Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1253030 | KEH20320.1 | 93.042 | 503 | 35 | 0 | 1 | 503 | 1 | 503 | 0.0 | 935 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1253030 | A0A072U3C7 | 93.042 | 503 | 35 | 0 | 1 | 503 | 1 | 503 | 0.0 | 935 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1253030 | Msa1279410 | 0.995029 | 2.331880e-212 | -8.615850e-47 |
| Msa1004380 | Msa1253030 | 0.800265 | 1.563159e-48 | -8.615850e-47 |
| Msa1036610 | Msa1253030 | 0.811591 | 6.484763e-51 | -8.615850e-47 |
| Msa1070010 | Msa1253030 | 0.802524 | 5.384548e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1253030 | MtrunA17_Chr8g0369471 | 93.089 | 492 | 34 | 0 | 1 | 492 | 1 | 492 | 0.0 | 915 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1253030 | AT5G48340.1 | 46.185 | 498 | 251 | 5 | 1 | 492 | 1 | 487 | 4.70e-132 | 393 |
| Msa1253030 | AT5G48340.4 | 46.185 | 498 | 251 | 5 | 1 | 492 | 1 | 487 | 4.70e-132 | 393 |
| Msa1253030 | AT5G48340.2 | 46.076 | 497 | 251 | 5 | 1 | 491 | 1 | 486 | 1.91e-131 | 391 |
| Msa1253030 | AT5G48340.3 | 42.331 | 163 | 88 | 3 | 1 | 159 | 1 | 161 | 3.98e-35 | 135 |
| Msa1253030 | AT5G48340.3 | 37.295 | 244 | 127 | 4 | 256 | 492 | 146 | 370 | 5.43e-25 | 107 |
Find 100 sgRNAs with CRISPR-Local
Find 334 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGTCTTGGGTTCTGTATTAT+AGG | 0.193546 | 8_2:+50203604 | Msa1253030:CDS |
| TAGACAATGTGCCTGAATTT+TGG | 0.227769 | 8_2:+50203049 | Msa1253030:CDS |
| GCCTCATTACTTTCTCGATT+TGG | 0.243369 | 8_2:+50202999 | Msa1253030:CDS |
| GCGAGATCGTGCTTCTTCTT+TGG | 0.251308 | 8_2:-50202070 | None:intergenic |
| TCTTCTTCCTCCACCGCATT+AGG | 0.262634 | 8_2:+50201724 | Msa1253030:five_prime_UTR |
| GTCAAGCTATTACCATCATT+TGG | 0.281391 | 8_2:-50203519 | None:intergenic |
| CTCAGGGGCGGCAGCTTCTA+AGG | 0.291608 | 8_2:+50203424 | Msa1253030:CDS |
| CTTCTTCCTCCACCGCATTA+GGG | 0.337667 | 8_2:+50201725 | Msa1253030:five_prime_UTR |
| GGCTTTGTAGCAACCATTGC+AGG | 0.339622 | 8_2:-50202979 | None:intergenic |
| TGATAGGCACGGCGTCGTTT+TGG | 0.339810 | 8_2:-50201701 | None:intergenic |
| TTCATTTCATGGATTGGAAC+AGG | 0.342073 | 8_2:+50202864 | Msa1253030:CDS |
| CGGTTTCCAGTTCCTTCAAT+AGG | 0.353102 | 8_2:-50201919 | None:intergenic |
| TGCTCACACATAGAAGAAAA+AGG | 0.358266 | 8_2:-50203219 | None:intergenic |
| ATAGTGTAAGTTCTTTATCT+TGG | 0.363896 | 8_2:+50203955 | Msa1253030:CDS |
| ATTGTCTAGAAAATTCTTGA+TGG | 0.371708 | 8_2:-50203034 | None:intergenic |
| TTGGCAGATAATCCAACTTC+TGG | 0.379076 | 8_2:-50203884 | None:intergenic |
| TCAATAGATGACCAAAATTC+AGG | 0.380403 | 8_2:-50203060 | None:intergenic |
| TCAAGCTATTACCATCATTT+GGG | 0.387259 | 8_2:-50203518 | None:intergenic |
| GAGTGGGTTCTGATATGAAT+AGG | 0.388282 | 8_2:-50201847 | None:intergenic |
| GAGAATTGAATTGCGAGGTT+TGG | 0.389494 | 8_2:+50203311 | Msa1253030:CDS |
| TTGTCAGACGAAGATTGTTC+TGG | 0.389788 | 8_2:+50203735 | Msa1253030:CDS |
| GTGTCTTGGACTTCAGTCTT+GGG | 0.391880 | 8_2:+50203590 | Msa1253030:CDS |
| GCAGGATTTGTGTTACTTTG+TGG | 0.396647 | 8_2:+50203263 | Msa1253030:CDS |
| AGTGTCTTGGACTTCAGTCT+TGG | 0.399267 | 8_2:+50203589 | Msa1253030:CDS |
| AATCCACCTATTGAAGGAAC+TGG | 0.410212 | 8_2:+50201913 | Msa1253030:CDS |
| AAACCTCGCAATTCAATTCT+CGG | 0.412769 | 8_2:-50203309 | None:intergenic |
| GAGAGGATTCGAATGATGTA+TGG | 0.417526 | 8_2:+50203166 | Msa1253030:CDS |
| GACTTTCGCCAGCGACTCCT+TGG | 0.418063 | 8_2:-50203466 | None:intergenic |
| CATTCGAGCTTCTGCGCGAC+CGG | 0.420677 | 8_2:-50201966 | None:intergenic |
| GGATATTTGTTGGGAAGAGT+TGG | 0.420677 | 8_2:+50202930 | Msa1253030:CDS |
| AACCACTGCAACACACGCTT+AGG | 0.427913 | 8_2:-50202841 | None:intergenic |
| GTTGGAGTTACAGTGAATAG+AGG | 0.439889 | 8_2:-50201802 | None:intergenic |
| GTTGAATGCCGTCATAGCTC+AGG | 0.447333 | 8_2:+50203407 | Msa1253030:CDS |
| TGGTCCGCGATAATCTCTTC+CGG | 0.454400 | 8_2:+50201947 | Msa1253030:CDS |
| CTGGAAGTGGTGAAGTGTCT+TGG | 0.456625 | 8_2:+50203576 | Msa1253030:CDS |
| GGGTTTCTGGATCTATTGAC+TGG | 0.457184 | 8_2:+50203376 | Msa1253030:CDS |
| ATCTGCCAAATGCTAAAAGT+TGG | 0.464189 | 8_2:+50203898 | Msa1253030:CDS |
| ATGGATTGGAACAGGGGAAA+GGG | 0.469863 | 8_2:+50202872 | Msa1253030:CDS |
| CATGGATTGGAACAGGGGAA+AGG | 0.470041 | 8_2:+50202871 | Msa1253030:CDS |
| AGTGCAAGACTCCTGAGTCC+TGG | 0.472435 | 8_2:+50203637 | Msa1253030:CDS |
| CAGATTGGTTTCCGCAACTC+TGG | 0.476001 | 8_2:+50203681 | Msa1253030:CDS |
| AGGAACTGGAAACCGTTCTC+TGG | 0.477123 | 8_2:+50201927 | Msa1253030:CDS |
| CGGTGGAGGAAGAAGATGAT+AGG | 0.477766 | 8_2:-50201717 | None:intergenic |
| TTGGAGTTACAGTGAATAGA+GGG | 0.486350 | 8_2:-50201801 | None:intergenic |
| CGAAGAGGCCAAGGAGTCGC+TGG | 0.491398 | 8_2:+50203458 | Msa1253030:CDS |
| TAGGTTTAAGATGGAAACTC+TGG | 0.494699 | 8_2:+50203557 | Msa1253030:CDS |
| ACTTCGAATCCACCTATTGA+AGG | 0.495841 | 8_2:+50201907 | Msa1253030:CDS |
| GATAACTCACCGCAAAAGCT+TGG | 0.497614 | 8_2:+50202118 | Msa1253030:CDS |
| AACCTCGCAATTCAATTCTC+GGG | 0.500216 | 8_2:-50203308 | None:intergenic |
| GTGCAAGACTCCTGAGTCCT+GGG | 0.505880 | 8_2:+50203638 | Msa1253030:CDS |
| TTTGTTGGGAAGAGTTGGAG+TGG | 0.510782 | 8_2:+50202935 | Msa1253030:CDS |
| CATTTCATGGATTGGAACAG+GGG | 0.519467 | 8_2:+50202866 | Msa1253030:CDS |
| TAAGGATTTGATGTATAGAG+AGG | 0.525046 | 8_2:+50203149 | Msa1253030:CDS |
| AAGCTAGAAAGAAGAGGAGG+AGG | 0.528292 | 8_2:+50203805 | Msa1253030:CDS |
| GAAATGAAGGGAAGTTCGAT+GGG | 0.533912 | 8_2:-50201755 | None:intergenic |
| CTGCCGCCCCTGAGCTATGA+CGG | 0.534254 | 8_2:-50203415 | None:intergenic |
| TGGGAAGAGTTGGAGTGGAA+AGG | 0.539787 | 8_2:+50202940 | Msa1253030:CDS |
| TTTGCGTCGTTGTTTCGAGT+GGG | 0.543489 | 8_2:-50201863 | None:intergenic |
| TTTGCGTGACGAAGAGGCCA+AGG | 0.545883 | 8_2:+50203449 | Msa1253030:CDS |
| AGAAATGAAGGGAAGTTCGA+TGG | 0.547566 | 8_2:-50201756 | None:intergenic |
| CGAAACAACGACGCAAACGC+AGG | 0.547696 | 8_2:+50201869 | Msa1253030:CDS |
| TGATTTGTCTCGGTTGTTTG+TGG | 0.547770 | 8_2:+50203335 | Msa1253030:CDS |
| ATATCTGCAATCCCAAATGA+TGG | 0.547872 | 8_2:+50203507 | Msa1253030:CDS |
| TTTCCAGTTCCTTCAATAGG+TGG | 0.551534 | 8_2:-50201916 | None:intergenic |
| TGAAAACCCTAATGCGGTGG+AGG | 0.557770 | 8_2:-50201731 | None:intergenic |
| GATTATCGCGGACCAGAGAA+CGG | 0.558188 | 8_2:-50201939 | None:intergenic |
| TAAGATGGAAACTCTGGAAG+TGG | 0.559227 | 8_2:+50203563 | Msa1253030:CDS |
| AGAGGATTCGAATGATGTAT+GGG | 0.561752 | 8_2:+50203167 | Msa1253030:CDS |
| CATGCATTGTTAGATGAGGA+TGG | 0.563566 | 8_2:+50203708 | Msa1253030:CDS |
| ACCACTGCAACACACGCTTA+GGG | 0.565401 | 8_2:-50202840 | None:intergenic |
| GAGGTTTGGATGATTTGTCT+CGG | 0.567927 | 8_2:+50203325 | Msa1253030:CDS |
| GTTTGCGTCGTTGTTTCGAG+TGG | 0.569663 | 8_2:-50201864 | None:intergenic |
| TCATTTCATGGATTGGAACA+GGG | 0.571078 | 8_2:+50202865 | Msa1253030:CDS |
| ACATGGACAATCACCTGCAA+TGG | 0.571987 | 8_2:+50202966 | Msa1253030:CDS |
| TTGAATGCCGTCATAGCTCA+GGG | 0.576535 | 8_2:+50203408 | Msa1253030:CDS |
| AAGACGGACTCCCAGGACTC+AGG | 0.581627 | 8_2:-50203648 | None:intergenic |
| TGGCTCCGCAAAACCATCGC+GGG | 0.588456 | 8_2:+50201989 | Msa1253030:CDS |
| ACCCTAAGCGTGTGTTGCAG+TGG | 0.589208 | 8_2:+50202839 | Msa1253030:CDS |
| GTCGCGCAGAAGCTCGAATG+TGG | 0.594484 | 8_2:+50201969 | Msa1253030:CDS |
| ATGCATGTTTACCAGAGTTG+CGG | 0.599555 | 8_2:-50203692 | None:intergenic |
| AAAATTTCACGCTGGTCACG+AGG | 0.608242 | 8_2:-50202028 | None:intergenic |
| GGGTGAAAACCCTAATGCGG+TGG | 0.624070 | 8_2:-50201734 | None:intergenic |
| TCCAAATCGAGAAAGTAATG+AGG | 0.627045 | 8_2:-50203000 | None:intergenic |
| AATTGATGAAAATTTCACGC+TGG | 0.627657 | 8_2:-50202036 | None:intergenic |
| GATGCAGTTGAATCCCGCGA+TGG | 0.630007 | 8_2:-50202002 | None:intergenic |
| TTGGAGTGGAAAGGAAAACA+TGG | 0.632226 | 8_2:+50202949 | Msa1253030:CDS |
| AGCTAGAAAGAAGAGGAGGA+GGG | 0.640434 | 8_2:+50203806 | Msa1253030:CDS |
| CGTGTGATTTGAAGAAGCAG+CGG | 0.644875 | 8_2:-50201663 | None:intergenic |
| ATGCCGTCATAGCTCAGGGG+CGG | 0.646491 | 8_2:+50203412 | Msa1253030:CDS |
| CTGACGAGTACTCTTCTGCA+TGG | 0.658570 | 8_2:+50203931 | Msa1253030:CDS |
| GAGGAAGAAGATGATAGGCA+CGG | 0.663788 | 8_2:-50201712 | None:intergenic |
| GACCCGAGAATTGAATTGCG+AGG | 0.666025 | 8_2:+50203306 | Msa1253030:CDS |
| GTTTCTGAGTCTGTGAAAGA+CGG | 0.671580 | 8_2:+50203084 | Msa1253030:CDS |
| TAAACATGCATTGTTAGATG+AGG | 0.688381 | 8_2:+50203704 | Msa1253030:CDS |
| ATGGGGTGAAAACCCTAATG+CGG | 0.700737 | 8_2:-50201737 | None:intergenic |
| AGGAGGGCATATGATTACGA+TGG | 0.705287 | 8_2:+50203822 | Msa1253030:CDS |
| GTGGCTCCGCAAAACCATCG+CGG | 0.711146 | 8_2:+50201988 | Msa1253030:CDS |
| AAATGAAGGGAAGTTCGATG+GGG | 0.712842 | 8_2:-50201754 | None:intergenic |
| GCGACCGGAAGAGATTATCG+CGG | 0.750402 | 8_2:-50201951 | None:intergenic |
| TGAATGCCGTCATAGCTCAG+GGG | 0.777777 | 8_2:+50203409 | Msa1253030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAACCTATTATTAAAAAAT+GGG | - | chr8_2:50203545-50203564 | None:intergenic | 10.0% |
| !! | TTAAACCTATTATTAAAAAA+TGG | - | chr8_2:50203546-50203565 | None:intergenic | 10.0% |
| !! | TAAACCTATTATTAAAAAAT+GGG | - | chr8_2:50203545-50203564 | None:intergenic | 10.0% |
| !! | TTAAACCTATTATTAAAAAA+TGG | - | chr8_2:50203546-50203565 | None:intergenic | 10.0% |
| !!! | AAACTGATTTTTAAGTTAAT+TGG | + | chr8_2:50202240-50202259 | Msa1253030:intron | 15.0% |
| !! | AAACCTATTATTAAAAAATG+GGG | - | chr8_2:50203544-50203563 | None:intergenic | 15.0% |
| !!! | TTTTAATAATAGGTTTAAGA+TGG | + | chr8_2:50203548-50203567 | Msa1253030:CDS | 15.0% |
| !!! | AAACTGATTTTTAAGTTAAT+TGG | + | chr8_2:50202240-50202259 | Msa1253030:intron | 15.0% |
| !! | AAACCTATTATTAAAAAATG+GGG | - | chr8_2:50203544-50203563 | None:intergenic | 15.0% |
| !!! | TTTTAATAATAGGTTTAAGA+TGG | + | chr8_2:50203548-50203567 | Msa1253030:CDS | 15.0% |
| !!! | GTTTTGATAAATTTGAATAG+CGG | - | chr8_2:50201644-50201663 | None:intergenic | 20.0% |
| !!! | ATTTTTAAGTTAATTGGTTC+CGG | + | chr8_2:50202246-50202265 | Msa1253030:intron | 20.0% |
| !!! | TAAAAAAAGTGATTTGTGTT+TGG | + | chr8_2:50202287-50202306 | Msa1253030:intron | 20.0% |
| !! | TCAAGTAAAATTAATTCTAG+AGG | + | chr8_2:50202342-50202361 | Msa1253030:intron | 20.0% |
| !! | TCAGTTTGCATTTAAAAATA+GGG | + | chr8_2:50202909-50202928 | Msa1253030:CDS | 20.0% |
| !! | TTAAAAATAGGGATATTTGT+TGG | + | chr8_2:50202920-50202939 | Msa1253030:CDS | 20.0% |
| !! | TAAAAATAGGGATATTTGTT+GGG | + | chr8_2:50202921-50202940 | Msa1253030:CDS | 20.0% |
| !!! | GTTTTGATAAATTTGAATAG+CGG | - | chr8_2:50201644-50201663 | None:intergenic | 20.0% |
| !!! | ATTTTTAAGTTAATTGGTTC+CGG | + | chr8_2:50202246-50202265 | Msa1253030:intron | 20.0% |
| !!! | TAAAAAAAGTGATTTGTGTT+TGG | + | chr8_2:50202287-50202306 | Msa1253030:intron | 20.0% |
| !! | TCAAGTAAAATTAATTCTAG+AGG | + | chr8_2:50202342-50202361 | Msa1253030:intron | 20.0% |
| !! | TCAGTTTGCATTTAAAAATA+GGG | + | chr8_2:50202909-50202928 | Msa1253030:CDS | 20.0% |
| !! | TTAAAAATAGGGATATTTGT+TGG | + | chr8_2:50202920-50202939 | Msa1253030:CDS | 20.0% |
| !! | TAAAAATAGGGATATTTGTT+GGG | + | chr8_2:50202921-50202940 | Msa1253030:CDS | 20.0% |
| !!! | GGAATTTTGAAAGAAATGAA+GGG | - | chr8_2:50201770-50201789 | None:intergenic | 25.0% |
| ! | GCAAATAAGTTATCAAAACA+GGG | - | chr8_2:50202469-50202488 | None:intergenic | 25.0% |
| ! | TGCAAATAAGTTATCAAAAC+AGG | - | chr8_2:50202470-50202489 | None:intergenic | 25.0% |
| ! | TTTCATCTTATTCTCATATG+TGG | - | chr8_2:50202655-50202674 | None:intergenic | 25.0% |
| ! | ATTCACAAACAAAACAATAC+GGG | - | chr8_2:50202780-50202799 | None:intergenic | 25.0% |
| ! | GATTCACAAACAAAACAATA+CGG | - | chr8_2:50202781-50202800 | None:intergenic | 25.0% |
| ! | TTGTGAATCTTGATTGTTTA+TGG | + | chr8_2:50202792-50202811 | Msa1253030:intron | 25.0% |
| ! | CTTGATTGTTTATGGTAAAT+TGG | + | chr8_2:50202800-50202819 | Msa1253030:intron | 25.0% |
| ! | CTCAGTTTGCATTTAAAAAT+AGG | + | chr8_2:50202908-50202927 | Msa1253030:CDS | 25.0% |
| ! | ATTGTCTAGAAAATTCTTGA+TGG | - | chr8_2:50203037-50203056 | None:intergenic | 25.0% |
| !!! | GTTTTTCGTTCGTTATTTTA+AGG | + | chr8_2:50203131-50203150 | Msa1253030:CDS | 25.0% |
| !!! | TGACCCCATTTTTTAATAAT+AGG | + | chr8_2:50203538-50203557 | Msa1253030:CDS | 25.0% |
| ! | AATCTGATTATGCAAAAAGA+CGG | - | chr8_2:50203667-50203686 | None:intergenic | 25.0% |
| !! | TTTTTCTTAACTCTAACAGA+AGG | - | chr8_2:50203774-50203793 | None:intergenic | 25.0% |
| ! | ATAGTGTAAGTTCTTTATCT+TGG | + | chr8_2:50203955-50203974 | Msa1253030:CDS | 25.0% |
| !!! | GGAATTTTGAAAGAAATGAA+GGG | - | chr8_2:50201770-50201789 | None:intergenic | 25.0% |
| ! | GCAAATAAGTTATCAAAACA+GGG | - | chr8_2:50202469-50202488 | None:intergenic | 25.0% |
| ! | TGCAAATAAGTTATCAAAAC+AGG | - | chr8_2:50202470-50202489 | None:intergenic | 25.0% |
| ! | TTTCATCTTATTCTCATATG+TGG | - | chr8_2:50202655-50202674 | None:intergenic | 25.0% |
| ! | ATTCACAAACAAAACAATAC+GGG | - | chr8_2:50202780-50202799 | None:intergenic | 25.0% |
| ! | GATTCACAAACAAAACAATA+CGG | - | chr8_2:50202781-50202800 | None:intergenic | 25.0% |
| ! | TTGTGAATCTTGATTGTTTA+TGG | + | chr8_2:50202792-50202811 | Msa1253030:intron | 25.0% |
| ! | CTTGATTGTTTATGGTAAAT+TGG | + | chr8_2:50202800-50202819 | Msa1253030:intron | 25.0% |
| ! | CTCAGTTTGCATTTAAAAAT+AGG | + | chr8_2:50202908-50202927 | Msa1253030:CDS | 25.0% |
| ! | ATTGTCTAGAAAATTCTTGA+TGG | - | chr8_2:50203037-50203056 | None:intergenic | 25.0% |
| !!! | GTTTTTCGTTCGTTATTTTA+AGG | + | chr8_2:50203131-50203150 | Msa1253030:CDS | 25.0% |
| !!! | TGACCCCATTTTTTAATAAT+AGG | + | chr8_2:50203538-50203557 | Msa1253030:CDS | 25.0% |
| ! | AATCTGATTATGCAAAAAGA+CGG | - | chr8_2:50203667-50203686 | None:intergenic | 25.0% |
| !! | TTTTTCTTAACTCTAACAGA+AGG | - | chr8_2:50203774-50203793 | None:intergenic | 25.0% |
| ! | ATAGTGTAAGTTCTTTATCT+TGG | + | chr8_2:50203955-50203974 | Msa1253030:CDS | 25.0% |
| !! | GGGAATTTTGAAAGAAATGA+AGG | - | chr8_2:50201771-50201790 | None:intergenic | 30.0% |
| !!! | ATAGGTTGATCATTTTTCGA+AGG | - | chr8_2:50201832-50201851 | None:intergenic | 30.0% |
| AATTGATGAAAATTTCACGC+TGG | - | chr8_2:50202039-50202058 | None:intergenic | 30.0% | |
| !! | ACCTTCAACTCAATTTTAAC+CGG | - | chr8_2:50202268-50202287 | None:intergenic | 30.0% |
| ATATGTTTGAATCCTAGAGT+AGG | - | chr8_2:50202378-50202397 | None:intergenic | 30.0% | |
| GAACTTATGAAAACAGCTTA+TGG | - | chr8_2:50202695-50202714 | None:intergenic | 30.0% | |
| TCAAATAAGCCAATTCAAAC+AGG | + | chr8_2:50202754-50202773 | Msa1253030:intron | 30.0% | |
| ! | GTAAATTGGTAATTATGTGC+AGG | + | chr8_2:50202814-50202833 | Msa1253030:intron | 30.0% |
| TCAATAGATGACCAAAATTC+AGG | - | chr8_2:50203063-50203082 | None:intergenic | 30.0% | |
| !! | TGAATTTTGGTCATCTATTG+AGG | + | chr8_2:50203062-50203081 | Msa1253030:CDS | 30.0% |
| TAAGGATTTGATGTATAGAG+AGG | + | chr8_2:50203149-50203168 | Msa1253030:CDS | 30.0% | |
| !!! | TCTTATTAGTTTTGAAGAGC+AGG | + | chr8_2:50203245-50203264 | Msa1253030:CDS | 30.0% |
| TCAAGCTATTACCATCATTT+GGG | - | chr8_2:50203521-50203540 | None:intergenic | 30.0% | |
| ! | GTCTTTTTGCATAATCAGAT+TGG | + | chr8_2:50203666-50203685 | Msa1253030:CDS | 30.0% |
| TAAACATGCATTGTTAGATG+AGG | + | chr8_2:50203704-50203723 | Msa1253030:CDS | 30.0% | |
| AACAAAAAGCTAGAAAGAAG+AGG | + | chr8_2:50203799-50203818 | Msa1253030:CDS | 30.0% | |
| !! | GGGAATTTTGAAAGAAATGA+AGG | - | chr8_2:50201771-50201790 | None:intergenic | 30.0% |
| !!! | ATAGGTTGATCATTTTTCGA+AGG | - | chr8_2:50201832-50201851 | None:intergenic | 30.0% |
| AATTGATGAAAATTTCACGC+TGG | - | chr8_2:50202039-50202058 | None:intergenic | 30.0% | |
| !! | ACCTTCAACTCAATTTTAAC+CGG | - | chr8_2:50202268-50202287 | None:intergenic | 30.0% |
| ATATGTTTGAATCCTAGAGT+AGG | - | chr8_2:50202378-50202397 | None:intergenic | 30.0% | |
| GAACTTATGAAAACAGCTTA+TGG | - | chr8_2:50202695-50202714 | None:intergenic | 30.0% | |
| TCAAATAAGCCAATTCAAAC+AGG | + | chr8_2:50202754-50202773 | Msa1253030:intron | 30.0% | |
| ! | GTAAATTGGTAATTATGTGC+AGG | + | chr8_2:50202814-50202833 | Msa1253030:intron | 30.0% |
| TCAATAGATGACCAAAATTC+AGG | - | chr8_2:50203063-50203082 | None:intergenic | 30.0% | |
| !! | TGAATTTTGGTCATCTATTG+AGG | + | chr8_2:50203062-50203081 | Msa1253030:CDS | 30.0% |
| TAAGGATTTGATGTATAGAG+AGG | + | chr8_2:50203149-50203168 | Msa1253030:CDS | 30.0% | |
| !!! | TCTTATTAGTTTTGAAGAGC+AGG | + | chr8_2:50203245-50203264 | Msa1253030:CDS | 30.0% |
| TCAAGCTATTACCATCATTT+GGG | - | chr8_2:50203521-50203540 | None:intergenic | 30.0% | |
| ! | GTCTTTTTGCATAATCAGAT+TGG | + | chr8_2:50203666-50203685 | Msa1253030:CDS | 30.0% |
| TAAACATGCATTGTTAGATG+AGG | + | chr8_2:50203704-50203723 | Msa1253030:CDS | 30.0% | |
| AACAAAAAGCTAGAAAGAAG+AGG | + | chr8_2:50203799-50203818 | Msa1253030:CDS | 30.0% | |
| !!! | GAATAGAGGGTTTTGAGTTT+GGG | - | chr8_2:50201791-50201810 | None:intergenic | 35.0% |
| !!! | TGAATAGAGGGTTTTGAGTT+TGG | - | chr8_2:50201792-50201811 | None:intergenic | 35.0% |
| TTGGAGTTACAGTGAATAGA+GGG | - | chr8_2:50201804-50201823 | None:intergenic | 35.0% | |
| ! | AAAACTGAACCAAGCTTTTG+CGG | - | chr8_2:50202130-50202149 | None:intergenic | 35.0% |
| !!! | GTGCTTGAGATTTTTTTTGC+AGG | + | chr8_2:50202166-50202185 | Msa1253030:CDS | 35.0% |
| !!! | GCGTTGTTTTAGTGTATGTT+TGG | + | chr8_2:50202204-50202223 | Msa1253030:intron | 35.0% |
| !! | TCCGGTTAAAATTGAGTTGA+AGG | + | chr8_2:50202264-50202283 | Msa1253030:intron | 35.0% |
| ! | AATTTTGTCTCCTCCAAATG+TGG | + | chr8_2:50202425-50202444 | Msa1253030:intron | 35.0% |
| GGCTTATTTGAACTCATCTA+CGG | - | chr8_2:50202745-50202764 | None:intergenic | 35.0% | |
| ! | TTGCAGTGGTTTTCATTTCA+TGG | + | chr8_2:50202853-50202872 | Msa1253030:CDS | 35.0% |
| ! | GTGGTTTTCATTTCATGGAT+TGG | + | chr8_2:50202858-50202877 | Msa1253030:CDS | 35.0% |
| !! | TTCATTTCATGGATTGGAAC+AGG | + | chr8_2:50202864-50202883 | Msa1253030:CDS | 35.0% |
| !! | TCATTTCATGGATTGGAACA+GGG | + | chr8_2:50202865-50202884 | Msa1253030:CDS | 35.0% |
| TCCAAATCGAGAAAGTAATG+AGG | - | chr8_2:50203003-50203022 | None:intergenic | 35.0% | |
| ! | TAGACAATGTGCCTGAATTT+TGG | + | chr8_2:50203049-50203068 | Msa1253030:CDS | 35.0% |
| AGAGGATTCGAATGATGTAT+GGG | + | chr8_2:50203167-50203186 | Msa1253030:CDS | 35.0% | |
| TGCTCACACATAGAAGAAAA+AGG | - | chr8_2:50203222-50203241 | None:intergenic | 35.0% | |
| AAACCTCGCAATTCAATTCT+CGG | - | chr8_2:50203312-50203331 | None:intergenic | 35.0% | |
| !!! | TGGTTGTTCTTTTGAAGTGT+GGG | + | chr8_2:50203355-50203374 | Msa1253030:CDS | 35.0% |
| ATATCTGCAATCCCAAATGA+TGG | + | chr8_2:50203507-50203526 | Msa1253030:CDS | 35.0% | |
| GTCAAGCTATTACCATCATT+TGG | - | chr8_2:50203522-50203541 | None:intergenic | 35.0% | |
| ! | TAGGTTTAAGATGGAAACTC+TGG | + | chr8_2:50203557-50203576 | Msa1253030:CDS | 35.0% |
| AGTCTTGGGTTCTGTATTAT+AGG | + | chr8_2:50203604-50203623 | Msa1253030:CDS | 35.0% | |
| AAAAAGCTAGAAAGAAGAGG+AGG | + | chr8_2:50203802-50203821 | Msa1253030:CDS | 35.0% | |
| ATCTGCCAAATGCTAAAAGT+TGG | + | chr8_2:50203898-50203917 | Msa1253030:CDS | 35.0% | |
| ! | AGCAACCAACTTTTAGCATT+TGG | - | chr8_2:50203906-50203925 | None:intergenic | 35.0% |
| !!! | GAATAGAGGGTTTTGAGTTT+GGG | - | chr8_2:50201791-50201810 | None:intergenic | 35.0% |
| !!! | TGAATAGAGGGTTTTGAGTT+TGG | - | chr8_2:50201792-50201811 | None:intergenic | 35.0% |
| TTGGAGTTACAGTGAATAGA+GGG | - | chr8_2:50201804-50201823 | None:intergenic | 35.0% | |
| ! | AAAACTGAACCAAGCTTTTG+CGG | - | chr8_2:50202130-50202149 | None:intergenic | 35.0% |
| !!! | GTGCTTGAGATTTTTTTTGC+AGG | + | chr8_2:50202166-50202185 | Msa1253030:CDS | 35.0% |
| !!! | GCGTTGTTTTAGTGTATGTT+TGG | + | chr8_2:50202204-50202223 | Msa1253030:intron | 35.0% |
| !! | TCCGGTTAAAATTGAGTTGA+AGG | + | chr8_2:50202264-50202283 | Msa1253030:intron | 35.0% |
| ! | AATTTTGTCTCCTCCAAATG+TGG | + | chr8_2:50202425-50202444 | Msa1253030:intron | 35.0% |
| GGCTTATTTGAACTCATCTA+CGG | - | chr8_2:50202745-50202764 | None:intergenic | 35.0% | |
| ! | TTGCAGTGGTTTTCATTTCA+TGG | + | chr8_2:50202853-50202872 | Msa1253030:CDS | 35.0% |
| ! | GTGGTTTTCATTTCATGGAT+TGG | + | chr8_2:50202858-50202877 | Msa1253030:CDS | 35.0% |
| !! | TTCATTTCATGGATTGGAAC+AGG | + | chr8_2:50202864-50202883 | Msa1253030:CDS | 35.0% |
| !! | TCATTTCATGGATTGGAACA+GGG | + | chr8_2:50202865-50202884 | Msa1253030:CDS | 35.0% |
| TCCAAATCGAGAAAGTAATG+AGG | - | chr8_2:50203003-50203022 | None:intergenic | 35.0% | |
| ! | TAGACAATGTGCCTGAATTT+TGG | + | chr8_2:50203049-50203068 | Msa1253030:CDS | 35.0% |
| AGAGGATTCGAATGATGTAT+GGG | + | chr8_2:50203167-50203186 | Msa1253030:CDS | 35.0% | |
| TGCTCACACATAGAAGAAAA+AGG | - | chr8_2:50203222-50203241 | None:intergenic | 35.0% | |
| AAACCTCGCAATTCAATTCT+CGG | - | chr8_2:50203312-50203331 | None:intergenic | 35.0% | |
| !!! | TGGTTGTTCTTTTGAAGTGT+GGG | + | chr8_2:50203355-50203374 | Msa1253030:CDS | 35.0% |
| ATATCTGCAATCCCAAATGA+TGG | + | chr8_2:50203507-50203526 | Msa1253030:CDS | 35.0% | |
| GTCAAGCTATTACCATCATT+TGG | - | chr8_2:50203522-50203541 | None:intergenic | 35.0% | |
| ! | TAGGTTTAAGATGGAAACTC+TGG | + | chr8_2:50203557-50203576 | Msa1253030:CDS | 35.0% |
| AGTCTTGGGTTCTGTATTAT+AGG | + | chr8_2:50203604-50203623 | Msa1253030:CDS | 35.0% | |
| AAAAAGCTAGAAAGAAGAGG+AGG | + | chr8_2:50203802-50203821 | Msa1253030:CDS | 35.0% | |
| ATCTGCCAAATGCTAAAAGT+TGG | + | chr8_2:50203898-50203917 | Msa1253030:CDS | 35.0% | |
| ! | AGCAACCAACTTTTAGCATT+TGG | - | chr8_2:50203906-50203925 | None:intergenic | 35.0% |
| AAATGAAGGGAAGTTCGATG+GGG | - | chr8_2:50201757-50201776 | None:intergenic | 40.0% | |
| GAAATGAAGGGAAGTTCGAT+GGG | - | chr8_2:50201758-50201777 | None:intergenic | 40.0% | |
| AGAAATGAAGGGAAGTTCGA+TGG | - | chr8_2:50201759-50201778 | None:intergenic | 40.0% | |
| GTTGGAGTTACAGTGAATAG+AGG | - | chr8_2:50201805-50201824 | None:intergenic | 40.0% | |
| !! | TCATTTTTCGAAGGTGGAGT+TGG | - | chr8_2:50201823-50201842 | None:intergenic | 40.0% |
| !! | GGTTGATCATTTTTCGAAGG+TGG | - | chr8_2:50201829-50201848 | None:intergenic | 40.0% |
| ! | GAGTGGGTTCTGATATGAAT+AGG | - | chr8_2:50201850-50201869 | None:intergenic | 40.0% |
| ACTTCGAATCCACCTATTGA+AGG | + | chr8_2:50201907-50201926 | Msa1253030:CDS | 40.0% | |
| AATCCACCTATTGAAGGAAC+TGG | + | chr8_2:50201913-50201932 | Msa1253030:CDS | 40.0% | |
| TTTCCAGTTCCTTCAATAGG+TGG | - | chr8_2:50201919-50201938 | None:intergenic | 40.0% | |
| GGCAAAACTAATCCTACTCT+AGG | + | chr8_2:50202363-50202382 | Msa1253030:intron | 40.0% | |
| ! | TGTGTGTTTGGTTCCACATT+TGG | - | chr8_2:50202441-50202460 | None:intergenic | 40.0% |
| !! | GCTGTTTTCGTAAGCTATCT+AGG | + | chr8_2:50202628-50202647 | Msa1253030:intron | 40.0% |
| !! | CATTTCATGGATTGGAACAG+GGG | + | chr8_2:50202866-50202885 | Msa1253030:CDS | 40.0% |
| ! | GGATATTTGTTGGGAAGAGT+TGG | + | chr8_2:50202930-50202949 | Msa1253030:CDS | 40.0% |
| TTGGAGTGGAAAGGAAAACA+TGG | + | chr8_2:50202949-50202968 | Msa1253030:CDS | 40.0% | |
| GCCTCATTACTTTCTCGATT+TGG | + | chr8_2:50202999-50203018 | Msa1253030:CDS | 40.0% | |
| GTTTCTGAGTCTGTGAAAGA+CGG | + | chr8_2:50203084-50203103 | Msa1253030:CDS | 40.0% | |
| GAGAGGATTCGAATGATGTA+TGG | + | chr8_2:50203166-50203185 | Msa1253030:CDS | 40.0% | |
| !! | GCAGGATTTGTGTTACTTTG+TGG | + | chr8_2:50203263-50203282 | Msa1253030:CDS | 40.0% |
| AACCTCGCAATTCAATTCTC+GGG | - | chr8_2:50203311-50203330 | None:intergenic | 40.0% | |
| GAGAATTGAATTGCGAGGTT+TGG | + | chr8_2:50203311-50203330 | Msa1253030:CDS | 40.0% | |
| ! | GAGGTTTGGATGATTTGTCT+CGG | + | chr8_2:50203325-50203344 | Msa1253030:CDS | 40.0% |
| ! | TGATTTGTCTCGGTTGTTTG+TGG | + | chr8_2:50203335-50203354 | Msa1253030:CDS | 40.0% |
| !!! | GTGGTTGTTCTTTTGAAGTG+TGG | + | chr8_2:50203354-50203373 | Msa1253030:CDS | 40.0% |
| !!! | GGTTGTTCTTTTGAAGTGTG+GGG | + | chr8_2:50203356-50203375 | Msa1253030:CDS | 40.0% |
| ! | TAAGATGGAAACTCTGGAAG+TGG | + | chr8_2:50203563-50203582 | Msa1253030:CDS | 40.0% |
| ATGCATGTTTACCAGAGTTG+CGG | - | chr8_2:50203695-50203714 | None:intergenic | 40.0% | |
| CATGCATTGTTAGATGAGGA+TGG | + | chr8_2:50203708-50203727 | Msa1253030:CDS | 40.0% | |
| TTGTCAGACGAAGATTGTTC+TGG | + | chr8_2:50203735-50203754 | Msa1253030:CDS | 40.0% | |
| !!! | GATTGTTCTGGTTTTGATCG+TGG | + | chr8_2:50203747-50203766 | Msa1253030:CDS | 40.0% |
| ! | TGATTTTGCTAGCCAGAAGT+TGG | + | chr8_2:50203872-50203891 | Msa1253030:CDS | 40.0% |
| TTGGCAGATAATCCAACTTC+TGG | - | chr8_2:50203887-50203906 | None:intergenic | 40.0% | |
| AAATGAAGGGAAGTTCGATG+GGG | - | chr8_2:50201757-50201776 | None:intergenic | 40.0% | |
| GAAATGAAGGGAAGTTCGAT+GGG | - | chr8_2:50201758-50201777 | None:intergenic | 40.0% | |
| AGAAATGAAGGGAAGTTCGA+TGG | - | chr8_2:50201759-50201778 | None:intergenic | 40.0% | |
| GTTGGAGTTACAGTGAATAG+AGG | - | chr8_2:50201805-50201824 | None:intergenic | 40.0% | |
| !! | TCATTTTTCGAAGGTGGAGT+TGG | - | chr8_2:50201823-50201842 | None:intergenic | 40.0% |
| !! | GGTTGATCATTTTTCGAAGG+TGG | - | chr8_2:50201829-50201848 | None:intergenic | 40.0% |
| ! | GAGTGGGTTCTGATATGAAT+AGG | - | chr8_2:50201850-50201869 | None:intergenic | 40.0% |
| ACTTCGAATCCACCTATTGA+AGG | + | chr8_2:50201907-50201926 | Msa1253030:CDS | 40.0% | |
| AATCCACCTATTGAAGGAAC+TGG | + | chr8_2:50201913-50201932 | Msa1253030:CDS | 40.0% | |
| TTTCCAGTTCCTTCAATAGG+TGG | - | chr8_2:50201919-50201938 | None:intergenic | 40.0% | |
| GGCAAAACTAATCCTACTCT+AGG | + | chr8_2:50202363-50202382 | Msa1253030:intron | 40.0% | |
| ! | TGTGTGTTTGGTTCCACATT+TGG | - | chr8_2:50202441-50202460 | None:intergenic | 40.0% |
| !! | GCTGTTTTCGTAAGCTATCT+AGG | + | chr8_2:50202628-50202647 | Msa1253030:intron | 40.0% |
| !! | CATTTCATGGATTGGAACAG+GGG | + | chr8_2:50202866-50202885 | Msa1253030:CDS | 40.0% |
| ! | GGATATTTGTTGGGAAGAGT+TGG | + | chr8_2:50202930-50202949 | Msa1253030:CDS | 40.0% |
| TTGGAGTGGAAAGGAAAACA+TGG | + | chr8_2:50202949-50202968 | Msa1253030:CDS | 40.0% | |
| GCCTCATTACTTTCTCGATT+TGG | + | chr8_2:50202999-50203018 | Msa1253030:CDS | 40.0% | |
| GTTTCTGAGTCTGTGAAAGA+CGG | + | chr8_2:50203084-50203103 | Msa1253030:CDS | 40.0% | |
| GAGAGGATTCGAATGATGTA+TGG | + | chr8_2:50203166-50203185 | Msa1253030:CDS | 40.0% | |
| !! | GCAGGATTTGTGTTACTTTG+TGG | + | chr8_2:50203263-50203282 | Msa1253030:CDS | 40.0% |
| AACCTCGCAATTCAATTCTC+GGG | - | chr8_2:50203311-50203330 | None:intergenic | 40.0% | |
| GAGAATTGAATTGCGAGGTT+TGG | + | chr8_2:50203311-50203330 | Msa1253030:CDS | 40.0% | |
| ! | GAGGTTTGGATGATTTGTCT+CGG | + | chr8_2:50203325-50203344 | Msa1253030:CDS | 40.0% |
| ! | TGATTTGTCTCGGTTGTTTG+TGG | + | chr8_2:50203335-50203354 | Msa1253030:CDS | 40.0% |
| !!! | GTGGTTGTTCTTTTGAAGTG+TGG | + | chr8_2:50203354-50203373 | Msa1253030:CDS | 40.0% |
| !!! | GGTTGTTCTTTTGAAGTGTG+GGG | + | chr8_2:50203356-50203375 | Msa1253030:CDS | 40.0% |
| ! | TAAGATGGAAACTCTGGAAG+TGG | + | chr8_2:50203563-50203582 | Msa1253030:CDS | 40.0% |
| ATGCATGTTTACCAGAGTTG+CGG | - | chr8_2:50203695-50203714 | None:intergenic | 40.0% | |
| CATGCATTGTTAGATGAGGA+TGG | + | chr8_2:50203708-50203727 | Msa1253030:CDS | 40.0% | |
| TTGTCAGACGAAGATTGTTC+TGG | + | chr8_2:50203735-50203754 | Msa1253030:CDS | 40.0% | |
| !!! | GATTGTTCTGGTTTTGATCG+TGG | + | chr8_2:50203747-50203766 | Msa1253030:CDS | 40.0% |
| ! | TGATTTTGCTAGCCAGAAGT+TGG | + | chr8_2:50203872-50203891 | Msa1253030:CDS | 40.0% |
| TTGGCAGATAATCCAACTTC+TGG | - | chr8_2:50203887-50203906 | None:intergenic | 40.0% | |
| CGTGTGATTTGAAGAAGCAG+CGG | - | chr8_2:50201666-50201685 | None:intergenic | 45.0% | |
| GAGGAAGAAGATGATAGGCA+CGG | - | chr8_2:50201715-50201734 | None:intergenic | 45.0% | |
| ATGGGGTGAAAACCCTAATG+CGG | - | chr8_2:50201740-50201759 | None:intergenic | 45.0% | |
| ! | TTTGCGTCGTTGTTTCGAGT+GGG | - | chr8_2:50201866-50201885 | None:intergenic | 45.0% |
| CGGTTTCCAGTTCCTTCAAT+AGG | - | chr8_2:50201922-50201941 | None:intergenic | 45.0% | |
| AAAATTTCACGCTGGTCACG+AGG | - | chr8_2:50202031-50202050 | None:intergenic | 45.0% | |
| GATAACTCACCGCAAAAGCT+TGG | + | chr8_2:50202118-50202137 | Msa1253030:CDS | 45.0% | |
| !! | AGTGTATGTTTGGTTCTGCG+TGG | + | chr8_2:50202214-50202233 | Msa1253030:intron | 45.0% |
| ! | GTGTTTGGTTCCACATTTGG+AGG | - | chr8_2:50202438-50202457 | None:intergenic | 45.0% |
| TGTGGAACCAAACACACACT+TGG | + | chr8_2:50202443-50202462 | Msa1253030:intron | 45.0% | |
| CAATACGGGCCTGTTTGAAT+TGG | - | chr8_2:50202766-50202785 | None:intergenic | 45.0% | |
| !! | ATGGATTGGAACAGGGGAAA+GGG | + | chr8_2:50202872-50202891 | Msa1253030:CDS | 45.0% |
| TTTGTTGGGAAGAGTTGGAG+TGG | + | chr8_2:50202935-50202954 | Msa1253030:CDS | 45.0% | |
| ACATGGACAATCACCTGCAA+TGG | + | chr8_2:50202966-50202985 | Msa1253030:CDS | 45.0% | |
| !!! | CTTTTGAAGTGTGGGGTTTC+TGG | + | chr8_2:50203363-50203382 | Msa1253030:CDS | 45.0% |
| ! | GGGTTTCTGGATCTATTGAC+TGG | + | chr8_2:50203376-50203395 | Msa1253030:CDS | 45.0% |
| TTGAATGCCGTCATAGCTCA+GGG | + | chr8_2:50203408-50203427 | Msa1253030:CDS | 45.0% | |
| AGTGTCTTGGACTTCAGTCT+TGG | + | chr8_2:50203589-50203608 | Msa1253030:CDS | 45.0% | |
| GTGTCTTGGACTTCAGTCTT+GGG | + | chr8_2:50203590-50203609 | Msa1253030:CDS | 45.0% | |
| AAGCTAGAAAGAAGAGGAGG+AGG | + | chr8_2:50203805-50203824 | Msa1253030:CDS | 45.0% | |
| AGCTAGAAAGAAGAGGAGGA+GGG | + | chr8_2:50203806-50203825 | Msa1253030:CDS | 45.0% | |
| ! | AGGAGGGCATATGATTACGA+TGG | + | chr8_2:50203822-50203841 | Msa1253030:CDS | 45.0% |
| CGTGTGATTTGAAGAAGCAG+CGG | - | chr8_2:50201666-50201685 | None:intergenic | 45.0% | |
| GAGGAAGAAGATGATAGGCA+CGG | - | chr8_2:50201715-50201734 | None:intergenic | 45.0% | |
| ATGGGGTGAAAACCCTAATG+CGG | - | chr8_2:50201740-50201759 | None:intergenic | 45.0% | |
| ! | TTTGCGTCGTTGTTTCGAGT+GGG | - | chr8_2:50201866-50201885 | None:intergenic | 45.0% |
| CGGTTTCCAGTTCCTTCAAT+AGG | - | chr8_2:50201922-50201941 | None:intergenic | 45.0% | |
| AAAATTTCACGCTGGTCACG+AGG | - | chr8_2:50202031-50202050 | None:intergenic | 45.0% | |
| GATAACTCACCGCAAAAGCT+TGG | + | chr8_2:50202118-50202137 | Msa1253030:CDS | 45.0% | |
| !! | AGTGTATGTTTGGTTCTGCG+TGG | + | chr8_2:50202214-50202233 | Msa1253030:intron | 45.0% |
| ! | GTGTTTGGTTCCACATTTGG+AGG | - | chr8_2:50202438-50202457 | None:intergenic | 45.0% |
| TGTGGAACCAAACACACACT+TGG | + | chr8_2:50202443-50202462 | Msa1253030:intron | 45.0% | |
| CAATACGGGCCTGTTTGAAT+TGG | - | chr8_2:50202766-50202785 | None:intergenic | 45.0% | |
| !! | ATGGATTGGAACAGGGGAAA+GGG | + | chr8_2:50202872-50202891 | Msa1253030:CDS | 45.0% |
| TTTGTTGGGAAGAGTTGGAG+TGG | + | chr8_2:50202935-50202954 | Msa1253030:CDS | 45.0% | |
| ACATGGACAATCACCTGCAA+TGG | + | chr8_2:50202966-50202985 | Msa1253030:CDS | 45.0% | |
| !!! | CTTTTGAAGTGTGGGGTTTC+TGG | + | chr8_2:50203363-50203382 | Msa1253030:CDS | 45.0% |
| ! | GGGTTTCTGGATCTATTGAC+TGG | + | chr8_2:50203376-50203395 | Msa1253030:CDS | 45.0% |
| TTGAATGCCGTCATAGCTCA+GGG | + | chr8_2:50203408-50203427 | Msa1253030:CDS | 45.0% | |
| AGTGTCTTGGACTTCAGTCT+TGG | + | chr8_2:50203589-50203608 | Msa1253030:CDS | 45.0% | |
| GTGTCTTGGACTTCAGTCTT+GGG | + | chr8_2:50203590-50203609 | Msa1253030:CDS | 45.0% | |
| AAGCTAGAAAGAAGAGGAGG+AGG | + | chr8_2:50203805-50203824 | Msa1253030:CDS | 45.0% | |
| AGCTAGAAAGAAGAGGAGGA+GGG | + | chr8_2:50203806-50203825 | Msa1253030:CDS | 45.0% | |
| ! | AGGAGGGCATATGATTACGA+TGG | + | chr8_2:50203822-50203841 | Msa1253030:CDS | 45.0% |
| CGGTGGAGGAAGAAGATGAT+AGG | - | chr8_2:50201720-50201739 | None:intergenic | 50.0% | |
| TCTTCTTCCTCCACCGCATT+AGG | + | chr8_2:50201724-50201743 | Msa1253030:five_prime_UTR | 50.0% | |
| CTTCTTCCTCCACCGCATTA+GGG | + | chr8_2:50201725-50201744 | Msa1253030:five_prime_UTR | 50.0% | |
| TGAAAACCCTAATGCGGTGG+AGG | - | chr8_2:50201734-50201753 | None:intergenic | 50.0% | |
| ! | GTTTGCGTCGTTGTTTCGAG+TGG | - | chr8_2:50201867-50201886 | None:intergenic | 50.0% |
| AGGAACTGGAAACCGTTCTC+TGG | + | chr8_2:50201927-50201946 | Msa1253030:CDS | 50.0% | |
| GATTATCGCGGACCAGAGAA+CGG | - | chr8_2:50201942-50201961 | None:intergenic | 50.0% | |
| TGGTCCGCGATAATCTCTTC+CGG | + | chr8_2:50201947-50201966 | Msa1253030:CDS | 50.0% | |
| !! | TGAATCCCGCGATGGTTTTG+CGG | - | chr8_2:50201997-50202016 | None:intergenic | 50.0% |
| GCGAGATCGTGCTTCTTCTT+TGG | - | chr8_2:50202073-50202092 | None:intergenic | 50.0% | |
| AACAGGGCCAAGTGTGTGTT+TGG | - | chr8_2:50202453-50202472 | None:intergenic | 50.0% | |
| ACCACTGCAACACACGCTTA+GGG | - | chr8_2:50202843-50202862 | None:intergenic | 50.0% | |
| AACCACTGCAACACACGCTT+AGG | - | chr8_2:50202844-50202863 | None:intergenic | 50.0% | |
| !! | CATGGATTGGAACAGGGGAA+AGG | + | chr8_2:50202871-50202890 | Msa1253030:CDS | 50.0% |
| TGGGAAGAGTTGGAGTGGAA+AGG | + | chr8_2:50202940-50202959 | Msa1253030:CDS | 50.0% | |
| ! | GGCTTTGTAGCAACCATTGC+AGG | - | chr8_2:50202982-50203001 | None:intergenic | 50.0% |
| GACCCGAGAATTGAATTGCG+AGG | + | chr8_2:50203306-50203325 | Msa1253030:CDS | 50.0% | |
| GTTGAATGCCGTCATAGCTC+AGG | + | chr8_2:50203407-50203426 | Msa1253030:CDS | 50.0% | |
| TGAATGCCGTCATAGCTCAG+GGG | + | chr8_2:50203409-50203428 | Msa1253030:CDS | 50.0% | |
| ! | AAGGCTTTTGCGTGACGAAG+AGG | + | chr8_2:50203443-50203462 | Msa1253030:CDS | 50.0% |
| ! | CTGGAAGTGGTGAAGTGTCT+TGG | + | chr8_2:50203576-50203595 | Msa1253030:CDS | 50.0% |
| ! | ATGCAAAAAGACGGACTCCC+AGG | - | chr8_2:50203658-50203677 | None:intergenic | 50.0% |
| !! | CAGATTGGTTTCCGCAACTC+TGG | + | chr8_2:50203681-50203700 | Msa1253030:CDS | 50.0% |
| CTGACGAGTACTCTTCTGCA+TGG | + | chr8_2:50203931-50203950 | Msa1253030:CDS | 50.0% | |
| CGGTGGAGGAAGAAGATGAT+AGG | - | chr8_2:50201720-50201739 | None:intergenic | 50.0% | |
| TCTTCTTCCTCCACCGCATT+AGG | + | chr8_2:50201724-50201743 | Msa1253030:five_prime_UTR | 50.0% | |
| CTTCTTCCTCCACCGCATTA+GGG | + | chr8_2:50201725-50201744 | Msa1253030:five_prime_UTR | 50.0% | |
| TGAAAACCCTAATGCGGTGG+AGG | - | chr8_2:50201734-50201753 | None:intergenic | 50.0% | |
| ! | GTTTGCGTCGTTGTTTCGAG+TGG | - | chr8_2:50201867-50201886 | None:intergenic | 50.0% |
| AGGAACTGGAAACCGTTCTC+TGG | + | chr8_2:50201927-50201946 | Msa1253030:CDS | 50.0% | |
| GATTATCGCGGACCAGAGAA+CGG | - | chr8_2:50201942-50201961 | None:intergenic | 50.0% | |
| TGGTCCGCGATAATCTCTTC+CGG | + | chr8_2:50201947-50201966 | Msa1253030:CDS | 50.0% | |
| !! | TGAATCCCGCGATGGTTTTG+CGG | - | chr8_2:50201997-50202016 | None:intergenic | 50.0% |
| GCGAGATCGTGCTTCTTCTT+TGG | - | chr8_2:50202073-50202092 | None:intergenic | 50.0% | |
| AACAGGGCCAAGTGTGTGTT+TGG | - | chr8_2:50202453-50202472 | None:intergenic | 50.0% | |
| ACCACTGCAACACACGCTTA+GGG | - | chr8_2:50202843-50202862 | None:intergenic | 50.0% | |
| AACCACTGCAACACACGCTT+AGG | - | chr8_2:50202844-50202863 | None:intergenic | 50.0% | |
| !! | CATGGATTGGAACAGGGGAA+AGG | + | chr8_2:50202871-50202890 | Msa1253030:CDS | 50.0% |
| TGGGAAGAGTTGGAGTGGAA+AGG | + | chr8_2:50202940-50202959 | Msa1253030:CDS | 50.0% | |
| ! | GGCTTTGTAGCAACCATTGC+AGG | - | chr8_2:50202982-50203001 | None:intergenic | 50.0% |
| GACCCGAGAATTGAATTGCG+AGG | + | chr8_2:50203306-50203325 | Msa1253030:CDS | 50.0% | |
| GTTGAATGCCGTCATAGCTC+AGG | + | chr8_2:50203407-50203426 | Msa1253030:CDS | 50.0% | |
| TGAATGCCGTCATAGCTCAG+GGG | + | chr8_2:50203409-50203428 | Msa1253030:CDS | 50.0% | |
| ! | AAGGCTTTTGCGTGACGAAG+AGG | + | chr8_2:50203443-50203462 | Msa1253030:CDS | 50.0% |
| ! | CTGGAAGTGGTGAAGTGTCT+TGG | + | chr8_2:50203576-50203595 | Msa1253030:CDS | 50.0% |
| ! | ATGCAAAAAGACGGACTCCC+AGG | - | chr8_2:50203658-50203677 | None:intergenic | 50.0% |
| !! | CAGATTGGTTTCCGCAACTC+TGG | + | chr8_2:50203681-50203700 | Msa1253030:CDS | 50.0% |
| CTGACGAGTACTCTTCTGCA+TGG | + | chr8_2:50203931-50203950 | Msa1253030:CDS | 50.0% | |
| ! | TGATAGGCACGGCGTCGTTT+TGG | - | chr8_2:50201704-50201723 | None:intergenic | 55.0% |
| GGGTGAAAACCCTAATGCGG+TGG | - | chr8_2:50201737-50201756 | None:intergenic | 55.0% | |
| CGAAACAACGACGCAAACGC+AGG | + | chr8_2:50201869-50201888 | Msa1253030:CDS | 55.0% | |
| GCGACCGGAAGAGATTATCG+CGG | - | chr8_2:50201954-50201973 | None:intergenic | 55.0% | |
| GATGCAGTTGAATCCCGCGA+TGG | - | chr8_2:50202005-50202024 | None:intergenic | 55.0% | |
| ACCCTAAGCGTGTGTTGCAG+TGG | + | chr8_2:50202839-50202858 | Msa1253030:CDS | 55.0% | |
| TTTGCGTGACGAAGAGGCCA+AGG | + | chr8_2:50203449-50203468 | Msa1253030:CDS | 55.0% | |
| AGTGCAAGACTCCTGAGTCC+TGG | + | chr8_2:50203637-50203656 | Msa1253030:CDS | 55.0% | |
| GTGCAAGACTCCTGAGTCCT+GGG | + | chr8_2:50203638-50203657 | Msa1253030:CDS | 55.0% | |
| ! | TGATAGGCACGGCGTCGTTT+TGG | - | chr8_2:50201704-50201723 | None:intergenic | 55.0% |
| GGGTGAAAACCCTAATGCGG+TGG | - | chr8_2:50201737-50201756 | None:intergenic | 55.0% | |
| CGAAACAACGACGCAAACGC+AGG | + | chr8_2:50201869-50201888 | Msa1253030:CDS | 55.0% | |
| GCGACCGGAAGAGATTATCG+CGG | - | chr8_2:50201954-50201973 | None:intergenic | 55.0% | |
| GATGCAGTTGAATCCCGCGA+TGG | - | chr8_2:50202005-50202024 | None:intergenic | 55.0% | |
| ACCCTAAGCGTGTGTTGCAG+TGG | + | chr8_2:50202839-50202858 | Msa1253030:CDS | 55.0% | |
| TTTGCGTGACGAAGAGGCCA+AGG | + | chr8_2:50203449-50203468 | Msa1253030:CDS | 55.0% | |
| AGTGCAAGACTCCTGAGTCC+TGG | + | chr8_2:50203637-50203656 | Msa1253030:CDS | 55.0% | |
| GTGCAAGACTCCTGAGTCCT+GGG | + | chr8_2:50203638-50203657 | Msa1253030:CDS | 55.0% | |
| CATTCGAGCTTCTGCGCGAC+CGG | - | chr8_2:50201969-50201988 | None:intergenic | 60.0% | |
| GTCGCGCAGAAGCTCGAATG+TGG | + | chr8_2:50201969-50201988 | Msa1253030:CDS | 60.0% | |
| GTGGCTCCGCAAAACCATCG+CGG | + | chr8_2:50201988-50202007 | Msa1253030:CDS | 60.0% | |
| TGGCTCCGCAAAACCATCGC+GGG | + | chr8_2:50201989-50202008 | Msa1253030:CDS | 60.0% | |
| ATGCCGTCATAGCTCAGGGG+CGG | + | chr8_2:50203412-50203431 | Msa1253030:CDS | 60.0% | |
| GACTTTCGCCAGCGACTCCT+TGG | - | chr8_2:50203469-50203488 | None:intergenic | 60.0% | |
| ! | AAGACGGACTCCCAGGACTC+AGG | - | chr8_2:50203651-50203670 | None:intergenic | 60.0% |
| CATTCGAGCTTCTGCGCGAC+CGG | - | chr8_2:50201969-50201988 | None:intergenic | 60.0% | |
| GTCGCGCAGAAGCTCGAATG+TGG | + | chr8_2:50201969-50201988 | Msa1253030:CDS | 60.0% | |
| GTGGCTCCGCAAAACCATCG+CGG | + | chr8_2:50201988-50202007 | Msa1253030:CDS | 60.0% | |
| TGGCTCCGCAAAACCATCGC+GGG | + | chr8_2:50201989-50202008 | Msa1253030:CDS | 60.0% | |
| ATGCCGTCATAGCTCAGGGG+CGG | + | chr8_2:50203412-50203431 | Msa1253030:CDS | 60.0% | |
| GACTTTCGCCAGCGACTCCT+TGG | - | chr8_2:50203469-50203488 | None:intergenic | 60.0% | |
| ! | AAGACGGACTCCCAGGACTC+AGG | - | chr8_2:50203651-50203670 | None:intergenic | 60.0% |
| CTGCCGCCCCTGAGCTATGA+CGG | - | chr8_2:50203418-50203437 | None:intergenic | 65.0% | |
| CTCAGGGGCGGCAGCTTCTA+AGG | + | chr8_2:50203424-50203443 | Msa1253030:CDS | 65.0% | |
| CGAAGAGGCCAAGGAGTCGC+TGG | + | chr8_2:50203458-50203477 | Msa1253030:CDS | 65.0% | |
| CTGCCGCCCCTGAGCTATGA+CGG | - | chr8_2:50203418-50203437 | None:intergenic | 65.0% | |
| CTCAGGGGCGGCAGCTTCTA+AGG | + | chr8_2:50203424-50203443 | Msa1253030:CDS | 65.0% | |
| CGAAGAGGCCAAGGAGTCGC+TGG | + | chr8_2:50203458-50203477 | Msa1253030:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 50201624 | 50203998 | 50201624 | ID=Msa1253030;Name=Msa1253030 |
| chr8_2 | mRNA | 50201624 | 50203998 | 50201624 | ID=Msa1253030-mRNA-1;Parent=Msa1253030;Name=Msa1253030-mRNA-1;_AED=0.12;_eAED=0.12;_QI=215|1|0.5|1|1|1|2|0|503 |
| chr8_2 | exon | 50201624 | 50202187 | 50201624 | ID=Msa1253030-mRNA-1:exon:15333;Parent=Msa1253030-mRNA-1 |
| chr8_2 | exon | 50202836 | 50203998 | 50202836 | ID=Msa1253030-mRNA-1:exon:15334;Parent=Msa1253030-mRNA-1 |
| chr8_2 | five_prime_UTR | 50201624 | 50201838 | 50201624 | ID=Msa1253030-mRNA-1:five_prime_utr;Parent=Msa1253030-mRNA-1 |
| chr8_2 | CDS | 50201839 | 50202187 | 50201839 | ID=Msa1253030-mRNA-1:cds;Parent=Msa1253030-mRNA-1 |
| chr8_2 | CDS | 50202836 | 50203998 | 50202836 | ID=Msa1253030-mRNA-1:cds;Parent=Msa1253030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
