 90 | 11 | 1 | 288 | 1 | 355 | 1.38e-84 | 266 |
| Msa1250450 | MtrunA17_Chr2g0307141 | 39.506 | 162 | 74 | 3 | 384 | 530 | 183 | 335 | 1.62e-23 | 102 |
| Msa1250450 | MtrunA17_Chr6g0468491 | 47.170 | 318 | 106 | 9 | 24 | 288 | 1 | 309 | 3.10e-74 | 238 |
| Msa1250450 | MtrunA17_Chr6g0468491 | 35.849 | 212 | 106 | 5 | 335 | 530 | 92 | 289 | 1.96e-26 | 109 |
| Msa1250450 | MtrunA17_Chr4g0033391 | 46.264 | 348 | 95 | 10 | 1 | 288 | 1 | 316 | 4.04e-74 | 238 |
| Msa1250450 | MtrunA17_Chr4g0033391 | 38.462 | 169 | 69 | 4 | 381 | 530 | 144 | 296 | 1.95e-23 | 101 |
| Msa1250450 | MtrunA17_Chr4g0054621 | 43.099 | 355 | 117 | 13 | 1 | 288 | 1 | 337 | 2.17e-69 | 226 |
| Msa1250450 | MtrunA17_Chr4g0054621 | 30.952 | 252 | 133 | 6 | 297 | 530 | 89 | 317 | 1.84e-21 | 95.9 |
| Msa1250450 | MtrunA17_Chr6g0468461 | 44.315 | 343 | 97 | 11 | 1 | 276 | 1 | 316 | 1.88e-67 | 221 |
| Msa1250450 | MtrunA17_Chr6g0468461 | 31.274 | 259 | 128 | 6 | 295 | 531 | 82 | 312 | 3.63e-21 | 95.1 |
| Msa1250450 | MtrunA17_Chr4g0033281 | 45.161 | 341 | 124 | 12 | 1 | 293 | 1 | 326 | 1.39e-64 | 213 |
| Msa1250450 | MtrunA17_Chr4g0033281 | 37.766 | 188 | 87 | 4 | 359 | 530 | 128 | 301 | 1.14e-19 | 90.5 |
| Msa1250450 | MtrunA17_Chr4g0033291 | 44.509 | 346 | 112 | 9 | 1 | 288 | 1 | 324 | 4.69e-64 | 212 |
| Msa1250450 | MtrunA17_Chr4g0033291 | 40.854 | 164 | 88 | 3 | 373 | 530 | 144 | 304 | 6.01e-24 | 102 |
| Msa1250450 | MtrunA17_Chr5g0400661 | 45.690 | 232 | 91 | 6 | 332 | 530 | 85 | 314 | 5.76e-46 | 164 |
| Msa1250450 | MtrunA17_Chr5g0400661 | 40.000 | 170 | 90 | 4 | 129 | 288 | 167 | 334 | 5.12e-29 | 117 |
| Msa1250450 | MtrunA17_Chr7g0225901 | 40.000 | 270 | 107 | 8 | 24 | 268 | 1 | 240 | 2.90e-44 | 157 |
| Msa1250450 | MtrunA17_Chr7g0225901 | 39.080 | 174 | 80 | 4 | 373 | 530 | 77 | 240 | 6.01e-28 | 112 |
| Msa1250450 | MtrunA17_Chr5g0400621 | 56.757 | 148 | 59 | 2 | 142 | 288 | 186 | 329 | 3.78e-41 | 151 |
| Msa1250450 | MtrunA17_Chr5g0400621 | 38.735 | 253 | 113 | 7 | 299 | 530 | 78 | 309 | 1.97e-32 | 127 |
| Msa1250450 | MtrunA17_Chr5g0400641 | 47.619 | 147 | 70 | 3 | 129 | 274 | 16 | 156 | 1.43e-33 | 125 |
| Msa1250450 | MtrunA17_Chr5g0400641 | 43.396 | 159 | 66 | 5 | 387 | 530 | 1 | 150 | 1.56e-25 | 102 |
| Msa1250450 | MtrunA17_Chr4g0002801 | 47.059 | 153 | 70 | 4 | 143 | 288 | 182 | 330 | 3.34e-33 | 129 |
| Msa1250450 | MtrunA17_Chr4g0002801 | 37.500 | 216 | 110 | 6 | 332 | 530 | 103 | 310 | 9.86e-30 | 119 |
| Msa1250450 | MtrunA17_Chr2g0280161 | 41.250 | 160 | 86 | 4 | 129 | 286 | 195 | 348 | 4.94e-32 | 126 |
| Msa1250450 | MtrunA17_Chr2g0280161 | 47.879 | 165 | 57 | 6 | 384 | 530 | 177 | 330 | 2.35e-30 | 121 |
| Msa1250450 | MtrunA17_Chr4g0049331 | 49.693 | 163 | 56 | 5 | 384 | 530 | 135 | 287 | 1.94e-31 | 123 |
| Msa1250450 | MtrunA17_Chr4g0049331 | 40.411 | 146 | 78 | 5 | 142 | 284 | 164 | 303 | 9.52e-24 | 101 |
| Msa1250450 | MtrunA17_Chr4g0002781 | 43.919 | 148 | 81 | 2 | 142 | 288 | 203 | 349 | 4.33e-28 | 115 |
| Msa1250450 | MtrunA17_Chr4g0002781 | 34.081 | 223 | 112 | 5 | 332 | 530 | 118 | 329 | 4.83e-27 | 112 |
| Msa1250450 | MtrunA17_Chr8g0336681 | 42.667 | 150 | 74 | 4 | 143 | 284 | 186 | 331 | 7.02e-27 | 111 |
| Msa1250450 | MtrunA17_Chr8g0336681 | 34.934 | 229 | 119 | 7 | 326 | 530 | 93 | 315 | 4.43e-20 | 91.7 |
| Msa1250450 | MtrunA17_Chr2g0333641 | 42.361 | 144 | 74 | 4 | 142 | 283 | 166 | 302 | 9.63e-26 | 107 |
| Msa1250450 | MtrunA17_Chr2g0333641 | 35.294 | 221 | 108 | 9 | 332 | 530 | 80 | 287 | 3.73e-22 | 97.4 |
| Msa1250450 | MtrunA17_Chr4g0054561 | 43.056 | 144 | 73 | 4 | 142 | 283 | 184 | 320 | 2.57e-25 | 106 |
| Msa1250450 | MtrunA17_Chr4g0054561 | 41.566 | 166 | 63 | 6 | 384 | 530 | 155 | 305 | 3.24e-24 | 103 |
| Msa1250450 | MtrunA17_Chr2g0333621 | 37.908 | 153 | 89 | 4 | 142 | 292 | 167 | 315 | 4.07e-25 | 105 |
| Msa1250450 | MtrunA17_Chr2g0333621 | 35.270 | 241 | 116 | 8 | 317 | 530 | 64 | 291 | 1.82e-24 | 103 |
| Msa1250450 | MtrunA17_Chr4g0002831 | 39.216 | 153 | 62 | 4 | 143 | 286 | 72 | 202 | 4.35e-25 | 102 |
| Msa1250450 | MtrunA17_Chr4g0054551 | 40.972 | 144 | 76 | 4 | 142 | 283 | 184 | 320 | 6.76e-25 | 105 |
| Msa1250450 | MtrunA17_Chr4g0054551 | 37.952 | 166 | 69 | 5 | 384 | 530 | 155 | 305 | 1.26e-20 | 93.2 |
| Msa1250450 | MtrunA17_Chr2g0333611 | 36.145 | 166 | 89 | 5 | 130 | 290 | 64 | 217 | 1.28e-23 | 99.4 |
| Msa1250450 | MtrunA17_Chr2g0333611 | 32.530 | 166 | 76 | 5 | 385 | 530 | 46 | 195 | 1.69e-14 | 72.8 |
| Msa1250450 | MtrunA17_Chr2g0333541 | 39.241 | 158 | 93 | 2 | 130 | 287 | 113 | 267 | 2.05e-22 | 97.4 |
| Msa1250450 | MtrunA17_Chr2g0333541 | 30.319 | 188 | 101 | 5 | 363 | 530 | 71 | 248 | 5.68e-13 | 69.3 |
| Msa1250450 | MtrunA17_Chr7g0233441 | 37.013 | 154 | 66 | 4 | 142 | 286 | 63 | 194 | 2.77e-22 | 94.7 |
| Msa1250450 | MtrunA17_Chr4g0002851 | 33.149 | 181 | 80 | 5 | 118 | 286 | 43 | 194 | 5.73e-22 | 94.0 |
| Msa1250450 | MtrunA17_Chr7g0249811 | 30.556 | 216 | 111 | 5 | 330 | 530 | 117 | 308 | 7.64e-19 | 87.8 |
| Msa1250450 | MtrunA17_Chr7g0249811 | 37.500 | 160 | 84 | 4 | 130 | 288 | 184 | 328 | 1.29e-18 | 87.4 |
| Msa1250450 | MtrunA17_Chr5g0400671 | 27.652 | 264 | 133 | 4 | 304 | 531 | 63 | 304 | 1.16e-16 | 81.3 |
| Msa1250450 | MtrunA17_Chr5g0400671 | 36.913 | 149 | 84 | 4 | 142 | 288 | 183 | 323 | 1.45e-16 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250450 | AT4G37850.2 | 35.938 | 256 | 125 | 8 | 304 | 529 | 58 | 304 | 9.87e-33 | 128 |
| Msa1250450 | AT4G37850.2 | 40.268 | 149 | 87 | 1 | 142 | 290 | 181 | 327 | 4.12e-26 | 109 |
| Msa1250450 | AT4G37850.1 | 35.938 | 256 | 125 | 8 | 304 | 529 | 58 | 304 | 9.87e-33 | 128 |
| Msa1250450 | AT4G37850.1 | 40.268 | 149 | 87 | 1 | 142 | 290 | 181 | 327 | 4.12e-26 | 109 |
| Msa1250450 | AT2G22760.2 | 37.017 | 181 | 85 | 5 | 372 | 530 | 101 | 274 | 7.56e-25 | 104 |
| Msa1250450 | AT2G22760.2 | 35.156 | 128 | 79 | 3 | 143 | 268 | 149 | 274 | 3.44e-15 | 76.6 |
| Msa1250450 | AT2G22760.1 | 36.464 | 181 | 86 | 5 | 372 | 530 | 101 | 274 | 2.46e-24 | 103 |
| Msa1250450 | AT2G22760.1 | 36.913 | 149 | 89 | 4 | 143 | 288 | 149 | 295 | 3.16e-21 | 94.7 |
| Msa1250450 | AT2G22750.3 | 36.759 | 253 | 128 | 7 | 303 | 529 | 63 | 309 | 8.91e-24 | 102 |
| Msa1250450 | AT2G22750.3 | 39.375 | 160 | 92 | 3 | 129 | 286 | 172 | 328 | 1.13e-20 | 93.6 |
| Msa1250450 | AT2G22750.4 | 36.759 | 253 | 128 | 7 | 303 | 529 | 63 | 309 | 9.65e-24 | 102 |
| Msa1250450 | AT2G22750.4 | 39.375 | 160 | 91 | 4 | 129 | 286 | 172 | 327 | 2.40e-19 | 89.7 |
| Msa1250450 | AT2G22750.5 | 36.759 | 253 | 128 | 7 | 303 | 529 | 59 | 305 | 1.12e-23 | 102 |
| Msa1250450 | AT2G22750.5 | 39.375 | 160 | 92 | 3 | 129 | 286 | 168 | 324 | 1.36e-20 | 93.6 |
| Msa1250450 | AT2G22750.1 | 36.759 | 253 | 128 | 7 | 303 | 529 | 35 | 281 | 1.21e-23 | 101 |
| Msa1250450 | AT2G22750.1 | 39.375 | 160 | 91 | 4 | 129 | 286 | 144 | 299 | 1.89e-19 | 89.7 |
| Msa1250450 | AT2G22750.2 | 36.759 | 253 | 128 | 7 | 303 | 529 | 35 | 281 | 1.28e-23 | 101 |
| Msa1250450 | AT2G22750.2 | 39.375 | 160 | 92 | 3 | 129 | 286 | 144 | 300 | 9.13e-21 | 93.6 |
| Msa1250450 | AT2G22770.1 | 31.282 | 195 | 111 | 4 | 357 | 530 | 107 | 299 | 1.03e-19 | 90.5 |
| Msa1250450 | AT2G22770.1 | 31.875 | 160 | 89 | 4 | 143 | 286 | 162 | 317 | 1.99e-17 | 84.0 |
Find 96 sgRNAs with CRISPR-Local
Find 446 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGAATCCCCTTGTGCTTC+TGG | 0.171911 | 8_2:+46127090 | None:intergenic |
| GTGTTGGTAGGAGGAGAATT+TGG | 0.206656 | 8_2:+46127930 | None:intergenic |
| CAGCAAATGGCTTTCTGATT+TGG | 0.214444 | 8_2:-46128362 | Msa1250450:intron |
| GACATGAATGTTTCTCATTT+GGG | 0.281293 | 8_2:+46127833 | None:intergenic |
| AGACATGAATGTTTCTCATT+TGG | 0.284212 | 8_2:+46127832 | None:intergenic |
| CATTAGCATCAAGGAAGTTT+AGG | 0.295193 | 8_2:+46128210 | None:intergenic |
| AAGTTTAGGTTGCATTCTTC+AGG | 0.308908 | 8_2:+46128224 | None:intergenic |
| CCAGAAGCACAAGGGGATTC+TGG | 0.313026 | 8_2:-46127090 | Msa1250450:CDS |
| TGTTGGTAGGAGGAGAATTT+GGG | 0.316269 | 8_2:+46127931 | None:intergenic |
| GTTTCTTCTGATACGTTCAT+TGG | 0.319465 | 8_2:+46128385 | None:intergenic |
| CATCATCATCAATGATATTA+TGG | 0.325312 | 8_2:+46127228 | None:intergenic |
| ATATAATTGCTGAGAGAATA+AGG | 0.332685 | 8_2:-46121233 | Msa1250450:CDS |
| TTTCAAGCTTTGTGCTGAAT+TGG | 0.333352 | 8_2:+46128498 | None:intergenic |
| CAGGAGTGAGTCCACAAAAC+TGG | 0.341350 | 8_2:+46127904 | None:intergenic |
| CCTTATTCCAAACCTCAAAA+AGG | 0.354140 | 8_2:-46121172 | Msa1250450:intron |
| ATAGCAGTGTCTTACCCTTT+GGG | 0.356671 | 8_2:-46127022 | Msa1250450:CDS |
| CAAATCAGAAAGCCATTTGC+TGG | 0.362893 | 8_2:+46128363 | None:intergenic |
| GAAGTGTTGTTCCTTCAAAC+AGG | 0.367624 | 8_2:+46128446 | None:intergenic |
| TTCATTTGGTTCCTCTGCTC+TGG | 0.370847 | 8_2:-46120315 | Msa1250450:CDS |
| CATTTCTTCACAACTGTAAC+CGG | 0.376716 | 8_2:+46120566 | None:intergenic |
| AATAGCAGTGTCTTACCCTT+TGG | 0.385303 | 8_2:-46127023 | Msa1250450:CDS |
| GAAGTTGAAGCTAGTTTGTC+AGG | 0.388975 | 8_2:-46120446 | Msa1250450:CDS |
| CTGAACTCAAACATTGTTGT+TGG | 0.389224 | 8_2:+46128159 | None:intergenic |
| TCTCACTCTTCCCTGTTTGA+AGG | 0.394980 | 8_2:-46128457 | Msa1250450:five_prime_UTR |
| TCATTACACAAGTGTCATAA+TGG | 0.412838 | 8_2:-46128425 | Msa1250450:exon |
| AATAGAGAAACTTGGTCTCT+TGG | 0.416449 | 8_2:-46120357 | Msa1250450:CDS |
| AGCATAAACGCGGAAATTGT+TGG | 0.417963 | 8_2:-46121534 | Msa1250450:CDS |
| GACAAACTAGCTTCAACTTC+AGG | 0.420762 | 8_2:+46120449 | None:intergenic |
| GTTGGTGATAGTTGTGGAAT+TGG | 0.425475 | 8_2:+46128133 | None:intergenic |
| GTCTGCGGATGTCGATGTTT+CGG | 0.425537 | 8_2:-46120534 | Msa1250450:CDS |
| TGAACTCAAACATTGTTGTT+GGG | 0.428381 | 8_2:+46128160 | None:intergenic |
| AAGGTTGGTACAACCTTCAT+TGG | 0.429134 | 8_2:+46121372 | None:intergenic |
| CAGGGAAAGAGATGCTGATT+CGG | 0.434047 | 8_2:-46127121 | Msa1250450:CDS |
| CGGTTACAGTTGTGAAGAAA+TGG | 0.434295 | 8_2:-46120565 | Msa1250450:CDS |
| CTCTCAGCAATTATATGATC+TGG | 0.438168 | 8_2:+46121240 | None:intergenic |
| ATTCTTTGAGTTCACAACTT+TGG | 0.438205 | 8_2:+46121338 | None:intergenic |
| CAAGTGCAAGCAAAAGTGTC+AGG | 0.441082 | 8_2:-46127140 | Msa1250450:CDS |
| CAAAAGCAAAAGTGTAGAAC+CGG | 0.446629 | 8_2:-46120585 | Msa1250450:CDS |
| AGGAGTGAGTCCACAAAACT+GGG | 0.451243 | 8_2:+46127905 | None:intergenic |
| AAAGTATGTGAAGGAGCTTA+AGG | 0.476822 | 8_2:-46120636 | Msa1250450:intron |
| TGTTGTTGGGTTTGTTCTTG+TGG | 0.480560 | 8_2:+46128173 | None:intergenic |
| TGTGTGATGAGTTGTAGATT+TGG | 0.488926 | 8_2:+46121263 | None:intergenic |
| AAAATGTACCTGAGCAATGA+TGG | 0.489397 | 8_2:+46120286 | None:intergenic |
| GTTTAGAGAGTAACTTAGAA+AGG | 0.489805 | 8_2:-46121509 | Msa1250450:CDS |
| TGACATTACTATCATTGCTC+AGG | 0.494765 | 8_2:-46126991 | Msa1250450:intron |
| AAAGTTGTGAACTCAAAGAA+TGG | 0.494937 | 8_2:-46121336 | Msa1250450:CDS |
| AGCAATGATAGTAATGTCAA+TGG | 0.495292 | 8_2:+46126995 | None:intergenic |
| CGAGAATCCACCGCCAATGA+AGG | 0.497907 | 8_2:-46121385 | Msa1250450:CDS |
| TTTGACTTTGAGTTTAAGGC+AGG | 0.501893 | 8_2:+46127885 | None:intergenic |
| GGCCATAACCATCATTGCTC+AGG | 0.505461 | 8_2:-46120294 | Msa1250450:CDS |
| GTTTCCGTTACATGAATTCG+AGG | 0.514053 | 8_2:+46120505 | None:intergenic |
| TCATCAATGATATTATGGTC+TGG | 0.514204 | 8_2:+46127233 | None:intergenic |
| AAACTTCCTTGATGCTAATG+AGG | 0.524526 | 8_2:-46128207 | Msa1250450:CDS |
| CTGAAAGAGCTATGAACTGT+TGG | 0.532934 | 8_2:+46121196 | None:intergenic |
| GGTACAACCTTCATTGGCGG+TGG | 0.533530 | 8_2:+46121378 | None:intergenic |
| GGAGCAAGTGAAAGTGTTGG+AGG | 0.541545 | 8_2:-46120615 | Msa1250450:CDS |
| ACTCTTCCTCATTAGCATCA+AGG | 0.553454 | 8_2:+46128201 | None:intergenic |
| TATCAGAAGAAACCAGCAAA+TGG | 0.554188 | 8_2:-46128375 | Msa1250450:CDS |
| TGAATGTTTCTCATTTGGGG+TGG | 0.558418 | 8_2:+46127837 | None:intergenic |
| TAAGGAGCAAGTGAAAGTGT+TGG | 0.569133 | 8_2:-46120618 | Msa1250450:CDS |
| GTTGGTACAACCTTCATTGG+CGG | 0.570550 | 8_2:+46121375 | None:intergenic |
| TATAGAGAAATAGAGAAACT+TGG | 0.574558 | 8_2:-46120365 | Msa1250450:CDS |
| TAGCAGTGTCTTACCCTTTG+GGG | 0.577291 | 8_2:-46127021 | Msa1250450:CDS |
| AATCCTCTGTGAGAAAGATA+AGG | 0.580692 | 8_2:-46120405 | Msa1250450:CDS |
| TACCTGAGCAATGATGGTTA+TGG | 0.585304 | 8_2:+46120292 | None:intergenic |
| TAAAATTTGGTAGATGGACA+AGG | 0.590351 | 8_2:-46127369 | Msa1250450:intron |
| ATGTCAATGGAATCCCCAAA+GGG | 0.596532 | 8_2:+46127008 | None:intergenic |
| AGGGTACAACTTGAGCATAA+AGG | 0.600355 | 8_2:-46126015 | Msa1250450:CDS |
| ACTTCAATGCTGCCATGCGT+AGG | 0.601033 | 8_2:+46125979 | None:intergenic |
| TGAAATTGAGAGACCAACCA+TGG | 0.603140 | 8_2:-46128066 | Msa1250450:CDS |
| TGGTAGGAGGAGAATTTGGG+AGG | 0.603292 | 8_2:+46127934 | None:intergenic |
| GAATGAGTTGGTGATAGTTG+TGG | 0.603767 | 8_2:+46128127 | None:intergenic |
| GGGGATTCTGGTGAAAGTCA+TGG | 0.606251 | 8_2:-46127078 | Msa1250450:CDS |
| GATTCACTGCCAGAAGCACA+AGG | 0.606463 | 8_2:-46127099 | Msa1250450:CDS |
| TTCACTGCCAGAAGCACAAG+GGG | 0.606586 | 8_2:-46127097 | Msa1250450:CDS |
| AAGTTGAAGCTAGTTTGTCA+GGG | 0.612905 | 8_2:-46120445 | Msa1250450:CDS |
| GATGGTTATGGCCAGAGCAG+AGG | 0.614054 | 8_2:+46120304 | None:intergenic |
| AATGTCAATGGAATCCCCAA+AGG | 0.614554 | 8_2:+46127007 | None:intergenic |
| TGTTTCATCAGTGAATGAGT+TGG | 0.619624 | 8_2:+46128115 | None:intergenic |
| ACATGAATGTTTCTCATTTG+GGG | 0.622328 | 8_2:+46127834 | None:intergenic |
| AAGTGTTGTTCCTTCAAACA+GGG | 0.627695 | 8_2:+46128447 | None:intergenic |
| AAGTGCAAGCAAAAGTGTCA+GGG | 0.633121 | 8_2:-46127139 | Msa1250450:CDS |
| CAGGAGAGCAACAAGAAGAA+CGG | 0.634139 | 8_2:-46121294 | Msa1250450:CDS |
| GAAAACAAAGGTAGAGTCCG+TGG | 0.640082 | 8_2:-46127270 | Msa1250450:CDS |
| GAGTGAGTCCACAAAACTGG+GGG | 0.649560 | 8_2:+46127907 | None:intergenic |
| CTGCCTTATCTTTCTCACAG+AGG | 0.654568 | 8_2:+46120402 | None:intergenic |
| TGGTTTCTTCAGAACAACCA+CGG | 0.659948 | 8_2:+46127253 | None:intergenic |
| GGAGTGAGTCCACAAAACTG+GGG | 0.660208 | 8_2:+46127906 | None:intergenic |
| ACTTCCTCGAATTCATGTAA+CGG | 0.661077 | 8_2:-46120509 | Msa1250450:CDS |
| TGAAGGTTGTACCAACCTTG+AGG | 0.663007 | 8_2:-46121368 | Msa1250450:CDS |
| ATTCACTGCCAGAAGCACAA+GGG | 0.669813 | 8_2:-46127098 | Msa1250450:CDS |
| GAAATGGTCTGAACTGTCTG+CGG | 0.672100 | 8_2:-46120549 | Msa1250450:CDS |
| CAACCAATCAAGCATAAACG+CGG | 0.676384 | 8_2:-46121544 | Msa1250450:intron |
| AGAACAAAACAAGAAAACAA+AGG | 0.679620 | 8_2:-46127282 | Msa1250450:CDS |
| ACTTGTCAAGAACCTACGCA+TGG | 0.686710 | 8_2:-46125991 | Msa1250450:CDS |
| AGTGAGTCCACAAAACTGGG+GGG | 0.773710 | 8_2:+46127908 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATTAAAAAAAATATT+TGG | - | chr8_2:46124741-46124760 | Msa1250450:intron | 0.0% |
| !! | ATATATTAAAAAAAATATTT+GGG | - | chr8_2:46124742-46124761 | Msa1250450:intron | 0.0% |
| !! | TATATATATATATATATATA+TGG | + | chr8_2:46125060-46125079 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+AGG | - | chr8_2:46125060-46125079 | Msa1250450:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | + | chr8_2:46125059-46125078 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | + | chr8_2:46125060-46125079 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAT+AGG | - | chr8_2:46125059-46125078 | Msa1250450:intron | 0.0% |
| !! | TATATATATATATATATATA+GGG | - | chr8_2:46125060-46125079 | Msa1250450:intron | 0.0% |
| !! | ATATATATATATATATATAT+GGG | + | chr8_2:46125059-46125078 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | + | chr8_2:46125060-46125079 | None:intergenic | 0.0% |
| !! | ATATATATATATATATATAA+AGG | - | chr8_2:46125093-46125112 | Msa1250450:intron | 0.0% |
| !! | AACATTTATAAAATAATACA+TGG | - | chr8_2:46123304-46123323 | Msa1250450:intron | 10.0% |
| !! | AAAAAAAATAAAATACCTAA+TGG | + | chr8_2:46123529-46123548 | None:intergenic | 10.0% |
| !!! | ATTATGTTTTATTTTATTAG+GGG | + | chr8_2:46124472-46124491 | None:intergenic | 10.0% |
| !! | TCAAATACTGTTATAAAATT+TGG | - | chr8_2:46121430-46121449 | Msa1250450:CDS | 15.0% |
| !! | TTTAAACAATGAATATTTAG+TGG | + | chr8_2:46121879-46121898 | None:intergenic | 15.0% |
| !!! | AAGTATTATTATTTTGTTTG+AGG | - | chr8_2:46121934-46121953 | Msa1250450:intron | 15.0% |
| !! | AAGGAATTTATTATCATAAA+AGG | - | chr8_2:46122024-46122043 | Msa1250450:intron | 15.0% |
| !!! | ATTATTACATTTTTTTGTCT+AGG | - | chr8_2:46122168-46122187 | Msa1250450:intron | 15.0% |
| !!! | TTATTACATTTTTTTGTCTA+GGG | - | chr8_2:46122169-46122188 | Msa1250450:intron | 15.0% |
| !!! | AAACTTGTGTTTTTTTTTTT+TGG | - | chr8_2:46122317-46122336 | Msa1250450:intron | 15.0% |
| !!! | AACTTGTGTTTTTTTTTTTT+GGG | - | chr8_2:46122318-46122337 | Msa1250450:intron | 15.0% |
| !! | CAAGTATAGAAATAATTTAT+TGG | - | chr8_2:46122380-46122399 | Msa1250450:intron | 15.0% |
| !!! | ATTAAATGCACAAAATTTTA+AGG | - | chr8_2:46122441-46122460 | Msa1250450:intron | 15.0% |
| !! | TATATTAAACATATCTTCTA+GGG | + | chr8_2:46123041-46123060 | None:intergenic | 15.0% |
| !! | ATATATTAAACATATCTTCT+AGG | + | chr8_2:46123042-46123061 | None:intergenic | 15.0% |
| !! | GATATGTTTAATATATATTG+AGG | - | chr8_2:46123046-46123065 | Msa1250450:intron | 15.0% |
| !! | AGATATTATGAGTTAATATT+GGG | - | chr8_2:46123159-46123178 | Msa1250450:intron | 15.0% |
| !! | ATTTATAAAATAATACATGG+TGG | - | chr8_2:46123307-46123326 | Msa1250450:intron | 15.0% |
| !!! | TCTTCATTTCTAAAAATAAA+CGG | + | chr8_2:46123399-46123418 | None:intergenic | 15.0% |
| !!! | TCTTCATTTTTCAAAATAAA+TGG | - | chr8_2:46123453-46123472 | Msa1250450:intron | 15.0% |
| !! | CATTATTACAAATAAAAAGT+TGG | + | chr8_2:46123603-46123622 | None:intergenic | 15.0% |
| !!! | CAACTTTTTATTTGTAATAA+TGG | - | chr8_2:46123601-46123620 | Msa1250450:intron | 15.0% |
| !!! | AAATCAAATTTTTTGGTTTT+GGG | + | chr8_2:46123866-46123885 | None:intergenic | 15.0% |
| !!! | AAAATCAAATTTTTTGGTTT+TGG | + | chr8_2:46123867-46123886 | None:intergenic | 15.0% |
| !! | GTTATAAACATATAACTTAA+AGG | + | chr8_2:46124317-46124336 | None:intergenic | 15.0% |
| !!! | TTTAATTATTCTTTTTTGTG+CGG | + | chr8_2:46124617-46124636 | None:intergenic | 15.0% |
| !! | GTTAATATATACAAATAAAG+TGG | + | chr8_2:46124708-46124727 | None:intergenic | 15.0% |
| !!! | AATATTTTGAGTTTTTTTAG+AGG | - | chr8_2:46124880-46124899 | Msa1250450:intron | 15.0% |
| !!! | ATATTTTGAGTTTTTTTAGA+GGG | - | chr8_2:46124881-46124900 | Msa1250450:intron | 15.0% |
| !! | GATATAATAATTCAAATTAG+TGG | + | chr8_2:46125977-46125996 | None:intergenic | 15.0% |
| !!! | ATGGTAATAATTTTCTATTA+TGG | + | chr8_2:46126136-46126155 | None:intergenic | 15.0% |
| !! | TAGAAAATTATTACCATAAA+AGG | - | chr8_2:46126139-46126158 | Msa1250450:intron | 15.0% |
| !!! | CCATTATTTGATCTTTTTAT+AGG | + | chr8_2:46120289-46120308 | None:intergenic | 20.0% |
| !! | CCTATAAAAAGATCAAATAA+TGG | - | chr8_2:46120286-46120305 | Msa1250450:CDS | 20.0% |
| !!! | TGATTTGGTAAGAAAATTAA+AGG | - | chr8_2:46120465-46120484 | Msa1250450:CDS | 20.0% |
| !!! | ATTTTTTTTTTTGTTGTTGC+AGG | - | chr8_2:46120542-46120561 | Msa1250450:CDS | 20.0% |
| !! | ATATTTAGTGGCAATTATTA+AGG | + | chr8_2:46121867-46121886 | None:intergenic | 20.0% |
| !!! | AACTTGTTAAGCATAAAAAA+AGG | - | chr8_2:46122005-46122024 | Msa1250450:intron | 20.0% |
| !! | ATAATTAATGAAATGCTAAC+CGG | + | chr8_2:46122141-46122160 | None:intergenic | 20.0% |
| !!! | TATTACATTTTTTTGTCTAG+GGG | - | chr8_2:46122170-46122189 | Msa1250450:intron | 20.0% |
| !!! | TTAAGGAATATTTCTTCTTT+TGG | - | chr8_2:46122458-46122477 | Msa1250450:intron | 20.0% |
| !!! | ACACTACTTTTTTTTATATC+AGG | - | chr8_2:46122514-46122533 | Msa1250450:intron | 20.0% |
| !!! | TTTTCTATCTGTTTCTTTTT+AGG | - | chr8_2:46122665-46122684 | Msa1250450:intron | 20.0% |
| !!! | TCTTTTTAGGAATTTTGTTT+AGG | - | chr8_2:46122678-46122697 | Msa1250450:intron | 20.0% |
| !!! | TATTGTTATACTTTTGTAGA+TGG | - | chr8_2:46122770-46122789 | Msa1250450:intron | 20.0% |
| !!! | ATTGTTATACTTTTGTAGAT+GGG | - | chr8_2:46122771-46122790 | Msa1250450:intron | 20.0% |
| !! | CAGATATTATGAGTTAATAT+TGG | - | chr8_2:46123158-46123177 | Msa1250450:intron | 20.0% |
| !!! | GTTTATTTTTAGAAATGAAG+AGG | - | chr8_2:46123398-46123417 | Msa1250450:intron | 20.0% |
| !!! | TCATTTTTCAAAATAAATGG+AGG | - | chr8_2:46123456-46123475 | Msa1250450:intron | 20.0% |
| !! | AAAAATAAAATACCTAATGG+TGG | + | chr8_2:46123526-46123545 | None:intergenic | 20.0% |
| !!! | TCAATTGAATTTTTTCTATG+AGG | - | chr8_2:46123717-46123736 | Msa1250450:intron | 20.0% |
| !! | AAATCATCTTTCCTTTAAAT+CGG | + | chr8_2:46123983-46124002 | None:intergenic | 20.0% |
| !! | CCTAATTGTATTTACATTTA+AGG | + | chr8_2:46124348-46124367 | None:intergenic | 20.0% |
| !! | CCTTAAATGTAAATACAATT+AGG | - | chr8_2:46124345-46124364 | Msa1250450:intron | 20.0% |
| !! | TAAATGTAAATACAATTAGG+TGG | - | chr8_2:46124348-46124367 | Msa1250450:intron | 20.0% |
| !! | AAAGACTTTATTCATTGTTA+CGG | + | chr8_2:46124830-46124849 | None:intergenic | 20.0% |
| !! | AATTCATATGAATAGCATAA+AGG | - | chr8_2:46124975-46124994 | Msa1250450:intron | 20.0% |
| !!! | CTATACAGATTTTATTGTTT+TGG | - | chr8_2:46125885-46125904 | Msa1250450:intron | 20.0% |
| !! | AAAGATATTGCAATATATAG+AGG | + | chr8_2:46126019-46126038 | None:intergenic | 20.0% |
| !! | TTATTGTTTGATTCAAACAT+AGG | + | chr8_2:46126278-46126297 | None:intergenic | 20.0% |
| !! | GTAACATAGTATTAATTGAA+GGG | + | chr8_2:46126397-46126416 | None:intergenic | 20.0% |
| !! | TGTAACATAGTATTAATTGA+AGG | + | chr8_2:46126398-46126417 | None:intergenic | 20.0% |
| !! | AAACAAATCAATAGTTGATT+AGG | - | chr8_2:46126451-46126470 | Msa1250450:intron | 20.0% |
| !!! | TTTTAACTTTAGTTCTATGA+TGG | + | chr8_2:46126650-46126669 | None:intergenic | 20.0% |
| !!! | GAATTTATGACAAGTTTTTT+CGG | + | chr8_2:46126781-46126800 | None:intergenic | 20.0% |
| !! | CATCTAAATAATTGTATACA+TGG | - | chr8_2:46127700-46127719 | Msa1250450:intron | 20.0% |
| !!! | TTTTTAGATTGTATGTCAAT+CGG | - | chr8_2:46127831-46127850 | Msa1250450:intron | 20.0% |
| !! | TAACGTAAAAGTCATATAAA+TGG | - | chr8_2:46127896-46127915 | Msa1250450:CDS | 20.0% |
| !!! | ATATAAATGGTATTTCTGAT+TGG | - | chr8_2:46127909-46127928 | Msa1250450:CDS | 20.0% |
| ! | CTGTTATAAAATTTGGTAGA+TGG | - | chr8_2:46121437-46121456 | Msa1250450:CDS | 25.0% |
| ! | AGAACAAAACAAGAAAACAA+AGG | - | chr8_2:46121530-46121549 | Msa1250450:CDS | 25.0% |
| ! | CATCATCATCAATGATATTA+TGG | + | chr8_2:46121587-46121606 | None:intergenic | 25.0% |
| ! | AGTAGTGAAAAAATGTTTAG+TGG | + | chr8_2:46121910-46121929 | None:intergenic | 25.0% |
| ! | TAATTAATGAAATGCTAACC+GGG | + | chr8_2:46122140-46122159 | None:intergenic | 25.0% |
| !!! | ATAATTAACTTGTGCCTTAA+GGG | + | chr8_2:46122359-46122378 | None:intergenic | 25.0% |
| !!! | AATAATTAACTTGTGCCTTA+AGG | + | chr8_2:46122360-46122379 | None:intergenic | 25.0% |
| !! | TGTTGGCTGTTATAATTAAT+TGG | + | chr8_2:46122573-46122592 | None:intergenic | 25.0% |
| !!! | AAAGTATCGTCAATAATTGT+TGG | + | chr8_2:46122590-46122609 | None:intergenic | 25.0% |
| ! | TATTACACGTATTCATGAAA+AGG | - | chr8_2:46122618-46122637 | Msa1250450:intron | 25.0% |
| ! | ATTACACGTATTCATGAAAA+GGG | - | chr8_2:46122619-46122638 | Msa1250450:intron | 25.0% |
| ! | AATACAATTAAACAACTCGT+GGG | + | chr8_2:46122743-46122762 | None:intergenic | 25.0% |
| ! | TAATACAATTAAACAACTCG+TGG | + | chr8_2:46122744-46122763 | None:intergenic | 25.0% |
| !! | TCTGTGATTTTTATGTCAAA+TGG | + | chr8_2:46122905-46122924 | None:intergenic | 25.0% |
| !! | TCACATGCTATTTATAGAAA+GGG | + | chr8_2:46122987-46123006 | None:intergenic | 25.0% |
| !! | ATCACATGCTATTTATAGAA+AGG | + | chr8_2:46122988-46123007 | None:intergenic | 25.0% |
| !! | TTTCACATGGACTAATTAAT+AGG | - | chr8_2:46123120-46123139 | Msa1250450:intron | 25.0% |
| ! | AGATGAATAAGTAAACTGTT+CGG | + | chr8_2:46123224-46123243 | None:intergenic | 25.0% |
| ! | TATAAAATAATACATGGTGG+TGG | - | chr8_2:46123310-46123329 | Msa1250450:intron | 25.0% |
| ! | GTAAAGACGCAAAAAAAATT+CGG | + | chr8_2:46123552-46123571 | None:intergenic | 25.0% |
| ! | AGAAAAAATTCAATTGAGAG+TGG | + | chr8_2:46123714-46123733 | None:intergenic | 25.0% |
| ! | CATAGGATTTGAATAAAAAC+AGG | - | chr8_2:46123840-46123859 | Msa1250450:intron | 25.0% |
| ! | ATATAGAATCCAATATGTTG+AGG | - | chr8_2:46124537-46124556 | Msa1250450:intron | 25.0% |
| !! | TTATTTCTCAGACTTACTAT+TGG | - | chr8_2:46124853-46124872 | Msa1250450:intron | 25.0% |
| ! | GCAAAGTTATAACTAAAAAG+TGG | + | chr8_2:46125178-46125197 | None:intergenic | 25.0% |
| ! | ACACCTTCATAAAAATTAGT+TGG | - | chr8_2:46125204-46125223 | Msa1250450:intron | 25.0% |
| !! | ACACCAACTAATTTTTATGA+AGG | + | chr8_2:46125210-46125229 | None:intergenic | 25.0% |
| ! | AAGTAGTTAAATACACCTTA+AGG | + | chr8_2:46125475-46125494 | None:intergenic | 25.0% |
| !! | ACACCTTCTAAAAAATAAGT+GGG | - | chr8_2:46125517-46125536 | Msa1250450:intron | 25.0% |
| !! | ACACCTTCTAAAAAATAAGT+GGG | + | chr8_2:46125517-46125536 | None:intergenic | 25.0% |
| ! | AAGTTGTTAAATACACCTTA+AGG | + | chr8_2:46125621-46125640 | None:intergenic | 25.0% |
| ! | ACACCTTAATAAAAACTAGT+GGG | - | chr8_2:46125664-46125683 | Msa1250450:intron | 25.0% |
| !! | TCAAAAACAGTTTCCTTTTA+TGG | + | chr8_2:46126155-46126174 | None:intergenic | 25.0% |
| ! | AATGGTTAAGGATATGAAAA+AGG | + | chr8_2:46126230-46126249 | None:intergenic | 25.0% |
| !!! | AAGTGACATTCATTTTGAAA+CGG | + | chr8_2:46126333-46126352 | None:intergenic | 25.0% |
| !!! | TTCAAAATGAATGTCACTTT+CGG | - | chr8_2:46126334-46126353 | Msa1250450:intron | 25.0% |
| ! | AATAGTTGATTAGGATACTT+TGG | - | chr8_2:46126460-46126479 | Msa1250450:intron | 25.0% |
| ! | TTACTTAATCTGTATGCAAT+TGG | - | chr8_2:46126517-46126536 | Msa1250450:intron | 25.0% |
| !!! | AAGTTTTTTCGGCATATTTT+TGG | + | chr8_2:46126770-46126789 | None:intergenic | 25.0% |
| ! | TTGTCATAAATTCCTAATGT+GGG | - | chr8_2:46126788-46126807 | Msa1250450:intron | 25.0% |
| ! | TGCTGAAAGAAATGAAAAAT+TGG | + | chr8_2:46126969-46126988 | None:intergenic | 25.0% |
| ! | ATATAAGGAAAGTTGAACAA+AGG | + | chr8_2:46127217-46127236 | None:intergenic | 25.0% |
| !! | AACTTTCCTTATATTTTTCC+AGG | - | chr8_2:46127223-46127242 | Msa1250450:CDS | 25.0% |
| ! | TTGATGAAACTGTAATCATT+TGG | + | chr8_2:46127251-46127270 | None:intergenic | 25.0% |
| !!! | GTAGTTTTGAGTAATTTTGA+AGG | + | chr8_2:46127329-46127348 | None:intergenic | 25.0% |
| !! | TTTTCAAACGAAAGAACAAA+TGG | + | chr8_2:46127407-46127426 | None:intergenic | 25.0% |
| ! | ATATAATTGCTGAGAGAATA+AGG | - | chr8_2:46127579-46127598 | Msa1250450:intron | 25.0% |
| !! | TTGAAAAATGAACCTTTTTG+AGG | + | chr8_2:46127655-46127674 | None:intergenic | 25.0% |
| !! | AGCATTGTTTAATTTCGATA+CGG | + | chr8_2:46128099-46128118 | None:intergenic | 25.0% |
| ! | TATAGAGAAATAGAGAAACT+TGG | - | chr8_2:46128447-46128466 | Msa1250450:five_prime_UTR | 25.0% |
| TCATTACACAAGTGTCATAA+TGG | - | chr8_2:46120387-46120406 | Msa1250450:CDS | 30.0% | |
| !!! | TTTTTTGTTGTTGCAGGAAA+TGG | - | chr8_2:46120548-46120567 | Msa1250450:CDS | 30.0% |
| ! | TGAACTCAAACATTGTTGTT+GGG | + | chr8_2:46120655-46120674 | None:intergenic | 30.0% |
| !!! | ACTTTTGACTCTTTTGACTT+TGG | - | chr8_2:46120720-46120739 | Msa1250450:intron | 30.0% |
| AAAGATGAGTTAGATGATGA+TGG | + | chr8_2:46120831-46120850 | None:intergenic | 30.0% | |
| !!! | CTGTTTTGACTTTGAGTTTA+AGG | + | chr8_2:46120934-46120953 | None:intergenic | 30.0% |
| ACATGAATGTTTCTCATTTG+GGG | + | chr8_2:46120981-46121000 | None:intergenic | 30.0% | |
| GACATGAATGTTTCTCATTT+GGG | + | chr8_2:46120982-46121001 | None:intergenic | 30.0% | |
| AGACATGAATGTTTCTCATT+TGG | + | chr8_2:46120983-46121002 | None:intergenic | 30.0% | |
| TCTCAACTCAAAATCCTAAA+GGG | - | chr8_2:46121000-46121019 | Msa1250450:intron | 30.0% | |
| !!! | TGTTGCAAAGTTTTGAGTTT+TGG | + | chr8_2:46121030-46121049 | None:intergenic | 30.0% |
| CAAAAACATCTCAAACCAAA+AGG | - | chr8_2:46121048-46121067 | Msa1250450:intron | 30.0% | |
| TAAAATTTGGTAGATGGACA+AGG | - | chr8_2:46121443-46121462 | Msa1250450:CDS | 30.0% | |
| !!! | TAAAAAGCGTTTGGAAGTTT+TGG | - | chr8_2:46121506-46121525 | Msa1250450:CDS | 30.0% |
| TCATCAATGATATTATGGTC+TGG | + | chr8_2:46121582-46121601 | None:intergenic | 30.0% | |
| !! | TCATATGATGAGAGTATTGA+AGG | - | chr8_2:46121630-46121649 | Msa1250450:intron | 30.0% |
| AGCAATGATAGTAATGTCAA+TGG | + | chr8_2:46121820-46121839 | None:intergenic | 30.0% | |
| TTAGTGGCAATTATTAAGGT+AGG | + | chr8_2:46121863-46121882 | None:intergenic | 30.0% | |
| AATATCATTAATCAATGCCC+CGG | - | chr8_2:46122119-46122138 | Msa1250450:intron | 30.0% | |
| AATTAATGAAATGCTAACCG+GGG | + | chr8_2:46122139-46122158 | None:intergenic | 30.0% | |
| !!! | AACATTGATTTTGAAAGCGA+GGG | + | chr8_2:46122217-46122236 | None:intergenic | 30.0% |
| !!! | ATTTTTTAACATGTGCCCTA+AGG | - | chr8_2:46122481-46122500 | Msa1250450:intron | 30.0% |
| AGGAATATGTTCATTTCACA+TGG | - | chr8_2:46123107-46123126 | Msa1250450:intron | 30.0% | |
| ! | AAGATCTTTGTTATATGCAG+AGG | - | chr8_2:46123184-46123203 | Msa1250450:intron | 30.0% |
| ATGAATAAGTAAACTGTTCG+GGG | + | chr8_2:46123222-46123241 | None:intergenic | 30.0% | |
| GATGAATAAGTAAACTGTTC+GGG | + | chr8_2:46123223-46123242 | None:intergenic | 30.0% | |
| TGAACGCAAAAAGTAGAAAT+TGG | + | chr8_2:46123355-46123374 | None:intergenic | 30.0% | |
| ATCCTAACTCGTTAAAATAG+TGG | - | chr8_2:46123421-46123440 | Msa1250450:intron | 30.0% | |
| AAATGGAGGATATCATTTAG+AGG | - | chr8_2:46123470-46123489 | Msa1250450:intron | 30.0% | |
| AATGGAGGATATCATTTAGA+GGG | - | chr8_2:46123471-46123490 | Msa1250450:intron | 30.0% | |
| ATAAAATACCTAATGGTGGT+CGG | + | chr8_2:46123522-46123541 | None:intergenic | 30.0% | |
| TCGATTAGTACAAGTAGTAA+AGG | + | chr8_2:46123784-46123803 | None:intergenic | 30.0% | |
| TTACTACTTGTACTAATCGA+TGG | - | chr8_2:46123784-46123803 | Msa1250450:intron | 30.0% | |
| AATCCTATGACAAGTAGTAA+AGG | + | chr8_2:46123829-46123848 | None:intergenic | 30.0% | |
| ! | ACGAATTAACATTCGATTTG+TGG | - | chr8_2:46124057-46124076 | Msa1250450:intron | 30.0% |
| TAGAAGATAAGACTCTCATT+TGG | - | chr8_2:46124117-46124136 | Msa1250450:intron | 30.0% | |
| CACTCTATAAGATAAACAAG+TGG | + | chr8_2:46124165-46124184 | None:intergenic | 30.0% | |
| ATAACTTAAAGGATCACGAA+AGG | + | chr8_2:46124306-46124325 | None:intergenic | 30.0% | |
| AAATGTAAATGACCATAACC+AGG | - | chr8_2:46124401-46124420 | Msa1250450:intron | 30.0% | |
| AATGTAAATGACCATAACCA+GGG | - | chr8_2:46124402-46124421 | Msa1250450:intron | 30.0% | |
| TGAATTGGAAGAAAAAAGAG+TGG | - | chr8_2:46124570-46124589 | Msa1250450:intron | 30.0% | |
| TTGCTAAAAGACACCTTTAT+GGG | + | chr8_2:46125133-46125152 | None:intergenic | 30.0% | |
| ! | CACACCTTCTAAAAAATAAG+TGG | - | chr8_2:46125516-46125535 | Msa1250450:intron | 30.0% |
| !!! | ACACCCACTTATTTTTTAGA+AGG | + | chr8_2:46125576-46125595 | None:intergenic | 30.0% |
| !!! | ACACCCACTTATTTTTTAGA+AGG | - | chr8_2:46125576-46125595 | Msa1250450:intron | 30.0% |
| ! | CACACCTTCTAAAAAATAAG+TGG | + | chr8_2:46125516-46125535 | None:intergenic | 30.0% |
| ! | TTTTAGCAACATTCACCTTA+AGG | - | chr8_2:46125603-46125622 | Msa1250450:intron | 30.0% |
| CACACCTTAATAAAAACTAG+TGG | - | chr8_2:46125663-46125682 | Msa1250450:intron | 30.0% | |
| !!! | ACACCCACTAGTTTTTATTA+AGG | + | chr8_2:46125670-46125689 | None:intergenic | 30.0% |
| ! | ATATATATATGGGGTTTGCT+AGG | + | chr8_2:46125695-46125714 | None:intergenic | 30.0% |
| TTTCAAGAGACATAGGAATT+AGG | - | chr8_2:46125768-46125787 | Msa1250450:intron | 30.0% | |
| ! | AAGAGTATACAGAAAGAAGA+GGG | - | chr8_2:46125791-46125810 | Msa1250450:intron | 30.0% |
| TGTCGTTGCTTAGAAAAATT+GGG | + | chr8_2:46126093-46126112 | None:intergenic | 30.0% | |
| TTGTCGTTGCTTAGAAAAAT+TGG | + | chr8_2:46126094-46126113 | None:intergenic | 30.0% | |
| GCAACGACAAATCATAATAT+TGG | - | chr8_2:46126104-46126123 | Msa1250450:intron | 30.0% | |
| CTTGTCATAAATTCCTAATG+TGG | - | chr8_2:46126787-46126806 | Msa1250450:intron | 30.0% | |
| ! | CTTTCAGCATAATTGATTCT+TGG | - | chr8_2:46126980-46126999 | Msa1250450:intron | 30.0% |
| TAACAAGCATATGACTTCAA+TGG | - | chr8_2:46127015-46127034 | Msa1250450:CDS | 30.0% | |
| TTGGTTCCTGGAAAAATATA+AGG | + | chr8_2:46127232-46127251 | None:intergenic | 30.0% | |
| GTTTAGAGAGTAACTTAGAA+AGG | - | chr8_2:46127303-46127322 | Msa1250450:CDS | 30.0% | |
| ! | ATTCTTTGAGTTCACAACTT+TGG | + | chr8_2:46127477-46127496 | None:intergenic | 30.0% |
| AAAGTTGTGAACTCAAAGAA+TGG | - | chr8_2:46127476-46127495 | Msa1250450:intron | 30.0% | |
| !!! | CTTTTTGAGGTTTGGAATAA+GGG | + | chr8_2:46127642-46127661 | None:intergenic | 30.0% |
| !!! | AAATGAACCTTTTTGAGGTT+TGG | + | chr8_2:46127650-46127669 | None:intergenic | 30.0% |
| TGATGCTATAAAGTATGTGA+AGG | - | chr8_2:46128167-46128186 | Msa1250450:CDS | 30.0% | |
| ! | AATGCTAGTTCGTTTTCATT+TGG | - | chr8_2:46128483-46128502 | Msa1250450:five_prime_UTR | 30.0% |
| ! | TTTCAAGCTTTGTGCTGAAT+TGG | + | chr8_2:46120317-46120336 | None:intergenic | 35.0% |
| ! | AAGTGTTGTTCCTTCAAACA+GGG | + | chr8_2:46120368-46120387 | None:intergenic | 35.0% |
| GTTTCTTCTGATACGTTCAT+TGG | + | chr8_2:46120430-46120449 | None:intergenic | 35.0% | |
| TATCAGAAGAAACCAGCAAA+TGG | - | chr8_2:46120437-46120456 | Msa1250450:CDS | 35.0% | |
| !! | AAGTTTAGGTTGCATTCTTC+AGG | + | chr8_2:46120591-46120610 | None:intergenic | 35.0% |
| CATTAGCATCAAGGAAGTTT+AGG | + | chr8_2:46120605-46120624 | None:intergenic | 35.0% | |
| AAACTTCCTTGATGCTAATG+AGG | - | chr8_2:46120605-46120624 | Msa1250450:CDS | 35.0% | |
| CTGAACTCAAACATTGTTGT+TGG | + | chr8_2:46120656-46120675 | None:intergenic | 35.0% | |
| TGTTTCATCAGTGAATGAGT+TGG | + | chr8_2:46120700-46120719 | None:intergenic | 35.0% | |
| ! | AACAATTGTTTTCAGCTCCA+TGG | + | chr8_2:46120766-46120785 | None:intergenic | 35.0% |
| !! | TGGAGAAAGTTTTGGTGAAA+TGG | + | chr8_2:46120811-46120830 | None:intergenic | 35.0% |
| !!! | GATGATGATGGAGAAAGTTT+TGG | + | chr8_2:46120819-46120838 | None:intergenic | 35.0% |
| ! | TTTGACTTTGAGTTTAAGGC+AGG | + | chr8_2:46120930-46120949 | None:intergenic | 35.0% |
| GTCTCAACTCAAAATCCTAA+AGG | - | chr8_2:46120999-46121018 | Msa1250450:intron | 35.0% | |
| !!! | TGAGTTTTGGATAACCCTTT+AGG | + | chr8_2:46121017-46121036 | None:intergenic | 35.0% |
| TCTTGTTCCTAACCTGAAAA+AGG | - | chr8_2:46121154-46121173 | Msa1250450:intron | 35.0% | |
| !!! | AGTGTTACCTTTTTCAGGTT+AGG | + | chr8_2:46121164-46121183 | None:intergenic | 35.0% |
| !! | TGTGAAGTGTTACCTTTTTC+AGG | + | chr8_2:46121169-46121188 | None:intergenic | 35.0% |
| CACTTCACACTTATGTTTGA+AGG | - | chr8_2:46121180-46121199 | Msa1250450:CDS | 35.0% | |
| AATGTGTATTAGTGTCGTGT+TGG | + | chr8_2:46121235-46121254 | None:intergenic | 35.0% | |
| !! | TTGAGTGCTATTTAGCTAGT+GGG | + | chr8_2:46121365-46121384 | None:intergenic | 35.0% |
| !! | TTTGAGTGCTATTTAGCTAG+TGG | + | chr8_2:46121366-46121385 | None:intergenic | 35.0% |
| !! | GAAAGAGCTTAAAAAGCGTT+TGG | - | chr8_2:46121497-46121516 | Msa1250450:CDS | 35.0% |
| TGACATTACTATCATTGCTC+AGG | - | chr8_2:46121821-46121840 | Msa1250450:intron | 35.0% | |
| TACTATCATTGCTCAGGTAA+AGG | - | chr8_2:46121827-46121846 | Msa1250450:intron | 35.0% | |
| ATTATTAGGGTCATGCTAAC+CGG | - | chr8_2:46121972-46121991 | Msa1250450:intron | 35.0% | |
| TAACAAGTTTCTCAGAGTAC+CGG | + | chr8_2:46121994-46122013 | None:intergenic | 35.0% | |
| !!! | CAACATTGATTTTGAAAGCG+AGG | + | chr8_2:46122218-46122237 | None:intergenic | 35.0% |
| !! | AATGTTAACTTGTGCCCTTA+AGG | - | chr8_2:46122342-46122361 | Msa1250450:intron | 35.0% |
| !! | AGTGTTAACTTGTGTCCTTA+GGG | + | chr8_2:46122499-46122518 | None:intergenic | 35.0% |
| !! | TAGTGTTAACTTGTGTCCTT+AGG | + | chr8_2:46122500-46122519 | None:intergenic | 35.0% |
| ! | ATACTTTTGTAGATGGGTGA+AGG | - | chr8_2:46122777-46122796 | Msa1250450:intron | 35.0% |
| ! | TACTTTTGTAGATGGGTGAA+GGG | - | chr8_2:46122778-46122797 | Msa1250450:intron | 35.0% |
| CATCAAAGCATGAATGAACA+AGG | - | chr8_2:46122862-46122881 | Msa1250450:intron | 35.0% | |
| !!! | CTCCACTATTTTAACGAGTT+AGG | + | chr8_2:46123426-46123445 | None:intergenic | 35.0% |
| ! | ACTCGTTAAAATAGTGGAGA+AGG | - | chr8_2:46123427-46123446 | Msa1250450:intron | 35.0% |
| CATCCTTTACTACTTGTCAT+AGG | - | chr8_2:46123823-46123842 | Msa1250450:intron | 35.0% | |
| ! | ATCGTTTGAGTTTCCTAATC+TGG | + | chr8_2:46123907-46123926 | None:intergenic | 35.0% |
| AAGGTTCAAGCAAGTTAACA+CGG | + | chr8_2:46123951-46123970 | None:intergenic | 35.0% | |
| ! | GACCTCCATTTTCATAAGAA+CGG | + | chr8_2:46124428-46124447 | None:intergenic | 35.0% |
| !!! | TTCTTTTTTGTGCGGATTTG+AGG | + | chr8_2:46124609-46124628 | None:intergenic | 35.0% |
| AAAGATATAGAAACCCAAGC+TGG | - | chr8_2:46124646-46124665 | Msa1250450:intron | 35.0% | |
| GTATTTCATATCCATAGACG+TGG | + | chr8_2:46124682-46124701 | None:intergenic | 35.0% | |
| !!! | GAGCTGGGTCTTTAAAATTT+TGG | + | chr8_2:46124770-46124789 | None:intergenic | 35.0% |
| TGTTTGCACTCCTTCAAAAT+CGG | - | chr8_2:46124798-46124817 | Msa1250450:intron | 35.0% | |
| ! | ACTTGCACCTTAGTGTTTTT+AGG | - | chr8_2:46125017-46125036 | Msa1250450:intron | 35.0% |
| ACACCAACCTAAAAACACTA+AGG | + | chr8_2:46125027-46125046 | None:intergenic | 35.0% | |
| GTTGCTAAAAGACACCTTTA+TGG | + | chr8_2:46125134-46125153 | None:intergenic | 35.0% | |
| ACACCCACTAGTATTTATGT+GGG | - | chr8_2:46125430-46125449 | Msa1250450:intron | 35.0% | |
| ACTCCCACATAAATACTAGT+GGG | + | chr8_2:46125436-46125455 | None:intergenic | 35.0% | |
| ! | TTTTAGCAAGCTACACCTTA+AGG | - | chr8_2:46125457-46125476 | Msa1250450:intron | 35.0% |
| TGTATGTTAGCAACTCCTAT+AGG | + | chr8_2:46125559-46125578 | None:intergenic | 35.0% | |
| GAATGTGTTTCAAGAGACAT+AGG | - | chr8_2:46125761-46125780 | Msa1250450:intron | 35.0% | |
| ! | GAAGAGTATACAGAAAGAAG+AGG | - | chr8_2:46125790-46125809 | Msa1250450:intron | 35.0% |
| TCTTAGTCCAAGGAATTTGT+AGG | - | chr8_2:46125818-46125837 | Msa1250450:intron | 35.0% | |
| TATTAACCGCGTTATGTTCA+TGG | - | chr8_2:46126038-46126057 | Msa1250450:intron | 35.0% | |
| TAGTTTCCATGAACATAACG+CGG | + | chr8_2:46126047-46126066 | None:intergenic | 35.0% | |
| CAAACATAGGAAATGCTAAC+TGG | + | chr8_2:46126265-46126284 | None:intergenic | 35.0% | |
| !!! | GACATTCATTTTGAAACGGA+GGG | + | chr8_2:46126329-46126348 | None:intergenic | 35.0% |
| !!! | TGACATTCATTTTGAAACGG+AGG | + | chr8_2:46126330-46126349 | None:intergenic | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+TGG | - | chr8_2:46126543-46126562 | Msa1250450:intron | 35.0% |
| AGTAACTAGGGAATGTTTCA+TGG | + | chr8_2:46126622-46126641 | None:intergenic | 35.0% | |
| ! | ATGATGGTAGTGAGTAACTA+GGG | + | chr8_2:46126634-46126653 | None:intergenic | 35.0% |
| ! | TATGATGGTAGTGAGTAACT+AGG | + | chr8_2:46126635-46126654 | None:intergenic | 35.0% |
| ATGGATTTGGAAATGAGTGA+GGG | + | chr8_2:46126735-46126754 | None:intergenic | 35.0% | |
| ATATAAACAGCACCCACATT+AGG | + | chr8_2:46126803-46126822 | None:intergenic | 35.0% | |
| !! | GGTGCTGTTTATATGAATGA+AGG | - | chr8_2:46126809-46126828 | Msa1250450:intron | 35.0% |
| ATGAAATTTATTACCTCCCC+TGG | + | chr8_2:46126892-46126911 | None:intergenic | 35.0% | |
| GACTAATTGGTTGTGTGATA+TGG | - | chr8_2:46127048-46127067 | Msa1250450:CDS | 35.0% | |
| ! | AACTGTAATCATTTGGTTCC+TGG | + | chr8_2:46127244-46127263 | None:intergenic | 35.0% |
| !!! | AACTTTGGTTTTTGACCTCA+AGG | + | chr8_2:46127462-46127481 | None:intergenic | 35.0% |
| ACCAAGACGTGTAAAAAATC+AGG | - | chr8_2:46127499-46127518 | Msa1250450:intron | 35.0% | |
| !!! | TCCTGATTTTTTACACGTCT+TGG | + | chr8_2:46127503-46127522 | None:intergenic | 35.0% |
| TGTGTGATGAGTTGTAGATT+TGG | + | chr8_2:46127552-46127571 | None:intergenic | 35.0% | |
| CTCTCAGCAATTATATGATC+TGG | + | chr8_2:46127575-46127594 | None:intergenic | 35.0% | |
| !!! | CCTTTTTGAGGTTTGGAATA+AGG | + | chr8_2:46127643-46127662 | None:intergenic | 35.0% |
| CCTTATTCCAAACCTCAAAA+AGG | - | chr8_2:46127640-46127659 | Msa1250450:intron | 35.0% | |
| GTACTCCATATGTTTGTAGA+TGG | - | chr8_2:46128125-46128144 | Msa1250450:CDS | 35.0% | |
| CTTGTCCATCTACAAACATA+TGG | + | chr8_2:46128133-46128152 | None:intergenic | 35.0% | |
| CATATGTTTGTAGATGGACA+AGG | - | chr8_2:46128131-46128150 | Msa1250450:CDS | 35.0% | |
| AAAGTATGTGAAGGAGCTTA+AGG | - | chr8_2:46128176-46128195 | Msa1250450:CDS | 35.0% | |
| ! | CAAAAGCAAAAGTGTAGAAC+CGG | - | chr8_2:46128227-46128246 | Msa1250450:CDS | 35.0% |
| CATTTCTTCACAACTGTAAC+CGG | + | chr8_2:46128249-46128268 | None:intergenic | 35.0% | |
| ACTTCCTCGAATTCATGTAA+CGG | - | chr8_2:46128303-46128322 | Msa1250450:intron | 35.0% | |
| ! | AAGTTGAAGCTAGTTTGTCA+GGG | - | chr8_2:46128367-46128386 | Msa1250450:CDS | 35.0% |
| AATCCTCTGTGAGAAAGATA+AGG | - | chr8_2:46128407-46128426 | Msa1250450:CDS | 35.0% | |
| AATAGAGAAACTTGGTCTCT+TGG | - | chr8_2:46128455-46128474 | Msa1250450:five_prime_UTR | 35.0% | |
| AAAATGTACCTGAGCAATGA+TGG | + | chr8_2:46128529-46128548 | None:intergenic | 35.0% | |
| !! | GAAGTGTTGTTCCTTCAAAC+AGG | + | chr8_2:46120369-46120388 | None:intergenic | 40.0% |
| CAAATCAGAAAGCCATTTGC+TGG | + | chr8_2:46120452-46120471 | None:intergenic | 40.0% | |
| CAGCAAATGGCTTTCTGATT+TGG | - | chr8_2:46120450-46120469 | Msa1250450:CDS | 40.0% | |
| ACTCTTCCTCATTAGCATCA+AGG | + | chr8_2:46120614-46120633 | None:intergenic | 40.0% | |
| ! | TGTTGTTGGGTTTGTTCTTG+TGG | + | chr8_2:46120642-46120661 | None:intergenic | 40.0% |
| !! | GTTGGTGATAGTTGTGGAAT+TGG | + | chr8_2:46120682-46120701 | None:intergenic | 40.0% |
| !! | GAATGAGTTGGTGATAGTTG+TGG | + | chr8_2:46120688-46120707 | None:intergenic | 40.0% |
| TGAAATTGAGAGACCAACCA+TGG | - | chr8_2:46120746-46120765 | Msa1250450:intron | 40.0% | |
| ! | ATTGTTTTCAGCTCCATGGT+TGG | + | chr8_2:46120762-46120781 | None:intergenic | 40.0% |
| ! | TGTTGGTAGGAGGAGAATTT+GGG | + | chr8_2:46120884-46120903 | None:intergenic | 40.0% |
| TGAATGTTTCTCATTTGGGG+TGG | + | chr8_2:46120978-46120997 | None:intergenic | 40.0% | |
| TTCAGCCATGATATGGTCAT+CGG | + | chr8_2:46121087-46121106 | None:intergenic | 40.0% | |
| GCTTTCTTTCAGCCATGATA+TGG | + | chr8_2:46121094-46121113 | None:intergenic | 40.0% | |
| TTACTGTCGATGTTGTGTCT+TGG | - | chr8_2:46121304-46121323 | Msa1250450:intron | 40.0% | |
| !! | TGAGTGCTATTTAGCTAGTG+GGG | + | chr8_2:46121364-46121383 | None:intergenic | 40.0% |
| TGGTTTCTTCAGAACAACCA+CGG | + | chr8_2:46121562-46121581 | None:intergenic | 40.0% | |
| ! | CACTTTTGCTTGCACTTGAA+AGG | + | chr8_2:46121670-46121689 | None:intergenic | 40.0% |
| !! | AAGTGCAAGCAAAAGTGTCA+GGG | - | chr8_2:46121673-46121692 | Msa1250450:intron | 40.0% |
| AATAGCAGTGTCTTACCCTT+TGG | - | chr8_2:46121789-46121808 | Msa1250450:intron | 40.0% | |
| ATAGCAGTGTCTTACCCTTT+GGG | - | chr8_2:46121790-46121809 | Msa1250450:intron | 40.0% | |
| ATGTCAATGGAATCCCCAAA+GGG | + | chr8_2:46121807-46121826 | None:intergenic | 40.0% | |
| AATGTCAATGGAATCCCCAA+AGG | + | chr8_2:46121808-46121827 | None:intergenic | 40.0% | |
| ACACGTATTCATGAAAAGGG+AGG | - | chr8_2:46122622-46122641 | Msa1250450:intron | 40.0% | |
| CACGTATTCATGAAAAGGGA+GGG | - | chr8_2:46122623-46122642 | Msa1250450:intron | 40.0% | |
| AGGGTACAACTTGAGCATAA+AGG | - | chr8_2:46122797-46122816 | Msa1250450:intron | 40.0% | |
| TAGAAAGGGTTTGCATTCTC+AGG | + | chr8_2:46122973-46122992 | None:intergenic | 40.0% | |
| !! | ATGGTGGTGGAATTCATTAG+TGG | - | chr8_2:46123323-46123342 | Msa1250450:intron | 40.0% |
| TAGAAAATCCGACCACCATT+AGG | - | chr8_2:46123511-46123530 | Msa1250450:intron | 40.0% | |
| ! | AAGTTTTCATCGCCGTTTAG+CGG | - | chr8_2:46123648-46123667 | Msa1250450:intron | 40.0% |
| GAAACGAATCTCCATCCTTT+GGG | - | chr8_2:46123670-46123689 | Msa1250450:intron | 40.0% | |
| CACGGCGTAAAATAAACTCA+CGG | + | chr8_2:46123933-46123952 | None:intergenic | 40.0% | |
| GTGTGGAAATCGTGTTAACT+CGG | + | chr8_2:46124011-46124030 | None:intergenic | 40.0% | |
| ! | TCGAACAAGTTGACGTTCTT+AGG | + | chr8_2:46124033-46124052 | None:intergenic | 40.0% |
| CCAAACTCTCCTCAACATAT+TGG | + | chr8_2:46124549-46124568 | None:intergenic | 40.0% | |
| CCAATATGTTGAGGAGAGTT+TGG | - | chr8_2:46124546-46124565 | Msa1250450:intron | 40.0% | |
| TGAGGAGAGTTTGGATGAAT+TGG | - | chr8_2:46124555-46124574 | Msa1250450:intron | 40.0% | |
| GTTTGCACTCCTTCAAAATC+GGG | - | chr8_2:46124799-46124818 | Msa1250450:intron | 40.0% | |
| !!! | GCACCTTAGTGTTTTTAGGT+TGG | - | chr8_2:46125021-46125040 | Msa1250450:intron | 40.0% |
| CTAAAAGACACCTTTATGGG+TGG | + | chr8_2:46125130-46125149 | None:intergenic | 40.0% | |
| CACACCCACTAGTATTTATG+TGG | - | chr8_2:46125429-46125448 | Msa1250450:intron | 40.0% | |
| CACTCCCACATAAATACTAG+TGG | + | chr8_2:46125437-46125456 | None:intergenic | 40.0% | |
| GTATCCTAGCAAATGCCTAT+AGG | - | chr8_2:46125541-46125560 | Msa1250450:intron | 40.0% | |
| AACTCCTATAGGCATTTGCT+AGG | + | chr8_2:46125548-46125567 | None:intergenic | 40.0% | |
| TCAGATGCCTACAAATTCCT+TGG | + | chr8_2:46125828-46125847 | None:intergenic | 40.0% | |
| ! | ATTTGTAGGCATCTGAGATG+AGG | - | chr8_2:46125832-46125851 | Msa1250450:intron | 40.0% |
| ! | GATGGATTTGGAAATGAGTG+AGG | + | chr8_2:46126736-46126755 | None:intergenic | 40.0% |
| ! | TTTTTGGATGTGAGGACAGA+TGG | + | chr8_2:46126754-46126773 | None:intergenic | 40.0% |
| !!! | TCGGCATATTTTTGGATGTG+AGG | + | chr8_2:46126762-46126781 | None:intergenic | 40.0% |
| CAAGCATATGACTTCAATGG+AGG | - | chr8_2:46127018-46127037 | Msa1250450:CDS | 40.0% | |
| TGACTTCAATGGAGGAATCA+TGG | - | chr8_2:46127026-46127045 | Msa1250450:CDS | 40.0% | |
| ! | TGGAGGAATCATGGACTAAT+TGG | - | chr8_2:46127035-46127054 | Msa1250450:CDS | 40.0% |
| CGTTCAATCGATGATGTTTG+TGG | - | chr8_2:46127124-46127143 | Msa1250450:CDS | 40.0% | |
| CAACCAATCAAGCATAAACG+CGG | - | chr8_2:46127268-46127287 | Msa1250450:CDS | 40.0% | |
| TTTCCGCGTTTATGCTTGAT+TGG | + | chr8_2:46127274-46127293 | None:intergenic | 40.0% | |
| AGCATAAACGCGGAAATTGT+TGG | - | chr8_2:46127278-46127297 | Msa1250450:CDS | 40.0% | |
| !! | AAGGTTGGTACAACCTTCAT+TGG | + | chr8_2:46127443-46127462 | None:intergenic | 40.0% |
| !! | TTGGTTTTTGACCTCAAGGT+TGG | + | chr8_2:46127458-46127477 | None:intergenic | 40.0% |
| CTGAAAGAGCTATGAACTGT+TGG | + | chr8_2:46127619-46127638 | None:intergenic | 40.0% | |
| ! | TCTGATTGGTTGACACAGTA+AGG | - | chr8_2:46127923-46127942 | Msa1250450:CDS | 40.0% |
| TATAGCATCACCCAATACTG+AGG | + | chr8_2:46128157-46128176 | None:intergenic | 40.0% | |
| ! | TAAGGAGCAAGTGAAAGTGT+TGG | - | chr8_2:46128194-46128213 | Msa1250450:CDS | 40.0% |
| CGGTTACAGTTGTGAAGAAA+TGG | - | chr8_2:46128247-46128266 | Msa1250450:CDS | 40.0% | |
| GTTTCCGTTACATGAATTCG+AGG | + | chr8_2:46128310-46128329 | None:intergenic | 40.0% | |
| ! | GACAAACTAGCTTCAACTTC+AGG | + | chr8_2:46128366-46128385 | None:intergenic | 40.0% |
| ! | GAAGTTGAAGCTAGTTTGTC+AGG | - | chr8_2:46128366-46128385 | Msa1250450:CDS | 40.0% |
| TACCTGAGCAATGATGGTTA+TGG | + | chr8_2:46128523-46128542 | None:intergenic | 40.0% | |
| TCTCACTCTTCCCTGTTTGA+AGG | - | chr8_2:46120355-46120374 | Msa1250450:CDS | 45.0% | |
| ! | GTGTTGGTAGGAGGAGAATT+TGG | + | chr8_2:46120885-46120904 | None:intergenic | 45.0% |
| AGGAGTGAGTCCACAAAACT+GGG | + | chr8_2:46120910-46120929 | None:intergenic | 45.0% | |
| CTGCAAGAGCAATGAAGCTT+TGG | + | chr8_2:46121133-46121152 | None:intergenic | 45.0% | |
| GAAAACAAAGGTAGAGTCCG+TGG | - | chr8_2:46121542-46121561 | Msa1250450:intron | 45.0% | |
| !! | CAAGTGCAAGCAAAAGTGTC+AGG | - | chr8_2:46121672-46121691 | Msa1250450:intron | 45.0% |
| ! | CAGGGAAAGAGATGCTGATT+CGG | - | chr8_2:46121691-46121710 | Msa1250450:intron | 45.0% |
| ! | ATTCACTGCCAGAAGCACAA+GGG | - | chr8_2:46121714-46121733 | Msa1250450:intron | 45.0% |
| TAGCAGTGTCTTACCCTTTG+GGG | - | chr8_2:46121791-46121810 | Msa1250450:intron | 45.0% | |
| GGTCATCTGAGTGACACATT+TGG | + | chr8_2:46122196-46122215 | None:intergenic | 45.0% | |
| !! | GGGAGGGCGTATTTTATTCT+AGG | - | chr8_2:46122639-46122658 | Msa1250450:intron | 45.0% |
| ACTTGTCAAGAACCTACGCA+TGG | - | chr8_2:46122821-46122840 | Msa1250450:intron | 45.0% | |
| GTCACTCTAGTTGAGATCGT+AGG | - | chr8_2:46123087-46123106 | Msa1250450:intron | 45.0% | |
| GGAGATTCGTTTCCGCTAAA+CGG | + | chr8_2:46123663-46123682 | None:intergenic | 45.0% | |
| GGAAACGAATCTCCATCCTT+TGG | - | chr8_2:46123669-46123688 | Msa1250450:intron | 45.0% | |
| ACATTGTGTGTCCCAAAGGA+TGG | + | chr8_2:46123684-46123703 | None:intergenic | 45.0% | |
| !! | TCCTTTGGGACACACAATGT+AGG | - | chr8_2:46123684-46123703 | Msa1250450:intron | 45.0% |
| ACCTACATTGTGTGTCCCAA+AGG | + | chr8_2:46123688-46123707 | None:intergenic | 45.0% | |
| AAAGGTGAACTCGCCAGATT+AGG | - | chr8_2:46123891-46123910 | Msa1250450:intron | 45.0% | |
| TTTAAATCGGAACGCGTGGA+AGG | + | chr8_2:46123970-46123989 | None:intergenic | 45.0% | |
| TTCCACGCGTTCCGATTTAA+AGG | - | chr8_2:46123969-46123988 | Msa1250450:intron | 45.0% | |
| TTCCTTTAAATCGGAACGCG+TGG | + | chr8_2:46123974-46123993 | None:intergenic | 45.0% | |
| TGGAAATCGTGTTAACTCGG+AGG | + | chr8_2:46124008-46124027 | None:intergenic | 45.0% | |
| ! | CAAGTTGACGTTCTTAGGTG+TGG | + | chr8_2:46124028-46124047 | None:intergenic | 45.0% |
| ! | CATTTTCATAAGAACGGCCC+TGG | + | chr8_2:46124422-46124441 | None:intergenic | 45.0% |
| CAGGGCCGTTCTTATGAAAA+TGG | - | chr8_2:46124420-46124439 | Msa1250450:intron | 45.0% | |
| GGCCGTTCTTATGAAAATGG+AGG | - | chr8_2:46124423-46124442 | Msa1250450:intron | 45.0% | |
| ATAGAAACCCAAGCTGGAAC+CGG | - | chr8_2:46124652-46124671 | Msa1250450:intron | 45.0% | |
| GCAAACAACTCTACTGAGCT+GGG | + | chr8_2:46124785-46124804 | None:intergenic | 45.0% | |
| TGCAAACAACTCTACTGAGC+TGG | + | chr8_2:46124786-46124805 | None:intergenic | 45.0% | |
| TTGCTAGAAGCCACCCATAA+AGG | - | chr8_2:46125117-46125136 | Msa1250450:intron | 45.0% | |
| ! | TTTTAGCAACCCACACCTCA+AGG | - | chr8_2:46125144-46125163 | Msa1250450:intron | 45.0% |
| AAAGTGGAAATCACGCCTTG+AGG | + | chr8_2:46125162-46125181 | None:intergenic | 45.0% | |
| AGAGGGAGAATCTTAGTCCA+AGG | - | chr8_2:46125808-46125827 | Msa1250450:intron | 45.0% | |
| CATATCCTTAACCATTGCCC+CGG | - | chr8_2:46126234-46126253 | Msa1250450:intron | 45.0% | |
| ATATCCTTAACCATTGCCCC+GGG | - | chr8_2:46126235-46126254 | Msa1250450:intron | 45.0% | |
| ! | GATGTGAGGACAGATGGATT+TGG | + | chr8_2:46126748-46126767 | None:intergenic | 45.0% |
| GTTGGTACAACCTTCATTGG+CGG | + | chr8_2:46127440-46127459 | None:intergenic | 45.0% | |
| TGAAGGTTGTACCAACCTTG+AGG | - | chr8_2:46127444-46127463 | Msa1250450:intron | 45.0% | |
| CAGGAGAGCAACAAGAAGAA+CGG | - | chr8_2:46127518-46127537 | Msa1250450:intron | 45.0% | |
| ATGGACAAGGCCTCAGTATT+GGG | - | chr8_2:46128144-46128163 | Msa1250450:CDS | 45.0% | |
| GAAATGGTCTGAACTGTCTG+CGG | - | chr8_2:46128263-46128282 | Msa1250450:intron | 45.0% | |
| CTGCCTTATCTTTCTCACAG+AGG | + | chr8_2:46128413-46128432 | None:intergenic | 45.0% | |
| ! | TTCATTTGGTTCCTCTGCTC+TGG | - | chr8_2:46128497-46128516 | Msa1250450:five_prime_UTR | 45.0% |
| !! | ACTAATTATTATTAATTATT+AGG | - | chr8_2:46121958-46121977 | Msa1250450:intron | 5.0% |
| !! | CTAATTATTATTAATTATTA+GGG | - | chr8_2:46121959-46121978 | Msa1250450:intron | 5.0% |
| !!! | TTTAAAAAAATCAAATTTTT+TGG | + | chr8_2:46123873-46123892 | None:intergenic | 5.0% |
| !!! | AAAAATTTGATTTTTTTAAA+AGG | - | chr8_2:46123873-46123892 | Msa1250450:intron | 5.0% |
| !! | AATATTTAGATATTTATATT+AGG | - | chr8_2:46124273-46124292 | Msa1250450:intron | 5.0% |
| !!! | AATTATGTTTTATTTTATTA+GGG | + | chr8_2:46124473-46124492 | None:intergenic | 5.0% |
| !!! | AAATTATGTTTTATTTTATT+AGG | + | chr8_2:46124474-46124493 | None:intergenic | 5.0% |
| !! | TATATATATATATATATATG+GGG | + | chr8_2:46125058-46125077 | None:intergenic | 5.0% |
| TGGTAGGAGGAGAATTTGGG+AGG | + | chr8_2:46120881-46120900 | None:intergenic | 50.0% | |
| AGTGAGTCCACAAAACTGGG+GGG | + | chr8_2:46120907-46120926 | None:intergenic | 50.0% | |
| GAGTGAGTCCACAAAACTGG+GGG | + | chr8_2:46120908-46120927 | None:intergenic | 50.0% | |
| GGAGTGAGTCCACAAAACTG+GGG | + | chr8_2:46120909-46120928 | None:intergenic | 50.0% | |
| CAGGAGTGAGTCCACAAAAC+TGG | + | chr8_2:46120911-46120930 | None:intergenic | 50.0% | |
| CATGATATGGTCATCGGCGT+TGG | + | chr8_2:46121081-46121100 | None:intergenic | 50.0% | |
| CAACGCCGATGACCATATCA+TGG | - | chr8_2:46121079-46121098 | Msa1250450:intron | 50.0% | |
| ! | GATTCACTGCCAGAAGCACA+AGG | - | chr8_2:46121713-46121732 | Msa1250450:intron | 50.0% |
| ! | TTCACTGCCAGAAGCACAAG+GGG | - | chr8_2:46121715-46121734 | Msa1250450:intron | 50.0% |
| GGGGATTCTGGTGAAAGTCA+TGG | - | chr8_2:46121734-46121753 | Msa1250450:intron | 50.0% | |
| ACTTCAATGCTGCCATGCGT+AGG | + | chr8_2:46122836-46122855 | None:intergenic | 50.0% | |
| CATAAGAACGGCCCTGGTTA+TGG | + | chr8_2:46124416-46124435 | None:intergenic | 50.0% | |
| TATCCATAGACGTGGCTCAC+CGG | + | chr8_2:46124674-46124693 | None:intergenic | 50.0% | |
| ! | ACGGCTATGCCCGATTTTGA+AGG | + | chr8_2:46124811-46124830 | None:intergenic | 50.0% |
| GAAATCACGCCTTGAGGTGT+GGG | + | chr8_2:46125156-46125175 | None:intergenic | 50.0% | |
| TATCCTTAACCATTGCCCCG+GGG | - | chr8_2:46126236-46126255 | Msa1250450:intron | 50.0% | |
| ! | TGTGCTATTCAGCTAGAGCC+AGG | - | chr8_2:46126871-46126890 | Msa1250450:intron | 50.0% |
| ! | GTGCTATTCAGCTAGAGCCA+GGG | - | chr8_2:46126872-46126891 | Msa1250450:intron | 50.0% |
| TGCTATTCAGCTAGAGCCAG+GGG | - | chr8_2:46126873-46126892 | Msa1250450:intron | 50.0% | |
| GATGGACAAGGCCTCAGTAT+TGG | - | chr8_2:46128143-46128162 | Msa1250450:CDS | 50.0% | |
| !! | GGAGCAAGTGAAAGTGTTGG+AGG | - | chr8_2:46128197-46128216 | Msa1250450:CDS | 50.0% |
| GTCTGCGGATGTCGATGTTT+CGG | - | chr8_2:46128278-46128297 | Msa1250450:intron | 50.0% | |
| GGCCATAACCATCATTGCTC+AGG | - | chr8_2:46128518-46128537 | Msa1250450:five_prime_UTR | 50.0% | |
| !! | CAAAACTGGGGGGTGTTGGT+AGG | + | chr8_2:46120897-46120916 | None:intergenic | 55.0% |
| ! | ACCAACACCCCCCAGTTTTG+TGG | - | chr8_2:46120897-46120916 | Msa1250450:intron | 55.0% |
| ! | TCCACAAAACTGGGGGGTGT+TGG | + | chr8_2:46120901-46120920 | None:intergenic | 55.0% |
| CCAGAATCCCCTTGTGCTTC+TGG | + | chr8_2:46121725-46121744 | None:intergenic | 55.0% | |
| ! | CCAGAAGCACAAGGGGATTC+TGG | - | chr8_2:46121722-46121741 | Msa1250450:intron | 55.0% |
| GGAAATCACGCCTTGAGGTG+TGG | + | chr8_2:46125157-46125176 | None:intergenic | 55.0% | |
| ATCCTTAACCATTGCCCCGG+GGG | - | chr8_2:46126237-46126256 | Msa1250450:intron | 55.0% | |
| AAATGCTAACTGGTGCCCCC+GGG | + | chr8_2:46126255-46126274 | None:intergenic | 55.0% | |
| GAAATGCTAACTGGTGCCCC+CGG | + | chr8_2:46126256-46126275 | None:intergenic | 55.0% | |
| TATTCAGCTAGAGCCAGGGG+AGG | - | chr8_2:46126876-46126895 | Msa1250450:intron | 55.0% | |
| CGAGAATCCACCGCCAATGA+AGG | - | chr8_2:46127427-46127446 | Msa1250450:intron | 55.0% | |
| GGTACAACCTTCATTGGCGG+TGG | + | chr8_2:46127437-46127456 | None:intergenic | 55.0% | |
| GATGGTTATGGCCAGAGCAG+AGG | + | chr8_2:46128511-46128530 | None:intergenic | 55.0% | |
| !! | AACTGGGGGGTGTTGGTAGG+AGG | + | chr8_2:46120894-46120913 | None:intergenic | 60.0% |
| !!! | GGCGTTGGCTCGAGACCTTT+TGG | + | chr8_2:46121066-46121085 | None:intergenic | 60.0% |
| !! | TGGCTCACCGGTTCCAGCTT+GGG | + | chr8_2:46124662-46124681 | None:intergenic | 60.0% |
| GAACCGGTGAGCCACGTCTA+TGG | - | chr8_2:46124668-46124687 | Msa1250450:intron | 60.0% | |
| AATGCTAACTGGTGCCCCCG+GGG | + | chr8_2:46126254-46126273 | None:intergenic | 60.0% | |
| !! | GTGGCTCACCGGTTCCAGCT+TGG | + | chr8_2:46124663-46124682 | None:intergenic | 65.0% |
| TGCCCCCGGGGCAATGGTTA+AGG | + | chr8_2:46126242-46126261 | None:intergenic | 65.0% | |
| AACTGGTGCCCCCGGGGCAA+TGG | + | chr8_2:46126248-46126267 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 46120283 | 46128551 | 46120283 | ID=Msa1250450;Name=Msa1250450 |
| chr8_2 | mRNA | 46120283 | 46128551 | 46120283 | ID=Msa1250450-mRNA-1;Parent=Msa1250450;Name=Msa1250450-mRNA-1;_AED=0.18;_eAED=0.18;_QI=123|0.25|0.11|1|0.37|0.22|9|0|532 |
| chr8_2 | exon | 46120283 | 46120645 | 46120283 | ID=Msa1250450-mRNA-1:exon:13893;Parent=Msa1250450-mRNA-1 |
| chr8_2 | exon | 46121173 | 46121313 | 46121173 | ID=Msa1250450-mRNA-1:exon:13892;Parent=Msa1250450-mRNA-1 |
| chr8_2 | exon | 46121326 | 46121554 | 46121326 | ID=Msa1250450-mRNA-1:exon:13891;Parent=Msa1250450-mRNA-1 |
| chr8_2 | exon | 46125981 | 46126045 | 46125981 | ID=Msa1250450-mRNA-1:exon:13890;Parent=Msa1250450-mRNA-1 |
| chr8_2 | exon | 46126992 | 46127182 | 46126992 | ID=Msa1250450-mRNA-1:exon:13889;Parent=Msa1250450-mRNA-1 |
| chr8_2 | exon | 46127192 | 46127378 | 46127192 | ID=Msa1250450-mRNA-1:exon:13888;Parent=Msa1250450-mRNA-1 |
| chr8_2 | exon | 46127836 | 46127973 | 46127836 | ID=Msa1250450-mRNA-1:exon:13887;Parent=Msa1250450-mRNA-1 |
| chr8_2 | exon | 46128052 | 46128270 | 46128052 | ID=Msa1250450-mRNA-1:exon:13886;Parent=Msa1250450-mRNA-1 |
| chr8_2 | exon | 46128363 | 46128551 | 46128363 | ID=Msa1250450-mRNA-1:exon:13885;Parent=Msa1250450-mRNA-1 |
| chr8_2 | five_prime_UTR | 46128429 | 46128551 | 46128429 | ID=Msa1250450-mRNA-1:five_prime_utr;Parent=Msa1250450-mRNA-1 |
| chr8_2 | CDS | 46128363 | 46128428 | 46128363 | ID=Msa1250450-mRNA-1:cds;Parent=Msa1250450-mRNA-1 |
| chr8_2 | CDS | 46128052 | 46128270 | 46128052 | ID=Msa1250450-mRNA-1:cds;Parent=Msa1250450-mRNA-1 |
| chr8_2 | CDS | 46127836 | 46127973 | 46127836 | ID=Msa1250450-mRNA-1:cds;Parent=Msa1250450-mRNA-1 |
| chr8_2 | CDS | 46127192 | 46127378 | 46127192 | ID=Msa1250450-mRNA-1:cds;Parent=Msa1250450-mRNA-1 |
| chr8_2 | CDS | 46126992 | 46127182 | 46126992 | ID=Msa1250450-mRNA-1:cds;Parent=Msa1250450-mRNA-1 |
| chr8_2 | CDS | 46125981 | 46126045 | 46125981 | ID=Msa1250450-mRNA-1:cds;Parent=Msa1250450-mRNA-1 |
| chr8_2 | CDS | 46121326 | 46121554 | 46121326 | ID=Msa1250450-mRNA-1:cds;Parent=Msa1250450-mRNA-1 |
| chr8_2 | CDS | 46121173 | 46121313 | 46121173 | ID=Msa1250450-mRNA-1:cds;Parent=Msa1250450-mRNA-1 |
| chr8_2 | CDS | 46120283 | 46120645 | 46120283 | ID=Msa1250450-mRNA-1:cds;Parent=Msa1250450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
