AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1257950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1257950 MtrunA17_Chr4g0056711 90.221 317 22 2 1 312 1 313 0.0 530
Msa1257950 MtrunA17_Chr5g0398451 57.851 242 98 1 67 308 77 314 1.46e-104 308
Msa1257950 MtrunA17_Chr2g0291431 40.590 271 154 3 33 303 25 288 1.12e-67 214
Msa1257950 MtrunA17_Chr3g0109441 51.250 80 37 1 191 268 1 80 3.67e-23 91.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1257950 AT1G12450.1 56.207 290 120 4 17 306 11 293 3.92e-113 330
Msa1257950 AT4G22850.1 58.596 285 109 4 27 310 19 295 1.09e-106 313
Msa1257950 AT4G12000.1 51.803 305 138 5 13 312 6 306 8.21e-99 293
Msa1257950 AT4G12000.2 51.803 305 138 5 13 312 6 306 8.21e-99 293
Msa1257950 AT4G12000.3 51.803 305 138 5 13 312 6 306 8.21e-99 293
Msa1257950 AT4G22850.2 59.184 245 91 4 27 270 19 255 2.59e-89 268
Msa1257950 AT2G02370.2 38.127 299 164 6 14 306 6 289 2.12e-69 219
Msa1257950 AT2G02370.1 38.127 299 164 6 14 306 6 289 2.12e-69 219
Msa1257950 AT2G02370.3 38.127 299 164 6 14 306 6 289 2.12e-69 219
Msa1257950 AT1G03260.1 26.061 165 116 3 144 306 77 237 5.87e-11 62.4

Find 120 sgRNAs with CRISPR-Local

Find 289 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTGTTGTTTCTGAGTTTA+GGG 0.181599 8_2:-59017111 Msa1257950:CDS
CTGTACATGAATTTATTTAT+AGG 0.220256 8_2:-59013600 Msa1257950:three_prime_UTR
AAGTACGGGCCTTACATAAT+TGG 0.221111 8_2:-59016296 Msa1257950:CDS
TCTGTCTCCCAATTTATTAT+TGG 0.230391 8_2:+59016761 None:intergenic
GTTCTGTTGTTTCTGAGTTT+AGG 0.232102 8_2:-59017112 Msa1257950:CDS
TAGATTGCAACAAATATTTC+TGG 0.242638 8_2:+59016254 None:intergenic
CAATAATTGAAGACCATATA+AGG 0.250509 8_2:+59016338 None:intergenic
AAGATTGAGCCAATGATAAA+AGG 0.256065 8_2:+59016570 None:intergenic
CAGATCATTCTCAATGCTTT+AGG 0.259213 8_2:-59013992 Msa1257950:CDS
TGACACTTGGTTATGGATTT+GGG 0.272523 8_2:-59016635 Msa1257950:CDS
AGGTGATTCCAATAATAAAT+TGG 0.276150 8_2:-59016769 Msa1257950:CDS
TTTAGAATAGAAGCCTTCTT+TGG 0.281924 8_2:+59016428 None:intergenic
GTGACACTTGGTTATGGATT+TGG 0.289964 8_2:-59016636 Msa1257950:CDS
GACGATCCGTCGTGTGGTAT+TGG 0.309310 8_2:-59017144 Msa1257950:CDS
GATTTCTCCGTTCCCTTATA+TGG 0.318092 8_2:-59016351 Msa1257950:CDS
TGGCTGTTGTTGTTCTCAAA+TGG 0.320051 8_2:-59017084 Msa1257950:CDS
TTAGAGCTGTTGCCTTAATC+AGG 0.322826 8_2:-59016373 Msa1257950:CDS
AGAAACCTTGTCAATGAGAT+AGG 0.333314 8_2:+59017054 None:intergenic
ACGATCCGTCGTGTGGTATT+GGG 0.356797 8_2:-59017143 Msa1257950:CDS
CGGTGGCGGTGGATGGAAAA+AGG 0.357415 8_2:-59017305 Msa1257950:CDS
GCTGGAGTGACACTTGGTTA+TGG 0.359406 8_2:-59016642 Msa1257950:CDS
AATCTGCTGGTGCAGGAAAC+TGG 0.369463 8_2:-59016406 Msa1257950:CDS
ACTTTCTCCACCACAGTTAA+CGG 0.372710 8_2:+59017190 None:intergenic
GAACGGAGAAATCCTGATTA+AGG 0.382308 8_2:+59016361 None:intergenic
ATAATAACTGCAGCAGCTAT+TGG 0.391137 8_2:-59016603 Msa1257950:CDS
GAGACGGCTGAAGGAGTTGC+AGG 0.399333 8_2:-59013921 Msa1257950:CDS
CAACTCCTTCAGCCGTCTCT+TGG 0.400465 8_2:+59013925 None:intergenic
CATGTTTCGTTTAAGTGAAT+CGG 0.402632 8_2:+59017422 None:intergenic
ATGTTATAGCTGCTTCATAC+TGG 0.409125 8_2:+59013837 None:intergenic
GGCTGTTGTTGTTCTCAAAT+GGG 0.411976 8_2:-59017083 Msa1257950:CDS
AAGAAGAGATTAATGAATAA+TGG 0.418233 8_2:+59017478 None:intergenic
GCCTTACATAATTGGATCCT+TGG 0.420933 8_2:-59016288 Msa1257950:CDS
AACTCCGGTGACGGTGGCGG+TGG 0.422523 8_2:-59017316 Msa1257950:CDS
CAGCCGTCTCTTGGCATAAA+CGG 0.424438 8_2:+59013934 None:intergenic
CATACTGCTGTATATCATAC+TGG 0.438916 8_2:-59013817 Msa1257950:three_prime_UTR
TGCCATCTACACCCTCTATG+TGG 0.439100 8_2:-59016668 Msa1257950:CDS
GTAGATGGCAAAAGTATTGT+TGG 0.444313 8_2:+59016681 None:intergenic
GGTGATTCCAATAATAAATT+GGG 0.444656 8_2:-59016768 Msa1257950:CDS
CGTGTGGTATTGGGTCAAAA+TGG 0.449991 8_2:-59017134 Msa1257950:CDS
CCATCCACCGCCACCGTCAC+CGG 0.465993 8_2:+59017312 None:intergenic
AAGCATTGAGAATGATCTGC+TGG 0.468091 8_2:+59013996 None:intergenic
ACCCACATAGAGGGTGTAGA+TGG 0.470244 8_2:+59016666 None:intergenic
AAGCTGATGATGATAACAAA+GGG 0.478409 8_2:-59017252 Msa1257950:CDS
CCGGTGACGGTGGCGGTGGA+TGG 0.482219 8_2:-59017312 Msa1257950:CDS
GTTGTTGTTCTCAAATGGGT+TGG 0.483636 8_2:-59017079 Msa1257950:CDS
AGATTGAGCCAATGATAAAA+GGG 0.483710 8_2:+59016571 None:intergenic
GGATTTGATTTGAAGTCGGC+AGG 0.484350 8_2:-59013579 Msa1257950:three_prime_UTR
ATTCTAAAATCTGCTGGTGC+AGG 0.484602 8_2:-59016413 Msa1257950:CDS
ACATAATTGGATCCTTGGTC+GGG 0.486638 8_2:-59016283 Msa1257950:CDS
GCTTCTATTCTAAAATCTGC+TGG 0.490012 8_2:-59016419 Msa1257950:CDS
TTGTCGATCAACCCTTTCCA+TGG 0.496814 8_2:+59013732 None:intergenic
ACACCCTCTATGTGGGTGGC+TGG 0.496986 8_2:-59016660 Msa1257950:CDS
GCCATCTACACCCTCTATGT+GGG 0.497988 8_2:-59016667 Msa1257950:CDS
AAAGCCCAGACTAAAACTAC+TGG 0.500282 8_2:+59013868 None:intergenic
AATAATTGAAGACCATATAA+GGG 0.500714 8_2:+59016339 None:intergenic
TACATAATTGGATCCTTGGT+CGG 0.503152 8_2:-59016284 Msa1257950:CDS
AGGGTTGACAAAGGATATAA+AGG 0.504663 8_2:-59013687 Msa1257950:three_prime_UTR
ACCAAGGATCCAATTATGTA+AGG 0.506973 8_2:+59016287 None:intergenic
TATTATAACATTGGTGGGAA+GGG 0.509980 8_2:-59013706 Msa1257950:three_prime_UTR
GATTATATCAAATTGATGCC+TGG 0.514087 8_2:-59017229 Msa1257950:CDS
GTGGCAACAAATGTTAAGTA+CGG 0.515467 8_2:-59016311 Msa1257950:CDS
GTATTATAACATTGGTGGGA+AGG 0.518859 8_2:-59013707 Msa1257950:three_prime_UTR
ATTATTGCAATAACACATGT+TGG 0.519262 8_2:+59013514 None:intergenic
ACGCGTTTGGTGTGATTCGA+AGG 0.519349 8_2:+59017518 None:intergenic
TCATACTGGCAAGTAGCAAA+TGG 0.522529 8_2:-59013803 Msa1257950:three_prime_UTR
TTGACTTTCACTTGAAGCAT+CGG 0.524464 8_2:+59014030 None:intergenic
GTTAACTGTGGTGGAGAAAG+TGG 0.528551 8_2:-59017188 Msa1257950:CDS
CACACGACGGATCGTCTTGA+CGG 0.531902 8_2:+59017151 None:intergenic
TACATTACTCGTGGTGGTGA+TGG 0.535558 8_2:-59017456 Msa1257950:five_prime_UTR
AGTAACTTCATCCATGGAAA+GGG 0.535805 8_2:-59013743 Msa1257950:three_prime_UTR
TAGATGGCAAAAGTATTGTT+GGG 0.536380 8_2:+59016682 None:intergenic
TTATCTAGTAACTTCATCCA+TGG 0.536473 8_2:-59013749 Msa1257950:three_prime_UTR
CAGAGACTTTCAGTCCTCTC+CGG 0.539476 8_2:-59016742 Msa1257950:CDS
GATGATGAGAGAAACGCGTT+TGG 0.539678 8_2:+59017505 None:intergenic
CGACAAATGTATTATAACAT+TGG 0.542386 8_2:-59013715 Msa1257950:three_prime_UTR
TAGTAACTTCATCCATGGAA+AGG 0.544158 8_2:-59013744 Msa1257950:three_prime_UTR
GATAACTCCGGTGACGGTGG+CGG 0.546344 8_2:-59017319 Msa1257950:CDS
GCTGAAGGAGTTGCAGGAGG+AGG 0.547430 8_2:-59013915 Msa1257950:CDS
GTTAGAGAAGTATCCAAAGA+AGG 0.550303 8_2:-59016441 Msa1257950:CDS
AATTGGATCCTTGGTCGGGA+TGG 0.551661 8_2:-59016279 Msa1257950:CDS
CAAATGTATTATAACATTGG+TGG 0.552232 8_2:-59013712 Msa1257950:three_prime_UTR
AAATGTATTATAACATTGGT+GGG 0.555231 8_2:-59013711 Msa1257950:three_prime_UTR
ATCTCTTCTTACATTACTCG+TGG 0.557425 8_2:-59017465 Msa1257950:five_prime_UTR
GCTCATTGCACTGCTAGGAG+AGG 0.563191 8_2:-59013779 Msa1257950:three_prime_UTR
GAAGCTGATGATGATAACAA+AGG 0.566873 8_2:-59017253 Msa1257950:CDS
TGGCAACAAATGTTAAGTAC+GGG 0.566897 8_2:-59016310 Msa1257950:CDS
TATAGGATTTGATTTGAAGT+CGG 0.568285 8_2:-59013583 Msa1257950:three_prime_UTR
ATGGTGCTCATTGCACTGCT+AGG 0.570433 8_2:-59013784 Msa1257950:three_prime_UTR
TGGGTGGCTGGAGTGACACT+TGG 0.580051 8_2:-59016648 Msa1257950:CDS
GAAACCTTGTCAATGAGATA+GGG 0.583464 8_2:+59017055 None:intergenic
ATCTACACCCTCTATGTGGG+TGG 0.585631 8_2:-59016664 Msa1257950:CDS
AGCATTGAGAATGATCTGCT+GGG 0.587919 8_2:+59013997 None:intergenic
GGTAAACACTCATCGGAACC+AGG 0.589023 8_2:+59017211 None:intergenic
TTTAGGCTTCTGTTTAACTG+TGG 0.590721 8_2:-59013975 Msa1257950:CDS
TTCTGGCACCATCCCGACCA+AGG 0.594140 8_2:+59016271 None:intergenic
AACAACAAAATAGTAAGCAC+CGG 0.597356 8_2:+59016723 None:intergenic
TCACCGGAGTTATCCTTCAT+CGG 0.603801 8_2:+59017328 None:intergenic
CACTCCAGCCACCCACATAG+AGG 0.605454 8_2:+59016656 None:intergenic
GGCATAAACGGTGATAATGA+CGG 0.608504 8_2:+59013946 None:intergenic
TCACCGTTTATGCCAAGAGA+CGG 0.609208 8_2:-59013937 Msa1257950:CDS
TTGAAGACCATATAAGGGAA+CGG 0.611668 8_2:+59016344 None:intergenic
AGTTAACGGTAAACACTCAT+CGG 0.614577 8_2:+59017204 None:intergenic
ATGAAGGATAACTCCGGTGA+CGG 0.616962 8_2:-59017325 Msa1257950:CDS
GTGTTTACCGTTAACTGTGG+TGG 0.623625 8_2:-59017197 Msa1257950:CDS
CGTCAAGACGATCCGTCGTG+TGG 0.627835 8_2:-59017150 Msa1257950:CDS
TGGACCCTATCTCATTGACA+AGG 0.629821 8_2:-59017059 Msa1257950:intron
TCTTCTTACATTACTCGTGG+TGG 0.631555 8_2:-59017462 Msa1257950:five_prime_UTR
TTATGCCAAGAGACGGCTGA+AGG 0.635178 8_2:-59013930 Msa1257950:CDS
AAGGATAACTCCGGTGACGG+TGG 0.642097 8_2:-59017322 Msa1257950:CDS
ACTCCAGCCACCCACATAGA+GGG 0.645848 8_2:+59016657 None:intergenic
TTTCCGATGAAGGATAACTC+CGG 0.656857 8_2:-59017331 Msa1257950:exon
GGTCTTCAATTATTGTGCTG+TGG 0.660894 8_2:-59016330 Msa1257950:CDS
ACGGCTGAAGGAGTTGCAGG+AGG 0.663645 8_2:-59013918 Msa1257950:CDS
AACTGTGGTGGAGAAAGTGG+AGG 0.671574 8_2:-59017185 Msa1257950:CDS
TTGGTGGGAAGGGTTGACAA+AGG 0.683900 8_2:-59013696 Msa1257950:three_prime_UTR
CAAAATAGTAAGCACCGGAG+AGG 0.686799 8_2:+59016728 None:intergenic
AGCTGATGATGATAACAAAG+GGG 0.714737 8_2:-59017251 Msa1257950:CDS
ATTGAGAATGATCTGCTGGG+CGG 0.717938 8_2:+59014000 None:intergenic
TTTGACCCAATACCACACGA+CGG 0.720628 8_2:+59017138 None:intergenic
TGAGTGTTTACCGTTAACTG+TGG 0.722193 8_2:-59017200 Msa1257950:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAGATTTTTTTATTATGAA+CGG + chr8_2:59013670-59013689 None:intergenic 10.0%
!!! TTTTTTTTTTTTCTTTTTCT+TGG - chr8_2:59015740-59015759 Msa1257950:intron 10.0%
!!! TTTTTCTTTTTTTCACTTTT+AGG - chr8_2:59013688-59013707 Msa1257950:three_prime_UTR 15.0%
!!! TTTTCTTTTTTTCACTTTTA+GGG - chr8_2:59013689-59013708 Msa1257950:three_prime_UTR 15.0%
!!! CAATTGTTTGTTTTTATATT+TGG - chr8_2:59014043-59014062 Msa1257950:CDS 15.0%
!!! TAAAAAACAGAAATTTTCAA+CGG + chr8_2:59014096-59014115 None:intergenic 15.0%
!!! ATAATTTAATGTATTGGTTA+TGG - chr8_2:59014217-59014236 Msa1257950:intron 15.0%
!!! TTGCATAATTTTAATTTTTC+AGG - chr8_2:59014269-59014288 Msa1257950:intron 15.0%
!!! TTTTTGTTTTCTTCTTATTT+TGG - chr8_2:59016136-59016155 Msa1257950:intron 15.0%
!!! TTTTTGTTTTCTTCTTATTT+TGG - chr8_2:59016136-59016155 Msa1257950:intron 15.0%
!!! CTTTTTTCTTTATTAATTCA+CGG - chr8_2:59016743-59016762 Msa1257950:CDS 15.0%
!! AAGAAGAGATTAATGAATAA+TGG + chr8_2:59013586-59013605 None:intergenic 20.0%
!!! TTTATATTTGGATTGTTTTG+TGG - chr8_2:59014055-59014074 Msa1257950:CDS 20.0%
!! CTCTCAATAATTTAATGTAT+TGG - chr8_2:59014211-59014230 Msa1257950:intron 20.0%
!!! CATAATTTTAATTTTTCAGG+AGG - chr8_2:59014272-59014291 Msa1257950:intron 20.0%
!! AATAATTGAAGACCATATAA+GGG + chr8_2:59014725-59014744 None:intergenic 20.0%
!!! TGAATTCATATCATTTTATG+TGG - chr8_2:59014878-59014897 Msa1257950:intron 20.0%
!!! AAAACCTTTAAAGATTCATA+AGG + chr8_2:59015535-59015554 None:intergenic 20.0%
!! TTCTCATTTAGATCTTAATT+AGG - chr8_2:59015796-59015815 Msa1257950:intron 20.0%
!! CTTACATCTATATAAATTCT+TGG + chr8_2:59015861-59015880 None:intergenic 20.0%
!! AAAGTTGTCTATCATAATAA+TGG - chr8_2:59015906-59015925 Msa1257950:intron 20.0%
!! GACAAATAGTATTAGAATAT+GGG + chr8_2:59016031-59016050 None:intergenic 20.0%
!! TGACAAATAGTATTAGAATA+TGG + chr8_2:59016032-59016051 None:intergenic 20.0%
!!! GATAATTTTTTCCCTTTATT+TGG + chr8_2:59016096-59016115 None:intergenic 20.0%
!! GACAAATAGTATTAGAATAT+GGG + chr8_2:59016031-59016050 None:intergenic 20.0%
!! TGACAAATAGTATTAGAATA+TGG + chr8_2:59016032-59016051 None:intergenic 20.0%
!!! GATAATTTTTTCCCTTTATT+TGG + chr8_2:59016096-59016115 None:intergenic 20.0%
!! CGTGAATTAATAAAGAAAAA+AGG + chr8_2:59016745-59016764 None:intergenic 20.0%
!!! TTTTAAGAATTTACCTTGTA+TGG - chr8_2:59016776-59016795 Msa1257950:intron 20.0%
!! AAATGTATTATAACATTGGT+GGG - chr8_2:59017350-59017369 Msa1257950:five_prime_UTR 20.0%
!! AACAAAAATCGTTTACTATA+TGG - chr8_2:59017413-59017432 Msa1257950:five_prime_UTR 20.0%
!! CTGTACATGAATTTATTTAT+AGG - chr8_2:59017461-59017480 Msa1257950:five_prime_UTR 20.0%
! TTGTGTCAATGAATATCTAA+TGG - chr8_2:59014245-59014264 Msa1257950:intron 25.0%
! TGTGTCAATGAATATCTAAT+GGG - chr8_2:59014246-59014265 Msa1257950:intron 25.0%
! AGGTGATTCCAATAATAAAT+TGG - chr8_2:59014292-59014311 Msa1257950:intron 25.0%
! GGTGATTCCAATAATAAATT+GGG - chr8_2:59014293-59014312 Msa1257950:intron 25.0%
!! CACTTACTTCAATTTTATGA+TGG + chr8_2:59014517-59014536 None:intergenic 25.0%
! CAATAATTGAAGACCATATA+AGG + chr8_2:59014726-59014745 None:intergenic 25.0%
! TAGATTGCAACAAATATTTC+TGG + chr8_2:59014810-59014829 None:intergenic 25.0%
! TTACTTTATGCCTTCATATA+TGG - chr8_2:59015048-59015067 Msa1257950:intron 25.0%
!! CTTCAGTTAGATTTCTTTTA+TGG - chr8_2:59015080-59015099 Msa1257950:intron 25.0%
!! ATTTTCTTGAAATCTAAACG+AGG + chr8_2:59015181-59015200 None:intergenic 25.0%
! TTACTTTATGCCTTCATATA+TGG - chr8_2:59015048-59015067 Msa1257950:intron 25.0%
!! TCAACTTTTACCATATATGA+AGG + chr8_2:59015222-59015241 None:intergenic 25.0%
! GAGTATGGAAATAATTATGA+AGG + chr8_2:59015449-59015468 None:intergenic 25.0%
! ATAATTATTTCCATACTCTG+AGG - chr8_2:59015451-59015470 Msa1257950:intron 25.0%
!!! ATCTTTAAAGGTTTTGTTTG+TGG - chr8_2:59015540-59015559 Msa1257950:intron 25.0%
! TTCAATTTGTACTTGAAACA+AGG - chr8_2:59015583-59015602 Msa1257950:intron 25.0%
! AGGAAATATAAAAGAGTTGT+AGG - chr8_2:59015689-59015708 Msa1257950:intron 25.0%
!!! TGTATTAATTTTTTTGCTCG+TGG + chr8_2:59015990-59016009 None:intergenic 25.0%
!! TCGTTTTGTGATATATTCTA+TGG - chr8_2:59016052-59016071 Msa1257950:intron 25.0%
!!! TGTTTTCTTCTTATTTTGGA+AGG - chr8_2:59016140-59016159 Msa1257950:intron 25.0%
!!! GTTTTCTTCTTATTTTGGAA+GGG - chr8_2:59016141-59016160 Msa1257950:intron 25.0%
! ATAAGCTAGAATTACGTATT+TGG + chr8_2:59016217-59016236 None:intergenic 25.0%
! AGCTTATGTGATATATTCTA+TGG - chr8_2:59016230-59016249 Msa1257950:intron 25.0%
!!! TGTATTATTTTTTTTGCTCG+TGG + chr8_2:59016278-59016297 None:intergenic 25.0%
!! TCGTTTTGTGATATATTCTA+TGG - chr8_2:59016052-59016071 Msa1257950:intron 25.0%
!!! TGTTTTCTTCTTATTTTGGA+AGG - chr8_2:59016140-59016159 Msa1257950:intron 25.0%
!!! GTTTTCTTCTTATTTTGGAA+GGG - chr8_2:59016141-59016160 Msa1257950:intron 25.0%
! GTCGATGTCAATTTAATATT+TGG - chr8_2:59016718-59016737 Msa1257950:CDS 25.0%
! GAAATAGATTAAACCATACA+AGG + chr8_2:59016792-59016811 None:intergenic 25.0%
! TGTATGGTTTAATCTATTTC+TGG - chr8_2:59016792-59016811 Msa1257950:intron 25.0%
! TAAAATACATGTGAAATGCA+AGG + chr8_2:59016861-59016880 None:intergenic 25.0%
!! ACATGTATTTTATGTTGCTA+TGG - chr8_2:59016869-59016888 Msa1257950:intron 25.0%
! GGGTAAATGGAAATAATAAT+GGG + chr8_2:59016899-59016918 None:intergenic 25.0%
! TGGGTAAATGGAAATAATAA+TGG + chr8_2:59016900-59016919 None:intergenic 25.0%
! AACTAATGATGCAAAATATC+TGG - chr8_2:59016953-59016972 Msa1257950:intron 25.0%
! AATAGCCAATAAGTTCAATA+AGG + chr8_2:59016980-59016999 None:intergenic 25.0%
! CGACAAATGTATTATAACAT+TGG - chr8_2:59017346-59017365 Msa1257950:exon 25.0%
! CAAATGTATTATAACATTGG+TGG - chr8_2:59017349-59017368 Msa1257950:five_prime_UTR 25.0%
!!! ATTTTTGTTGTCAAGTTAGA+TGG + chr8_2:59017402-59017421 None:intergenic 25.0%
!!! TATAGGATTTGATTTGAAGT+CGG - chr8_2:59017478-59017497 Msa1257950:five_prime_UTR 25.0%
! ATTATTGCAATAACACATGT+TGG + chr8_2:59017550-59017569 None:intergenic 25.0%
CATGTTTCGTTTAAGTGAAT+CGG + chr8_2:59013642-59013661 None:intergenic 30.0%
! AAGCTGATGATGATAACAAA+GGG - chr8_2:59013809-59013828 Msa1257950:three_prime_UTR 30.0%
GATTATATCAAATTGATGCC+TGG - chr8_2:59013832-59013851 Msa1257950:three_prime_UTR 30.0%
!! TTCTGTTGTTTCTGAGTTTA+GGG - chr8_2:59013950-59013969 Msa1257950:CDS 30.0%
!! TGGATTGTTTTGTGGAATTT+AGG - chr8_2:59014063-59014082 Msa1257950:intron 30.0%
!! GGATTGTTTTGTGGAATTTA+GGG - chr8_2:59014064-59014083 Msa1257950:intron 30.0%
TCTGTCTCCCAATTTATTAT+TGG + chr8_2:59014303-59014322 None:intergenic 30.0%
AACAACAAAATAGTAAGCAC+CGG + chr8_2:59014341-59014360 None:intergenic 30.0%
!! TAGATGGCAAAAGTATTGTT+GGG + chr8_2:59014382-59014401 None:intergenic 30.0%
AGATTGAGCCAATGATAAAA+GGG + chr8_2:59014493-59014512 None:intergenic 30.0%
AAGATTGAGCCAATGATAAA+AGG + chr8_2:59014494-59014513 None:intergenic 30.0%
!! TGTGCCATTAAGATTTTGTA+TGG - chr8_2:59014538-59014557 Msa1257950:intron 30.0%
ATGTTTCATGAATCTATGCA+GGG - chr8_2:59014594-59014613 Msa1257950:intron 30.0%
! TTTAGAATAGAAGCCTTCTT+TGG + chr8_2:59014636-59014655 None:intergenic 30.0%
! ATTTGTTGCAATCTATACGT+AGG - chr8_2:59014815-59014834 Msa1257950:intron 30.0%
ACAAAAAATGATACGAGAGT+GGG + chr8_2:59014851-59014870 None:intergenic 30.0%
AACAAAAAATGATACGAGAG+TGG + chr8_2:59014852-59014871 None:intergenic 30.0%
GCGAATATAGGTTATGTAAT+TGG - chr8_2:59014976-59014995 Msa1257950:intron 30.0%
TGAGTATGTTTAGCAGAATA+TGG - chr8_2:59015002-59015021 Msa1257950:intron 30.0%
ACGTCCTTATGAATCTTTAA+AGG - chr8_2:59015528-59015547 Msa1257950:intron 30.0%
GTTCAAATTCAAGTAAGGAA+TGG + chr8_2:59015667-59015686 None:intergenic 30.0%
CCTATGTTCAAATTCAAGTA+AGG + chr8_2:59015672-59015691 None:intergenic 30.0%
CCTTACTTGAATTTGAACAT+AGG - chr8_2:59015669-59015688 Msa1257950:intron 30.0%
TAGGAATACTATCTATCACA+CGG - chr8_2:59015815-59015834 Msa1257950:intron 30.0%
GAATATGGGAATAGCTAAAA+AGG + chr8_2:59016017-59016036 None:intergenic 30.0%
!! TTTTCCCTTTATTTGGTCAA+GGG + chr8_2:59016089-59016108 None:intergenic 30.0%
!! TTTTTCCCTTTATTTGGTCA+AGG + chr8_2:59016090-59016109 None:intergenic 30.0%
TGGAAGGGTTATAGAAAAAA+AGG - chr8_2:59016156-59016175 Msa1257950:intron 30.0%
GAATATGGGAATAGCTAAAA+AGG + chr8_2:59016017-59016036 None:intergenic 30.0%
!! TTTTCCCTTTATTTGGTCAA+GGG + chr8_2:59016089-59016108 None:intergenic 30.0%
!! TTTTTCCCTTTATTTGGTCA+AGG + chr8_2:59016090-59016109 None:intergenic 30.0%
TGGAAGGGTTATAGAAAAAA+AGG - chr8_2:59016156-59016175 Msa1257950:intron 30.0%
ATCAGCTAGAATTACGTATT+TGG + chr8_2:59016505-59016524 None:intergenic 30.0%
! TTGACTAGTAGGATCAATTT+TGG - chr8_2:59016534-59016553 Msa1257950:intron 30.0%
! TGACTAGTAGGATCAATTTT+GGG - chr8_2:59016535-59016554 Msa1257950:intron 30.0%
TTGGGAGATAAAAATTTCTG+TGG - chr8_2:59016553-59016572 Msa1257950:intron 30.0%
CAAAAATTTGCCCTATTTCA+AGG + chr8_2:59016671-59016690 None:intergenic 30.0%
TGTGAAATGCAAGGAATTAA+TGG + chr8_2:59016852-59016871 None:intergenic 30.0%
TATTTCCATTTACCCATTTC+TGG - chr8_2:59016904-59016923 Msa1257950:intron 30.0%
!!! GGGAATTTTGATTAAGACAT+TGG - chr8_2:59017008-59017027 Msa1257950:intron 30.0%
TTATCTAGTAACTTCATCCA+TGG - chr8_2:59017312-59017331 Msa1257950:CDS 30.0%
TATTATAACATTGGTGGGAA+GGG - chr8_2:59017355-59017374 Msa1257950:five_prime_UTR 30.0%
! CTATGTCAATTTTAAATGCG+AGG - chr8_2:59017592-59017611 Msa1257950:five_prime_UTR 30.0%
!!! GGTTTCGATTTTGTTGCTTT+TGG + chr8_2:59013496-59013515 None:intergenic 35.0%
!!! TTGCAAGAAGCGCTTTTTTT+GGG + chr8_2:59013517-59013536 None:intergenic 35.0%
!!! TTTGCAAGAAGCGCTTTTTT+TGG + chr8_2:59013518-59013537 None:intergenic 35.0%
ATCTCTTCTTACATTACTCG+TGG - chr8_2:59013596-59013615 Msa1257950:three_prime_UTR 35.0%
! TTTTGTGCATTTTCCGATGA+AGG - chr8_2:59013720-59013739 Msa1257950:three_prime_UTR 35.0%
ATGGAAAAAGGAGGTTGTTT+CGG - chr8_2:59013768-59013787 Msa1257950:three_prime_UTR 35.0%
! GAAGCTGATGATGATAACAA+AGG - chr8_2:59013808-59013827 Msa1257950:three_prime_UTR 35.0%
! AGCTGATGATGATAACAAAG+GGG - chr8_2:59013810-59013829 Msa1257950:three_prime_UTR 35.0%
AGTTAACGGTAAACACTCAT+CGG + chr8_2:59013860-59013879 None:intergenic 35.0%
!! GTTCTGTTGTTTCTGAGTTT+AGG - chr8_2:59013949-59013968 Msa1257950:CDS 35.0%
!! GTTTCTGAGTTTAGGGTTTT+TGG - chr8_2:59013957-59013976 Msa1257950:CDS 35.0%
GAAACCTTGTCAATGAGATA+GGG + chr8_2:59014009-59014028 None:intergenic 35.0%
AGAAACCTTGTCAATGAGAT+AGG + chr8_2:59014010-59014029 None:intergenic 35.0%
!! GTAGATGGCAAAAGTATTGT+TGG + chr8_2:59014383-59014402 None:intergenic 35.0%
TGACACTTGGTTATGGATTT+GGG - chr8_2:59014426-59014445 Msa1257950:intron 35.0%
ATAATAACTGCAGCAGCTAT+TGG - chr8_2:59014458-59014477 Msa1257950:intron 35.0%
! GCCATTAAGATTTTGTATGG+CGG - chr8_2:59014541-59014560 Msa1257950:intron 35.0%
ACCGCCATACAAAATCTTAA+TGG + chr8_2:59014545-59014564 None:intergenic 35.0%
TCGATTCATGTGCACTAATT+TGG - chr8_2:59014566-59014585 Msa1257950:intron 35.0%
GATGTTTCATGAATCTATGC+AGG - chr8_2:59014593-59014612 Msa1257950:intron 35.0%
!! GTTAGAGAAGTATCCAAAGA+AGG - chr8_2:59014620-59014639 Msa1257950:intron 35.0%
!! GCTTCTATTCTAAAATCTGC+TGG - chr8_2:59014642-59014661 Msa1257950:intron 35.0%
TTGAAGACCATATAAGGGAA+CGG + chr8_2:59014720-59014739 None:intergenic 35.0%
GTGGCAACAAATGTTAAGTA+CGG - chr8_2:59014750-59014769 Msa1257950:intron 35.0%
TGGCAACAAATGTTAAGTAC+GGG - chr8_2:59014751-59014770 Msa1257950:intron 35.0%
ACCAAGGATCCAATTATGTA+AGG + chr8_2:59014777-59014796 None:intergenic 35.0%
TACATAATTGGATCCTTGGT+CGG - chr8_2:59014777-59014796 Msa1257950:intron 35.0%
AGACATCAAAAGTAGGCAAA+AGG + chr8_2:59014946-59014965 None:intergenic 35.0%
ATGGCATAGACATCAAAAGT+AGG + chr8_2:59014953-59014972 None:intergenic 35.0%
CATAACCTATATTCGCAGTA+TGG + chr8_2:59014972-59014991 None:intergenic 35.0%
GCAACTTGTACCATATATGA+AGG + chr8_2:59015061-59015080 None:intergenic 35.0%
CCATGTGAAATGTGAAAACA+TGG + chr8_2:59015326-59015345 None:intergenic 35.0%
! CCATGTTTTCACATTTCACA+TGG - chr8_2:59015323-59015342 Msa1257950:intron 35.0%
! ATTATTTCCATACTCTGAGG+TGG - chr8_2:59015454-59015473 Msa1257950:intron 35.0%
!! TTATTTCCATACTCTGAGGT+GGG - chr8_2:59015455-59015474 Msa1257950:intron 35.0%
! TGATTTTGCCTACTACTTCT+TGG - chr8_2:59015482-59015501 Msa1257950:intron 35.0%
GTTACAAACCAAGAAGTAGT+AGG + chr8_2:59015493-59015512 None:intergenic 35.0%
! TTTCTTTTTCTTGGAGCAGT+TGG - chr8_2:59015749-59015768 Msa1257950:intron 35.0%
AGGAATACTATCTATCACAC+GGG - chr8_2:59015816-59015835 Msa1257950:intron 35.0%
!!! ATTTTTTTGCTCGTGGAACT+GGG + chr8_2:59015983-59016002 None:intergenic 35.0%
!!! AATTTTTTTGCTCGTGGAAC+TGG + chr8_2:59015984-59016003 None:intergenic 35.0%
TGATTCCCTTGACCAAATAA+AGG - chr8_2:59016081-59016100 Msa1257950:intron 35.0%
GATTCCCTTGACCAAATAAA+GGG - chr8_2:59016082-59016101 Msa1257950:intron 35.0%
!!! TTTTTTTTGCTCGTGGAACT+GGG + chr8_2:59016271-59016290 None:intergenic 35.0%
!!! ATTTTTTTTGCTCGTGGAAC+TGG + chr8_2:59016272-59016291 None:intergenic 35.0%
TGATTCCCTTGACCAAATAA+AGG - chr8_2:59016081-59016100 Msa1257950:intron 35.0%
GATTCCCTTGACCAAATAAA+GGG - chr8_2:59016082-59016101 Msa1257950:intron 35.0%
!! GGGCAAATTTTTGCTTTGAA+AGG - chr8_2:59016678-59016697 Msa1257950:CDS 35.0%
TAACACCAGAAATGGGTAAA+TGG + chr8_2:59016912-59016931 None:intergenic 35.0%
CTGGACCTTATTGAACTTAT+TGG - chr8_2:59016972-59016991 Msa1257950:intron 35.0%
! ACTTATTGGCTATTTACTGC+AGG - chr8_2:59016986-59017005 Msa1257950:intron 35.0%
! CTTATTGGCTATTTACTGCA+GGG - chr8_2:59016987-59017006 Msa1257950:intron 35.0%
! TTATTGGCTATTTACTGCAG+GGG - chr8_2:59016988-59017007 Msa1257950:intron 35.0%
TTGACTTTCACTTGAAGCAT+CGG + chr8_2:59017034-59017053 None:intergenic 35.0%
CAGATCATTCTCAATGCTTT+AGG - chr8_2:59017069-59017088 Msa1257950:CDS 35.0%
TTTAGGCTTCTGTTTAACTG+TGG - chr8_2:59017086-59017105 Msa1257950:CDS 35.0%
!!! ATAGTCCAGTAGTTTTAGTC+TGG - chr8_2:59017188-59017207 Msa1257950:CDS 35.0%
!!! TAGTCCAGTAGTTTTAGTCT+GGG - chr8_2:59017189-59017208 Msa1257950:CDS 35.0%
ATGTTATAGCTGCTTCATAC+TGG + chr8_2:59017227-59017246 None:intergenic 35.0%
CATACTGCTGTATATCATAC+TGG - chr8_2:59017244-59017263 Msa1257950:CDS 35.0%
TAGTAACTTCATCCATGGAA+AGG - chr8_2:59017317-59017336 Msa1257950:CDS 35.0%
AGTAACTTCATCCATGGAAA+GGG - chr8_2:59017318-59017337 Msa1257950:CDS 35.0%
GTATTATAACATTGGTGGGA+AGG - chr8_2:59017354-59017373 Msa1257950:five_prime_UTR 35.0%
AGGGTTGACAAAGGATATAA+AGG - chr8_2:59017374-59017393 Msa1257950:five_prime_UTR 35.0%
TCTTCTTACATTACTCGTGG+TGG - chr8_2:59013599-59013618 Msa1257950:three_prime_UTR 40.0%
TTTCCGATGAAGGATAACTC+CGG - chr8_2:59013730-59013749 Msa1257950:three_prime_UTR 40.0%
TGAGTGTTTACCGTTAACTG+TGG - chr8_2:59013861-59013880 Msa1257950:three_prime_UTR 40.0%
ACTTTCTCCACCACAGTTAA+CGG + chr8_2:59013874-59013893 None:intergenic 40.0%
! TGGCTGTTGTTGTTCTCAAA+TGG - chr8_2:59013977-59013996 Msa1257950:CDS 40.0%
! GGCTGTTGTTGTTCTCAAAT+GGG - chr8_2:59013978-59013997 Msa1257950:CDS 40.0%
! GTTGTTGTTCTCAAATGGGT+TGG - chr8_2:59013982-59014001 Msa1257950:CDS 40.0%
GTGACACTTGGTTATGGATT+TGG - chr8_2:59014425-59014444 Msa1257950:intron 40.0%
!! GTGTCACTCCCTTTTATCAT+TGG - chr8_2:59014482-59014501 Msa1257950:intron 40.0%
TTCATGAATCTATGCAGGGA+TGG - chr8_2:59014598-59014617 Msa1257950:intron 40.0%
!! ATTCTAAAATCTGCTGGTGC+AGG - chr8_2:59014648-59014667 Msa1257950:intron 40.0%
TTAGAGCTGTTGCCTTAATC+AGG - chr8_2:59014688-59014707 Msa1257950:intron 40.0%
GAACGGAGAAATCCTGATTA+AGG + chr8_2:59014703-59014722 None:intergenic 40.0%
GATTTCTCCGTTCCCTTATA+TGG - chr8_2:59014710-59014729 Msa1257950:intron 40.0%
GGTCTTCAATTATTGTGCTG+TGG - chr8_2:59014731-59014750 Msa1257950:intron 40.0%
AAGTACGGGCCTTACATAAT+TGG - chr8_2:59014765-59014784 Msa1257950:intron 40.0%
GCCTTACATAATTGGATCCT+TGG - chr8_2:59014773-59014792 Msa1257950:intron 40.0%
ACATAATTGGATCCTTGGTC+GGG - chr8_2:59014778-59014797 Msa1257950:intron 40.0%
CATCAAAAGTAGGCAAAAGG+TGG + chr8_2:59014943-59014962 None:intergenic 40.0%
CTATGCCATACTGCGAATAT+AGG - chr8_2:59014964-59014983 Msa1257950:intron 40.0%
AACGAGGAAACGTGAAAACA+TGG + chr8_2:59015165-59015184 None:intergenic 40.0%
AACCAAGATGAAGAGTCTAC+AGG + chr8_2:59015301-59015320 None:intergenic 40.0%
GAATGGAGAATCAAAACGAG+AGG + chr8_2:59015650-59015669 None:intergenic 40.0%
ATAGACAACTTTGCCATGCA+GGG + chr8_2:59015898-59015917 None:intergenic 40.0%
GAAGTGAAGTTTCCATAGGT+GGG + chr8_2:59015957-59015976 None:intergenic 40.0%
! ATGAGAGTTCGTTGACTAGT+AGG - chr8_2:59016523-59016542 Msa1257950:intron 40.0%
TTTCTGTGGTTGATTGATGC+TGG - chr8_2:59016567-59016586 Msa1257950:CDS 40.0%
!! CTGGTGGTTTTACATTGCAT+TGG - chr8_2:59016586-59016605 Msa1257950:CDS 40.0%
!! GTGGTTTTACATTGCATTGG+TGG - chr8_2:59016589-59016608 Msa1257950:CDS 40.0%
TTTGCCCTATTTCAAGGTCA+GGG + chr8_2:59016665-59016684 None:intergenic 40.0%
ATTTGCCCTATTTCAAGGTC+AGG + chr8_2:59016666-59016685 None:intergenic 40.0%
!! ACCCATTTCTGGTGTTAGTT+TGG - chr8_2:59016915-59016934 Msa1257950:intron 40.0%
GCCAAACTAACACCAGAAAT+GGG + chr8_2:59016919-59016938 None:intergenic 40.0%
AGCCAAACTAACACCAGAAA+TGG + chr8_2:59016920-59016939 None:intergenic 40.0%
! AGCATTGAGAATGATCTGCT+GGG + chr8_2:59017067-59017086 None:intergenic 40.0%
!! AAGCATTGAGAATGATCTGC+TGG + chr8_2:59017068-59017087 None:intergenic 40.0%
! GGCATAAACGGTGATAATGA+CGG + chr8_2:59017118-59017137 None:intergenic 40.0%
AAAGCCCAGACTAAAACTAC+TGG + chr8_2:59017196-59017215 None:intergenic 40.0%
TCATACTGGCAAGTAGCAAA+TGG - chr8_2:59017258-59017277 Msa1257950:CDS 40.0%
GATGATGAGAGAAACGCGTT+TGG + chr8_2:59013559-59013578 None:intergenic 45.0%
! TACATTACTCGTGGTGGTGA+TGG - chr8_2:59013605-59013624 Msa1257950:three_prime_UTR 45.0%
TCACCGGAGTTATCCTTCAT+CGG + chr8_2:59013736-59013755 None:intergenic 45.0%
ATGAAGGATAACTCCGGTGA+CGG - chr8_2:59013736-59013755 Msa1257950:three_prime_UTR 45.0%
GTGTTTACCGTTAACTGTGG+TGG - chr8_2:59013864-59013883 Msa1257950:three_prime_UTR 45.0%
! GTTAACTGTGGTGGAGAAAG+TGG - chr8_2:59013873-59013892 Msa1257950:exon 45.0%
TTTGACCCAATACCACACGA+CGG + chr8_2:59013926-59013945 None:intergenic 45.0%
! CGTGTGGTATTGGGTCAAAA+TGG - chr8_2:59013927-59013946 Msa1257950:CDS 45.0%
TGGACCCTATCTCATTGACA+AGG - chr8_2:59014002-59014021 Msa1257950:CDS 45.0%
!! CAAAATAGTAAGCACCGGAG+AGG + chr8_2:59014336-59014355 None:intergenic 45.0%
GTCTTGCAGACTCTTCATCT+TGG - chr8_2:59015135-59015154 Msa1257950:intron 45.0%
GTCCTGTAGACTCTTCATCT+TGG - chr8_2:59015296-59015315 Msa1257950:intron 45.0%
GATAGACAACTTTGCCATGC+AGG + chr8_2:59015899-59015918 None:intergenic 45.0%
GGAAGTGAAGTTTCCATAGG+TGG + chr8_2:59015958-59015977 None:intergenic 45.0%
GTGGGAAGTGAAGTTTCCAT+AGG + chr8_2:59015961-59015980 None:intergenic 45.0%
CATGCCCTGACCTTGAAATA+GGG - chr8_2:59016658-59016677 Msa1257950:CDS 45.0%
ATTGAGAATGATCTGCTGGG+CGG + chr8_2:59017064-59017083 None:intergenic 45.0%
TCACCGTTTATGCCAAGAGA+CGG - chr8_2:59017124-59017143 Msa1257950:CDS 45.0%
TTGTCGATCAACCCTTTCCA+TGG + chr8_2:59017332-59017351 None:intergenic 45.0%
!! GGATTTGATTTGAAGTCGGC+AGG - chr8_2:59017482-59017501 Msa1257950:five_prime_UTR 45.0%
!! ACGCGTTTGGTGTGATTCGA+AGG + chr8_2:59013546-59013565 None:intergenic 50.0%
GGTAAACACTCATCGGAACC+AGG + chr8_2:59013853-59013872 None:intergenic 50.0%
! AACTGTGGTGGAGAAAGTGG+AGG - chr8_2:59013876-59013895 Msa1257950:exon 50.0%
ACGATCCGTCGTGTGGTATT+GGG - chr8_2:59013918-59013937 Msa1257950:CDS 50.0%
CAGAGACTTTCAGTCCTCTC+CGG - chr8_2:59014319-59014338 Msa1257950:intron 50.0%
TGCCATCTACACCCTCTATG+TGG - chr8_2:59014393-59014412 Msa1257950:intron 50.0%
GCCATCTACACCCTCTATGT+GGG - chr8_2:59014394-59014413 Msa1257950:intron 50.0%
! ACCCACATAGAGGGTGTAGA+TGG + chr8_2:59014398-59014417 None:intergenic 50.0%
ATCTACACCCTCTATGTGGG+TGG - chr8_2:59014397-59014416 Msa1257950:intron 50.0%
GCTGGAGTGACACTTGGTTA+TGG - chr8_2:59014419-59014438 Msa1257950:intron 50.0%
AATCTGCTGGTGCAGGAAAC+TGG - chr8_2:59014655-59014674 Msa1257950:intron 50.0%
AATTGGATCCTTGGTCGGGA+TGG - chr8_2:59014782-59014801 Msa1257950:intron 50.0%
CAATCTCCCACCTCAGAGTA+TGG + chr8_2:59015464-59015483 None:intergenic 50.0%
GACTGCTCTATTTCCCTGCA+TGG - chr8_2:59015882-59015901 Msa1257950:intron 50.0%
GTTTCCATAGGTGGGCATTC+AGG + chr8_2:59015949-59015968 None:intergenic 50.0%
! TTTTGCTCGTGGAACTGGGT+GGG + chr8_2:59015979-59015998 None:intergenic 50.0%
! TTTTTGCTCGTGGAACTGGG+TGG + chr8_2:59015980-59015999 None:intergenic 50.0%
! TTTTGCTCGTGGAACTGGGT+GGG + chr8_2:59015979-59015998 None:intergenic 50.0%
! TTTTTGCTCGTGGAACTGGG+TGG + chr8_2:59015980-59015999 None:intergenic 50.0%
CTGTGGTTGATTGATGCTGG+TGG - chr8_2:59016570-59016589 Msa1257950:CDS 50.0%
CTGCAGCGATGCTTACAGAT+GGG + chr8_2:59016618-59016637 None:intergenic 50.0%
TCAGGGCATGCTAAAAGCCT+TGG + chr8_2:59016648-59016667 None:intergenic 50.0%
GCATGCCCTGACCTTGAAAT+AGG - chr8_2:59016657-59016676 Msa1257950:CDS 50.0%
CAGCCGTCTCTTGGCATAAA+CGG + chr8_2:59017130-59017149 None:intergenic 50.0%
TTATGCCAAGAGACGGCTGA+AGG - chr8_2:59017131-59017150 Msa1257950:CDS 50.0%
ATGGTGCTCATTGCACTGCT+AGG - chr8_2:59017277-59017296 Msa1257950:CDS 50.0%
TTGGTGGGAAGGGTTGACAA+AGG - chr8_2:59017365-59017384 Msa1257950:five_prime_UTR 50.0%
! AAGGATAACTCCGGTGACGG+TGG - chr8_2:59013739-59013758 Msa1257950:three_prime_UTR 55.0%
TGGCGGTGGATGGAAAAAGG+AGG - chr8_2:59013759-59013778 Msa1257950:three_prime_UTR 55.0%
CACACGACGGATCGTCTTGA+CGG + chr8_2:59013913-59013932 None:intergenic 55.0%
GACGATCCGTCGTGTGGTAT+TGG - chr8_2:59013917-59013936 Msa1257950:CDS 55.0%
ACTCCAGCCACCCACATAGA+GGG + chr8_2:59014407-59014426 None:intergenic 55.0%
AGTGCCTGAATGCCCACCTA+TGG - chr8_2:59015942-59015961 Msa1257950:intron 55.0%
GCTGCAGCGATGCTTACAGA+TGG + chr8_2:59016619-59016638 None:intergenic 55.0%
ATCGCTGCAGCACTTCACCA+AGG - chr8_2:59016628-59016647 Msa1257950:CDS 55.0%
CAACTCCTTCAGCCGTCTCT+TGG + chr8_2:59017139-59017158 None:intergenic 55.0%
GCTCATTGCACTGCTAGGAG+AGG - chr8_2:59017282-59017301 Msa1257950:CDS 55.0%
! GATAACTCCGGTGACGGTGG+CGG - chr8_2:59013742-59013761 Msa1257950:three_prime_UTR 60.0%
! CGGTGGCGGTGGATGGAAAA+AGG - chr8_2:59013756-59013775 Msa1257950:three_prime_UTR 60.0%
CGTCAAGACGATCCGTCGTG+TGG - chr8_2:59013911-59013930 Msa1257950:CDS 60.0%
ACACCCTCTATGTGGGTGGC+TGG - chr8_2:59014401-59014420 Msa1257950:intron 60.0%
CACTCCAGCCACCCACATAG+AGG + chr8_2:59014408-59014427 None:intergenic 60.0%
TGGGTGGCTGGAGTGACACT+TGG - chr8_2:59014413-59014432 Msa1257950:intron 60.0%
TTCTGGCACCATCCCGACCA+AGG + chr8_2:59014793-59014812 None:intergenic 60.0%
GAGACGGCTGAAGGAGTTGC+AGG - chr8_2:59017140-59017159 Msa1257950:CDS 60.0%
ACGGCTGAAGGAGTTGCAGG+AGG - chr8_2:59017143-59017162 Msa1257950:CDS 60.0%
GCTGAAGGAGTTGCAGGAGG+AGG - chr8_2:59017146-59017165 Msa1257950:CDS 60.0%
! AACTCCGGTGACGGTGGCGG+TGG - chr8_2:59013745-59013764 Msa1257950:three_prime_UTR 70.0%
CCATCCACCGCCACCGTCAC+CGG + chr8_2:59013752-59013771 None:intergenic 70.0%
! CCGGTGACGGTGGCGGTGGA+TGG - chr8_2:59013749-59013768 Msa1257950:three_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 59013453 59017630 59013453 ID=Msa1257950;Name=Msa1257950
chr8_2 mRNA 59013453 59017630 59013453 ID=Msa1257950-mRNA-1;Parent=Msa1257950;Name=Msa1257950-mRNA-1;_AED=0.23;_eAED=0.23;_QI=283|0.5|0.8|0.8|0.5|0.6|5|439|312
chr8_2 exon 59013453 59014075 59013453 ID=Msa1257950-mRNA-1:exon:18311;Parent=Msa1257950-mRNA-1
chr8_2 exon 59016251 59016468 59016251 ID=Msa1257950-mRNA-1:exon:18310;Parent=Msa1257950-mRNA-1
chr8_2 exon 59016554 59016792 59016554 ID=Msa1257950-mRNA-1:exon:18309;Parent=Msa1257950-mRNA-1
chr8_2 exon 59016989 59016998 59016989 ID=Msa1257950-mRNA-1:exon:18308;Parent=Msa1257950-mRNA-1
chr8_2 exon 59017060 59017630 59017060 ID=Msa1257950-mRNA-1:exon:18307;Parent=Msa1257950-mRNA-1
chr8_2 five_prime_UTR 59017348 59017630 59017348 ID=Msa1257950-mRNA-1:five_prime_utr;Parent=Msa1257950-mRNA-1
chr8_2 CDS 59017060 59017347 59017060 ID=Msa1257950-mRNA-1:cds;Parent=Msa1257950-mRNA-1
chr8_2 CDS 59016989 59016998 59016989 ID=Msa1257950-mRNA-1:cds;Parent=Msa1257950-mRNA-1
chr8_2 CDS 59016554 59016792 59016554 ID=Msa1257950-mRNA-1:cds;Parent=Msa1257950-mRNA-1
chr8_2 CDS 59016251 59016468 59016251 ID=Msa1257950-mRNA-1:cds;Parent=Msa1257950-mRNA-1
chr8_2 CDS 59013892 59014075 59013892 ID=Msa1257950-mRNA-1:cds;Parent=Msa1257950-mRNA-1
chr8_2 three_prime_UTR 59013453 59013891 59013453 ID=Msa1257950-mRNA-1:three_prime_utr;Parent=Msa1257950-mRNA-1
Gene Sequence

>Msa1257950

ATGAAGGATAACTCCGGTGACGGTGGCGGTGGATGGAAAAAGGAGGTTGTTTCGGACGTAACTATCACAATTGAAGCTGATGATGATAACAAAGGGGATTATATCAAATTGATGCCTGGTTCCGATGAGTGTTTACCGTTAACTGTGGTGGAGAAAGTGGAGGAGTGTTCTCTGCCGTCAAGACGATCCGTCGTGTGGTATTGGGTCAAAATGGTTCTGTTGTTTCTGAGTTTAGGGTTTTTGGCTGTTGTTGTTCTCAAATGGGTTGGACCCTATCTCATTGACAAGGGCTTTTTCCGAGGTGATTCCAATAATAAATTGGGAGACAGAGACTTTCAGTCCTCTCCGGTGCTTACTATTTTGTTGTTTGCTTCAGTAGCAATTTTCCCAACAATACTTTTGCCATCTACACCCTCTATGTGGGTGGCTGGAGTGACACTTGGTTATGGATTTGGGTTCTTGCTAATAATAACTGCAGCAGCTATTGGTGTGTCACTCCCTTTTATCATTGGCTCAATCTTCCATCATAAAATTGAAGGATGGTTAGAGAAGTATCCAAAGAAGGCTTCTATTCTAAAATCTGCTGGTGCAGGAAACTGGTTTCATCAGTTTAGAGCTGTTGCCTTAATCAGGATTTCTCCGTTCCCTTATATGGTCTTCAATTATTGTGCTGTGGCAACAAATGTTAAGTACGGGCCTTACATAATTGGATCCTTGGTCGGGATGGTGCCAGAAATATTTGTTGCAATCTATACGGGAATTTTGATTAAGACATTGGCCGATGCTTCAAGTGAAAGTCAATCTCTATCCGCCCAGCAGATCATTCTCAATGCTTTAGGCTTCTGTTTAACTGTGGTTACAACCGTCATTATCACCGTTTATGCCAAGAGACGGCTGAAGGAGTTGCAGGAGGAGGACAAGATGTTGCTGCTGCAATAG
Protein sequence

>Msa1257950

MKDNSGDGGGGWKKEVVSDVTITIEADDDNKGDYIKLMPGSDECLPLTVVEKVEECSLPSRRSVVWYWVKMVLLFLSLGFLAVVVLKWVGPYLIDKGFFRGDSNNKLGDRDFQSSPVLTILLFASVAIFPTILLPSTPSMWVAGVTLGYGFGFLLIITAAAIGVSLPFIIGSIFHHKIEGWLEKYPKKASILKSAGAGNWFHQFRAVALIRISPFPYMVFNYCAVATNVKYGPYIIGSLVGMVPEIFVAIYTGILIKTLADASSESQSLSAQQIILNALGFCLTVVTTVIITVYAKRRLKELQEEDKMLLLQ*