AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1036610


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1036610 MtrunA17_Chr7g0261061 91.128 665 19 1 1 625 1 665 0.0 1242
Msa1036610 MtrunA17_Chr1g0184231 57.269 681 217 10 1 623 1 665 0.0 731
Msa1036610 MtrunA17_Chr4g0025571 55.729 192 81 2 426 617 707 894 5.75e-59 213
Msa1036610 MtrunA17_Chr4g0025571 35.220 159 89 4 5 151 5 161 3.18e-17 85.9
Msa1036610 MtrunA17_Chr2g0322001 54.688 192 83 2 426 617 668 855 1.14e-57 208
Msa1036610 MtrunA17_Chr2g0322001 30.675 163 95 5 5 151 5 165 2.12e-14 77.0
Msa1036610 MtrunA17_Chr1g0188861 45.856 181 89 3 442 617 573 749 1.69e-43 166
Msa1036610 MtrunA17_Chr1g0188861 31.788 151 65 4 1 149 5 119 1.08e-13 74.3
Msa1036610 MtrunA17_Chr7g0239641 37.282 287 153 9 342 608 387 666 5.40e-40 155
Msa1036610 MtrunA17_Chr7g0239641 35.443 158 85 4 5 150 6 158 1.26e-21 99.8
Msa1036610 MtrunA17_Chr1g0152981 29.651 172 93 8 5 152 12 179 6.12e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1036610 AT2G31280.2 36.351 707 282 20 7 596 33 688 7.51e-108 341
Msa1036610 AT1G06150.2 49.614 389 172 6 255 621 348 734 1.01e-95 310
Msa1036610 AT1G06150.2 51.316 152 63 2 1 152 1 141 1.10e-40 158
Msa1036610 AT1G06150.1 49.871 389 169 7 255 621 348 732 1.64e-94 306
Msa1036610 AT1G06150.1 51.316 152 63 2 1 152 1 141 1.00e-40 158
Msa1036610 AT2G31280.1 50.294 340 145 6 294 620 388 716 9.27e-86 283
Msa1036610 AT2G31280.1 53.061 147 49 4 7 152 7 134 5.15e-39 153
Msa1036610 AT2G31280.3 47.899 357 145 7 294 620 388 733 1.12e-81 273
Msa1036610 AT2G31280.3 52.703 148 50 4 6 152 6 134 5.93e-39 153
Msa1036610 AT2G27230.2 39.792 289 145 6 341 617 349 620 2.76e-51 188
Msa1036610 AT2G27230.2 36.735 147 82 5 5 149 5 142 2.29e-16 83.2
Msa1036610 AT2G27230.1 39.792 289 145 6 341 617 349 620 2.76e-51 188
Msa1036610 AT2G27230.1 36.735 147 82 5 5 149 5 142 2.29e-16 83.2
Msa1036610 AT1G64625.3 48.352 182 79 2 436 617 327 493 2.29e-46 171
Msa1036610 AT1G64625.2 48.352 182 79 2 436 617 341 507 2.92e-46 171
Msa1036610 AT1G64625.1 48.352 182 79 2 436 617 351 517 3.35e-46 171
Msa1036610 AT1G64625.4 64.286 70 25 0 436 505 341 410 3.40e-24 106
Msa1036610 AT3G15240.2 30.128 156 96 5 5 149 34 187 1.62e-13 72.8
Msa1036610 AT5G53900.2 30.120 166 85 7 5 149 21 176 1.44e-11 67.0

Find 189 sgRNAs with CRISPR-Local

Find 477 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACACAACTCATTCTGCTTAT+TGG 0.152338 7_1:-73032343 Msa1036610:CDS
ATGACATATCAAAGTGTTTA+AGG 0.178131 7_1:+73036140 None:intergenic
TTGCATTCAATTTATTATTA+TGG 0.194889 7_1:-73036064 Msa1036610:five_prime_UTR
TTGACGCCCCTTCAATGTTC+TGG 0.198121 7_1:-73032374 Msa1036610:CDS
ATTGACTTTGGAGACTAATA+AGG 0.209169 7_1:+73036722 None:intergenic
ACAGAGGAAGTTAGCTAGTT+AGG 0.220301 7_1:-73035807 Msa1036610:five_prime_UTR
TGACTTATGAGTATACTTTA+TGG 0.222832 7_1:+73036857 None:intergenic
CTTCTGCTATTTCAAGAAAA+TGG 0.233515 7_1:+73030352 None:intergenic
ACCTCTTTCTTAAACTCTTT+TGG 0.245507 7_1:+73036523 None:intergenic
CACAACTCATTCTGCTTATT+GGG 0.245900 7_1:-73032342 Msa1036610:CDS
ATCCTCCATGAAGTTCCTTT+TGG 0.266459 7_1:-73036754 Msa1036610:five_prime_UTR
CCACACTCCCTCGCATTTAC+AGG 0.273451 7_1:+73032197 None:intergenic
AATAATCAAGTTACAAGTTC+TGG 0.277737 7_1:-73034485 Msa1036610:CDS
AGACATTGACTGAAGCAAAA+TGG 0.289702 7_1:+73032262 None:intergenic
ATCTCATCCAGAGCATCTTT+TGG 0.297480 7_1:-73031883 Msa1036610:CDS
AGTGGAATTATGCAATCTTT+TGG 0.303004 7_1:-73035594 Msa1036610:CDS
TCATTCTGCTTATTGGGAAA+TGG 0.305416 7_1:-73032336 Msa1036610:CDS
TAATCATACCCTTGCCCTAA+TGG 0.307412 7_1:+73034631 None:intergenic
GTTGGGCAGGTAGCTGTTAC+TGG 0.308114 7_1:-73034533 Msa1036610:CDS
GAACGAAATTACAAAATAAA+AGG 0.314287 7_1:-73036554 Msa1036610:five_prime_UTR
TCATATAATGCATATCCATT+AGG 0.320068 7_1:-73034646 Msa1036610:CDS
CCCACCCTCAATCTGTTCTA+AGG 0.320262 7_1:+73034711 None:intergenic
AATGTGGAGCATCAGGAATT+TGG 0.324771 7_1:-73032230 Msa1036610:CDS
TTCTGTTTAATTTACCGATT+AGG 0.330925 7_1:-73035982 Msa1036610:five_prime_UTR
GCAAGAAGAGGGCCAGGCCT+GGG 0.333975 7_1:-73031599 Msa1036610:CDS
TCTGTTTAATTTACCGATTA+GGG 0.342230 7_1:-73035981 Msa1036610:five_prime_UTR
TGCATTCTAATCTTATGTTT+AGG 0.346668 7_1:-73036649 Msa1036610:five_prime_UTR
GAGTTCTGGTGACCAATAAA+AGG 0.353943 7_1:+73029707 None:intergenic
GAAAGTTCATTCAATATTAG+TGG 0.354416 7_1:-73030585 Msa1036610:CDS
GCAGAAGCTGTAAGAAGCTT+GGG 0.363557 7_1:-73030336 Msa1036610:CDS
TGACGCCCCTTCAATGTTCT+GGG 0.364838 7_1:-73032373 Msa1036610:CDS
AGAGCTTAATAAGAAAAGTA+TGG 0.365328 7_1:-73029459 Msa1036610:three_prime_UTR
AATCACATCACAATATATAA+TGG 0.368044 7_1:+73029414 None:intergenic
TTCAAACTTTACTCCCTAAT+CGG 0.368322 7_1:+73035968 None:intergenic
CATATAATGCATATCCATTA+GGG 0.368715 7_1:-73034645 Msa1036610:CDS
ATGCAATCTGCATTGAGTTC+TGG 0.368808 7_1:-73031789 Msa1036610:CDS
TTCTTCTTCTATATTGTAGT+TGG 0.369340 7_1:+73036342 None:intergenic
TTGGGAAATGGGTGATAATA+TGG 0.369765 7_1:-73032324 Msa1036610:CDS
TTCAAGTGTAATAGAGGGTT+TGG 0.369787 7_1:-73036005 Msa1036610:five_prime_UTR
TTTGATTGTATGTTTGTGTT+TGG 0.374751 7_1:-73029578 Msa1036610:three_prime_UTR
TAACATTAGCATCCACCATT+AGG 0.380986 7_1:+73036801 None:intergenic
CAGAGGAAGTTAGCTAGTTA+GGG 0.384167 7_1:-73035806 Msa1036610:five_prime_UTR
TTCTGAGCAGGGTTCAAGTT+GGG 0.392393 7_1:-73030630 Msa1036610:CDS
CAAGTTGGGCAGTTGAGGTA+GGG 0.392788 7_1:-73030616 Msa1036610:CDS
AGCAAGAAGAGGGCCAGGCC+TGG 0.394004 7_1:-73031600 Msa1036610:CDS
GGAACTTCATGGAGGATTAG+AGG 0.394934 7_1:+73036760 None:intergenic
CCATTAGGACAAATCCAAAA+AGG 0.396210 7_1:+73036816 None:intergenic
CATTCTGCTTATTGGGAAAT+GGG 0.399460 7_1:-73032335 Msa1036610:CDS
TGGATCCTCTAGTTCTGAGC+AGG 0.399527 7_1:-73030642 Msa1036610:CDS
TCCTTTGTTTACAGTATTGT+TGG 0.400842 7_1:-73034551 Msa1036610:intron
TTTGCTTGAGGGTGTCTTTG+AGG 0.401530 7_1:-73035704 Msa1036610:five_prime_UTR
TGGATCAGTTGCCTGTCTCT+TGG 0.401708 7_1:+73031558 None:intergenic
TGATCATCAAAAGATAAATC+TGG 0.403829 7_1:+73029501 None:intergenic
TAAGCTCCTTAATTCGATCT+TGG 0.404174 7_1:+73031538 None:intergenic
ATTACAAAATAAAAGGTTAG+AGG 0.410039 7_1:-73036547 Msa1036610:five_prime_UTR
CAAAGACACCCTCAAGCAAA+AGG 0.411836 7_1:+73035707 None:intergenic
ACTGATCCAAGATCGAATTA+AGG 0.412041 7_1:-73031544 Msa1036610:CDS
CTCATAAGTCATAACCCAAT+TGG 0.417840 7_1:-73036845 Msa1036610:five_prime_UTR
CCCCTAGGCGTTGTTCAGCT+TGG 0.419014 7_1:-73033684 Msa1036610:CDS
AGTAATAATGATGTTAATAG+TGG 0.420137 7_1:-73031831 Msa1036610:CDS
TCAAGTTGGGCAGTTGAGGT+AGG 0.422938 7_1:-73030617 Msa1036610:CDS
ATAAATCTGGAACATCAAAA+AGG 0.423107 7_1:+73029514 None:intergenic
GACATTGACTGAAGCAAAAT+GGG 0.423409 7_1:+73032263 None:intergenic
CAGAGATCAAGAATGAGTTC+TGG 0.426182 7_1:+73029693 None:intergenic
AAGTCCCAAAAGGAACTTCA+TGG 0.432399 7_1:+73036749 None:intergenic
TTGACTTTGGAGACTAATAA+GGG 0.438097 7_1:+73036723 None:intergenic
GCCAAAAGAGTTTAAGAAAG+AGG 0.439597 7_1:-73036524 Msa1036610:five_prime_UTR
AACAGTAACTGTTTGATTCG+TGG 0.442090 7_1:-73029741 Msa1036610:exon
TTACTCCCTTTCAAAGAAGA+TGG 0.443135 7_1:+73031993 None:intergenic
TGGAAACTTCAACGGTGTAT+AGG 0.443844 7_1:+73032046 None:intergenic
CTGTTGATACACAACGCTCT+TGG 0.444435 7_1:+73029759 None:intergenic
CGCCATTAAAACGGCGAGCT+GGG 0.446408 7_1:-73035861 Msa1036610:five_prime_UTR
TATGATTAATGTGGAGCATC+AGG 0.449098 7_1:-73032237 Msa1036610:CDS
GAAGAGAACCGCCATTAAAA+CGG 0.451794 7_1:-73035870 Msa1036610:five_prime_UTR
TTTGATTCGTGGAAACTTCA+CGG 0.452890 7_1:-73029730 Msa1036610:three_prime_UTR
AGCAGAAGCTGTAAGAAGCT+TGG 0.453234 7_1:-73030337 Msa1036610:CDS
GAGAATGAGCTTGTAGTAGT+TGG 0.454136 7_1:+73036249 None:intergenic
CAAATGGAAACAGACATTCT+TGG 0.454352 7_1:-73030662 Msa1036610:CDS
TCTACAACTTTCCCCAGGCC+TGG 0.456634 7_1:+73031587 None:intergenic
CCGCCATTAAAACGGCGAGC+TGG 0.457090 7_1:-73035862 Msa1036610:five_prime_UTR
ATTGCTTCCAAAAGATGCTC+TGG 0.457697 7_1:+73031876 None:intergenic
TGACATATCAAAGTGTTTAA+GGG 0.458315 7_1:+73036141 None:intergenic
CTTGGACCATCTTCTTTGAA+AGG 0.461847 7_1:-73031999 Msa1036610:CDS
GATAATATGGTCAAGCATGA+AGG 0.464680 7_1:-73032311 Msa1036610:CDS
TTGTGGTGTGAGTGATGGGT+TGG 0.466870 7_1:-73035918 Msa1036610:five_prime_UTR
TGTGGTGTGAGTGATGGGTT+GGG 0.468455 7_1:-73035917 Msa1036610:five_prime_UTR
CCTTTGTTTACAGTATTGTT+GGG 0.473762 7_1:-73034550 Msa1036610:intron
TGTTTACAGTATTGTTGGGC+AGG 0.476243 7_1:-73034546 Msa1036610:intron
TTGCTGAGAAGAAAGTGAAT+AGG 0.482185 7_1:+73036275 None:intergenic
AAGTTGGGCAGTTGAGGTAG+GGG 0.482715 7_1:-73030615 Msa1036610:CDS
TTCAATACACCAATCGGAAA+AGG 0.488411 7_1:-73032075 Msa1036610:CDS
CTATGATTCAATACACCAAT+CGG 0.489438 7_1:-73032081 Msa1036610:CDS
TTGGACCATCTTCTTTGAAA+GGG 0.489648 7_1:-73031998 Msa1036610:CDS
TTGTCCTCTCTGACAAGAGA+AGG 0.489749 7_1:+73031720 None:intergenic
TGTTCCTCCCAGAACATTGA+AGG 0.492163 7_1:+73032366 None:intergenic
GTAGACCTCGGCCAAGAGAC+AGG 0.493853 7_1:-73031569 Msa1036610:CDS
TTATAAGGGGAAGAAGAAGA+TGG 0.495358 7_1:-73035662 Msa1036610:exon
CGGAGGAAGCAAGCTGGAAG+AGG 0.495959 7_1:-73035835 Msa1036610:five_prime_UTR
TTGCAGGATCTTGACATTGG+AGG 0.497906 7_1:-73034794 Msa1036610:intron
CAAGAAGAGGGCCAGGCCTG+GGG 0.498222 7_1:-73031598 Msa1036610:CDS
AATGCGAGGGAGTGTGGAGG+GGG 0.499268 7_1:-73032191 Msa1036610:CDS
TCGAATGTTGTTAGAGGGAA+AGG 0.499516 7_1:+73036446 None:intergenic
GGGTTCAAGTTGGGCAGTTG+AGG 0.499697 7_1:-73030621 Msa1036610:CDS
AAATGTAACTTTAGAAGGAA+AGG 0.500891 7_1:+73036471 None:intergenic
GTTGTCTCGAATGTTGTTAG+AGG 0.501679 7_1:+73036440 None:intergenic
TAAAACGGCGAGCTGGGTTG+CGG 0.503111 7_1:-73035855 Msa1036610:five_prime_UTR
AATGTAACTTTAGAAGGAAA+GGG 0.506221 7_1:+73036472 None:intergenic
GTGTAGTATTGATTCACTAC+TGG 0.507034 7_1:-73031395 Msa1036610:CDS
TAAATGCGAGGGAGTGTGGA+GGG 0.509830 7_1:-73032193 Msa1036610:CDS
AAAGTTACCTTAGCTCCATT+CGG 0.511291 7_1:+73031504 None:intergenic
ATTACTACTGTGACAGATGT+TGG 0.513389 7_1:+73031848 None:intergenic
AATTAAGGAGCTTAGAGAGT+TGG 0.520317 7_1:-73031529 Msa1036610:CDS
ACTGAGTCTTGCTCATTACA+AGG 0.524930 7_1:+73029643 None:intergenic
AAAACAGCAAGAAGAGGGCC+AGG 0.528144 7_1:-73031605 Msa1036610:CDS
CCTGTAAATGCGAGGGAGTG+TGG 0.529660 7_1:-73032197 Msa1036610:CDS
TGACTAGTGTTAAACACATC+CGG 0.531499 7_1:+73031918 None:intergenic
AATTCTGCTATAAATAATGT+TGG 0.533904 7_1:-73032107 Msa1036610:CDS
TTGTGTGATTGGAATTTGGA+GGG 0.538053 7_1:-73035764 Msa1036610:five_prime_UTR
GAAGACCTTAGAACAGATTG+AGG 0.538646 7_1:-73034716 Msa1036610:CDS
GCCAAGCTGAACAACGCCTA+GGG 0.540978 7_1:+73033683 None:intergenic
AAAGAGTGACAAAATGTCAA+TGG 0.544653 7_1:+73036299 None:intergenic
ATCGATATGCTTTATCGTTG+AGG 0.544767 7_1:-73030268 Msa1036610:intron
TTTGTGTGATTGGAATTTGG+AGG 0.545243 7_1:-73035765 Msa1036610:five_prime_UTR
GGGTTGCGGAGGAAGCAAGC+TGG 0.549832 7_1:-73035841 Msa1036610:five_prime_UTR
AGTTGCCTGTCTCTTGGCCG+AGG 0.552330 7_1:+73031564 None:intergenic
ATAATATGGTCAAGCATGAA+GGG 0.556894 7_1:-73032310 Msa1036610:CDS
TCAAGTAGTTCACATCCAGC+TGG 0.559673 7_1:+73032026 None:intergenic
ACACCGTTGAAGTTTCCAGC+TGG 0.560171 7_1:-73032041 Msa1036610:CDS
ATGCATATCCATTAGGGCAA+GGG 0.560663 7_1:-73034639 Msa1036610:intron
TATGAAAATTGCGGATGTGC+CGG 0.562668 7_1:-73031937 Msa1036610:CDS
TAGATGATGAACTCAAACAA+TGG 0.565458 7_1:+73031694 None:intergenic
TTGTCTCGAATGTTGTTAGA+GGG 0.567612 7_1:+73036441 None:intergenic
TTACAAAATAAAAGGTTAGA+GGG 0.568815 7_1:-73036546 Msa1036610:five_prime_UTR
AAAGACACCCTCAAGCAAAA+GGG 0.568843 7_1:+73035708 None:intergenic
AACGGCGAGCTGGGTTGCGG+AGG 0.569654 7_1:-73035852 Msa1036610:five_prime_UTR
ACTTGCTGATACTAAATCAA+AGG 0.571474 7_1:-73031308 Msa1036610:intron
AATGCATATCCATTAGGGCA+AGG 0.575204 7_1:-73034640 Msa1036610:CDS
CTGTTACTGGAAAGCATCAG+TGG 0.576674 7_1:-73034520 Msa1036610:CDS
CATCCAGCTGGAAACTTCAA+CGG 0.581618 7_1:+73032038 None:intergenic
CACATCTTGAATAGAAGCAT+CGG 0.581769 7_1:+73031758 None:intergenic
GTTCCTCCCAGAACATTGAA+GGG 0.582788 7_1:+73032367 None:intergenic
GTTCTGAGCAGGGTTCAAGT+TGG 0.582839 7_1:-73030631 Msa1036610:CDS
GTTGTGTCTGTAGTTCCCCT+AGG 0.584029 7_1:-73033699 Msa1036610:CDS
ACCTTAGAACAGATTGAGGG+TGG 0.585645 7_1:-73034712 Msa1036610:CDS
GGATCCTCTAGTTCTGAGCA+GGG 0.587080 7_1:-73030641 Msa1036610:CDS
CTTAGAGAGTTGGTACCGAA+TGG 0.588731 7_1:-73031519 Msa1036610:CDS
CGAGGTCTACAACTTTCCCC+AGG 0.591527 7_1:+73031582 None:intergenic
CATTCGAGAGTACTTTAGAT+CGG 0.591727 7_1:-73036418 Msa1036610:five_prime_UTR
AAATGCGAGGGAGTGTGGAG+GGG 0.591820 7_1:-73032192 Msa1036610:CDS
GATAAGACCTGTAAATGCGA+GGG 0.592645 7_1:-73032204 Msa1036610:CDS
AGTGATGGGTTGGGATTGTG+TGG 0.593340 7_1:-73035908 Msa1036610:five_prime_UTR
GTTGGTACCGAATGGAGCTA+AGG 0.594912 7_1:-73031511 Msa1036610:intron
AAACTTCAACGGTGTATAGG+AGG 0.595634 7_1:+73032049 None:intergenic
ATATTATGCCTGCGTGCATG+AGG 0.596933 7_1:-73032415 Msa1036610:CDS
TGTGAACTACTTGAAGCACT+TGG 0.597240 7_1:-73032017 Msa1036610:CDS
TACACAGATTGGACATCTTG+TGG 0.604378 7_1:-73029804 Msa1036610:CDS
AATTGTTCACTACAAGCACT+AGG 0.605309 7_1:+73031651 None:intergenic
GTCTTTGTTTCAATACTCAG+TGG 0.605365 7_1:-73035612 Msa1036610:CDS
CTGGGGAAAGTTGTAGACCT+CGG 0.606115 7_1:-73031581 Msa1036610:CDS
TGAACCCTGCTCAGAACTAG+AGG 0.606197 7_1:+73030637 None:intergenic
GTAAATGCGAGGGAGTGTGG+AGG 0.608053 7_1:-73032194 Msa1036610:CDS
AAGACCTTAGAACAGATTGA+GGG 0.608096 7_1:-73034715 Msa1036610:CDS
CAACGGACAGATGCTTATTG+AGG 0.610585 7_1:-73030549 Msa1036610:intron
CGAGAGTACTTTAGATCGGA+CGG 0.611164 7_1:-73036414 Msa1036610:five_prime_UTR
CCTCTCTGACAAGAGAAGGA+TGG 0.616107 7_1:+73031724 None:intergenic
ACTCACATCACTATAGAGCT+CGG 0.616116 7_1:+73032286 None:intergenic
AGTTGGGCAGTTGAGGTAGG+GGG 0.617248 7_1:-73030614 Msa1036610:CDS
GATTGTAGTATCTGAACAAG+TGG 0.620442 7_1:+73029781 None:intergenic
AGATAAGACCTGTAAATGCG+AGG 0.621221 7_1:-73032205 Msa1036610:CDS
TTCCTCCCAGAACATTGAAG+GGG 0.627170 7_1:+73032368 None:intergenic
TAATCAAGATATGAAAATTG+CGG 0.627898 7_1:-73031946 Msa1036610:CDS
AGCCAAGCTGAACAACGCCT+AGG 0.629984 7_1:+73033682 None:intergenic
TGTGTGGTGCTACAAACAGT+TGG 0.631625 7_1:-73035892 Msa1036610:five_prime_UTR
GGAGGAAGCAAGCTGGAAGA+GGG 0.631639 7_1:-73035834 Msa1036610:five_prime_UTR
CAGAAGCTGTAAGAAGCTTG+GGG 0.638694 7_1:-73030335 Msa1036610:CDS
CGCCCCTTCAATGTTCTGGG+AGG 0.639766 7_1:-73032370 Msa1036610:CDS
CCATCCTTCTCTTGTCAGAG+AGG 0.641149 7_1:-73031724 Msa1036610:CDS
AATGTCTGATATGATTAATG+TGG 0.647024 7_1:-73032246 Msa1036610:CDS
GGAGAATATACTGCAACTTG+CGG 0.655687 7_1:-73029438 Msa1036610:three_prime_UTR
CTGAGTCTTGCTCATTACAA+GGG 0.658378 7_1:+73029644 None:intergenic
GTCTTGCTCATTACAAGGGT+AGG 0.661672 7_1:+73029648 None:intergenic
GCTGGAAGAGGGTCTTACAG+AGG 0.669202 7_1:-73035823 Msa1036610:five_prime_UTR
TAATATGGTCAAGCATGAAG+GGG 0.670408 7_1:-73032309 Msa1036610:CDS
CCTTAGAACAGATTGAGGGT+GGG 0.678640 7_1:-73034711 Msa1036610:CDS
CTTATGAGTATACTTTATGG+TGG 0.700093 7_1:+73036860 None:intergenic
CCAAGCTGAACAACGCCTAG+GGG 0.707163 7_1:+73033684 None:intergenic
GTGGAGAATCTTAGCAACAA+CGG 0.716721 7_1:-73030566 Msa1036610:CDS
TCCCAAAAGGAACTTCATGG+AGG 0.723239 7_1:+73036752 None:intergenic
GTGCATGAGGAATAAAACAG+TGG 0.796780 7_1:-73032402 Msa1036610:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAATTAAATTATATATAAT+TGG + chr7_1:73036134-73036153 None:intergenic 0.0%
!!! TTTTTTTTTTTTTTTTTTGC+AGG - chr7_1:73031412-73031431 Msa1036610:intron 10.0%
!! TATATTATTTCAATAAAGTT+TGG + chr7_1:73032357-73032376 None:intergenic 10.0%
!! AAATATTTATTTACAGATTA+TGG + chr7_1:73034977-73034996 None:intergenic 10.0%
!! TTGCATTCAATTTATTATTA+TGG - chr7_1:73030158-73030177 Msa1036610:intron 15.0%
!!! AAAGTTTCTAACTTTTTATA+AGG - chr7_1:73030545-73030564 Msa1036610:intron 15.0%
!!! AAGTTTCTAACTTTTTATAA+GGG - chr7_1:73030546-73030565 Msa1036610:intron 15.0%
!! TTAATAAAAACAAGATGTAT+AGG + chr7_1:73031019-73031038 None:intergenic 15.0%
!! AAAAAAAATATAACATGATC+TGG + chr7_1:73031200-73031219 None:intergenic 15.0%
!! AACACTTATAATAATGATAA+TGG - chr7_1:73032206-73032225 Msa1036610:CDS 15.0%
!! TATATTTATTTGGAAAAGTA+TGG - chr7_1:73032247-73032266 Msa1036610:CDS 15.0%
!! AAAATTAAACAAACTATACA+AGG + chr7_1:73033230-73033249 None:intergenic 15.0%
!!! ATTTGTCTTATTAAATGTTA+GGG - chr7_1:73033616-73033635 Msa1036610:intron 15.0%
!! TATAAAACATAATAAATCCA+TGG + chr7_1:73036328-73036347 None:intergenic 15.0%
!!! CAAATTTTAGTTTCTATAAA+TGG - chr7_1:73036849-73036868 Msa1036610:five_prime_UTR 15.0%
!!! ATGAAACAAAAAATTGACTT+TGG + chr7_1:73029515-73029534 None:intergenic 20.0%
!!! ACATATATTTGTTTTTCTTG+TGG + chr7_1:73029613-73029632 None:intergenic 20.0%
!! CAAGAAAAACAAATATATGT+AGG - chr7_1:73029613-73029632 Msa1036610:three_prime_UTR 20.0%
!! GAACGAAATTACAAAATAAA+AGG - chr7_1:73029668-73029687 Msa1036610:three_prime_UTR 20.0%
!! ATTACAAAATAAAAGGTTAG+AGG - chr7_1:73029675-73029694 Msa1036610:three_prime_UTR 20.0%
!! TTACAAAATAAAAGGTTAGA+GGG - chr7_1:73029676-73029695 Msa1036610:three_prime_UTR 20.0%
!!! AGTTTCTAACTTTTTATAAG+GGG - chr7_1:73030547-73030566 Msa1036610:intron 20.0%
!!! CATGTATTGAATCTTTTATT+TGG - chr7_1:73030718-73030737 Msa1036610:intron 20.0%
!! GAAAAAAATATAACATGATC+TGG + chr7_1:73031048-73031067 None:intergenic 20.0%
!!! AAGATTTGAAACTTTCATTT+AGG - chr7_1:73031631-73031650 Msa1036610:CDS 20.0%
!!! CTAGATTTTCAAATTTTCTA+CGG + chr7_1:73031809-73031828 None:intergenic 20.0%
!!! TGAAAATCTAGAATTTGTAT+TGG - chr7_1:73031818-73031837 Msa1036610:CDS 20.0%
!!! GAAAATCTAGAATTTGTATT+GGG - chr7_1:73031819-73031838 Msa1036610:CDS 20.0%
!! AACTGAAAATCAAACAAAAA+GGG + chr7_1:73031896-73031915 None:intergenic 20.0%
!! AAACTGAAAATCAAACAAAA+AGG + chr7_1:73031897-73031916 None:intergenic 20.0%
!!! ATGTTGATGGTATATTTATT+TGG - chr7_1:73032237-73032256 Msa1036610:CDS 20.0%
!!! TTTAAAACACAACAAATACA+AGG + chr7_1:73032660-73032679 None:intergenic 20.0%
!!! GATTTGTCTTATTAAATGTT+AGG - chr7_1:73033615-73033634 Msa1036610:intron 20.0%
!!! TTTGTCTTATTAAATGTTAG+GGG - chr7_1:73033617-73033636 Msa1036610:intron 20.0%
!! ATCCTGGTTAAAAATAATTA+TGG + chr7_1:73033716-73033735 None:intergenic 20.0%
!! AATTCTGCTATAAATAATGT+TGG - chr7_1:73034115-73034134 Msa1036610:intron 20.0%
!! TAATCAAGATATGAAAATTG+CGG - chr7_1:73034276-73034295 Msa1036610:intron 20.0%
!! AGTAATAATGATGTTAATAG+TGG - chr7_1:73034391-73034410 Msa1036610:intron 20.0%
!!! ACTACATTTTATATCAAGTT+GGG - chr7_1:73034998-73035017 Msa1036610:intron 20.0%
!! TTTGCATACATACAAAATTA+TGG - chr7_1:73035042-73035061 Msa1036610:intron 20.0%
!! TTAAAACTACTAAAAAGGAA+TGG + chr7_1:73035088-73035107 None:intergenic 20.0%
!!! ATTCCTTTTTAGTAGTTTTA+AGG - chr7_1:73035087-73035106 Msa1036610:intron 20.0%
!! TAACCTTAAAACTACTAAAA+AGG + chr7_1:73035093-73035112 None:intergenic 20.0%
!! ATCAAAAGTAACAAAGTTTA+TGG + chr7_1:73035136-73035155 None:intergenic 20.0%
!!! AAATAGTTAAAGGGTATTAT+TGG + chr7_1:73035175-73035194 None:intergenic 20.0%
!! TACAAAAGTGATCATTAAAA+AGG - chr7_1:73035316-73035335 Msa1036610:intron 20.0%
!!! TTTGTTGTTTTTCTTAAGTT+TGG - chr7_1:73036601-73036620 Msa1036610:five_prime_UTR 20.0%
!!! TTGTTGTTTTTCTTAAGTTT+GGG - chr7_1:73036602-73036621 Msa1036610:five_prime_UTR 20.0%
!! AATCACATCACAATATATAA+TGG + chr7_1:73036811-73036830 None:intergenic 20.0%
! TGACTTATGAGTATACTTTA+TGG + chr7_1:73029368-73029387 None:intergenic 25.0%
!!! TAGAATGCATTTTTTTACTG+TGG + chr7_1:73029562-73029581 None:intergenic 25.0%
! TGCATTCTAATCTTATGTTT+AGG - chr7_1:73029573-73029592 Msa1036610:three_prime_UTR 25.0%
!! AATGTAACTTTAGAAGGAAA+GGG + chr7_1:73029753-73029772 None:intergenic 25.0%
!! AAATGTAACTTTAGAAGGAA+AGG + chr7_1:73029754-73029773 None:intergenic 25.0%
! AGGAAAAATGTAACTTTAGA+AGG + chr7_1:73029759-73029778 None:intergenic 25.0%
! TTCTTCTTCTATATTGTAGT+TGG + chr7_1:73029883-73029902 None:intergenic 25.0%
!! TGACATATCAAAGTGTTTAA+GGG + chr7_1:73030084-73030103 None:intergenic 25.0%
!! ATGACATATCAAAGTGTTTA+AGG + chr7_1:73030085-73030104 None:intergenic 25.0%
!! TACTTTGTTCTTGATTTTGA+AGG + chr7_1:73030136-73030155 None:intergenic 25.0%
!! TTCTGTTTAATTTACCGATT+AGG - chr7_1:73030240-73030259 Msa1036610:intron 25.0%
!! TCTGTTTAATTTACCGATTA+GGG - chr7_1:73030241-73030260 Msa1036610:intron 25.0%
! GTTGTAGTAATAACATACAT+TGG + chr7_1:73030672-73030691 None:intergenic 25.0%
!!! TGAATCTTTTATTTGGATGT+TGG - chr7_1:73030725-73030744 Msa1036610:intron 25.0%
!!! ATGAGTTGAAGTTGTATTTT+TGG - chr7_1:73030766-73030785 Msa1036610:intron 25.0%
! TACCAAACTCCAAATTAATA+GGG + chr7_1:73030810-73030829 None:intergenic 25.0%
! ATACCAAACTCCAAATTAAT+AGG + chr7_1:73030811-73030830 None:intergenic 25.0%
!! TCAATCATCTTTTAGTGTAA+AGG - chr7_1:73031066-73031085 Msa1036610:intron 25.0%
! TCAATCATCTTTAAGTGTAA+AGG - chr7_1:73031219-73031238 Msa1036610:intron 25.0%
! TCATATAATGCATATCCATT+AGG - chr7_1:73031576-73031595 Msa1036610:CDS 25.0%
! CATATAATGCATATCCATTA+GGG - chr7_1:73031577-73031596 Msa1036610:CDS 25.0%
! AATAATCAAGTTACAAGTTC+TGG - chr7_1:73031737-73031756 Msa1036610:CDS 25.0%
!!! TTGTTATTTAATATTGTCCC+CGG - chr7_1:73031783-73031802 Msa1036610:CDS 25.0%
! ACTGAAAATCAAACAAAAAG+GGG + chr7_1:73031895-73031914 None:intergenic 25.0%
!!! GCTTACTGATTTATTAGAAT+TGG - chr7_1:73031960-73031979 Msa1036610:CDS 25.0%
!! ACTAGGAAATTGTTTTCTAT+CGG + chr7_1:73032429-73032448 None:intergenic 25.0%
!!! CTAGCTGTTGATTTAAATAT+TGG - chr7_1:73032770-73032789 Msa1036610:intron 25.0%
! ATTTACTAAACTAGAACTGA+TGG - chr7_1:73032960-73032979 Msa1036610:intron 25.0%
! TATAAAACAGTTGCCTAAAT+TGG - chr7_1:73033057-73033076 Msa1036610:intron 25.0%
! AAAAACTAATTAGCTACTTC+TGG + chr7_1:73033105-73033124 None:intergenic 25.0%
! TTAGAGAAAGAGAAACAAAT+AGG + chr7_1:73033142-73033161 None:intergenic 25.0%
! CTTTGGTTAGAAAATTCATT+AGG - chr7_1:73033189-73033208 Msa1036610:intron 25.0%
! AAACTACTTTGTATTTGACT+AGG + chr7_1:73033463-73033482 None:intergenic 25.0%
!! TTGTCTTATTAAATGTTAGG+GGG - chr7_1:73033618-73033637 Msa1036610:intron 25.0%
!!! TGCCATAATTATTTTTAACC+AGG - chr7_1:73033711-73033730 Msa1036610:CDS 25.0%
! AATGTCTGATATGATTAATG+TGG - chr7_1:73033976-73033995 Msa1036610:intron 25.0%
!!! AAGGGAGTAAATATTTTGAT+TGG - chr7_1:73034242-73034261 Msa1036610:intron 25.0%
!!! GAGTAAATATTTTGATTGGT+TGG - chr7_1:73034246-73034265 Msa1036610:intron 25.0%
!! GACTACATTTTATATCAAGT+TGG - chr7_1:73034997-73035016 Msa1036610:intron 25.0%
! TGGGATGATAAATAGTTAAA+GGG + chr7_1:73035184-73035203 None:intergenic 25.0%
!!! AATGCAACATAACTGTTTTT+TGG + chr7_1:73035257-73035276 None:intergenic 25.0%
! AAGTGATCATTAAAAAGGAA+CGG - chr7_1:73035321-73035340 Msa1036610:intron 25.0%
! CAGTAGTGTTAATTAAAGAA+GGG + chr7_1:73035523-73035542 None:intergenic 25.0%
! GAAAGTTCATTCAATATTAG+TGG - chr7_1:73035637-73035656 Msa1036610:CDS 25.0%
! ATCAAATTGAAATATTCCAC+AGG + chr7_1:73035714-73035733 None:intergenic 25.0%
! AAATAAACAGTGCAGTAAAA+AGG + chr7_1:73036073-73036092 None:intergenic 25.0%
! TGACAACTGTTATTAAACTA+AGG - chr7_1:73036104-73036123 Msa1036610:five_prime_UTR 25.0%
! GACAACTGTTATTAAACTAA+GGG - chr7_1:73036105-73036124 Msa1036610:five_prime_UTR 25.0%
! ACAAATAAACTCACAATGAT+TGG + chr7_1:73036182-73036201 None:intergenic 25.0%
! TACGTGTTATAGTAAAGAAA+AGG + chr7_1:73036256-73036275 None:intergenic 25.0%
! TTTGATTGTATGTTTGTGTT+TGG - chr7_1:73036644-73036663 Msa1036610:five_prime_UTR 25.0%
!! ATAAATCTGGAACATCAAAA+AGG + chr7_1:73036711-73036730 None:intergenic 25.0%
! TGATCATCAAAAGATAAATC+TGG + chr7_1:73036724-73036743 None:intergenic 25.0%
! AGAGCTTAATAAGAAAAGTA+TGG - chr7_1:73036763-73036782 Msa1036610:five_prime_UTR 25.0%
CTTATGAGTATACTTTATGG+TGG + chr7_1:73029365-73029384 None:intergenic 30.0%
CAAAAAGGAACAATCCAATT+GGG + chr7_1:73029394-73029413 None:intergenic 30.0%
! TTGACTTTGGAGACTAATAA+GGG + chr7_1:73029502-73029521 None:intergenic 30.0%
! ATTGACTTTGGAGACTAATA+AGG + chr7_1:73029503-73029522 None:intergenic 30.0%
! ACCTCTTTCTTAAACTCTTT+TGG + chr7_1:73029702-73029721 None:intergenic 30.0%
TGGAACTTGAAAAAAGGTTA+TGG + chr7_1:73029863-73029882 None:intergenic 30.0%
TGTAGTTGGAACTTGAAAAA+AGG + chr7_1:73029869-73029888 None:intergenic 30.0%
AAAGAGTGACAAAATGTCAA+TGG + chr7_1:73029926-73029945 None:intergenic 30.0%
! TCTCTTTTTCTCTGTGAAAA+GGG - chr7_1:73029994-73030013 Msa1036610:intron 30.0%
!!! TTGCTTTTCAAGTGTAATAG+AGG - chr7_1:73030211-73030230 Msa1036610:intron 30.0%
!!! TGCTTTTCAAGTGTAATAGA+GGG - chr7_1:73030212-73030231 Msa1036610:intron 30.0%
TTCAAACTTTACTCCCTAAT+CGG + chr7_1:73030257-73030276 None:intergenic 30.0%
!! GTAAAGTTTGAAGCTTTTGT+TGG - chr7_1:73030265-73030284 Msa1036610:intron 30.0%
!! TTTGATTGCTTTTGTGTGAT+TGG - chr7_1:73030447-73030466 Msa1036610:intron 30.0%
!!! TCTTTTTTGGAGGACTAATT+TGG - chr7_1:73030488-73030507 Msa1036610:intron 30.0%
! AGTGGAATTATGCAATCTTT+TGG - chr7_1:73030628-73030647 Msa1036610:CDS 30.0%
AAACTCCAAATTAATAGGGA+GGG + chr7_1:73030806-73030825 None:intergenic 30.0%
ATACAACCAATTAAGCTAAC+CGG + chr7_1:73030994-73031013 None:intergenic 30.0%
AAAGACAAGGAAGAACATAA+AGG + chr7_1:73031104-73031123 None:intergenic 30.0%
!!! TCTTTTTTTCCTTCCATGTT+TGG - chr7_1:73031119-73031138 Msa1036610:intron 30.0%
AAAGACAAGGAAGAACATAA+AGG + chr7_1:73031104-73031123 None:intergenic 30.0%
!!! TCTTTTTTTCCTTCCATGTT+TGG - chr7_1:73031119-73031138 Msa1036610:intron 30.0%
GGCAAATGTTAGTAAATTAG+TGG - chr7_1:73031326-73031345 Msa1036610:CDS 30.0%
!! TACCTTAAATTTTCGAGATG+TGG - chr7_1:73031387-73031406 Msa1036610:CDS 30.0%
TACCACATCTCGAAAATTTA+AGG + chr7_1:73031392-73031411 None:intergenic 30.0%
! AAATTTTCACATGACGCTTT+GGG - chr7_1:73031534-73031553 Msa1036610:CDS 30.0%
TACTGTAAACAAAGGATCTT+AGG + chr7_1:73031667-73031686 None:intergenic 30.0%
! TCCTTTGTTTACAGTATTGT+TGG - chr7_1:73031671-73031690 Msa1036610:CDS 30.0%
! CCTTTGTTTACAGTATTGTT+GGG - chr7_1:73031672-73031691 Msa1036610:CDS 30.0%
! ATTTTCAAATTTTCTACGGC+CGG + chr7_1:73031805-73031824 None:intergenic 30.0%
TGAAAATCAAACAAAAAGGG+GGG + chr7_1:73031893-73031912 None:intergenic 30.0%
CTGAAAATCAAACAAAAAGG+GGG + chr7_1:73031894-73031913 None:intergenic 30.0%
!!! TTTGATTTTCAGTTTGCTGA+TGG - chr7_1:73031902-73031921 Msa1036610:CDS 30.0%
!!! TTGATTTTCAGTTTGCTGAT+GGG - chr7_1:73031903-73031922 Msa1036610:CDS 30.0%
! TCAATTTTCTGCTGGAATTA+GGG - chr7_1:73031934-73031953 Msa1036610:CDS 30.0%
TACATCATGTTGTCAAAAAG+CGG - chr7_1:73032121-73032140 Msa1036610:CDS 30.0%
AATGGACAGTTTAATGTTGA+TGG - chr7_1:73032224-73032243 Msa1036610:CDS 30.0%
AGCATCATGAAGAGATATTA+TGG + chr7_1:73032621-73032640 None:intergenic 30.0%
AGTTCTCAAATGACATAACT+AGG + chr7_1:73032892-73032911 None:intergenic 30.0%
ATGACTCTTTCTACCAATTT+AGG + chr7_1:73033073-73033092 None:intergenic 30.0%
! AAGCTGTTCTATGATTTTGA+TGG - chr7_1:73033263-73033282 Msa1036610:intron 30.0%
! ATGGATTGTAAGATATTTGC+AGG - chr7_1:73033282-73033301 Msa1036610:intron 30.0%
TTGCAGGATATAAACTTATG+AGG - chr7_1:73033298-73033317 Msa1036610:intron 30.0%
TTTGTATTTGACTAGGAATG+TGG + chr7_1:73033456-73033475 None:intergenic 30.0%
AACTGTAGAATTATTACTGC+AGG + chr7_1:73033535-73033554 None:intergenic 30.0%
TTATTAAATGTTAGGGGGTA+AGG - chr7_1:73033623-73033642 Msa1036610:intron 30.0%
TATTAAATGTTAGGGGGTAA+GGG - chr7_1:73033624-73033643 Msa1036610:intron 30.0%
GATTGTTGAGCATTATCATA+AGG - chr7_1:73033733-73033752 Msa1036610:intron 30.0%
!!! TTACACTTCTTTTTTTCAGC+CGG - chr7_1:73033757-73033776 Msa1036610:intron 30.0%
CTTGAAGGAAAAATCATCTT+CGG - chr7_1:73033784-73033803 Msa1036610:intron 30.0%
ATAATATGGTCAAGCATGAA+GGG - chr7_1:73033912-73033931 Msa1036610:intron 30.0%
TGGCTGCAAAAATATGATAT+TGG - chr7_1:73034060-73034079 Msa1036610:intron 30.0%
CTATGATTCAATACACCAAT+CGG - chr7_1:73034141-73034160 Msa1036610:intron 30.0%
TAGATGATGAACTCAAACAA+TGG + chr7_1:73034531-73034550 None:intergenic 30.0%
ATCTAAAAACAGCAAGAAGA+GGG - chr7_1:73034612-73034631 Msa1036610:intron 30.0%
ATCACTCAAAATGCAAAAAC+GGG + chr7_1:73034760-73034779 None:intergenic 30.0%
CATCACTCAAAATGCAAAAA+CGG + chr7_1:73034761-73034780 None:intergenic 30.0%
! ACTTGCTGATACTAAATCAA+AGG - chr7_1:73034914-73034933 Msa1036610:intron 30.0%
CTGATACTAAATCAAAGGTA+AGG - chr7_1:73034919-73034938 Msa1036610:intron 30.0%
AAATCAAAGGTAAGGTTTAG+AGG - chr7_1:73034927-73034946 Msa1036610:intron 30.0%
AATCAAAGGTAAGGTTTAGA+GGG - chr7_1:73034928-73034947 Msa1036610:intron 30.0%
GATTTGAGAAATATATCCTC+TGG - chr7_1:73034950-73034969 Msa1036610:intron 30.0%
AACTACTAAAAAGGAATGGA+TGG + chr7_1:73035084-73035103 None:intergenic 30.0%
GTGGGATGATAAATAGTTAA+AGG + chr7_1:73035185-73035204 None:intergenic 30.0%
TTTCCTAAACATGTACCTTT+AGG - chr7_1:73035398-73035417 Msa1036610:intron 30.0%
! TATCCTAAAGGTACATGTTT+AGG + chr7_1:73035404-73035423 None:intergenic 30.0%
CAACTTGAAATGTATCCTAA+AGG + chr7_1:73035416-73035435 None:intergenic 30.0%
GCAGTAGTGTTAATTAAAGA+AGG + chr7_1:73035524-73035543 None:intergenic 30.0%
! AATTTTGCAGTTGCATCAAA+TGG - chr7_1:73035544-73035563 Msa1036610:intron 30.0%
!! CTTCTGCTATTTCAAGAAAA+TGG + chr7_1:73035873-73035892 None:intergenic 30.0%
TGATGAACAAATTGTGTATC+AGG - chr7_1:73036377-73036396 Msa1036610:five_prime_UTR 30.0%
GATGAACAAATTGTGTATCA+GGG - chr7_1:73036378-73036397 Msa1036610:five_prime_UTR 30.0%
CAACAAAAATGTACACAGAT+TGG - chr7_1:73036407-73036426 Msa1036610:five_prime_UTR 30.0%
! TGTTTTTCTTAAGTTTGGGT+TGG - chr7_1:73036606-73036625 Msa1036610:five_prime_UTR 30.0%
! CTTTTCTTATTAAGCTCTCA+AGG + chr7_1:73036761-73036780 None:intergenic 30.0%
CTCATAAGTCATAACCCAAT+TGG - chr7_1:73029377-73029396 Msa1036610:three_prime_UTR 35.0%
CCAAAAAGGAACAATCCAAT+TGG + chr7_1:73029395-73029414 None:intergenic 35.0%
! CCAATTGGATTGTTCCTTTT+TGG - chr7_1:73029392-73029411 Msa1036610:three_prime_UTR 35.0%
CCATTAGGACAAATCCAAAA+AGG + chr7_1:73029409-73029428 None:intergenic 35.0%
! CCTTTTTGGATTTGTCCTAA+TGG - chr7_1:73029406-73029425 Msa1036610:three_prime_UTR 35.0%
! TTTTGGATTTGTCCTAATGG+TGG - chr7_1:73029409-73029428 Msa1036610:three_prime_UTR 35.0%
TAACATTAGCATCCACCATT+AGG + chr7_1:73029424-73029443 None:intergenic 35.0%
ATAAGGGAAAAAGTCCCAAA+AGG + chr7_1:73029486-73029505 None:intergenic 35.0%
GCCAAAAGAGTTTAAGAAAG+AGG - chr7_1:73029698-73029717 Msa1036610:three_prime_UTR 35.0%
TTGTCTCGAATGTTGTTAGA+GGG + chr7_1:73029784-73029803 None:intergenic 35.0%
!! CATTCGAGAGTACTTTAGAT+CGG - chr7_1:73029804-73029823 Msa1036610:CDS 35.0%
TTGCTGAGAAGAAAGTGAAT+AGG + chr7_1:73029950-73029969 None:intergenic 35.0%
! CTCTCTTTTTCTCTGTGAAA+AGG - chr7_1:73029993-73030012 Msa1036610:intron 35.0%
TTCAAGTGTAATAGAGGGTT+TGG - chr7_1:73030217-73030236 Msa1036610:intron 35.0%
!! AAGTTTGAAGCTTTTGTTGG+TGG - chr7_1:73030268-73030287 Msa1036610:intron 35.0%
!! AGTTTGAAGCTTTTGTTGGT+GGG - chr7_1:73030269-73030288 Msa1036610:CDS 35.0%
! AATTTTGTGGTGTGAGTGAT+GGG - chr7_1:73030300-73030319 Msa1036610:CDS 35.0%
! GCTTTTGTGTGATTGGAATT+TGG - chr7_1:73030454-73030473 Msa1036610:intron 35.0%
TTTGTGTGATTGGAATTTGG+AGG - chr7_1:73030457-73030476 Msa1036610:intron 35.0%
TTGTGTGATTGGAATTTGGA+GGG - chr7_1:73030458-73030477 Msa1036610:intron 35.0%
! GGAGGGTTTTTCTTCTTTTT+TGG - chr7_1:73030475-73030494 Msa1036610:intron 35.0%
!!! GGGTTTTTCTTCTTTTTTGG+AGG - chr7_1:73030478-73030497 Msa1036610:intron 35.0%
TTATAAGGGGAAGAAGAAGA+TGG - chr7_1:73030560-73030579 Msa1036610:CDS 35.0%
! GTCTTTGTTTCAATACTCAG+TGG - chr7_1:73030610-73030629 Msa1036610:CDS 35.0%
GCACACAAAAAAAGGAGTAA+AGG + chr7_1:73030694-73030713 None:intergenic 35.0%
CATGTGATGCACACAAAAAA+AGG + chr7_1:73030702-73030721 None:intergenic 35.0%
AATTAATAGGGAGGGATTGA+GGG + chr7_1:73030798-73030817 None:intergenic 35.0%
AAATTAATAGGGAGGGATTG+AGG + chr7_1:73030799-73030818 None:intergenic 35.0%
TCAATCCCTCCCTATTAATT+TGG - chr7_1:73030798-73030817 Msa1036610:intron 35.0%
CAAACTCCAAATTAATAGGG+AGG + chr7_1:73030807-73030826 None:intergenic 35.0%
! CTCCCTATTAATTTGGAGTT+TGG - chr7_1:73030805-73030824 Msa1036610:intron 35.0%
TACCAAAGATTATTCCAGCA+AGG - chr7_1:73030840-73030859 Msa1036610:intron 35.0%
ATCCTTGCTGGAATAATCTT+TGG + chr7_1:73030845-73030864 None:intergenic 35.0%
! TTTTGCATGATTGTATCCCT+TGG - chr7_1:73030937-73030956 Msa1036610:intron 35.0%
CGATTCAAATTTCAGACCAA+GGG + chr7_1:73030956-73030975 None:intergenic 35.0%
! CCTTGGTCTGAAATTTGAAT+CGG - chr7_1:73030954-73030973 Msa1036610:intron 35.0%
CATGGAAGGAAAAAAAGACA+AGG + chr7_1:73031117-73031136 None:intergenic 35.0%
!! TTCCATGCCTGTCTTTATTT+TGG - chr7_1:73031147-73031166 Msa1036610:intron 35.0%
ATCCAAAATAAAGACAGGCA+TGG + chr7_1:73031152-73031171 None:intergenic 35.0%
!!! TGCCTGTCTTTATTTTGGAT+AGG - chr7_1:73031152-73031171 Msa1036610:intron 35.0%
TGCCTATCCAAAATAAAGAC+AGG + chr7_1:73031157-73031176 None:intergenic 35.0%
CATGGAAGGAAAAAAAGACA+AGG + chr7_1:73031117-73031136 None:intergenic 35.0%
!! TTCCATGCCTGTCTTTATTT+TGG - chr7_1:73031147-73031166 Msa1036610:intron 35.0%
ATCCAAAATAAAGACAGGCA+TGG + chr7_1:73031152-73031171 None:intergenic 35.0%
!!! TGCCTGTCTTTATTTTGGAT+AGG - chr7_1:73031152-73031171 Msa1036610:intron 35.0%
TGCCTATCCAAAATAAAGAC+AGG + chr7_1:73031157-73031176 None:intergenic 35.0%
! TTTTTGCAGGATCTTGACAT+TGG - chr7_1:73031425-73031444 Msa1036610:intron 35.0%
AAGACCTTAGAACAGATTGA+GGG - chr7_1:73031507-73031526 Msa1036610:intron 35.0%
! GAAATTTTCACATGACGCTT+TGG - chr7_1:73031533-73031552 Msa1036610:CDS 35.0%
! AATTTTCACATGACGCTTTG+GGG - chr7_1:73031535-73031554 Msa1036610:CDS 35.0%
CCCAACAATACTGTAAACAA+AGG + chr7_1:73031675-73031694 None:intergenic 35.0%
! TTTTCAAATTTTCTACGGCC+GGG + chr7_1:73031804-73031823 None:intergenic 35.0%
! CTCAATTTTCTGCTGGAATT+AGG - chr7_1:73031933-73031952 Msa1036610:CDS 35.0%
GTATTACTATCGGTATTGTG+AGG + chr7_1:73032025-73032044 None:intergenic 35.0%
ACACTGCTTGGTATTACTAT+CGG + chr7_1:73032035-73032054 None:intergenic 35.0%
! TTGGAAAAGTATGGTTCATG+TGG - chr7_1:73032256-73032275 Msa1036610:CDS 35.0%
AGTATGGTTCATGTGGTAAT+AGG - chr7_1:73032263-73032282 Msa1036610:CDS 35.0%
GTGAAAAAAGAACAATGAGC+CGG + chr7_1:73032325-73032344 None:intergenic 35.0%
! TTTTCTATCGGCGAATTTCT+AGG + chr7_1:73032417-73032436 None:intergenic 35.0%
AAAGTATAGTGATGCAGACT+AGG + chr7_1:73032446-73032465 None:intergenic 35.0%
CACAACAACAATTGTCTACA+AGG + chr7_1:73032509-73032528 None:intergenic 35.0%
AGCAAGTCATGAAATCTGAA+TGG + chr7_1:73032718-73032737 None:intergenic 35.0%
CTCAAATGACATAACTAGGA+GGG + chr7_1:73032888-73032907 None:intergenic 35.0%
TCTCAAATGACATAACTAGG+AGG + chr7_1:73032889-73032908 None:intergenic 35.0%
GAGTTCAATATGCAAGTCTT+TGG - chr7_1:73033172-73033191 Msa1036610:intron 35.0%
GATTTGTGTAACAATTCGCA+TGG - chr7_1:73033646-73033665 Msa1036610:intron 35.0%
! ATGATAATGCTCAACAATCC+TGG + chr7_1:73033732-73033751 None:intergenic 35.0%
! GATTTTTCCTTCAAGACATC+CGG + chr7_1:73033779-73033798 None:intergenic 35.0%
ACACAACTCATTCTGCTTAT+TGG - chr7_1:73033879-73033898 Msa1036610:intron 35.0%
CACAACTCATTCTGCTTATT+GGG - chr7_1:73033880-73033899 Msa1036610:intron 35.0%
TCATTCTGCTTATTGGGAAA+TGG - chr7_1:73033886-73033905 Msa1036610:intron 35.0%
CATTCTGCTTATTGGGAAAT+GGG - chr7_1:73033887-73033906 Msa1036610:intron 35.0%
TTGGGAAATGGGTGATAATA+TGG - chr7_1:73033898-73033917 Msa1036610:intron 35.0%
GATAATATGGTCAAGCATGA+AGG - chr7_1:73033911-73033930 Msa1036610:intron 35.0%
TAATATGGTCAAGCATGAAG+GGG - chr7_1:73033913-73033932 Msa1036610:intron 35.0%
! GACATTGACTGAAGCAAAAT+GGG + chr7_1:73033962-73033981 None:intergenic 35.0%
! AGACATTGACTGAAGCAAAA+TGG + chr7_1:73033963-73033982 None:intergenic 35.0%
! TATGATTAATGTGGAGCATC+AGG - chr7_1:73033985-73034004 Msa1036610:intron 35.0%
TTCAATACACCAATCGGAAA+AGG - chr7_1:73034147-73034166 Msa1036610:intron 35.0%
! TTGGACCATCTTCTTTGAAA+GGG - chr7_1:73034224-73034243 Msa1036610:intron 35.0%
TTACTCCCTTTCAAAGAAGA+TGG + chr7_1:73034232-73034251 None:intergenic 35.0%
!!! ATATTTTGATTGGTTGGCTC+AGG - chr7_1:73034252-73034271 Msa1036610:intron 35.0%
TGACTAGTGTTAAACACATC+CGG + chr7_1:73034307-73034326 None:intergenic 35.0%
ATTACTACTGTGACAGATGT+TGG + chr7_1:73034377-73034396 None:intergenic 35.0%
! CACATCTTGAATAGAAGCAT+CGG + chr7_1:73034467-73034486 None:intergenic 35.0%
AATTGTTCACTACAAGCACT+AGG + chr7_1:73034574-73034593 None:intergenic 35.0%
!!! CTCTTCTTGCTGTTTTTAGA+TGG + chr7_1:73034613-73034632 None:intergenic 35.0%
CATCTAAAAACAGCAAGAAG+AGG - chr7_1:73034611-73034630 Msa1036610:intron 35.0%
ACTGATCCAAGATCGAATTA+AGG - chr7_1:73034678-73034697 Msa1036610:CDS 35.0%
TAAGCTCCTTAATTCGATCT+TGG + chr7_1:73034687-73034706 None:intergenic 35.0%
AATTAAGGAGCTTAGAGAGT+TGG - chr7_1:73034693-73034712 Msa1036610:CDS 35.0%
AAAGTTACCTTAGCTCCATT+CGG + chr7_1:73034721-73034740 None:intergenic 35.0%
!! CGTTTTTGCATTTTGAGTGA+TGG - chr7_1:73034759-73034778 Msa1036610:CDS 35.0%
!! GTGTAGTATTGATTCACTAC+TGG - chr7_1:73034827-73034846 Msa1036610:intron 35.0%
ATTTACAGATTATGGACCAG+AGG + chr7_1:73034969-73034988 None:intergenic 35.0%
TGATCATTAAAAAGGAACGG+AGG - chr7_1:73035324-73035343 Msa1036610:intron 35.0%
GATCATTAAAAAGGAACGGA+GGG - chr7_1:73035325-73035344 Msa1036610:intron 35.0%
CTGTTTCCAGTATTAAACCA+GGG + chr7_1:73035367-73035386 None:intergenic 35.0%
ACTGTTTCCAGTATTAAACC+AGG + chr7_1:73035368-73035387 None:intergenic 35.0%
TGGTTTAATACTGGAAACAG+TGG - chr7_1:73035367-73035386 Msa1036610:intron 35.0%
CAAATGGAAACAGACATTCT+TGG - chr7_1:73035560-73035579 Msa1036610:intron 35.0%
ATGTATGCAATACCTCAACA+GGG + chr7_1:73035800-73035819 None:intergenic 35.0%
AATGTATGCAATACCTCAAC+AGG + chr7_1:73035801-73035820 None:intergenic 35.0%
! TTGGGGCTTACAATTTTGAA+GGG - chr7_1:73035904-73035923 Msa1036610:five_prime_UTR 35.0%
ATCGATATGCTTTATCGTTG+AGG - chr7_1:73035954-73035973 Msa1036610:five_prime_UTR 35.0%
GATTGTAGTATCTGAACAAG+TGG + chr7_1:73036444-73036463 None:intergenic 35.0%
! AACAGTAACTGTTTGATTCG+TGG - chr7_1:73036481-73036500 Msa1036610:five_prime_UTR 35.0%
! TTTGATTCGTGGAAACTTCA+CGG - chr7_1:73036492-73036511 Msa1036610:five_prime_UTR 35.0%
! AATCTGGAACATCAAAAAGG+TGG + chr7_1:73036708-73036727 None:intergenic 35.0%
! ATCCTCCATGAAGTTCCTTT+TGG - chr7_1:73029468-73029487 Msa1036610:three_prime_UTR 40.0%
! TCCTCCATGAAGTTCCTTTT+GGG - chr7_1:73029469-73029488 Msa1036610:three_prime_UTR 40.0%
AAGTCCCAAAAGGAACTTCA+TGG + chr7_1:73029476-73029495 None:intergenic 40.0%
TCGAATGTTGTTAGAGGGAA+AGG + chr7_1:73029779-73029798 None:intergenic 40.0%
GTTGTCTCGAATGTTGTTAG+AGG + chr7_1:73029785-73029804 None:intergenic 40.0%
GAGAATGAGCTTGTAGTAGT+TGG + chr7_1:73029976-73029995 None:intergenic 40.0%
!! GTTTGAAGCTTTTGTTGGTG+GGG - chr7_1:73030270-73030289 Msa1036610:CDS 40.0%
! GAATTTTGTGGTGTGAGTGA+TGG - chr7_1:73030299-73030318 Msa1036610:CDS 40.0%
GAAGAGAACCGCCATTAAAA+CGG - chr7_1:73030352-73030371 Msa1036610:CDS 40.0%
ACAGAGGAAGTTAGCTAGTT+AGG - chr7_1:73030415-73030434 Msa1036610:intron 40.0%
CAGAGGAAGTTAGCTAGTTA+GGG - chr7_1:73030416-73030435 Msa1036610:intron 40.0%
AAAGACACCCTCAAGCAAAA+GGG + chr7_1:73030517-73030536 None:intergenic 40.0%
TGGTTAATGAGCTTCAGCTA+AGG + chr7_1:73030884-73030903 None:intergenic 40.0%
ACCATTTGAGTCCAACCAAT+TGG - chr7_1:73030900-73030919 Msa1036610:intron 40.0%
ACTACAACTTCACAGCCAAT+TGG + chr7_1:73030918-73030937 None:intergenic 40.0%
CCGATTCAAATTTCAGACCA+AGG + chr7_1:73030957-73030976 None:intergenic 40.0%
ATCGGTCTTCTAAACATGTC+CGG - chr7_1:73030972-73030991 Msa1036610:intron 40.0%
!! ACATGTCCGGTTAGCTTAAT+TGG - chr7_1:73030985-73031004 Msa1036610:intron 40.0%
GGAAAATCACCAAACATGGA+AGG + chr7_1:73031131-73031150 None:intergenic 40.0%
GCATGGAAAATCACCAAACA+TGG + chr7_1:73031135-73031154 None:intergenic 40.0%
GGAAAATCACCAAACATGGA+AGG + chr7_1:73031131-73031150 None:intergenic 40.0%
GCATGGAAAATCACCAAACA+TGG + chr7_1:73031135-73031154 None:intergenic 40.0%
GAAGACCTTAGAACAGATTG+AGG - chr7_1:73031506-73031525 Msa1036610:intron 40.0%
AATGCATATCCATTAGGGCA+AGG - chr7_1:73031582-73031601 Msa1036610:CDS 40.0%
ATGCATATCCATTAGGGCAA+GGG - chr7_1:73031583-73031602 Msa1036610:CDS 40.0%
TAATCATACCCTTGCCCTAA+TGG + chr7_1:73031594-73031613 None:intergenic 40.0%
AACAAAGGATCTTAGGACGA+GGG + chr7_1:73031660-73031679 None:intergenic 40.0%
AAACAAAGGATCTTAGGACG+AGG + chr7_1:73031661-73031680 None:intergenic 40.0%
TGTTTACAGTATTGTTGGGC+AGG - chr7_1:73031676-73031695 Msa1036610:CDS 40.0%
!!! AAGTTCTGGCTTGTCTTTTG+AGG - chr7_1:73031751-73031770 Msa1036610:CDS 40.0%
! TTTCAAATTTTCTACGGCCG+GGG + chr7_1:73031803-73031822 None:intergenic 40.0%
!!! ATTTTCAGTTTGCTGATGGG+TGG - chr7_1:73031906-73031925 Msa1036610:CDS 40.0%
! TGGCAATCTCAATTTTCTGC+TGG - chr7_1:73031926-73031945 Msa1036610:CDS 40.0%
TTACTATCGGTATTGTGAGG+TGG + chr7_1:73032022-73032041 None:intergenic 40.0%
! TACCAAGCAGTGTTGTTAAC+TGG - chr7_1:73032042-73032061 Msa1036610:CDS 40.0%
TACCAGTTAACAACACTGCT+TGG + chr7_1:73032047-73032066 None:intergenic 40.0%
ATATTATGGCGCTCAAGCAA+AGG + chr7_1:73032607-73032626 None:intergenic 40.0%
AACCTGACGTGATGTTAGTA+TGG - chr7_1:73033009-73033028 Msa1036610:intron 40.0%
CTGCAGGTGAATGAAGATAT+GGG - chr7_1:73033376-73033395 Msa1036610:intron 40.0%
TGCAGGTGAATGAAGATATG+GGG - chr7_1:73033377-73033396 Msa1036610:intron 40.0%
TTTGAAGAGCTCTTCATCTC+AGG - chr7_1:73033480-73033499 Msa1036610:intron 40.0%
ATTATTACTGCAGGCAATCC+AGG + chr7_1:73033526-73033545 None:intergenic 40.0%
!! CTCGACCATTGATTTGAGAT+TGG - chr7_1:73033571-73033590 Msa1036610:intron 40.0%
GTCGTCCAATCTCAAATCAA+TGG + chr7_1:73033579-73033598 None:intergenic 40.0%
TGTTAGTGAACACGTGACAA+TGG + chr7_1:73033672-73033691 None:intergenic 40.0%
TTGTCACGTGTTCACTAACA+TGG - chr7_1:73033672-73033691 Msa1036610:CDS 40.0%
GTGCATGAGGAATAAAACAG+TGG - chr7_1:73033820-73033839 Msa1036610:intron 40.0%
ACTCACATCACTATAGAGCT+CGG + chr7_1:73033939-73033958 None:intergenic 40.0%
! AATGTGGAGCATCAGGAATT+TGG - chr7_1:73033992-73034011 Msa1036610:intron 40.0%
AGATAAGACCTGTAAATGCG+AGG - chr7_1:73034017-73034036 Msa1036610:intron 40.0%
GATAAGACCTGTAAATGCGA+GGG - chr7_1:73034018-73034037 Msa1036610:intron 40.0%
AAACTTCAACGGTGTATAGG+AGG + chr7_1:73034176-73034195 None:intergenic 40.0%
TGGAAACTTCAACGGTGTAT+AGG + chr7_1:73034179-73034198 None:intergenic 40.0%
! TGTGAACTACTTGAAGCACT+TGG - chr7_1:73034205-73034224 Msa1036610:intron 40.0%
CTTGGACCATCTTCTTTGAA+AGG - chr7_1:73034223-73034242 Msa1036610:intron 40.0%
TATGAAAATTGCGGATGTGC+CGG - chr7_1:73034285-73034304 Msa1036610:intron 40.0%
ATGCAATCTGCATTGAGTTC+TGG - chr7_1:73034433-73034452 Msa1036610:intron 40.0%
TTTGAGTGATGGTTGCAGTT+CGG - chr7_1:73034770-73034789 Msa1036610:CDS 40.0%
! GAGACAGAAATAGGTTGAGT+GGG + chr7_1:73035203-73035222 None:intergenic 40.0%
! AGAGACAGAAATAGGTTGAG+TGG + chr7_1:73035204-73035223 None:intergenic 40.0%
TACTGCAGAGAGACAGAAAT+AGG + chr7_1:73035212-73035231 None:intergenic 40.0%
TTCTCACCCTGGTTTAATAC+TGG - chr7_1:73035358-73035377 Msa1036610:intron 40.0%
GTGGAGAATCTTAGCAACAA+CGG - chr7_1:73035656-73035675 Msa1036610:exon 40.0%
TGTATGCAATACCTCAACAG+GGG + chr7_1:73035799-73035818 None:intergenic 40.0%
! CTTGGGGCTTACAATTTTGA+AGG - chr7_1:73035903-73035922 Msa1036610:five_prime_UTR 40.0%
TACCAATTGAAACTGCTCCA+TGG - chr7_1:73036308-73036327 Msa1036610:five_prime_UTR 40.0%
ATCCATGGAGCAGTTTCAAT+TGG + chr7_1:73036313-73036332 None:intergenic 40.0%
TACACAGATTGGACATCTTG+TGG - chr7_1:73036418-73036437 Msa1036610:five_prime_UTR 40.0%
! GAAACTTCACGGCCTTTTAT+TGG - chr7_1:73036503-73036522 Msa1036610:five_prime_UTR 40.0%
! GAGTTCTGGTGACCAATAAA+AGG + chr7_1:73036518-73036537 None:intergenic 40.0%
CAGAGATCAAGAATGAGTTC+TGG + chr7_1:73036532-73036551 None:intergenic 40.0%
CTGAGTCTTGCTCATTACAA+GGG + chr7_1:73036581-73036600 None:intergenic 40.0%
ACTGAGTCTTGCTCATTACA+AGG + chr7_1:73036582-73036601 None:intergenic 40.0%
AAAAAGGTGGCACTAAGAAG+TGG + chr7_1:73036695-73036714 None:intergenic 40.0%
GGAGAATATACTGCAACTTG+CGG - chr7_1:73036784-73036803 Msa1036610:five_prime_UTR 40.0%
GGAACTTCATGGAGGATTAG+AGG + chr7_1:73029465-73029484 None:intergenic 45.0%
TCCCAAAAGGAACTTCATGG+AGG + chr7_1:73029473-73029492 None:intergenic 45.0%
!! CGAGAGTACTTTAGATCGGA+CGG - chr7_1:73029808-73029827 Msa1036610:CDS 45.0%
!! TGTGTGGTGCTACAAACAGT+TGG - chr7_1:73030330-73030349 Msa1036610:CDS 45.0%
! TTTGGAGACCCTTTTGCTTG+AGG - chr7_1:73030506-73030525 Msa1036610:intron 45.0%
! TTGGAGACCCTTTTGCTTGA+GGG - chr7_1:73030507-73030526 Msa1036610:intron 45.0%
CAAAGACACCCTCAAGCAAA+AGG + chr7_1:73030518-73030537 None:intergenic 45.0%
!! TTTGCTTGAGGGTGTCTTTG+AGG - chr7_1:73030518-73030537 Msa1036610:intron 45.0%
ATCATTCGTCGAATCCTTGC+TGG + chr7_1:73030857-73030876 None:intergenic 45.0%
GCCAATTGGTTGGACTCAAA+TGG + chr7_1:73030904-73030923 None:intergenic 45.0%
CAACTTCACAGCCAATTGGT+TGG + chr7_1:73030914-73030933 None:intergenic 45.0%
TTGCAGGATCTTGACATTGG+AGG - chr7_1:73031428-73031447 Msa1036610:intron 45.0%
ACCTTAGAACAGATTGAGGG+TGG - chr7_1:73031510-73031529 Msa1036610:intron 45.0%
CCTTAGAACAGATTGAGGGT+GGG - chr7_1:73031511-73031530 Msa1036610:intron 45.0%
!! CTGTTACTGGAAAGCATCAG+TGG - chr7_1:73031702-73031721 Msa1036610:CDS 45.0%
AAAGGGGGGAAGAATGAGAA+TGG + chr7_1:73031879-73031898 None:intergenic 45.0%
GTGTTGTCAACTGTAGATCG+CGG + chr7_1:73032191-73032210 None:intergenic 45.0%
ACCAAGCCATTACATGACTC+CGG - chr7_1:73032303-73032322 Msa1036610:CDS 45.0%
AATGAGCCGGAGTCATGTAA+TGG + chr7_1:73032312-73032331 None:intergenic 45.0%
CTCCATACTAACATCACGTC+AGG + chr7_1:73033014-73033033 None:intergenic 45.0%
GCTGCAGGTGAATGAAGATA+TGG - chr7_1:73033375-73033394 Msa1036610:intron 45.0%
GCAGGTGAATGAAGATATGG+GGG - chr7_1:73033378-73033397 Msa1036610:intron 45.0%
CAGGTAAGCTTCTTCGTACA+CGG - chr7_1:73033499-73033518 Msa1036610:intron 45.0%
TCACTAACATGGAAAGCGAG+TGG - chr7_1:73033683-73033702 Msa1036610:CDS 45.0%
! TTTTCAGCCGGATGTCTTGA+AGG - chr7_1:73033769-73033788 Msa1036610:intron 45.0%
ATATTATGCCTGCGTGCATG+AGG - chr7_1:73033807-73033826 Msa1036610:intron 45.0%
!! GTTTTATTCCTCATGCACGC+AGG + chr7_1:73033818-73033837 None:intergenic 45.0%
TTCCTCCCAGAACATTGAAG+GGG + chr7_1:73033857-73033876 None:intergenic 45.0%
GTTCCTCCCAGAACATTGAA+GGG + chr7_1:73033858-73033877 None:intergenic 45.0%
TGTTCCTCCCAGAACATTGA+AGG + chr7_1:73033859-73033878 None:intergenic 45.0%
! AGGAGGAATCCTTTTCCGAT+TGG + chr7_1:73034159-73034178 None:intergenic 45.0%
CATCCAGCTGGAAACTTCAA+CGG + chr7_1:73034187-73034206 None:intergenic 45.0%
TCAAGTAGTTCACATCCAGC+TGG + chr7_1:73034199-73034218 None:intergenic 45.0%
TTGTCCTCTCTGACAAGAGA+AGG + chr7_1:73034505-73034524 None:intergenic 45.0%
!! CTTAGAGAGTTGGTACCGAA+TGG - chr7_1:73034703-73034722 Msa1036610:CDS 45.0%
TTGAGTGATGGTTGCAGTTC+GGG - chr7_1:73034771-73034790 Msa1036610:CDS 45.0%
! TTCTGAGCAGGGTTCAAGTT+GGG - chr7_1:73035592-73035611 Msa1036610:CDS 45.0%
CAACGGACAGATGCTTATTG+AGG - chr7_1:73035673-73035692 Msa1036610:five_prime_UTR 45.0%
AAGAAAAACTCCCCCTGTTG+AGG - chr7_1:73035785-73035804 Msa1036610:five_prime_UTR 45.0%
GTATGCAATACCTCAACAGG+GGG + chr7_1:73035798-73035817 None:intergenic 45.0%
AGCAGAAGCTGTAAGAAGCT+TGG - chr7_1:73035885-73035904 Msa1036610:five_prime_UTR 45.0%
GCAGAAGCTGTAAGAAGCTT+GGG - chr7_1:73035886-73035905 Msa1036610:five_prime_UTR 45.0%
CAGAAGCTGTAAGAAGCTTG+GGG - chr7_1:73035887-73035906 Msa1036610:five_prime_UTR 45.0%
AACAACGACCAAGCCTAGAT+CGG + chr7_1:73036032-73036051 None:intergenic 45.0%
CTGTTGATACACAACGCTCT+TGG + chr7_1:73036466-73036485 None:intergenic 45.0%
GTCTTGCTCATTACAAGGGT+AGG + chr7_1:73036577-73036596 None:intergenic 45.0%
!!! TATTTTTATAGTATATAATT+AGG + chr7_1:73032813-73032832 None:intergenic 5.0%
!! TGAAGCTTTTGTTGGTGGGG+TGG - chr7_1:73030273-73030292 Msa1036610:CDS 50.0%
!! TTGTGGTGTGAGTGATGGGT+TGG - chr7_1:73030304-73030323 Msa1036610:CDS 50.0%
!! TGTGGTGTGAGTGATGGGTT+GGG - chr7_1:73030305-73030324 Msa1036610:CDS 50.0%
!! AGTGATGGGTTGGGATTGTG+TGG - chr7_1:73030314-73030333 Msa1036610:CDS 50.0%
!! AACCCAGCTCGCCGTTTTAA+TGG + chr7_1:73030366-73030385 None:intergenic 50.0%
CCCACCCTCAATCTGTTCTA+AGG + chr7_1:73031514-73031533 None:intergenic 50.0%
GGGGGAAGAATGAGAATGGT+AGG + chr7_1:73031875-73031894 None:intergenic 50.0%
GTTGTGTCTGTAGTTCCCCT+AGG - chr7_1:73032523-73032542 Msa1036610:intron 50.0%
!! TTTTTGCCACTTGCTGCTGC+AGG - chr7_1:73033360-73033379 Msa1036610:intron 50.0%
TTGACGCCCCTTCAATGTTC+TGG - chr7_1:73033848-73033867 Msa1036610:intron 50.0%
TGACGCCCCTTCAATGTTCT+GGG - chr7_1:73033849-73033868 Msa1036610:intron 50.0%
! TAAATGCGAGGGAGTGTGGA+GGG - chr7_1:73034029-73034048 Msa1036610:intron 50.0%
ACACCGTTGAAGTTTCCAGC+TGG - chr7_1:73034181-73034200 Msa1036610:intron 50.0%
CCTCTCTGACAAGAGAAGGA+TGG + chr7_1:73034501-73034520 None:intergenic 50.0%
CCATCCTTCTCTTGTCAGAG+AGG - chr7_1:73034498-73034517 Msa1036610:CDS 50.0%
AAAACAGCAAGAAGAGGGCC+AGG - chr7_1:73034617-73034636 Msa1036610:intron 50.0%
CTGGGGAAAGTTGTAGACCT+CGG - chr7_1:73034641-73034660 Msa1036610:CDS 50.0%
TGGATCAGTTGCCTGTCTCT+TGG + chr7_1:73034667-73034686 None:intergenic 50.0%
! GTTGGTACCGAATGGAGCTA+AGG - chr7_1:73034711-73034730 Msa1036610:CDS 50.0%
! GAGTAGCTGATTTCTCACCC+TGG - chr7_1:73035347-73035366 Msa1036610:intron 50.0%
!! TGGATCCTCTAGTTCTGAGC+AGG - chr7_1:73035580-73035599 Msa1036610:CDS 50.0%
!! GGATCCTCTAGTTCTGAGCA+GGG - chr7_1:73035581-73035600 Msa1036610:CDS 50.0%
TGAACCCTGCTCAGAACTAG+AGG + chr7_1:73035588-73035607 None:intergenic 50.0%
! GTTCTGAGCAGGGTTCAAGT+TGG - chr7_1:73035591-73035610 Msa1036610:CDS 50.0%
!! TCAAGTTGGGCAGTTGAGGT+AGG - chr7_1:73035605-73035624 Msa1036610:CDS 50.0%
! CAAGTTGGGCAGTTGAGGTA+GGG - chr7_1:73035606-73035625 Msa1036610:CDS 50.0%
AAGTTGGGCAGTTGAGGTAG+GGG - chr7_1:73035607-73035626 Msa1036610:CDS 50.0%
CAAACCTAGCCAACCGATCT+AGG - chr7_1:73036016-73036035 Msa1036610:five_prime_UTR 50.0%
!! AGCTTTTGTTGGTGGGGTGG+TGG - chr7_1:73030276-73030295 Msa1036610:CDS 55.0%
!! GCTTTTGTTGGTGGGGTGGT+GGG - chr7_1:73030277-73030296 Msa1036610:CDS 55.0%
!!! GTGGGGTGGTGGGAATTTTG+TGG - chr7_1:73030287-73030306 Msa1036610:CDS 55.0%
!! CCAGCTCGCCGTTTTAATGG+CGG + chr7_1:73030363-73030382 None:intergenic 55.0%
CGCCATTAAAACGGCGAGCT+GGG - chr7_1:73030361-73030380 Msa1036610:CDS 55.0%
TAAAACGGCGAGCTGGGTTG+CGG - chr7_1:73030367-73030386 Msa1036610:CDS 55.0%
GGAGGAAGCAAGCTGGAAGA+GGG - chr7_1:73030388-73030407 Msa1036610:intron 55.0%
GCTGGAAGAGGGTCTTACAG+AGG - chr7_1:73030399-73030418 Msa1036610:intron 55.0%
GTTGGGCAGGTAGCTGTTAC+TGG - chr7_1:73031689-73031708 Msa1036610:CDS 55.0%
GCCGGAGTCATGTAATGGCT+TGG + chr7_1:73032307-73032326 None:intergenic 55.0%
CCAAGCTGAACAACGCCTAG+GGG + chr7_1:73032541-73032560 None:intergenic 55.0%
GCCAAGCTGAACAACGCCTA+GGG + chr7_1:73032542-73032561 None:intergenic 55.0%
AGCCAAGCTGAACAACGCCT+AGG + chr7_1:73032543-73032562 None:intergenic 55.0%
CATTCACCTGCAGCAGCAAG+TGG + chr7_1:73033369-73033388 None:intergenic 55.0%
AGCTTCTTCGTACACGGACC+TGG - chr7_1:73033505-73033524 Msa1036610:intron 55.0%
CCACACTCCCTCGCATTTAC+AGG + chr7_1:73034028-73034047 None:intergenic 55.0%
CCTGTAAATGCGAGGGAGTG+TGG - chr7_1:73034025-73034044 Msa1036610:intron 55.0%
! GTAAATGCGAGGGAGTGTGG+AGG - chr7_1:73034028-73034047 Msa1036610:intron 55.0%
! AAATGCGAGGGAGTGTGGAG+GGG - chr7_1:73034030-73034049 Msa1036610:intron 55.0%
TCTACAACTTTCCCCAGGCC+TGG + chr7_1:73034638-73034657 None:intergenic 55.0%
CGAGGTCTACAACTTTCCCC+AGG + chr7_1:73034643-73034662 None:intergenic 55.0%
!! GGGTTCAAGTTGGGCAGTTG+AGG - chr7_1:73035601-73035620 Msa1036610:CDS 55.0%
AGTTGGGCAGTTGAGGTAGG+GGG - chr7_1:73035608-73035627 Msa1036610:CDS 55.0%
GTACGCGTGAGTATGACCTG+TGG - chr7_1:73035695-73035714 Msa1036610:five_prime_UTR 55.0%
! CAAGCCTAGATCGGTTGGCT+AGG + chr7_1:73036023-73036042 None:intergenic 55.0%
CTAGCCAACCGATCTAGGCT+TGG - chr7_1:73036021-73036040 Msa1036610:five_prime_UTR 55.0%
ACGACCAAGCCTAGATCGGT+TGG + chr7_1:73036028-73036047 None:intergenic 55.0%
CCGCCATTAAAACGGCGAGC+TGG - chr7_1:73030360-73030379 Msa1036610:CDS 60.0%
CGGAGGAAGCAAGCTGGAAG+AGG - chr7_1:73030387-73030406 Msa1036610:intron 60.0%
! CCCCTAGGCGTTGTTCAGCT+TGG - chr7_1:73032538-73032557 Msa1036610:intron 60.0%
! CGCCCCTTCAATGTTCTGGG+AGG - chr7_1:73033852-73033871 Msa1036610:intron 60.0%
! AATGCGAGGGAGTGTGGAGG+GGG - chr7_1:73034031-73034050 Msa1036610:intron 60.0%
GTAGACCTCGGCCAAGAGAC+AGG - chr7_1:73034653-73034672 Msa1036610:CDS 60.0%
AGTTGCCTGTCTCTTGGCCG+AGG + chr7_1:73034661-73034680 None:intergenic 60.0%
GGGTTGCGGAGGAAGCAAGC+TGG - chr7_1:73030381-73030400 Msa1036610:intron 65.0%
GAGTGTGGAGGGGGCAGTAG+TGG - chr7_1:73034040-73034059 Msa1036610:intron 65.0%
AGCAAGAAGAGGGCCAGGCC+TGG - chr7_1:73034622-73034641 Msa1036610:intron 65.0%
GCAAGAAGAGGGCCAGGCCT+GGG - chr7_1:73034623-73034642 Msa1036610:intron 65.0%
CAAGAAGAGGGCCAGGCCTG+GGG - chr7_1:73034624-73034643 Msa1036610:intron 65.0%
AACGGCGAGCTGGGTTGCGG+AGG - chr7_1:73030370-73030389 Msa1036610:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 73029358 73036886 73029358 ID=Msa1036610;Name=Msa1036610
chr7_1 mRNA 73029358 73036886 73029358 ID=Msa1036610-mRNA-1;Parent=Msa1036610;Name=Msa1036610-mRNA-1;_AED=0.08;_eAED=0.08;_QI=1221|0.88|1|1|1|1|10|398|625
chr7_1 exon 73029358 73029845 73029358 ID=Msa1036610-mRNA-1:exon:17915;Parent=Msa1036610-mRNA-1
chr7_1 exon 73030269 73030394 73030269 ID=Msa1036610-mRNA-1:exon:17914;Parent=Msa1036610-mRNA-1
chr7_1 exon 73030550 73030690 73030550 ID=Msa1036610-mRNA-1:exon:17913;Parent=Msa1036610-mRNA-1
chr7_1 exon 73031309 73031416 73031309 ID=Msa1036610-mRNA-1:exon:17912;Parent=Msa1036610-mRNA-1
chr7_1 exon 73031512 73032468 73031512 ID=Msa1036610-mRNA-1:exon:17911;Parent=Msa1036610-mRNA-1
chr7_1 exon 73033671 73033730 73033671 ID=Msa1036610-mRNA-1:exon:17910;Parent=Msa1036610-mRNA-1
chr7_1 exon 73034289 73034330 73034289 ID=Msa1036610-mRNA-1:exon:17909;Parent=Msa1036610-mRNA-1
chr7_1 exon 73034472 73034559 73034472 ID=Msa1036610-mRNA-1:exon:17908;Parent=Msa1036610-mRNA-1
chr7_1 exon 73034640 73034810 73034640 ID=Msa1036610-mRNA-1:exon:17907;Parent=Msa1036610-mRNA-1
chr7_1 exon 73035571 73036886 73035571 ID=Msa1036610-mRNA-1:exon:17906;Parent=Msa1036610-mRNA-1
chr7_1 five_prime_UTR 73035666 73036886 73035666 ID=Msa1036610-mRNA-1:five_prime_utr;Parent=Msa1036610-mRNA-1
chr7_1 CDS 73035571 73035665 73035571 ID=Msa1036610-mRNA-1:cds;Parent=Msa1036610-mRNA-1
chr7_1 CDS 73034640 73034810 73034640 ID=Msa1036610-mRNA-1:cds;Parent=Msa1036610-mRNA-1
chr7_1 CDS 73034472 73034559 73034472 ID=Msa1036610-mRNA-1:cds;Parent=Msa1036610-mRNA-1
chr7_1 CDS 73034289 73034330 73034289 ID=Msa1036610-mRNA-1:cds;Parent=Msa1036610-mRNA-1
chr7_1 CDS 73033671 73033730 73033671 ID=Msa1036610-mRNA-1:cds;Parent=Msa1036610-mRNA-1
chr7_1 CDS 73031512 73032468 73031512 ID=Msa1036610-mRNA-1:cds;Parent=Msa1036610-mRNA-1
chr7_1 CDS 73031309 73031416 73031309 ID=Msa1036610-mRNA-1:cds;Parent=Msa1036610-mRNA-1
chr7_1 CDS 73030550 73030690 73030550 ID=Msa1036610-mRNA-1:cds;Parent=Msa1036610-mRNA-1
chr7_1 CDS 73030269 73030394 73030269 ID=Msa1036610-mRNA-1:cds;Parent=Msa1036610-mRNA-1
chr7_1 CDS 73029756 73029845 73029756 ID=Msa1036610-mRNA-1:cds;Parent=Msa1036610-mRNA-1
chr7_1 three_prime_UTR 73029358 73029755 73029358 ID=Msa1036610-mRNA-1:three_prime_utr;Parent=Msa1036610-mRNA-1
Gene Sequence

>Msa1036610

ATGGTTAACAACTTGCATCAACTACTTAGAAGTCTTTGTTTCAATACTCAGTGGAATTATGCAATCTTTTGGAAGCTCAAACATTGTGCTCCAATGATCTTGACATTGGAGGATGCTTACTATGACAATTCAGATTATTTTGACGCTTCAGAAAATAAGTACTGTCAGAAGACCTTAGAACAGATTGAGGGTGGGAAATTTTCACATGACGCTTTGGGGTTAGCTGTTGCAAAGATGTCATATAATGCATATCCATTAGGGCAAGGTATTGTTGGGCAGGTAGCTGTTACTGGAAAGCATCAGTGGATCTGTGCAGATAATAATCAAGTTACAAGTTCTGGCTTGTCTTTTGAGTTTGCTGATGGGTGGCAATCTCAATTTTCTGCTGGAATTAGGACAATTGTTGTTGTGTCTGTAGTTCCCCTAGGCGTTGTTCAGCTTGGCTCTCTAATAAAACCGGATGTCTTGAAGGAAAAATCATCTTCGGATATTATGCCTGCGTGCATGAGGAATAAAACAGTGGATGTTTTGACGCCCCTTCAATGTTCTGGGAGGAACAACACAACTCATTCTGCTTATTGGGAAATGGGTGATAATATGGTCAAGCATGAAGGGGCCGAGCTCTATAGTGATGTGAGTCCCATTTTGCTTCAGTCAATGTCTGATATGATTAATGTGGAGCATCAGGAATTTGGAGAGATAAGACCTGTAAATGCGAGGGAGTGTGGAGGGGGCAGTAGTGGCTGCAAAAATATGATATTGGACTCTGAACAAAATCGCTCGTCATTTTTAAACAATTCTGCTATAAATAATGTTGGCGTCTATGATTCAATACACCAATCGGAAAAGGATTCCTCCTATACACCGTTGAAGTTTCCAGCTGGATGTGAACTACTTGAAGCACTTGGACCATCTTCTTTGAAAGGGAGTAAATATTTTGATTGGTTGGCTCAGGTTAATCAAGATATGAAAATTGCGGATGTGCCGGATGTGTTTAACACTAGTCAGTTGACTTCTGAATCTCATCCAGAGCATCTTTTGGAAGCAATGGTGGCCAACATCTGTCACAGTAGTAATAATGATGTTAATAGTGGATTATCATTTTGTAGATCAATGCAATCTGCATTGAGTTCTGGAAAAACAACCGATGCTTCTATTCAAGATGTGCACACTATAGACCATCCTTCTCTTGTCAGAGAGGACAAAAACCATTGTTTGAGTTCATCATCTAAAGTTGTTTCTTCTACATGTCCTAGTGCTTGTAGTGAACAATTTGAAAGATCTTCTGAACCATCTAAAAACAGCAAGAAGAGGGCCAGGCCTGGGGAAAGTTGTAGACCTCGGCCAAGAGACAGGCAACTGATCCAAGATCGAATTAAGGAGCTTAGAGAGTTGGTACCGAATGGAGCTAAGTGTAGTATTGATTCACTACTGGAGCGCTCGATAAAGCACATGCTCTTTCTGCAAAGCATAACTAAGCATGCTGACAAGCTAACTAAACTTGCTGATACTAAATCAAAGTTGCATCAAATGGAAACAGACATTCTTGGATCCTCTAGTTCTGAGCAGGGTTCAAGTTGGGCAGTTGAGGTAGGGGGTCATCTGAAAGTTCATTCAATATTAGTGGAGAATCTTAGCAACAACGGACAGATGCTTATTGAGACGCTATGTGAAGAGAGCAGCCATTTTCTTGAAATAGCAGAAGCTGTAAGAAGCTTGGGGCTTACAATTTTGAAGGGCGCAACAAAAGCTCGTGATAAGAAGATATCGATATGCTTTATCGTTGAGGGTGAAAACAACAAAAATGTACACAGATTGGACATCTTGTGGCCACTTGTTCAGATACTACAATCCAAGAGCGTTGTGTATCAACAGTAA

Protein sequence

>Msa1036610

MVNNLHQLLRSLCFNTQWNYAIFWKLKHCAPMILTLEDAYYDNSDYFDASENKYCQKTLEQIEGGKFSHDALGLAVAKMSYNAYPLGQGIVGQVAVTGKHQWICADNNQVTSSGLSFEFADGWQSQFSAGIRTIVVVSVVPLGVVQLGSLIKPDVLKEKSSSDIMPACMRNKTVDVLTPLQCSGRNNTTHSAYWEMGDNMVKHEGAELYSDVSPILLQSMSDMINVEHQEFGEIRPVNARECGGGSSGCKNMILDSEQNRSSFLNNSAINNVGVYDSIHQSEKDSSYTPLKFPAGCELLEALGPSSLKGSKYFDWLAQVNQDMKIADVPDVFNTSQLTSESHPEHLLEAMVANICHSSNNDVNSGLSFCRSMQSALSSGKTTDASIQDVHTIDHPSLVREDKNHCLSSSSKVVSSTCPSACSEQFERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERSIKHMLFLQSITKHADKLTKLADTKSKLHQMETDILGSSSSEQGSSWAVEVGGHLKVHSILVENLSNNGQMLIETLCEESSHFLEIAEAVRSLGLTILKGATKARDKKISICFIVEGENNKNVHRLDILWPLVQILQSKSVVYQQ*