Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1259180 | XP_013457822.1 | 98.486 | 1123 | 17 | 0 | 1 | 1123 | 1 | 1123 | 0.0 | 2303 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1259180 | sp|O82504|RDR2_ARATH | 59.857 | 1121 | 436 | 11 | 5 | 1119 | 6 | 1118 | 0.0 | 1372 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1259180 | A0A072US42 | 98.486 | 1123 | 17 | 0 | 1 | 1123 | 1 | 1123 | 0.0 | 2303 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1259180 | Msa1298570 | 0.978238 | 2.078369e-145 | -8.615850e-47 |
Msa1259180 | Msa1330870 | 0.960544 | 1.120316e-118 | -8.615850e-47 |
Msa1259180 | Msa1396610 | 0.986359 | 1.591212e-166 | -8.615850e-47 |
Msa1172020 | Msa1259180 | 0.950648 | 1.065856e-108 | -8.615850e-47 |
Msa1172080 | Msa1259180 | 0.884833 | 1.367985e-71 | -8.615850e-47 |
Msa1172160 | Msa1259180 | 0.981276 | 3.391239e-152 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1259180 | MtrunA17_Chr4g0059271 | 98.486 | 1123 | 17 | 0 | 1 | 1123 | 1 | 1123 | 0.0 | 2303 |
Msa1259180 | MtrunA17_Chr1g0161451 | 37.445 | 1127 | 652 | 17 | 10 | 1115 | 4 | 1098 | 0.0 | 744 |
Msa1259180 | MtrunA17_Chr1g0161491 | 37.150 | 1144 | 637 | 20 | 7 | 1119 | 17 | 1109 | 0.0 | 735 |
Msa1259180 | MtrunA17_Chr1g0161471 | 37.610 | 1138 | 643 | 17 | 7 | 1119 | 3 | 1098 | 0.0 | 734 |
Msa1259180 | MtrunA17_Chr1g0161521 | 37.772 | 1149 | 620 | 25 | 6 | 1115 | 2 | 1094 | 0.0 | 710 |
Msa1259180 | MtrunA17_Chr1g0161511 | 37.118 | 1145 | 642 | 22 | 6 | 1119 | 2 | 1099 | 0.0 | 690 |
Msa1259180 | MtrunA17_Chr3g0137841 | 36.603 | 948 | 530 | 22 | 217 | 1116 | 254 | 1178 | 1.11e-177 | 553 |
Msa1259180 | MtrunA17_Chr4g0059261 | 54.190 | 179 | 47 | 3 | 879 | 1056 | 1 | 145 | 1.85e-49 | 172 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1259180 | AT4G11130.1 | 59.857 | 1121 | 436 | 11 | 5 | 1119 | 6 | 1118 | 0.0 | 1372 |
Msa1259180 | AT1G14790.1 | 38.707 | 1129 | 627 | 20 | 10 | 1118 | 4 | 1087 | 0.0 | 744 |
Msa1259180 | AT3G49500.3 | 34.791 | 1006 | 586 | 21 | 152 | 1115 | 193 | 1170 | 4.92e-172 | 538 |
Msa1259180 | AT3G49500.4 | 34.791 | 1006 | 586 | 21 | 152 | 1115 | 193 | 1170 | 4.92e-172 | 538 |
Msa1259180 | AT3G49500.1 | 34.791 | 1006 | 586 | 21 | 152 | 1115 | 193 | 1170 | 4.92e-172 | 538 |
Msa1259180 | AT3G49500.2 | 34.791 | 1006 | 586 | 21 | 152 | 1115 | 193 | 1170 | 4.92e-172 | 538 |
Msa1259180 | AT3G49500.5 | 34.791 | 1006 | 586 | 21 | 152 | 1115 | 193 | 1170 | 4.92e-172 | 538 |
Msa1259180 | AT2G19930.2 | 26.723 | 595 | 318 | 22 | 452 | 960 | 269 | 831 | 8.40e-30 | 128 |
Msa1259180 | AT2G19930.3 | 26.723 | 595 | 318 | 22 | 452 | 960 | 263 | 825 | 8.93e-30 | 128 |
Msa1259180 | AT2G19930.1 | 26.723 | 595 | 318 | 22 | 452 | 960 | 269 | 831 | 1.06e-29 | 128 |
Msa1259180 | AT2G19910.2 | 23.772 | 631 | 361 | 22 | 426 | 969 | 247 | 844 | 2.42e-28 | 124 |
Msa1259180 | AT2G19910.1 | 23.594 | 640 | 360 | 22 | 426 | 969 | 247 | 853 | 8.64e-28 | 122 |
Msa1259180 | AT2G19920.4 | 24.121 | 597 | 343 | 21 | 447 | 963 | 267 | 833 | 4.43e-26 | 116 |
Msa1259180 | AT2G19920.3 | 24.121 | 597 | 343 | 21 | 447 | 963 | 267 | 833 | 5.09e-26 | 116 |
Msa1259180 | AT2G19920.1 | 24.121 | 597 | 343 | 21 | 447 | 963 | 268 | 834 | 5.22e-26 | 116 |
Msa1259180 | AT2G19920.2 | 24.121 | 597 | 343 | 21 | 447 | 963 | 281 | 847 | 5.36e-26 | 116 |
Find 280 sgRNAs with CRISPR-Local
Find 456 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTAAATGTAAAAGCTATTA+TGG | 0.121735 | 8_2:+60725351 | None:intergenic |
AAAGGCAGAGACTTGATTTC+TGG | 0.185536 | 8_2:-60730324 | Msa1259180:CDS |
AATCTCAATCACTTTGAAAA+AGG | 0.199716 | 8_2:-60728627 | Msa1259180:CDS |
AAATCAAGTCTCTGCCTTTC+AGG | 0.202069 | 8_2:+60730328 | None:intergenic |
ACCCATTCTTGCTGCACATT+TGG | 0.246017 | 8_2:+60728388 | None:intergenic |
GGAAGCAGCCTTGGATGTTT+TGG | 0.247594 | 8_2:-60727916 | Msa1259180:CDS |
TTGCAAGTTTGAATCAATTA+TGG | 0.249399 | 8_2:+60725833 | None:intergenic |
ATGTCTCCATAACTTATATT+TGG | 0.262842 | 8_2:+60725294 | None:intergenic |
CTGGTGATCATATGCTTCTT+TGG | 0.269431 | 8_2:+60725776 | None:intergenic |
TATATATCCAAAGGTGTATT+AGG | 0.273653 | 8_2:-60725870 | Msa1259180:CDS |
TGCCTTGTATTTCCACAAAA+AGG | 0.275740 | 8_2:-60727483 | Msa1259180:CDS |
GTCGTTGGCGGTGGCGGTAT+GGG | 0.277922 | 8_2:+60730684 | None:intergenic |
TCTTGTTCTCGGCGAGAGTT+AGG | 0.279675 | 8_2:+60730527 | None:intergenic |
GAATGCTTTGCGTCACTAAA+TGG | 0.283123 | 8_2:-60728070 | Msa1259180:CDS |
AAATGTAGCTGCCAAGTTTA+AGG | 0.286106 | 8_2:-60729326 | Msa1259180:CDS |
ATCTCTTTGATGAGCTTCTA+TGG | 0.288965 | 8_2:-60725681 | Msa1259180:CDS |
TCAAACCTCTCCATGAAATC+TGG | 0.294279 | 8_2:+60725903 | None:intergenic |
AATTAAAGATGAGGCGCTTT+TGG | 0.304782 | 8_2:-60727988 | Msa1259180:CDS |
GGTCGTTGGCGGTGGCGGTA+TGG | 0.306523 | 8_2:+60730683 | None:intergenic |
TTCCTTCAGCATTTCAAATT+CGG | 0.314317 | 8_2:-60728187 | Msa1259180:CDS |
TTGATTCAAACTTGCAAGTA+AGG | 0.321264 | 8_2:-60725827 | Msa1259180:CDS |
TCTCTTGGTTTCAAAGATCT+TGG | 0.325340 | 8_2:+60725930 | None:intergenic |
TATTCTTCTCAGCTGAGATA+TGG | 0.333555 | 8_2:-60729379 | Msa1259180:intron |
TGCTATCTCCACCGCACATT+TGG | 0.333953 | 8_2:-60726063 | Msa1259180:CDS |
ATTCGGTATGGTGGATATAA+AGG | 0.339975 | 8_2:-60728170 | Msa1259180:CDS |
TCAGAGGTGATTTCAATATC+TGG | 0.341597 | 8_2:+60728305 | None:intergenic |
AAGAGAGTTTCCAGATTTCA+TGG | 0.342194 | 8_2:-60725913 | Msa1259180:CDS |
AAGCGTCGAGACAGAGGAAA+TGG | 0.352979 | 8_2:+60730488 | None:intergenic |
GTCATACTCATACTACAAAA+TGG | 0.353669 | 8_2:+60725270 | None:intergenic |
GCCAAGGATATATCAGAAAA+TGG | 0.356475 | 8_2:-60729356 | Msa1259180:CDS |
AGAGATAATGATTGATTAAG+AGG | 0.361305 | 8_2:+60725179 | None:intergenic |
GGCCCTTGGGCACAAATATT+CGG | 0.361333 | 8_2:+60727754 | None:intergenic |
CTTATTTGCAGAGGGATAAC+AGG | 0.361659 | 8_2:-60725608 | Msa1259180:CDS |
GTAAATGTAAAAGCTATTAT+GGG | 0.362309 | 8_2:+60725352 | None:intergenic |
AGGAAGAAGGCCTCGTATAA+TGG | 0.368988 | 8_2:-60726366 | Msa1259180:CDS |
TTAAACTTGGCAGCTACATT+TGG | 0.370092 | 8_2:+60729328 | None:intergenic |
GATCACCAGCTTGAAGTTGA+TGG | 0.370925 | 8_2:-60725762 | Msa1259180:CDS |
GGATTCCAAGTTACCTTATG+AGG | 0.373899 | 8_2:-60729059 | Msa1259180:CDS |
CTTCGAGATGGGATTCTAGT+TGG | 0.375811 | 8_2:-60728551 | Msa1259180:CDS |
GTGATTGAGATTGCATTGTT+TGG | 0.377189 | 8_2:+60728638 | None:intergenic |
TCCGCTTGTCAAGTGTCGTT+TGG | 0.377684 | 8_2:-60729080 | Msa1259180:CDS |
TAATTCCTAAGGTGGACAAC+AGG | 0.378356 | 8_2:+60728006 | None:intergenic |
AAGGAGAAGTTTCTTGTTCT+CGG | 0.378407 | 8_2:+60730516 | None:intergenic |
TACTGTTTCTCAGATGGTAT+TGG | 0.379094 | 8_2:-60728272 | Msa1259180:CDS |
TGTTTCTTTCAACTTTGGTT+TGG | 0.385184 | 8_2:+60730794 | None:intergenic |
CGATGGGAAAACCAGCATAA+AGG | 0.385658 | 8_2:+60730407 | None:intergenic |
TGATGAGTTGATTGACTTGT+TGG | 0.387549 | 8_2:-60728978 | Msa1259180:CDS |
GCCGCATGAATATCAACTTA+TGG | 0.388044 | 8_2:-60725499 | Msa1259180:CDS |
TAGTTTCCAAATATAAGTTA+TGG | 0.390100 | 8_2:-60725300 | Msa1259180:three_prime_UTR |
CCGAGTTCTGATTGGCTGCT+TGG | 0.391015 | 8_2:-60727733 | Msa1259180:CDS |
TTACCTCTAGTGTCACCTTA+TGG | 0.398055 | 8_2:+60726342 | None:intergenic |
GACGCGAACGGTGGGTGTTT+CGG | 0.398686 | 8_2:+60730717 | None:intergenic |
TTCTCAACTTTAAAGTCCAT+TGG | 0.399433 | 8_2:-60729244 | Msa1259180:CDS |
ATGAAGGAATCACCATGGTT+AGG | 0.399658 | 8_2:+60730740 | None:intergenic |
TTCCAAATGTGCAGCAAGAA+TGG | 0.406312 | 8_2:-60728390 | Msa1259180:CDS |
GGCCATTTCAAAAGTTTGCC+TGG | 0.408999 | 8_2:+60728349 | None:intergenic |
ACCCAACGCCCTTCTCTTGA+AGG | 0.410402 | 8_2:-60730212 | Msa1259180:intron |
ATACTTATCTCTGTGACTTA+TGG | 0.410941 | 8_2:+60725716 | None:intergenic |
TATGAACAAGAGAATTCAAT+TGG | 0.412886 | 8_2:+60729029 | None:intergenic |
ATGATAATTTCTTAAAAGAA+TGG | 0.414373 | 8_2:+60728129 | None:intergenic |
ATTCTTCTCAGCTGAGATAT+GGG | 0.418568 | 8_2:-60729378 | Msa1259180:intron |
CAGTGAAGAATTAGAAGAAA+AGG | 0.419054 | 8_2:-60727517 | Msa1259180:CDS |
ATTAGAAGAAAAGGGCTTGA+GGG | 0.420122 | 8_2:-60727508 | Msa1259180:CDS |
GGCCAAGAGTAGAAAATGTC+TGG | 0.424194 | 8_2:-60726015 | Msa1259180:CDS |
CTTCTTCCTGTGTAGTCCAT+TGG | 0.424934 | 8_2:+60726380 | None:intergenic |
ATGAAATCTGGAAACTCTCT+TGG | 0.426283 | 8_2:+60725915 | None:intergenic |
CGCCTCATCTTTAATTCCTA+AGG | 0.427060 | 8_2:+60727995 | None:intergenic |
CCAATCAGAACTCGGCCCTT+GGG | 0.428098 | 8_2:+60727741 | None:intergenic |
TGAAGGAATCACCATGGTTA+GGG | 0.430736 | 8_2:+60730741 | None:intergenic |
AACAATGGTGCCCTTTATGC+TGG | 0.433646 | 8_2:-60730418 | Msa1259180:CDS |
ATGGGAAGGTGTTCGAGGTT+GGG | 0.433950 | 8_2:-60730356 | Msa1259180:CDS |
ATGCTTTACCACATGATTTG+AGG | 0.435061 | 8_2:+60728724 | None:intergenic |
AACTGCGGTCAAATTCTGTT+TGG | 0.437464 | 8_2:-60728490 | Msa1259180:CDS |
TCACCTCCAGAGCACTCGTT+TGG | 0.439573 | 8_2:+60726467 | None:intergenic |
GAGACTGGTCTATTGAACTA+TGG | 0.441612 | 8_2:-60727708 | Msa1259180:CDS |
GATGGGAAAACCAGCATAAA+GGG | 0.442690 | 8_2:+60730408 | None:intergenic |
TCAAGGACTCTGATATCTCC+TGG | 0.445905 | 8_2:+60727549 | None:intergenic |
TGCTCTGGAGGTGATCTTGA+CGG | 0.447828 | 8_2:-60726458 | Msa1259180:CDS |
AAAGATCTTGGCATTTCTGC+AGG | 0.448689 | 8_2:+60725942 | None:intergenic |
TTACATGATCAATGATACTT+TGG | 0.449411 | 8_2:-60726087 | Msa1259180:CDS |
GATAGGTAAGGCTCACCGTT+TGG | 0.450059 | 8_2:+60727831 | None:intergenic |
TGATTTGAGGTTTCAAGCTC+GGG | 0.451659 | 8_2:+60728737 | None:intergenic |
ACTGAGGATGAAATGCTAAC+TGG | 0.452037 | 8_2:-60725651 | Msa1259180:CDS |
TCTCAACTTTAAAGTCCATT+GGG | 0.455669 | 8_2:-60729243 | Msa1259180:CDS |
TCGGAGAAGGTCGTTGGCGG+TGG | 0.457047 | 8_2:+60730675 | None:intergenic |
AAGGCAGAGACTTGATTTCT+GGG | 0.457890 | 8_2:-60730323 | Msa1259180:CDS |
ATATCCCTGTTGTCCACCTT+AGG | 0.460453 | 8_2:-60728011 | Msa1259180:CDS |
AAGTGTGTTTCTTTCAACTT+TGG | 0.460703 | 8_2:+60730789 | None:intergenic |
AGGAAAGATGTTGACTGATA+AGG | 0.461221 | 8_2:-60727937 | Msa1259180:CDS |
TTACATTTGTCGAAGAGGAT+TGG | 0.461457 | 8_2:-60728670 | Msa1259180:CDS |
GCTCTGGAGGTGATCTTGAC+GGG | 0.461676 | 8_2:-60726457 | Msa1259180:CDS |
GAGCCTTGAGCATCATTGAT+AGG | 0.462886 | 8_2:+60727814 | None:intergenic |
AGCTTTCGTTGTAATATTTG+TGG | 0.463226 | 8_2:+60725448 | None:intergenic |
GAGAAGGTCGTTGGCGGTGG+CGG | 0.463497 | 8_2:+60730678 | None:intergenic |
TTATATATTTCAGTTCTAAG+AGG | 0.464161 | 8_2:+60728590 | None:intergenic |
TCTTCAGCGACTACACCAAC+TGG | 0.465472 | 8_2:-60730606 | Msa1259180:CDS |
CATGGGAAGGTGTTCGAGGT+TGG | 0.467410 | 8_2:-60730357 | Msa1259180:CDS |
TGCTGACCGTGAACACGATA+AGG | 0.469968 | 8_2:-60726036 | Msa1259180:CDS |
ACCTTCAAGAGAAGGGCGTT+GGG | 0.470440 | 8_2:+60730211 | None:intergenic |
GCCTCGTATAATGGACCATA+AGG | 0.471634 | 8_2:-60726357 | Msa1259180:CDS |
CTGCCAAGTTTAAGGATGAT+AGG | 0.472401 | 8_2:-60729318 | Msa1259180:CDS |
TCTTGGCCTTATCGTGTTCA+CGG | 0.472605 | 8_2:+60726030 | None:intergenic |
AAGACCCTCATAAGGTAACT+TGG | 0.473229 | 8_2:+60729054 | None:intergenic |
AATTTGGAGATGAAAACTTA+AGG | 0.473286 | 8_2:-60727644 | Msa1259180:CDS |
AGTGAAGAATTAGAAGAAAA+GGG | 0.474853 | 8_2:-60727516 | Msa1259180:CDS |
ACTTGATTTCTGGGTCACTC+AGG | 0.476813 | 8_2:-60730314 | Msa1259180:CDS |
CTTGTTCTCGGCGAGAGTTA+GGG | 0.479196 | 8_2:+60730528 | None:intergenic |
GATAGCACACGTATTATAGT+AGG | 0.479258 | 8_2:-60727606 | Msa1259180:CDS |
TGAAGCACACTCATGCAATC+AGG | 0.481424 | 8_2:+60730382 | None:intergenic |
TCGTTGGCGGTGGCGGTATG+GGG | 0.481457 | 8_2:+60730685 | None:intergenic |
GAATTTGAAGGATCTAAGTC+TGG | 0.481716 | 8_2:-60729140 | Msa1259180:CDS |
TACCTTCAAGAGAAGGGCGT+TGG | 0.481883 | 8_2:+60730210 | None:intergenic |
CTCAGTAAAGGATCTTCAGC+TGG | 0.482094 | 8_2:-60725553 | Msa1259180:CDS |
TATTGAATATTCTTCGAGAT+GGG | 0.484103 | 8_2:-60728562 | Msa1259180:CDS |
ATGATTTGAGGTTTCAAGCT+CGG | 0.484910 | 8_2:+60728736 | None:intergenic |
GACTGATAAGGAAGCAGCCT+TGG | 0.485593 | 8_2:-60727925 | Msa1259180:CDS |
TCCAAATGTGCAGCAAGAAT+GGG | 0.486535 | 8_2:-60728389 | Msa1259180:CDS |
GTTCATCTACGGGTAGCACT+TGG | 0.486565 | 8_2:-60725245 | Msa1259180:three_prime_UTR |
AATCTTTGACGGGGTAATCA+AGG | 0.487076 | 8_2:+60728772 | None:intergenic |
TTAAGCTTTCCATGGATTGT+CGG | 0.487901 | 8_2:-60725417 | Msa1259180:CDS |
AGCGGCCAACGGTGGTTTCG+AGG | 0.488002 | 8_2:+60730650 | None:intergenic |
CAGTTATGCGGACAAATACT+TGG | 0.489042 | 8_2:+60727685 | None:intergenic |
GATTGACTTGTTGGTAAGCT+TGG | 0.489425 | 8_2:-60728969 | Msa1259180:CDS |
TACATGATCAATGATACTTT+GGG | 0.492368 | 8_2:-60726086 | Msa1259180:CDS |
AGCAGATATCAGAGAATGGA+TGG | 0.494048 | 8_2:-60728438 | Msa1259180:CDS |
CCTCATCCAAACGAGTGCTC+TGG | 0.495371 | 8_2:-60726473 | Msa1259180:CDS |
ACGGTGGGTGTTTCGGATGA+AGG | 0.497872 | 8_2:+60730724 | None:intergenic |
GAGTATGACATGTTCATCTA+CGG | 0.498802 | 8_2:-60725256 | Msa1259180:three_prime_UTR |
GGTGGCGGTATGGGGTATGT+TGG | 0.499318 | 8_2:+60730693 | None:intergenic |
GAGGTATCGGAGAAGGTCGT+TGG | 0.500329 | 8_2:+60730669 | None:intergenic |
GAATTAAATCCACATCTTGA+GGG | 0.500437 | 8_2:+60728327 | None:intergenic |
TTAAAATGTTTAAAGAGTGC+CGG | 0.502743 | 8_2:+60725117 | None:intergenic |
ATTGGCTGCTTGGATGAGAC+TGG | 0.502836 | 8_2:-60727723 | Msa1259180:CDS |
ACAAGCGGAACTGTTTCAGT+TGG | 0.503145 | 8_2:+60729094 | None:intergenic |
CACACGTATTATAGTAGGTA+AGG | 0.504821 | 8_2:-60727601 | Msa1259180:CDS |
TGTAAAAGCTATTATGGGAC+AGG | 0.505147 | 8_2:+60725357 | None:intergenic |
TCGAATTCTAATCTCAGTAA+AGG | 0.506278 | 8_2:-60725565 | Msa1259180:CDS |
GCATGAGTGTGCTTCAATCA+TGG | 0.506625 | 8_2:-60730375 | Msa1259180:CDS |
GACAGAGGAAATGGGAGCTA+AGG | 0.506663 | 8_2:+60730497 | None:intergenic |
GTTGTAATATTTGTGGTGAT+AGG | 0.508964 | 8_2:+60725455 | None:intergenic |
GAAGATTTCGAGAGCGAAGA+CGG | 0.509538 | 8_2:+60730624 | None:intergenic |
ACACCTTTGGATATATACAT+AGG | 0.510540 | 8_2:+60725876 | None:intergenic |
AGGATATATCAGAAAATGGC+GGG | 0.511059 | 8_2:-60729352 | Msa1259180:CDS |
GAGATAATGATTGATTAAGA+GGG | 0.511789 | 8_2:+60725180 | None:intergenic |
CCGTCAAAGATTTATTGCCT+TGG | 0.512172 | 8_2:-60728761 | Msa1259180:CDS |
TTCAGCTGGAAGCTAAAGAA+TGG | 0.512543 | 8_2:-60725539 | Msa1259180:CDS |
TTCAAATTCTCTCTGTAGAG+CGG | 0.513592 | 8_2:+60729154 | None:intergenic |
AGGGTCTTGTTAACGAGTGC+CGG | 0.514581 | 8_2:-60725136 | Msa1259180:three_prime_UTR |
CAAGGCAATAAATCTTTGAC+GGG | 0.515130 | 8_2:+60728762 | None:intergenic |
GTTGGCTGAGCTGCATTCCA+TGG | 0.515719 | 8_2:-60725991 | Msa1259180:CDS |
GGAATTAAATCCACATCTTG+AGG | 0.517345 | 8_2:+60728326 | None:intergenic |
AAGCTTGGATGCAGAAACTA+AGG | 0.517404 | 8_2:-60728954 | Msa1259180:CDS |
GATGGGTATTGTTCTGATGA+AGG | 0.517540 | 8_2:-60730241 | Msa1259180:CDS |
CAGGAGATACGGAGATATGA+AGG | 0.520429 | 8_2:-60725589 | Msa1259180:CDS |
GCATTTCAAATTCGGTATGG+TGG | 0.520713 | 8_2:-60728179 | Msa1259180:CDS |
AAAATGTCACCGACAATCCA+TGG | 0.520826 | 8_2:+60725408 | None:intergenic |
CCAAGGCAATAAATCTTTGA+CGG | 0.522349 | 8_2:+60728761 | None:intergenic |
AGCGTCGAGACAGAGGAAAT+GGG | 0.523626 | 8_2:+60730489 | None:intergenic |
CAACGGTGGTTTCGAGGTAT+CGG | 0.524158 | 8_2:+60730656 | None:intergenic |
CCAGAGCACTCGTTTGGATG+AGG | 0.526144 | 8_2:+60726473 | None:intergenic |
AATTGGAAAAGACCCTCATA+AGG | 0.526321 | 8_2:+60729046 | None:intergenic |
TATGTTGGTGACGCGAACGG+TGG | 0.526738 | 8_2:+60730708 | None:intergenic |
TCAAATTCTCTCTGTAGAGC+GGG | 0.527074 | 8_2:+60729155 | None:intergenic |
CCTCCGATGACATCATTCCT+AGG | 0.527766 | 8_2:-60730465 | Msa1259180:CDS |
TAGAACTGAAATATATAAGC+GGG | 0.527945 | 8_2:-60728585 | Msa1259180:CDS |
ATATCTCCTGGGTGAAGACA+AGG | 0.528826 | 8_2:+60727561 | None:intergenic |
CAGAGGGATAACAGGAGATA+CGG | 0.530199 | 8_2:-60725600 | Msa1259180:CDS |
GATATTGAAATCACCTCTGA+TGG | 0.531578 | 8_2:-60728302 | Msa1259180:CDS |
TAAACTTTCCAAAACATCCA+AGG | 0.533340 | 8_2:+60727908 | None:intergenic |
GTATTGAATATTCTTCGAGA+TGG | 0.533472 | 8_2:-60728563 | Msa1259180:CDS |
GTCAGTTGTTCAGTTCGTCC+AGG | 0.534486 | 8_2:-60728367 | Msa1259180:CDS |
CAATCATGGGAAGGTGTTCG+AGG | 0.534880 | 8_2:-60730361 | Msa1259180:CDS |
AATAATGTACCTTCAAGAGA+AGG | 0.536479 | 8_2:+60730203 | None:intergenic |
AAGGATCTAAGTCTGGAAGA+TGG | 0.537009 | 8_2:-60729133 | Msa1259180:CDS |
TCAGCATTTCAAATTCGGTA+TGG | 0.541932 | 8_2:-60728182 | Msa1259180:CDS |
TTACGAGGAAGAGCAGGCCT+AGG | 0.542828 | 8_2:+60730448 | None:intergenic |
GATTCCAAGTTACCTTATGA+GGG | 0.542917 | 8_2:-60729058 | Msa1259180:CDS |
GAGGATCAACTGCAGTTGCT+AGG | 0.543687 | 8_2:-60727957 | Msa1259180:CDS |
AATTAGAAGAAAAGGGCTTG+AGG | 0.544606 | 8_2:-60727509 | Msa1259180:CDS |
ATGCGGTTACGAGGAAGAGC+AGG | 0.546517 | 8_2:+60730442 | None:intergenic |
ATGCCGAATATTTGTGCCCA+AGG | 0.547697 | 8_2:-60727757 | Msa1259180:CDS |
ATACCTATCATCCTTAAACT+TGG | 0.548449 | 8_2:+60729315 | None:intergenic |
CGGAGGAAGCGTCGAGACAG+AGG | 0.549019 | 8_2:+60730482 | None:intergenic |
TTCATCTACGGGTAGCACTT+GGG | 0.550826 | 8_2:-60725244 | Msa1259180:three_prime_UTR |
GCTCTACAGAGAGAATTTGA+AGG | 0.554058 | 8_2:-60729152 | Msa1259180:CDS |
AGCTCAAACTGAAAATCCAA+TGG | 0.558132 | 8_2:-60726396 | Msa1259180:CDS |
CTTGATTTCTGGGTCACTCA+GGG | 0.560046 | 8_2:-60730313 | Msa1259180:CDS |
CTTTGCAAAATCAACTGCCA+TGG | 0.561690 | 8_2:+60725974 | None:intergenic |
ATCTCTCGATTGAGAAAGCA+CGG | 0.562182 | 8_2:+60728035 | None:intergenic |
CCCTCTGCAAATAAGACGCA+CGG | 0.562446 | 8_2:+60725616 | None:intergenic |
AGTATGACATGTTCATCTAC+GGG | 0.563607 | 8_2:-60725255 | Msa1259180:three_prime_UTR |
TTGAGCATCATTGATAGGTA+AGG | 0.565773 | 8_2:+60727819 | None:intergenic |
GAGGTTGGGTTATGCCTGAA+AGG | 0.566352 | 8_2:-60730342 | Msa1259180:CDS |
CCAAGCAGCCAATCAGAACT+CGG | 0.567198 | 8_2:+60727733 | None:intergenic |
GACGGAGGAGCGGCCAACGG+TGG | 0.569208 | 8_2:+60730642 | None:intergenic |
GAAGACGGAGGAGCGGCCAA+CGG | 0.569296 | 8_2:+60730639 | None:intergenic |
CATCCAAACGAGTGCTCTGG+AGG | 0.571761 | 8_2:-60726470 | Msa1259180:CDS |
CTCAGCTGAGATATGGGCCA+AGG | 0.573402 | 8_2:-60729372 | Msa1259180:intron |
ACTCATGCAATCAGGACCGA+TGG | 0.575204 | 8_2:+60730390 | None:intergenic |
TGAAATGGCCCCTCAAGATG+TGG | 0.577783 | 8_2:-60728336 | Msa1259180:CDS |
GGGTATGTTGGTGACGCGAA+CGG | 0.578509 | 8_2:+60730705 | None:intergenic |
TTCTAGTCAAGATGCTGCAT+AGG | 0.579278 | 8_2:-60727863 | Msa1259180:CDS |
CAATGGACTACACAGGAAGA+AGG | 0.581873 | 8_2:-60726379 | Msa1259180:CDS |
CATGAGTGTGCTTCAATCAT+GGG | 0.584065 | 8_2:-60730374 | Msa1259180:CDS |
AGGTTTCAAGCTCGGGACCA+AGG | 0.584833 | 8_2:+60728744 | None:intergenic |
CAAAACCATCAACTTCAAGC+TGG | 0.585160 | 8_2:+60725757 | None:intergenic |
GAGTAGAAAATGTCTGGAGT+TGG | 0.587027 | 8_2:-60726009 | Msa1259180:CDS |
CCGCAGTTGACTAGCAGAGA+AGG | 0.587586 | 8_2:+60728505 | None:intergenic |
AACTGGAAATCTCGCGGAGT+AGG | 0.587687 | 8_2:-60730589 | Msa1259180:CDS |
CCTCGTAACCGCATCAACAA+TGG | 0.589683 | 8_2:-60730433 | Msa1259180:CDS |
AAACCTATGTATATATCCAA+AGG | 0.590044 | 8_2:-60725879 | Msa1259180:CDS |
CTCTGGAGGTGATCTTGACG+GGG | 0.590343 | 8_2:-60726456 | Msa1259180:CDS |
AAGCAGCAGATATCAGAGAA+TGG | 0.591150 | 8_2:-60728442 | Msa1259180:CDS |
GTATCGGAGAAGGTCGTTGG+CGG | 0.591381 | 8_2:+60730672 | None:intergenic |
CGAGAGCGAAGACGGAGGAG+CGG | 0.591558 | 8_2:+60730632 | None:intergenic |
ATGTTGGTGACGCGAACGGT+GGG | 0.593609 | 8_2:+60730709 | None:intergenic |
CAAGGACTCTGATATCTCCT+GGG | 0.594584 | 8_2:+60727550 | None:intergenic |
ATAGACTACTGTTTCTCAGA+TGG | 0.597479 | 8_2:-60728278 | Msa1259180:CDS |
CTTCACTGTAGACAGCATCA+AGG | 0.597815 | 8_2:+60727532 | None:intergenic |
CTTGCAAGTAAGGTTTGACA+TGG | 0.598486 | 8_2:-60725817 | Msa1259180:CDS |
AGTTTCCAGATTTCATGGAG+AGG | 0.599984 | 8_2:-60725908 | Msa1259180:CDS |
TTACCTATCAATGATGCTCA+AGG | 0.600272 | 8_2:-60727817 | Msa1259180:CDS |
TGGTTTCGAGGTATCGGAGA+AGG | 0.600522 | 8_2:+60730662 | None:intergenic |
CTCATCTTTAATTCCTAAGG+TGG | 0.601222 | 8_2:+60727998 | None:intergenic |
ATAATGTACCTTCAAGAGAA+GGG | 0.602102 | 8_2:+60730204 | None:intergenic |
TACCGAATTTGAAATGCTGA+AGG | 0.602636 | 8_2:+60728185 | None:intergenic |
GAGGATTACATTTGTCGAAG+AGG | 0.605467 | 8_2:-60728675 | Msa1259180:CDS |
TCCAAACGACACTTGACAAG+CGG | 0.605528 | 8_2:+60729079 | None:intergenic |
AAAGGGCACCATTGTTGATG+CGG | 0.606832 | 8_2:+60730425 | None:intergenic |
ACCGTGCGTCTTATTTGCAG+AGG | 0.612147 | 8_2:-60725617 | Msa1259180:CDS |
CTTATCTCTGTGACTTATGG+CGG | 0.614852 | 8_2:+60725719 | None:intergenic |
AATTCCTAAGGTGGACAACA+GGG | 0.615361 | 8_2:+60728007 | None:intergenic |
CCGTGTTCAGTTCGAGACGT+TGG | 0.616185 | 8_2:-60730566 | Msa1259180:CDS |
AAATGAGGTTGAGTGCCCAA+TGG | 0.616736 | 8_2:+60729228 | None:intergenic |
AAAGCTATTATGGGACAGGA+GGG | 0.619131 | 8_2:+60725361 | None:intergenic |
ACAGTAGTCTATACCATCAG+AGG | 0.619390 | 8_2:+60728289 | None:intergenic |
CACTCTCACTGCCCTAACCA+TGG | 0.619917 | 8_2:-60730752 | Msa1259180:exon |
CATATGCTTCAGACTTCATG+AGG | 0.619958 | 8_2:-60728694 | Msa1259180:CDS |
AAAAGCTATTATGGGACAGG+AGG | 0.621171 | 8_2:+60725360 | None:intergenic |
ATCAACTTATGGCATCTGCA+TGG | 0.623828 | 8_2:-60725488 | Msa1259180:CDS |
CCATTGTTGATGCGGTTACG+AGG | 0.625862 | 8_2:+60730433 | None:intergenic |
TGCCGAATATTTGTGCCCAA+GGG | 0.626409 | 8_2:-60727756 | Msa1259180:CDS |
GAAAACTTAAGGAACGTGGA+TGG | 0.627342 | 8_2:-60727633 | Msa1259180:CDS |
TTAGAACTGAAATATATAAG+CGG | 0.627448 | 8_2:-60728586 | Msa1259180:CDS |
AGGCCTAGGAATGATGTCAT+CGG | 0.630434 | 8_2:+60730462 | None:intergenic |
CCGTGCGTCTTATTTGCAGA+GGG | 0.630926 | 8_2:-60725616 | Msa1259180:CDS |
CCAACGTCTCGAACTGAACA+CGG | 0.635423 | 8_2:+60730566 | None:intergenic |
CTCATGCAATCAGGACCGAT+GGG | 0.635720 | 8_2:+60730391 | None:intergenic |
CACCTTAGGAATTAAAGATG+AGG | 0.636864 | 8_2:-60727997 | Msa1259180:CDS |
GATTTCGAGAGCGAAGACGG+AGG | 0.642616 | 8_2:+60730627 | None:intergenic |
GCAGATATCAGAGAATGGAT+GGG | 0.645198 | 8_2:-60728437 | Msa1259180:CDS |
ATTTGTGGTGATAGGTCACA+TGG | 0.648197 | 8_2:+60725463 | None:intergenic |
CTTCTATGGTGCAACGACTG+AGG | 0.648233 | 8_2:-60725667 | Msa1259180:CDS |
AGTTTGAATCAATTATGGCA+CGG | 0.648573 | 8_2:+60725838 | None:intergenic |
AGCATGAACCAAATGTGCGG+TGG | 0.651334 | 8_2:+60726055 | None:intergenic |
GAAAATCCAATGGACTACAC+AGG | 0.652832 | 8_2:-60726386 | Msa1259180:CDS |
ATGAGCCTCTAAAATATGTG+AGG | 0.655312 | 8_2:-60728889 | Msa1259180:CDS |
AATTAAATCCACATCTTGAG+GGG | 0.658323 | 8_2:+60728328 | None:intergenic |
TACTCCGCGAGATTTCCAGT+TGG | 0.659482 | 8_2:+60730591 | None:intergenic |
AGATGAAAACTTAAGGAACG+TGG | 0.661382 | 8_2:-60727637 | Msa1259180:CDS |
GGATATATCAGAAAATGGCG+GGG | 0.662600 | 8_2:-60729351 | Msa1259180:CDS |
ACGTATTATAGTAGGTAAGG+TGG | 0.663508 | 8_2:-60727598 | Msa1259180:CDS |
GCCATAAGTTGATATTCATG+CGG | 0.666800 | 8_2:+60725498 | None:intergenic |
GCTTGAAACCTCAAATCATG+TGG | 0.667801 | 8_2:-60728732 | Msa1259180:CDS |
AAGGATATATCAGAAAATGG+CGG | 0.669867 | 8_2:-60729353 | Msa1259180:CDS |
AGTATTTGTCCGCATAACTG+TGG | 0.671573 | 8_2:-60727682 | Msa1259180:CDS |
TATCTCCTGGGTGAAGACAA+GGG | 0.677342 | 8_2:+60727562 | None:intergenic |
GGACCATAAGGTGACACTAG+AGG | 0.679180 | 8_2:-60726345 | Msa1259180:intron |
GTCAGCATGAACCAAATGTG+CGG | 0.682533 | 8_2:+60726052 | None:intergenic |
TACACCAACTGGAAATCTCG+CGG | 0.683114 | 8_2:-60730595 | Msa1259180:CDS |
CGATACCTCGAAACCACCGT+TGG | 0.683116 | 8_2:-60730655 | Msa1259180:CDS |
ACCTTATGGTCCATTATACG+AGG | 0.683594 | 8_2:+60726356 | None:intergenic |
CTTTAAAGTTGAGAAGTCAG+TGG | 0.685540 | 8_2:+60729252 | None:intergenic |
CCTAGGAATGATGTCATCGG+AGG | 0.687166 | 8_2:+60730465 | None:intergenic |
TTCGGATGAAGGAATCACCA+TGG | 0.700240 | 8_2:+60730735 | None:intergenic |
CCTTCTCTGCTAGTCAACTG+CGG | 0.703161 | 8_2:-60728505 | Msa1259180:CDS |
AAGCTATTATGGGACAGGAG+GGG | 0.709108 | 8_2:+60725362 | None:intergenic |
AGTGTGCTTCAATCATGGGA+AGG | 0.715224 | 8_2:-60730370 | Msa1259180:CDS |
CTGCACATTTGGAAACACTG+CGG | 0.755401 | 8_2:+60728399 | None:intergenic |
AAGGCAATAAATCTTTGACG+GGG | 0.771887 | 8_2:+60728763 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAATAGAAAAAGAAAA+AGG | + | chr8_2:60728630-60728649 | None:intergenic | 10.0% |
!!! | CATCTAAATAATTTATTTTA+AGG | - | chr8_2:60730750-60730769 | Msa1259180:exon | 10.0% |
!!! | AATTCCTTTTGAAAATATTT+TGG | - | chr8_2:60725637-60725656 | Msa1259180:CDS | 15.0% |
!! | TATAAGTTGTTTATACAAAT+TGG | - | chr8_2:60726350-60726369 | Msa1259180:CDS | 15.0% |
!! | ATAAGTTGTTTATACAAATT+GGG | - | chr8_2:60726351-60726370 | Msa1259180:CDS | 15.0% |
!! | ATGATAATTTCTTAAAAGAA+TGG | + | chr8_2:60727780-60727799 | None:intergenic | 15.0% |
!!! | TCATAAAAGTTTAATTTGTT+AGG | + | chr8_2:60729132-60729151 | None:intergenic | 15.0% |
!! | TTCAGATTTATTTAGAAAAA+CGG | + | chr8_2:60729223-60729242 | None:intergenic | 15.0% |
!! | ACATTATTTGTTTATGTGTT+AGG | - | chr8_2:60725718-60725737 | Msa1259180:CDS | 20.0% |
!! | CATTATTTGTTTATGTGTTA+GGG | - | chr8_2:60725719-60725738 | Msa1259180:CDS | 20.0% |
!! | ATTTGATACCATGTTAAATA+TGG | + | chr8_2:60725988-60726007 | None:intergenic | 20.0% |
!! | TTTGATGTATAAATGTGTTT+GGG | - | chr8_2:60726110-60726129 | Msa1259180:CDS | 20.0% |
!! | AAATCACTCAAATTGAAATA+AGG | + | chr8_2:60726406-60726425 | None:intergenic | 20.0% |
!!! | ATTTCAATTTGAGTGATTTT+TGG | - | chr8_2:60726407-60726426 | Msa1259180:CDS | 20.0% |
!!! | TTTCAATTTGAGTGATTTTT+GGG | - | chr8_2:60726408-60726427 | Msa1259180:CDS | 20.0% |
!! | TAAATCAATAACAGAATGAA+AGG | + | chr8_2:60726460-60726479 | None:intergenic | 20.0% |
!! | GAAGAATAACAAAACATAAA+GGG | + | chr8_2:60726515-60726534 | None:intergenic | 20.0% |
!! | AGAAGAATAACAAAACATAA+AGG | + | chr8_2:60726516-60726535 | None:intergenic | 20.0% |
!!! | TTATATATTTCAGTTCTAAG+AGG | + | chr8_2:60727319-60727338 | None:intergenic | 20.0% |
!! | TTAGAACTGAAATATATAAG+CGG | - | chr8_2:60727320-60727339 | Msa1259180:intron | 20.0% |
!!! | TTCTTTTTCTCTCTTTTTAT+TGG | + | chr8_2:60728656-60728675 | None:intergenic | 20.0% |
!! | AATAAAAAGAGAGAAAAAGA+AGG | - | chr8_2:60728655-60728674 | Msa1259180:CDS | 20.0% |
!!! | TAAAAGTTTAATTTGTTAGG+TGG | + | chr8_2:60729129-60729148 | None:intergenic | 20.0% |
!!! | AATTAAACTTTTATGAGTGT+TGG | - | chr8_2:60729136-60729155 | Msa1259180:CDS | 20.0% |
!! | TCAGATTTATTTAGAAAAAC+GGG | + | chr8_2:60729222-60729241 | None:intergenic | 20.0% |
!! | AGTGTTTCTTTAAACAAAAT+TGG | - | chr8_2:60729730-60729749 | Msa1259180:intron | 20.0% |
!! | TCATGTAATCAACAAAAAAT+TGG | + | chr8_2:60729807-60729826 | None:intergenic | 20.0% |
!! | GTAAATGTAAAAGCTATTAT+GGG | + | chr8_2:60730557-60730576 | None:intergenic | 20.0% |
!! | TGTAAATGTAAAAGCTATTA+TGG | + | chr8_2:60730558-60730577 | None:intergenic | 20.0% |
!! | TAGTTTCCAAATATAAGTTA+TGG | - | chr8_2:60730606-60730625 | Msa1259180:CDS | 20.0% |
!! | CACTCCAAAATATTTTCAAA+AGG | + | chr8_2:60725644-60725663 | None:intergenic | 25.0% |
!!! | AAAATATTTTGGAGTGTGAT+GGG | - | chr8_2:60725648-60725667 | Msa1259180:CDS | 25.0% |
! | ACTTATTGTTGAAGTTGTAT+TGG | - | chr8_2:60725868-60725887 | Msa1259180:CDS | 25.0% |
! | ATCTAAGTCCATATTTAACA+TGG | - | chr8_2:60725977-60725996 | Msa1259180:CDS | 25.0% |
! | TTTAACATGGTATCAAATCT+AGG | - | chr8_2:60725990-60726009 | Msa1259180:CDS | 25.0% |
! | TAGGTTAAGAATTGCAATAT+GGG | - | chr8_2:60726009-60726028 | Msa1259180:CDS | 25.0% |
! | GTTTGATGTATAAATGTGTT+TGG | - | chr8_2:60726109-60726128 | Msa1259180:CDS | 25.0% |
! | CATAATTTCCCAAAAAAATG+AGG | + | chr8_2:60726696-60726715 | None:intergenic | 25.0% |
!!! | CTCATTTTTTTGGGAAATTA+TGG | - | chr8_2:60726694-60726713 | Msa1259180:intron | 25.0% |
! | TATGAACAAGAGAATTCAAT+TGG | + | chr8_2:60726880-60726899 | None:intergenic | 25.0% |
!! | AATCTCAATCACTTTGAAAA+AGG | - | chr8_2:60727279-60727298 | Msa1259180:intron | 25.0% |
!! | ATCTCAATCACTTTGAAAAA+GGG | - | chr8_2:60727280-60727299 | Msa1259180:intron | 25.0% |
! | TAGAACTGAAATATATAAGC+GGG | - | chr8_2:60727321-60727340 | Msa1259180:intron | 25.0% |
! | TATTGAATATTCTTCGAGAT+GGG | - | chr8_2:60727344-60727363 | Msa1259180:intron | 25.0% |
!!! | GATGTTTTGGAAAGTTTAAA+TGG | - | chr8_2:60728003-60728022 | Msa1259180:CDS | 25.0% |
! | GCAAAAACTAAGGAAAAATT+TGG | - | chr8_2:60728246-60728265 | Msa1259180:CDS | 25.0% |
! | AATTTGGAGATGAAAACTTA+AGG | - | chr8_2:60728262-60728281 | Msa1259180:CDS | 25.0% |
! | AGTGAAGAATTAGAAGAAAA+GGG | - | chr8_2:60728390-60728409 | Msa1259180:CDS | 25.0% |
! | AAACCATTATATACATACCT+AGG | + | chr8_2:60728450-60728469 | None:intergenic | 25.0% |
! | TTATTACAATCAAATGCAGT+TGG | + | chr8_2:60728479-60728498 | None:intergenic | 25.0% |
! | AAAAAGAAAAAGGAAGATAG+AGG | + | chr8_2:60728620-60728639 | None:intergenic | 25.0% |
! | TCACAAAAGTTGTTATCAAA+TGG | - | chr8_2:60728681-60728700 | Msa1259180:CDS | 25.0% |
! | TAAGAAATTGAGTTAAGTAG+AGG | + | chr8_2:60728880-60728899 | None:intergenic | 25.0% |
! | GTAAACAACATGTAACATAT+TGG | + | chr8_2:60728976-60728995 | None:intergenic | 25.0% |
! | CATATACCTTGTTAGATATT+AGG | - | chr8_2:60729100-60729119 | Msa1259180:CDS | 25.0% |
! | CAGATTTATTTAGAAAAACG+GGG | + | chr8_2:60729221-60729240 | None:intergenic | 25.0% |
! | ATTCTAACATAAAGTAGACT+AGG | - | chr8_2:60729264-60729283 | Msa1259180:CDS | 25.0% |
!!! | GGATTTATTTTTCATAAGCT+GGG | - | chr8_2:60729471-60729490 | Msa1259180:intron | 25.0% |
! | TTACATGATCAATGATACTT+TGG | - | chr8_2:60729819-60729838 | Msa1259180:intron | 25.0% |
! | TACATGATCAATGATACTTT+GGG | - | chr8_2:60729820-60729839 | Msa1259180:intron | 25.0% |
! | AAACCTATGTATATATCCAA+AGG | - | chr8_2:60730027-60730046 | Msa1259180:intron | 25.0% |
!! | TATATATCCAAAGGTGTATT+AGG | - | chr8_2:60730036-60730055 | Msa1259180:intron | 25.0% |
! | TTGCAAGTTTGAATCAATTA+TGG | + | chr8_2:60730076-60730095 | None:intergenic | 25.0% |
!! | AACTAAGCTACAATCTTTTT+AGG | + | chr8_2:60730591-60730610 | None:intergenic | 25.0% |
! | ATGTCTCCATAACTTATATT+TGG | + | chr8_2:60730615-60730634 | None:intergenic | 25.0% |
! | GAGATAATGATTGATTAAGA+GGG | + | chr8_2:60730729-60730748 | None:intergenic | 25.0% |
! | AGAGATAATGATTGATTAAG+AGG | + | chr8_2:60730730-60730749 | None:intergenic | 25.0% |
!! | TTAAAATGTTTAAAGAGTGC+CGG | + | chr8_2:60730792-60730811 | None:intergenic | 25.0% |
TGTTTCTTTCAACTTTGGTT+TGG | + | chr8_2:60725115-60725134 | None:intergenic | 30.0% | |
AAGTGTGTTTCTTTCAACTT+TGG | + | chr8_2:60725120-60725139 | None:intergenic | 30.0% | |
!!! | GAAAATATTTTGGAGTGTGA+TGG | - | chr8_2:60725647-60725666 | Msa1259180:CDS | 30.0% |
ATAATGTACCTTCAAGAGAA+GGG | + | chr8_2:60725705-60725724 | None:intergenic | 30.0% | |
AATAATGTACCTTCAAGAGA+AGG | + | chr8_2:60725706-60725725 | None:intergenic | 30.0% | |
!! | TGGACTTATTTTCAGCTTAT+TGG | - | chr8_2:60725753-60725772 | Msa1259180:CDS | 30.0% |
TTTGGATGTGTAAATGTGTT+TGG | - | chr8_2:60725918-60725937 | Msa1259180:CDS | 30.0% | |
TTGGATGTGTAAATGTGTTT+GGG | - | chr8_2:60725919-60725938 | Msa1259180:CDS | 30.0% | |
CTAGGTTAAGAATTGCAATA+TGG | - | chr8_2:60726008-60726027 | Msa1259180:CDS | 30.0% | |
AAGAATTGCAATATGGGAAT+TGG | - | chr8_2:60726015-60726034 | Msa1259180:CDS | 30.0% | |
TCAGATAAGTGTGTATGTAT+AGG | + | chr8_2:60726317-60726336 | None:intergenic | 30.0% | |
ATACACACTTATCTGATAAG+CGG | - | chr8_2:60726321-60726340 | Msa1259180:intron | 30.0% | |
AAGGATATATCAGAAAATGG+CGG | - | chr8_2:60726553-60726572 | Msa1259180:intron | 30.0% | |
ATACCTATCATCCTTAAACT+TGG | + | chr8_2:60726594-60726613 | None:intergenic | 30.0% | |
!!! | TGATAGGTATCGATTTTGTA+AGG | - | chr8_2:60726604-60726623 | Msa1259180:intron | 30.0% |
!!! | AGGAGAATTTTGAGTTTATG+TGG | - | chr8_2:60726624-60726643 | Msa1259180:intron | 30.0% |
!!! | GGAGAATTTTGAGTTTATGT+GGG | - | chr8_2:60726625-60726644 | Msa1259180:intron | 30.0% |
!! | TTCTCAACTTTAAAGTCCAT+TGG | - | chr8_2:60726662-60726681 | Msa1259180:intron | 30.0% |
!! | TCTCAACTTTAAAGTCCATT+GGG | - | chr8_2:60726663-60726682 | Msa1259180:intron | 30.0% |
! | TGAAGCAAGACTAATTTTCT+GGG | + | chr8_2:60726903-60726922 | None:intergenic | 30.0% |
GTATTGAATATTCTTCGAGA+TGG | - | chr8_2:60727343-60727362 | Msa1259180:intron | 30.0% | |
AATTAAATCCACATCTTGAG+GGG | + | chr8_2:60727581-60727600 | None:intergenic | 30.0% | |
GAATTAAATCCACATCTTGA+GGG | + | chr8_2:60727582-60727601 | None:intergenic | 30.0% | |
TTCCTTCAGCATTTCAAATT+CGG | - | chr8_2:60727719-60727738 | Msa1259180:CDS | 30.0% | |
TAAACTTTCCAAAACATCCA+AGG | + | chr8_2:60728001-60728020 | None:intergenic | 30.0% | |
! | TGCTTTTCAAATCAGATAAC+TGG | + | chr8_2:60728128-60728147 | None:intergenic | 30.0% |
CAGTGAAGAATTAGAAGAAA+AGG | - | chr8_2:60728389-60728408 | Msa1259180:CDS | 30.0% | |
TTACTCTTGACATTAATCCT+TGG | - | chr8_2:60728718-60728737 | Msa1259180:CDS | 30.0% | |
AGATGTGCTTTCTTTAACAA+CGG | - | chr8_2:60728743-60728762 | Msa1259180:CDS | 30.0% | |
TTTGGGGATGAAAGTTAAAA+GGG | - | chr8_2:60728807-60728826 | Msa1259180:CDS | 30.0% | |
CTAATTGATATGCAATGCAA+TGG | + | chr8_2:60728845-60728864 | None:intergenic | 30.0% | |
AATGATAACTGAGTAAGTAG+AGG | + | chr8_2:60728915-60728934 | None:intergenic | 30.0% | |
TCTACTTACTCAGTTATCAT+TGG | - | chr8_2:60728914-60728933 | Msa1259180:CDS | 30.0% | |
AAACAATGAATCTAAGGATC+TGG | + | chr8_2:60729041-60729060 | None:intergenic | 30.0% | |
AGATCCTTAGATTCATTGTT+TGG | - | chr8_2:60729040-60729059 | Msa1259180:CDS | 30.0% | |
ATTTATTTAGAAAAACGGGG+TGG | + | chr8_2:60729218-60729237 | None:intergenic | 30.0% | |
TATTGCTTTCTAATACTTGC+TGG | - | chr8_2:60729401-60729420 | Msa1259180:intron | 30.0% | |
ATTGCTTTCTAATACTTGCT+GGG | - | chr8_2:60729402-60729421 | Msa1259180:intron | 30.0% | |
!! | GGGATTTATTTTTCATAAGC+TGG | - | chr8_2:60729470-60729489 | Msa1259180:intron | 30.0% |
AAAAATGTATCTGCATGTGT+CGG | + | chr8_2:60729665-60729684 | None:intergenic | 30.0% | |
ACTAAAATAGACACAGACAT+CGG | + | chr8_2:60729713-60729732 | None:intergenic | 30.0% | |
ACACCTTTGGATATATACAT+AGG | + | chr8_2:60730033-60730052 | None:intergenic | 30.0% | |
AGTTTGAATCAATTATGGCA+CGG | + | chr8_2:60730071-60730090 | None:intergenic | 30.0% | |
TTGATTCAAACTTGCAAGTA+AGG | - | chr8_2:60730079-60730098 | Msa1259180:intron | 30.0% | |
ATACTTATCTCTGTGACTTA+TGG | + | chr8_2:60730193-60730212 | None:intergenic | 30.0% | |
TCGAATTCTAATCTCAGTAA+AGG | - | chr8_2:60730341-60730360 | Msa1259180:CDS | 30.0% | |
GTTGTAATATTTGTGGTGAT+AGG | + | chr8_2:60730454-60730473 | None:intergenic | 30.0% | |
AGCTTTCGTTGTAATATTTG+TGG | + | chr8_2:60730461-60730480 | None:intergenic | 30.0% | |
GTCATACTCATACTACAAAA+TGG | + | chr8_2:60730639-60730658 | None:intergenic | 30.0% | |
!! | GACATAACTTTTGATGACAT+TGG | - | chr8_2:60730686-60730705 | Msa1259180:CDS | 30.0% |
AAGGAGAAGTTTCTTGTTCT+CGG | + | chr8_2:60725393-60725412 | None:intergenic | 35.0% | |
! | TTTATGTGTTAGGGCTTGTT+TGG | - | chr8_2:60725728-60725747 | Msa1259180:CDS | 35.0% |
TATTGGAGTTCCAAATTGAC+CGG | - | chr8_2:60725885-60725904 | Msa1259180:CDS | 35.0% | |
AAAGTTAGCTCAAACGATGA+CGG | + | chr8_2:60725948-60725967 | None:intergenic | 35.0% | |
! | TCATCGTTTGAGCTAACTTT+TGG | - | chr8_2:60725948-60725967 | Msa1259180:CDS | 35.0% |
! | CATCGTTTGAGCTAACTTTT+GGG | - | chr8_2:60725949-60725968 | Msa1259180:CDS | 35.0% |
GCAATATGGGAATTGGATTA+AGG | - | chr8_2:60726022-60726041 | Msa1259180:CDS | 35.0% | |
!! | GATGGGTATTGAAGTTGTAT+TGG | - | chr8_2:60726060-60726079 | Msa1259180:CDS | 35.0% |
AAAGTTAGCTCAAAGGATGA+GGG | + | chr8_2:60726138-60726157 | None:intergenic | 35.0% | |
AAAAGTTAGCTCAAAGGATG+AGG | + | chr8_2:60726139-60726158 | None:intergenic | 35.0% | |
! | TCATCCTTTGAGCTAACTTT+TGG | - | chr8_2:60726138-60726157 | Msa1259180:intron | 35.0% |
! | CATCCTTTGAGCTAACTTTT+GGG | - | chr8_2:60726139-60726158 | Msa1259180:intron | 35.0% |
TATGCTATCATGTAGAGCTT+TGG | + | chr8_2:60726225-60726244 | None:intergenic | 35.0% | |
!!! | TGAGTGATTTTTGGGTTTTG+AGG | - | chr8_2:60726416-60726435 | Msa1259180:CDS | 35.0% |
!! | AAATCAGCTCTAGGTAACAA+TGG | + | chr8_2:60726492-60726511 | None:intergenic | 35.0% |
TATTCTTCTCAGCTGAGATA+TGG | - | chr8_2:60726527-60726546 | Msa1259180:intron | 35.0% | |
ATTCTTCTCAGCTGAGATAT+GGG | - | chr8_2:60726528-60726547 | Msa1259180:intron | 35.0% | |
GCCAAGGATATATCAGAAAA+TGG | - | chr8_2:60726550-60726569 | Msa1259180:intron | 35.0% | |
!! | GCCATTTTCTGATATATCCT+TGG | + | chr8_2:60726554-60726573 | None:intergenic | 35.0% |
AGGATATATCAGAAAATGGC+GGG | - | chr8_2:60726554-60726573 | Msa1259180:intron | 35.0% | |
TTAAACTTGGCAGCTACATT+TGG | + | chr8_2:60726581-60726600 | None:intergenic | 35.0% | |
AAATGTAGCTGCCAAGTTTA+AGG | - | chr8_2:60726580-60726599 | Msa1259180:intron | 35.0% | |
!! | CTTTAAAGTTGAGAAGTCAG+TGG | + | chr8_2:60726657-60726676 | None:intergenic | 35.0% |
!!! | GCACTCAACCTCATTTTTTT+GGG | - | chr8_2:60726685-60726704 | Msa1259180:intron | 35.0% |
TTCAAATTCTCTCTGTAGAG+CGG | + | chr8_2:60726755-60726774 | None:intergenic | 35.0% | |
GAATTTGAAGGATCTAAGTC+TGG | - | chr8_2:60726766-60726785 | Msa1259180:intron | 35.0% | |
GATTCCAAGTTACCTTATGA+GGG | - | chr8_2:60726848-60726867 | Msa1259180:intron | 35.0% | |
AATTGGAAAAGACCCTCATA+AGG | + | chr8_2:60726863-60726882 | None:intergenic | 35.0% | |
! | CTGAAGCAAGACTAATTTTC+TGG | + | chr8_2:60726904-60726923 | None:intergenic | 35.0% |
!! | TGATGAGTTGATTGACTTGT+TGG | - | chr8_2:60726928-60726947 | Msa1259180:intron | 35.0% |
!! | TTTTAGAGGCTCATAACAAG+TGG | + | chr8_2:60727011-60727030 | None:intergenic | 35.0% |
!! | ATGAGCCTCTAAAATATGTG+AGG | - | chr8_2:60727017-60727036 | Msa1259180:intron | 35.0% |
!! | TGAGTCCTCACATATTTTAG+AGG | + | chr8_2:60727025-60727044 | None:intergenic | 35.0% |
AAGGCAATAAATCTTTGACG+GGG | + | chr8_2:60727146-60727165 | None:intergenic | 35.0% | |
CAAGGCAATAAATCTTTGAC+GGG | + | chr8_2:60727147-60727166 | None:intergenic | 35.0% | |
CCAAGGCAATAAATCTTTGA+CGG | + | chr8_2:60727148-60727167 | None:intergenic | 35.0% | |
! | ATGATTTGAGGTTTCAAGCT+CGG | + | chr8_2:60727173-60727192 | None:intergenic | 35.0% |
ATGCTTTACCACATGATTTG+AGG | + | chr8_2:60727185-60727204 | None:intergenic | 35.0% | |
!! | TCATGTGGTAAAGCATTTTG+CGG | - | chr8_2:60727189-60727208 | Msa1259180:intron | 35.0% |
TTACATTTGTCGAAGAGGAT+TGG | - | chr8_2:60727236-60727255 | Msa1259180:intron | 35.0% | |
GTGATTGAGATTGCATTGTT+TGG | + | chr8_2:60727271-60727290 | None:intergenic | 35.0% | |
TGAAAAAGGGAATGTTCTCA+AGG | - | chr8_2:60727293-60727312 | Msa1259180:intron | 35.0% | |
GGAATTAAATCCACATCTTG+AGG | + | chr8_2:60727583-60727602 | None:intergenic | 35.0% | |
TCAGAGGTGATTTCAATATC+TGG | + | chr8_2:60727604-60727623 | None:intergenic | 35.0% | |
GATATTGAAATCACCTCTGA+TGG | - | chr8_2:60727604-60727623 | Msa1259180:CDS | 35.0% | |
! | ATAGACTACTGTTTCTCAGA+TGG | - | chr8_2:60727628-60727647 | Msa1259180:CDS | 35.0% |
! | TACTGTTTCTCAGATGGTAT+TGG | - | chr8_2:60727634-60727653 | Msa1259180:CDS | 35.0% |
! | AAATTTCACAGTCTTTTGCC+AGG | - | chr8_2:60727659-60727678 | Msa1259180:CDS | 35.0% |
! | TACCGAATTTGAAATGCTGA+AGG | + | chr8_2:60727724-60727743 | None:intergenic | 35.0% |
TCAGCATTTCAAATTCGGTA+TGG | - | chr8_2:60727724-60727743 | Msa1259180:CDS | 35.0% | |
!! | ATTCGGTATGGTGGATATAA+AGG | - | chr8_2:60727736-60727755 | Msa1259180:CDS | 35.0% |
CTCATCTTTAATTCCTAAGG+TGG | + | chr8_2:60727911-60727930 | None:intergenic | 35.0% | |
CACCTTAGGAATTAAAGATG+AGG | - | chr8_2:60727909-60727928 | Msa1259180:CDS | 35.0% | |
!! | AATTAAAGATGAGGCGCTTT+TGG | - | chr8_2:60727918-60727937 | Msa1259180:CDS | 35.0% |
! | AGGAAAGATGTTGACTGATA+AGG | - | chr8_2:60727969-60727988 | Msa1259180:CDS | 35.0% |
!! | CATAGGTTTTATGAGCCAAA+CGG | - | chr8_2:60728060-60728079 | Msa1259180:CDS | 35.0% |
TTGAGCATCATTGATAGGTA+AGG | + | chr8_2:60728090-60728109 | None:intergenic | 35.0% | |
TTACCTATCAATGATGCTCA+AGG | - | chr8_2:60728089-60728108 | Msa1259180:CDS | 35.0% | |
! | TAGTTTTTGCCACAGTTATG+CGG | + | chr8_2:60728236-60728255 | None:intergenic | 35.0% |
CATAACTGTGGCAAAAACTA+AGG | - | chr8_2:60728236-60728255 | Msa1259180:CDS | 35.0% | |
AGATGAAAACTTAAGGAACG+TGG | - | chr8_2:60728269-60728288 | Msa1259180:CDS | 35.0% | |
GATAGCACACGTATTATAGT+AGG | - | chr8_2:60728300-60728319 | Msa1259180:CDS | 35.0% | |
CACACGTATTATAGTAGGTA+AGG | - | chr8_2:60728305-60728324 | Msa1259180:CDS | 35.0% | |
ACGTATTATAGTAGGTAAGG+TGG | - | chr8_2:60728308-60728327 | Msa1259180:CDS | 35.0% | |
AATTAGAAGAAAAGGGCTTG+AGG | - | chr8_2:60728397-60728416 | Msa1259180:CDS | 35.0% | |
ATTAGAAGAAAAGGGCTTGA+GGG | - | chr8_2:60728398-60728417 | Msa1259180:CDS | 35.0% | |
TGCCTTGTATTTCCACAAAA+AGG | - | chr8_2:60728423-60728442 | Msa1259180:CDS | 35.0% | |
! | GTCCTTTTTGTGGAAATACA+AGG | + | chr8_2:60728428-60728447 | None:intergenic | 35.0% |
TATTTCCACAAAAAGGACCT+AGG | - | chr8_2:60728430-60728449 | Msa1259180:CDS | 35.0% | |
GGACCTAGGTATGTATATAA+TGG | - | chr8_2:60728444-60728463 | Msa1259180:CDS | 35.0% | |
! | AAACATCTTGTGACGACTTT+TGG | - | chr8_2:60728558-60728577 | Msa1259180:CDS | 35.0% |
ATCATGCACCAACAAAAGAA+GGG | - | chr8_2:60728776-60728795 | Msa1259180:CDS | 35.0% | |
! | CTTTGGGGATGAAAGTTAAA+AGG | - | chr8_2:60728806-60728825 | Msa1259180:CDS | 35.0% |
TGGCTATGCAAAACAATCTT+AGG | - | chr8_2:60728934-60728953 | Msa1259180:CDS | 35.0% | |
GGCTATGCAAAACAATCTTA+GGG | - | chr8_2:60728935-60728954 | Msa1259180:CDS | 35.0% | |
GCTATGCAAAACAATCTTAG+GGG | - | chr8_2:60728936-60728955 | Msa1259180:CDS | 35.0% | |
ATGAGGACAGCAAAACTTAA+GGG | + | chr8_2:60729010-60729029 | None:intergenic | 35.0% | |
TCCTTAGATTCATTGTTTGG+TGG | - | chr8_2:60729043-60729062 | Msa1259180:CDS | 35.0% | |
TCCACCAAACAATGAATCTA+AGG | + | chr8_2:60729047-60729066 | None:intergenic | 35.0% | |
TGGAAGCCTAATATCTAACA+AGG | + | chr8_2:60729109-60729128 | None:intergenic | 35.0% | |
!!! | ACTTTTATGAGTGTTGGTAC+TGG | - | chr8_2:60729142-60729161 | Msa1259180:CDS | 35.0% |
! | TTGGATTTTCAGTTTGAGCT+GGG | + | chr8_2:60729510-60729529 | None:intergenic | 35.0% |
! | ATTGGATTTTCAGTTTGAGC+TGG | + | chr8_2:60729511-60729530 | None:intergenic | 35.0% |
AGCTCAAACTGAAAATCCAA+TGG | - | chr8_2:60729510-60729529 | Msa1259180:intron | 35.0% | |
CAAGTACAAAGTATGCAACT+TGG | + | chr8_2:60729598-60729617 | None:intergenic | 35.0% | |
GCAACAGCAACAAACATATA+AGG | + | chr8_2:60729772-60729791 | None:intergenic | 35.0% | |
TCTCTTGGTTTCAAAGATCT+TGG | + | chr8_2:60729979-60729998 | None:intergenic | 35.0% | |
ATGAAATCTGGAAACTCTCT+TGG | + | chr8_2:60729994-60730013 | None:intergenic | 35.0% | |
AAGAGAGTTTCCAGATTTCA+TGG | - | chr8_2:60729993-60730012 | Msa1259180:intron | 35.0% | |
! | GAGTTTTCCTAATACACCTT+TGG | + | chr8_2:60730046-60730065 | None:intergenic | 35.0% |
ATCTCTTTGATGAGCTTCTA+TGG | - | chr8_2:60730225-60730244 | Msa1259180:CDS | 35.0% | |
!! | GCCATAAGTTGATATTCATG+CGG | + | chr8_2:60730411-60730430 | None:intergenic | 35.0% |
CCATGGAAAGCTTAAAAAAG+TGG | + | chr8_2:60730484-60730503 | None:intergenic | 35.0% | |
!!! | CCACTTTTTTAAGCTTTCCA+TGG | - | chr8_2:60730481-60730500 | Msa1259180:CDS | 35.0% |
! | TTAAGCTTTCCATGGATTGT+CGG | - | chr8_2:60730489-60730508 | Msa1259180:CDS | 35.0% |
TGTAAAAGCTATTATGGGAC+AGG | + | chr8_2:60730552-60730571 | None:intergenic | 35.0% | |
GAGTATGACATGTTCATCTA+CGG | - | chr8_2:60730650-60730669 | Msa1259180:CDS | 35.0% | |
AGTATGACATGTTCATCTAC+GGG | - | chr8_2:60730651-60730670 | Msa1259180:CDS | 35.0% | |
TGAAGGAATCACCATGGTTA+GGG | + | chr8_2:60725168-60725187 | None:intergenic | 40.0% | |
ATGAAGGAATCACCATGGTT+AGG | + | chr8_2:60725169-60725188 | None:intergenic | 40.0% | |
GATGGGAAAACCAGCATAAA+GGG | + | chr8_2:60725501-60725520 | None:intergenic | 40.0% | |
!!! | CTTTATGCTGGTTTTCCCAT+CGG | - | chr8_2:60725500-60725519 | Msa1259180:CDS | 40.0% |
CATGAGTGTGCTTCAATCAT+GGG | - | chr8_2:60725532-60725551 | Msa1259180:CDS | 40.0% | |
AAATCAAGTCTCTGCCTTTC+AGG | + | chr8_2:60725581-60725600 | None:intergenic | 40.0% | |
AAAGGCAGAGACTTGATTTC+TGG | - | chr8_2:60725582-60725601 | Msa1259180:CDS | 40.0% | |
AAGGCAGAGACTTGATTTCT+GGG | - | chr8_2:60725583-60725602 | Msa1259180:CDS | 40.0% | |
! | GATGGGTATTGTTCTGATGA+AGG | - | chr8_2:60725665-60725684 | Msa1259180:CDS | 40.0% |
AAGTTAGCTCAAACGATGAC+GGG | + | chr8_2:60725947-60725966 | None:intergenic | 40.0% | |
CATCCCAAAAGTTAGCTCAA+AGG | + | chr8_2:60725955-60725974 | None:intergenic | 40.0% | |
CATAAAGGGAAATCAGCTCT+AGG | + | chr8_2:60726501-60726520 | None:intergenic | 40.0% | |
GGATATATCAGAAAATGGCG+GGG | - | chr8_2:60726555-60726574 | Msa1259180:intron | 40.0% | |
CTGCCAAGTTTAAGGATGAT+AGG | - | chr8_2:60726588-60726607 | Msa1259180:intron | 40.0% | |
!!! | GGCACTCAACCTCATTTTTT+TGG | - | chr8_2:60726684-60726703 | Msa1259180:intron | 40.0% |
TCAAATTCTCTCTGTAGAGC+GGG | + | chr8_2:60726754-60726773 | None:intergenic | 40.0% | |
GCTCTACAGAGAGAATTTGA+AGG | - | chr8_2:60726754-60726773 | Msa1259180:intron | 40.0% | |
AAGGATCTAAGTCTGGAAGA+TGG | - | chr8_2:60726773-60726792 | Msa1259180:intron | 40.0% | |
GGATTCCAAGTTACCTTATG+AGG | - | chr8_2:60726847-60726866 | Msa1259180:intron | 40.0% | |
AAGACCCTCATAAGGTAACT+TGG | + | chr8_2:60726855-60726874 | None:intergenic | 40.0% | |
!! | GATTGACTTGTTGGTAAGCT+TGG | - | chr8_2:60726937-60726956 | Msa1259180:intron | 40.0% |
AAGCTTGGATGCAGAAACTA+AGG | - | chr8_2:60726952-60726971 | Msa1259180:intron | 40.0% | |
TTCTCCCATCGCAACAAAAA+AGG | - | chr8_2:60727077-60727096 | Msa1259180:intron | 40.0% | |
!!! | CCAACCTTTTTTGTTGCGAT+GGG | + | chr8_2:60727084-60727103 | None:intergenic | 40.0% |
!!! | ACCAACCTTTTTTGTTGCGA+TGG | + | chr8_2:60727085-60727104 | None:intergenic | 40.0% |
ATCGCAACAAAAAAGGTTGG+TGG | - | chr8_2:60727084-60727103 | Msa1259180:intron | 40.0% | |
AATCTTTGACGGGGTAATCA+AGG | + | chr8_2:60727137-60727156 | None:intergenic | 40.0% | |
CCGTCAAAGATTTATTGCCT+TGG | - | chr8_2:60727145-60727164 | Msa1259180:intron | 40.0% | |
! | TGATTTGAGGTTTCAAGCTC+GGG | + | chr8_2:60727172-60727191 | None:intergenic | 40.0% |
GCTTGAAACCTCAAATCATG+TGG | - | chr8_2:60727174-60727193 | Msa1259180:intron | 40.0% | |
CATATGCTTCAGACTTCATG+AGG | - | chr8_2:60727212-60727231 | Msa1259180:intron | 40.0% | |
GAGGATTACATTTGTCGAAG+AGG | - | chr8_2:60727231-60727250 | Msa1259180:intron | 40.0% | |
AACTGCGGTCAAATTCTGTT+TGG | - | chr8_2:60727416-60727435 | Msa1259180:intron | 40.0% | |
AAGCAGCAGATATCAGAGAA+TGG | - | chr8_2:60727464-60727483 | Msa1259180:intron | 40.0% | |
AGCAGATATCAGAGAATGGA+TGG | - | chr8_2:60727468-60727487 | Msa1259180:intron | 40.0% | |
GCAGATATCAGAGAATGGAT+GGG | - | chr8_2:60727469-60727488 | Msa1259180:intron | 40.0% | |
TTCCAAATGTGCAGCAAGAA+TGG | - | chr8_2:60727516-60727535 | Msa1259180:CDS | 40.0% | |
TCCAAATGTGCAGCAAGAAT+GGG | - | chr8_2:60727517-60727536 | Msa1259180:CDS | 40.0% | |
!! | GTCCAGGCAAACTTTTGAAA+TGG | - | chr8_2:60727555-60727574 | Msa1259180:CDS | 40.0% |
ACAGTAGTCTATACCATCAG+AGG | + | chr8_2:60727620-60727639 | None:intergenic | 40.0% | |
GCATTTCAAATTCGGTATGG+TGG | - | chr8_2:60727727-60727746 | Msa1259180:CDS | 40.0% | |
!! | GACGCAAAGCATTCTGTTTT+TGG | + | chr8_2:60727830-60727849 | None:intergenic | 40.0% |
GAATGCTTTGCGTCACTAAA+TGG | - | chr8_2:60727836-60727855 | Msa1259180:CDS | 40.0% | |
ATCTCTCGATTGAGAAAGCA+CGG | + | chr8_2:60727874-60727893 | None:intergenic | 40.0% | |
AATTCCTAAGGTGGACAACA+GGG | + | chr8_2:60727902-60727921 | None:intergenic | 40.0% | |
TAATTCCTAAGGTGGACAAC+AGG | + | chr8_2:60727903-60727922 | None:intergenic | 40.0% | |
CGCCTCATCTTTAATTCCTA+AGG | + | chr8_2:60727914-60727933 | None:intergenic | 40.0% | |
TTCTAGTCAAGATGCTGCAT+AGG | - | chr8_2:60728043-60728062 | Msa1259180:CDS | 40.0% | |
!! | GAGACTGGTCTATTGAACTA+TGG | - | chr8_2:60728198-60728217 | Msa1259180:CDS | 40.0% |
CAGTTATGCGGACAAATACT+TGG | + | chr8_2:60728224-60728243 | None:intergenic | 40.0% | |
AGTATTTGTCCGCATAACTG+TGG | - | chr8_2:60728224-60728243 | Msa1259180:CDS | 40.0% | |
GAAAACTTAAGGAACGTGGA+TGG | - | chr8_2:60728273-60728292 | Msa1259180:CDS | 40.0% | |
! | ACATACCTAGGTCCTTTTTG+TGG | + | chr8_2:60728438-60728457 | None:intergenic | 40.0% |
! | AAAGAAAGCACATCTGACCA+AGG | + | chr8_2:60728738-60728757 | None:intergenic | 40.0% |
CATCATGCACCAACAAAAGA+AGG | - | chr8_2:60728775-60728794 | Msa1259180:CDS | 40.0% | |
TCATGCACCAACAAAAGAAG+GGG | - | chr8_2:60728777-60728796 | Msa1259180:CDS | 40.0% | |
! | AAAAGAAGGGGGCATATCTT+TGG | - | chr8_2:60728789-60728808 | Msa1259180:CDS | 40.0% |
! | AAAGAAGGGGGCATATCTTT+GGG | - | chr8_2:60728790-60728809 | Msa1259180:CDS | 40.0% |
AGTTAAAAGGGCCATTAGCT+AGG | - | chr8_2:60728819-60728838 | Msa1259180:CDS | 40.0% | |
CATGAGGACAGCAAAACTTA+AGG | + | chr8_2:60729011-60729030 | None:intergenic | 40.0% | |
TTAGAAAAACGGGGTGGATA+AGG | + | chr8_2:60729212-60729231 | None:intergenic | 40.0% | |
GTAGACTAGGAAAACACAAC+AGG | - | chr8_2:60729277-60729296 | Msa1259180:CDS | 40.0% | |
ACACAACAGGTTATTGCATG+AGG | - | chr8_2:60729290-60729309 | Msa1259180:CDS | 40.0% | |
CACAACAGGTTATTGCATGA+GGG | - | chr8_2:60729291-60729310 | Msa1259180:CDS | 40.0% | |
ACAACAGGTTATTGCATGAG+GGG | - | chr8_2:60729292-60729311 | Msa1259180:CDS | 40.0% | |
!! | GAAAATCCAATGGACTACAC+AGG | - | chr8_2:60729520-60729539 | Msa1259180:intron | 40.0% |
ACCTTATGGTCCATTATACG+AGG | + | chr8_2:60729553-60729572 | None:intergenic | 40.0% | |
TTACCTCTAGTGTCACCTTA+TGG | + | chr8_2:60729567-60729586 | None:intergenic | 40.0% | |
AAAATAGACACAGACATCGG+TGG | + | chr8_2:60729710-60729729 | None:intergenic | 40.0% | |
! | TATGTTTGTTGCTGTTGCGT+AGG | - | chr8_2:60729774-60729793 | Msa1259180:intron | 40.0% |
! | CTCCAGACATTTTCTACTCT+TGG | + | chr8_2:60729896-60729915 | None:intergenic | 40.0% |
! | GAGTAGAAAATGTCTGGAGT+TGG | - | chr8_2:60729897-60729916 | Msa1259180:intron | 40.0% |
CTTTGCAAAATCAACTGCCA+TGG | + | chr8_2:60729935-60729954 | None:intergenic | 40.0% | |
!! | GCAGTTGATTTTGCAAAGAC+TGG | - | chr8_2:60729937-60729956 | Msa1259180:intron | 40.0% |
AAAGATCTTGGCATTTCTGC+AGG | + | chr8_2:60729967-60729986 | None:intergenic | 40.0% | |
AGTTTCCAGATTTCATGGAG+AGG | - | chr8_2:60729998-60730017 | Msa1259180:intron | 40.0% | |
TCAAACCTCTCCATGAAATC+TGG | + | chr8_2:60730006-60730025 | None:intergenic | 40.0% | |
CTGGTGATCATATGCTTCTT+TGG | + | chr8_2:60730133-60730152 | None:intergenic | 40.0% | |
CAAAACCATCAACTTCAAGC+TGG | + | chr8_2:60730152-60730171 | None:intergenic | 40.0% | |
!!! | GCTTGAAGTTGATGGTTTTG+AGG | - | chr8_2:60730152-60730171 | Msa1259180:intron | 40.0% |
CTTATCTCTGTGACTTATGG+CGG | + | chr8_2:60730190-60730209 | None:intergenic | 40.0% | |
ACTGAGGATGAAATGCTAAC+TGG | - | chr8_2:60730255-60730274 | Msa1259180:CDS | 40.0% | |
CTTATTTGCAGAGGGATAAC+AGG | - | chr8_2:60730298-60730317 | Msa1259180:CDS | 40.0% | |
TTCAGCTGGAAGCTAAAGAA+TGG | - | chr8_2:60730367-60730386 | Msa1259180:CDS | 40.0% | |
GCCGCATGAATATCAACTTA+TGG | - | chr8_2:60730407-60730426 | Msa1259180:CDS | 40.0% | |
ATCAACTTATGGCATCTGCA+TGG | - | chr8_2:60730418-60730437 | Msa1259180:CDS | 40.0% | |
ATTTGTGGTGATAGGTCACA+TGG | + | chr8_2:60730446-60730465 | None:intergenic | 40.0% | |
AAAATGTCACCGACAATCCA+TGG | + | chr8_2:60730501-60730520 | None:intergenic | 40.0% | |
AAAGCTATTATGGGACAGGA+GGG | + | chr8_2:60730548-60730567 | None:intergenic | 40.0% | |
AAAAGCTATTATGGGACAGG+AGG | + | chr8_2:60730549-60730568 | None:intergenic | 40.0% | |
TTCGGATGAAGGAATCACCA+TGG | + | chr8_2:60725174-60725193 | None:intergenic | 45.0% | |
GAAGATTTCGAGAGCGAAGA+CGG | + | chr8_2:60725285-60725304 | None:intergenic | 45.0% | |
TACACCAACTGGAAATCTCG+CGG | - | chr8_2:60725311-60725330 | Msa1259180:three_prime_UTR | 45.0% | |
AGGCCTAGGAATGATGTCAT+CGG | + | chr8_2:60725447-60725466 | None:intergenic | 45.0% | |
!! | AAAGGGCACCATTGTTGATG+CGG | + | chr8_2:60725484-60725503 | None:intergenic | 45.0% |
AACAATGGTGCCCTTTATGC+TGG | - | chr8_2:60725488-60725507 | Msa1259180:CDS | 45.0% | |
CGATGGGAAAACCAGCATAA+AGG | + | chr8_2:60725502-60725521 | None:intergenic | 45.0% | |
TGAAGCACACTCATGCAATC+AGG | + | chr8_2:60725527-60725546 | None:intergenic | 45.0% | |
GCATGAGTGTGCTTCAATCA+TGG | - | chr8_2:60725531-60725550 | Msa1259180:CDS | 45.0% | |
AGTGTGCTTCAATCATGGGA+AGG | - | chr8_2:60725536-60725555 | Msa1259180:CDS | 45.0% | |
! | ACTTGATTTCTGGGTCACTC+AGG | - | chr8_2:60725592-60725611 | Msa1259180:CDS | 45.0% |
! | CTTGATTTCTGGGTCACTCA+GGG | - | chr8_2:60725593-60725612 | Msa1259180:CDS | 45.0% |
! | GTGTTAGGGCTTGTTTGGAT+TGG | - | chr8_2:60725733-60725752 | Msa1259180:CDS | 45.0% |
!! | TCCAAATTGACCGGCTTTTC+AGG | - | chr8_2:60725894-60725913 | Msa1259180:CDS | 45.0% |
ACATCCAAAGCCTGAAAAGC+CGG | + | chr8_2:60725907-60725926 | None:intergenic | 45.0% | |
ATTAAGGACTCACGTCGTTG+AGG | - | chr8_2:60726038-60726057 | Msa1259180:CDS | 45.0% | |
AAATGAGGTTGAGTGCCCAA+TGG | + | chr8_2:60726681-60726700 | None:intergenic | 45.0% | |
ACAAGCGGAACTGTTTCAGT+TGG | + | chr8_2:60726815-60726834 | None:intergenic | 45.0% | |
TCCAAACGACACTTGACAAG+CGG | + | chr8_2:60726830-60726849 | None:intergenic | 45.0% | |
CCCATCGCAACAAAAAAGGT+TGG | - | chr8_2:60727081-60727100 | Msa1259180:intron | 45.0% | |
CTTCGAGATGGGATTCTAGT+TGG | - | chr8_2:60727355-60727374 | Msa1259180:intron | 45.0% | |
CTGCACATTTGGAAACACTG+CGG | + | chr8_2:60727510-60727529 | None:intergenic | 45.0% | |
ACCCATTCTTGCTGCACATT+TGG | + | chr8_2:60727521-60727540 | None:intergenic | 45.0% | |
GGCCATTTCAAAAGTTTGCC+TGG | + | chr8_2:60727560-60727579 | None:intergenic | 45.0% | |
! | TAGCTTTTCTGCAAGTTGCC+TGG | + | chr8_2:60727680-60727699 | None:intergenic | 45.0% |
ATATCCCTGTTGTCCACCTT+AGG | - | chr8_2:60727895-60727914 | Msa1259180:CDS | 45.0% | |
GAGCCTTGAGCATCATTGAT+AGG | + | chr8_2:60728095-60728114 | None:intergenic | 45.0% | |
ATGCCGAATATTTGTGCCCA+AGG | - | chr8_2:60728149-60728168 | Msa1259180:CDS | 45.0% | |
TGCCGAATATTTGTGCCCAA+GGG | - | chr8_2:60728150-60728169 | Msa1259180:CDS | 45.0% | |
AAAAACCCTTGTCTTCACCC+AGG | - | chr8_2:60728339-60728358 | Msa1259180:CDS | 45.0% | |
TATCTCCTGGGTGAAGACAA+GGG | + | chr8_2:60728347-60728366 | None:intergenic | 45.0% | |
ATATCTCCTGGGTGAAGACA+AGG | + | chr8_2:60728348-60728367 | None:intergenic | 45.0% | |
CAAGGACTCTGATATCTCCT+GGG | + | chr8_2:60728359-60728378 | None:intergenic | 45.0% | |
TCAAGGACTCTGATATCTCC+TGG | + | chr8_2:60728360-60728379 | None:intergenic | 45.0% | |
CTTCACTGTAGACAGCATCA+AGG | + | chr8_2:60728377-60728396 | None:intergenic | 45.0% | |
CATGCACCAACAAAAGAAGG+GGG | - | chr8_2:60728778-60728797 | Msa1259180:CDS | 45.0% | |
! | GATATGCCCCCTTCTTTTGT+TGG | + | chr8_2:60728787-60728806 | None:intergenic | 45.0% |
! | AAGAAGGGGGCATATCTTTG+GGG | - | chr8_2:60728791-60728810 | Msa1259180:CDS | 45.0% |
CAATGCAATGGCCTAGCTAA+TGG | + | chr8_2:60728833-60728852 | None:intergenic | 45.0% | |
AGGATCTGGTTATGTGCATG+AGG | + | chr8_2:60729027-60729046 | None:intergenic | 45.0% | |
! | CTAATACTTGCTGGGTCTAC+AGG | - | chr8_2:60729410-60729429 | Msa1259180:intron | 45.0% |
CTTCTTCCTGTGTAGTCCAT+TGG | + | chr8_2:60729529-60729548 | None:intergenic | 45.0% | |
!! | CAATGGACTACACAGGAAGA+AGG | - | chr8_2:60729527-60729546 | Msa1259180:intron | 45.0% |
AGGAAGAAGGCCTCGTATAA+TGG | - | chr8_2:60729540-60729559 | Msa1259180:intron | 45.0% | |
!! | GCCTCGTATAATGGACCATA+AGG | - | chr8_2:60729549-60729568 | Msa1259180:intron | 45.0% |
GTCAGCATGAACCAAATGTG+CGG | + | chr8_2:60729857-60729876 | None:intergenic | 45.0% | |
!! | TCTTGGCCTTATCGTGTTCA+CGG | + | chr8_2:60729879-60729898 | None:intergenic | 45.0% |
GGCCAAGAGTAGAAAATGTC+TGG | - | chr8_2:60729891-60729910 | Msa1259180:intron | 45.0% | |
GATCACCAGCTTGAAGTTGA+TGG | - | chr8_2:60730144-60730163 | Msa1259180:intron | 45.0% | |
CAGAGGGATAACAGGAGATA+CGG | - | chr8_2:60730306-60730325 | Msa1259180:CDS | 45.0% | |
CAGGAGATACGGAGATATGA+AGG | - | chr8_2:60730317-60730336 | Msa1259180:CDS | 45.0% | |
CTCAGTAAAGGATCTTCAGC+TGG | - | chr8_2:60730353-60730372 | Msa1259180:CDS | 45.0% | |
AAGCTATTATGGGACAGGAG+GGG | + | chr8_2:60730547-60730566 | None:intergenic | 45.0% | |
TTCATCTACGGGTAGCACTT+GGG | - | chr8_2:60730662-60730681 | Msa1259180:CDS | 45.0% | |
!!! | ATCTAAATAATTTATTTTAA+GGG | - | chr8_2:60730751-60730770 | Msa1259180:exon | 5.0% |
!! | TGGTTTCGAGGTATCGGAGA+AGG | + | chr8_2:60725247-60725266 | None:intergenic | 50.0% |
CAACGGTGGTTTCGAGGTAT+CGG | + | chr8_2:60725253-60725272 | None:intergenic | 50.0% | |
TCTTCAGCGACTACACCAAC+TGG | - | chr8_2:60725300-60725319 | Msa1259180:three_prime_UTR | 50.0% | |
TACTCCGCGAGATTTCCAGT+TGG | + | chr8_2:60725318-60725337 | None:intergenic | 50.0% | |
AACTGGAAATCTCGCGGAGT+AGG | - | chr8_2:60725317-60725336 | Msa1259180:three_prime_UTR | 50.0% | |
CCAACGTCTCGAACTGAACA+CGG | + | chr8_2:60725343-60725362 | None:intergenic | 50.0% | |
CTTGTTCTCGGCGAGAGTTA+GGG | + | chr8_2:60725381-60725400 | None:intergenic | 50.0% | |
TCTTGTTCTCGGCGAGAGTT+AGG | + | chr8_2:60725382-60725401 | None:intergenic | 50.0% | |
GACAGAGGAAATGGGAGCTA+AGG | + | chr8_2:60725412-60725431 | None:intergenic | 50.0% | |
! | AGCGTCGAGACAGAGGAAAT+GGG | + | chr8_2:60725420-60725439 | None:intergenic | 50.0% |
!! | AAGCGTCGAGACAGAGGAAA+TGG | + | chr8_2:60725421-60725440 | None:intergenic | 50.0% |
CCTAGGAATGATGTCATCGG+AGG | + | chr8_2:60725444-60725463 | None:intergenic | 50.0% | |
CCTCCGATGACATCATTCCT+AGG | - | chr8_2:60725441-60725460 | Msa1259180:CDS | 50.0% | |
CCATTGTTGATGCGGTTACG+AGG | + | chr8_2:60725476-60725495 | None:intergenic | 50.0% | |
CCTCGTAACCGCATCAACAA+TGG | - | chr8_2:60725473-60725492 | Msa1259180:CDS | 50.0% | |
CTCATGCAATCAGGACCGAT+GGG | + | chr8_2:60725518-60725537 | None:intergenic | 50.0% | |
ACTCATGCAATCAGGACCGA+TGG | + | chr8_2:60725519-60725538 | None:intergenic | 50.0% | |
!! | CAATCATGGGAAGGTGTTCG+AGG | - | chr8_2:60725545-60725564 | Msa1259180:CDS | 50.0% |
!! | ATGGGAAGGTGTTCGAGGTT+GGG | - | chr8_2:60725550-60725569 | Msa1259180:CDS | 50.0% |
GAGGTTGGGTTATGCCTGAA+AGG | - | chr8_2:60725564-60725583 | Msa1259180:CDS | 50.0% | |
!! | ACCTTCAAGAGAAGGGCGTT+GGG | + | chr8_2:60725698-60725717 | None:intergenic | 50.0% |
! | TACCTTCAAGAGAAGGGCGT+TGG | + | chr8_2:60725699-60725718 | None:intergenic | 50.0% |
GCCTGAAAAGCCGGTCAATT+TGG | + | chr8_2:60725898-60725917 | None:intergenic | 50.0% | |
!! | TTGACCGGCTTTTCAGGCTT+TGG | - | chr8_2:60725900-60725919 | Msa1259180:CDS | 50.0% |
AACCTAGACCAGAGCAACGT+GGG | + | chr8_2:60726089-60726108 | None:intergenic | 50.0% | |
! | TCCGCTTGTCAAGTGTCGTT+TGG | - | chr8_2:60726826-60726845 | Msa1259180:intron | 50.0% |
CCTTCTCTGCTAGTCAACTG+CGG | - | chr8_2:60727401-60727420 | Msa1259180:intron | 50.0% | |
GTCAGTTGTTCAGTTCGTCC+AGG | - | chr8_2:60727539-60727558 | Msa1259180:CDS | 50.0% | |
TGAAATGGCCCCTCAAGATG+TGG | - | chr8_2:60727570-60727589 | Msa1259180:CDS | 50.0% | |
GAGGATCAACTGCAGTTGCT+AGG | - | chr8_2:60727949-60727968 | Msa1259180:CDS | 50.0% | |
GACTGATAAGGAAGCAGCCT+TGG | - | chr8_2:60727981-60728000 | Msa1259180:CDS | 50.0% | |
! | GGAAGCAGCCTTGGATGTTT+TGG | - | chr8_2:60727990-60728009 | Msa1259180:CDS | 50.0% |
GATAGGTAAGGCTCACCGTT+TGG | + | chr8_2:60728078-60728097 | None:intergenic | 50.0% | |
GGCCCTTGGGCACAAATATT+CGG | + | chr8_2:60728155-60728174 | None:intergenic | 50.0% | |
CCAAGCAGCCAATCAGAACT+CGG | + | chr8_2:60728176-60728195 | None:intergenic | 50.0% | |
ATTGGCTGCTTGGATGAGAC+TGG | - | chr8_2:60728183-60728202 | Msa1259180:CDS | 50.0% | |
!! | TGCTCTGGAGGTGATCTTGA+CGG | - | chr8_2:60729448-60729467 | Msa1259180:intron | 50.0% |
GGACCATAAGGTGACACTAG+AGG | - | chr8_2:60729561-60729580 | Msa1259180:intron | 50.0% | |
!! | GACACGTGTTGGTGCTACAT+AGG | + | chr8_2:60729624-60729643 | None:intergenic | 50.0% |
TGAGTGACATCGACACGTGT+TGG | + | chr8_2:60729635-60729654 | None:intergenic | 50.0% | |
TGCTATCTCCACCGCACATT+TGG | - | chr8_2:60729843-60729862 | Msa1259180:intron | 50.0% | |
AGCATGAACCAAATGTGCGG+TGG | + | chr8_2:60729854-60729873 | None:intergenic | 50.0% | |
TGCTGACCGTGAACACGATA+AGG | - | chr8_2:60729870-60729889 | Msa1259180:intron | 50.0% | |
CTTCTATGGTGCAACGACTG+AGG | - | chr8_2:60730239-60730258 | Msa1259180:CDS | 50.0% | |
!! | ACCGTGCGTCTTATTTGCAG+AGG | - | chr8_2:60730289-60730308 | Msa1259180:CDS | 50.0% |
CCCTCTGCAAATAAGACGCA+CGG | + | chr8_2:60730293-60730312 | None:intergenic | 50.0% | |
!! | CCGTGCGTCTTATTTGCAGA+GGG | - | chr8_2:60730290-60730309 | Msa1259180:CDS | 50.0% |
GTTCATCTACGGGTAGCACT+TGG | - | chr8_2:60730661-60730680 | Msa1259180:CDS | 50.0% | |
!! | AGGGTCTTGTTAACGAGTGC+CGG | - | chr8_2:60730770-60730789 | Msa1259180:five_prime_UTR | 50.0% |
CACTCTCACTGCCCTAACCA+TGG | - | chr8_2:60725154-60725173 | Msa1259180:three_prime_UTR | 55.0% | |
ACGGTGGGTGTTTCGGATGA+AGG | + | chr8_2:60725185-60725204 | None:intergenic | 55.0% | |
!! | ATGTTGGTGACGCGAACGGT+GGG | + | chr8_2:60725200-60725219 | None:intergenic | 55.0% |
!! | TATGTTGGTGACGCGAACGG+TGG | + | chr8_2:60725201-60725220 | None:intergenic | 55.0% |
!! | GGGTATGTTGGTGACGCGAA+CGG | + | chr8_2:60725204-60725223 | None:intergenic | 55.0% |
GTATCGGAGAAGGTCGTTGG+CGG | + | chr8_2:60725237-60725256 | None:intergenic | 55.0% | |
!! | GAGGTATCGGAGAAGGTCGT+TGG | + | chr8_2:60725240-60725259 | None:intergenic | 55.0% |
CGATACCTCGAAACCACCGT+TGG | - | chr8_2:60725251-60725270 | Msa1259180:three_prime_UTR | 55.0% | |
GATTTCGAGAGCGAAGACGG+AGG | + | chr8_2:60725282-60725301 | None:intergenic | 55.0% | |
CCGTGTTCAGTTCGAGACGT+TGG | - | chr8_2:60725340-60725359 | Msa1259180:three_prime_UTR | 55.0% | |
TTACGAGGAAGAGCAGGCCT+AGG | + | chr8_2:60725461-60725480 | None:intergenic | 55.0% | |
ATGCGGTTACGAGGAAGAGC+AGG | + | chr8_2:60725467-60725486 | None:intergenic | 55.0% | |
!! | CATGGGAAGGTGTTCGAGGT+TGG | - | chr8_2:60725549-60725568 | Msa1259180:CDS | 55.0% |
ACCCAACGCCCTTCTCTTGA+AGG | - | chr8_2:60725694-60725713 | Msa1259180:CDS | 55.0% | |
AGGACTCACGTCGTTGAGGA+TGG | - | chr8_2:60726042-60726061 | Msa1259180:CDS | 55.0% | |
GGACTCACGTCGTTGAGGAT+GGG | - | chr8_2:60726043-60726062 | Msa1259180:CDS | 55.0% | |
ATTGGAGTCCCACGTTGCTC+TGG | - | chr8_2:60726078-60726097 | Msa1259180:CDS | 55.0% | |
CAACCTAGACCAGAGCAACG+TGG | + | chr8_2:60726090-60726109 | None:intergenic | 55.0% | |
CTCAGCTGAGATATGGGCCA+AGG | - | chr8_2:60726534-60726553 | Msa1259180:intron | 55.0% | |
AGGTTTCAAGCTCGGGACCA+AGG | + | chr8_2:60727165-60727184 | None:intergenic | 55.0% | |
CCGCAGTTGACTAGCAGAGA+AGG | + | chr8_2:60727404-60727423 | None:intergenic | 55.0% | |
! | GGCGCTTTTGGCATTGCAAG+AGG | - | chr8_2:60727930-60727949 | Msa1259180:CDS | 55.0% |
CCAATCAGAACTCGGCCCTT+GGG | + | chr8_2:60728168-60728187 | None:intergenic | 55.0% | |
! | CCGAGTTCTGATTGGCTGCT+TGG | - | chr8_2:60728173-60728192 | Msa1259180:CDS | 55.0% |
! | CCAGAGCACTCGTTTGGATG+AGG | + | chr8_2:60729436-60729455 | None:intergenic | 55.0% |
CCTCATCCAAACGAGTGCTC+TGG | - | chr8_2:60729433-60729452 | Msa1259180:intron | 55.0% | |
CATCCAAACGAGTGCTCTGG+AGG | - | chr8_2:60729436-60729455 | Msa1259180:intron | 55.0% | |
! | TCACCTCCAGAGCACTCGTT+TGG | + | chr8_2:60729442-60729461 | None:intergenic | 55.0% |
!! | GCTCTGGAGGTGATCTTGAC+GGG | - | chr8_2:60729449-60729468 | Msa1259180:intron | 55.0% |
! | CTCTGGAGGTGATCTTGACG+GGG | - | chr8_2:60729450-60729469 | Msa1259180:intron | 55.0% |
GTTGGCTGAGCTGCATTCCA+TGG | - | chr8_2:60729915-60729934 | Msa1259180:intron | 55.0% | |
GACGCGAACGGTGGGTGTTT+CGG | + | chr8_2:60725192-60725211 | None:intergenic | 60.0% | |
! | GGTGGCGGTATGGGGTATGT+TGG | + | chr8_2:60725216-60725235 | None:intergenic | 60.0% |
GTCCCACGTTGCTCTGGTCT+AGG | - | chr8_2:60726084-60726103 | Msa1259180:CDS | 60.0% | |
! | CCCAAGGGCCGAGTTCTGAT+TGG | - | chr8_2:60728165-60728184 | Msa1259180:CDS | 60.0% |
GCCAATCAGAACTCGGCCCT+TGG | + | chr8_2:60728169-60728188 | None:intergenic | 60.0% | |
! | TCGTTGGCGGTGGCGGTATG+GGG | + | chr8_2:60725224-60725243 | None:intergenic | 65.0% |
! | GTCGTTGGCGGTGGCGGTAT+GGG | + | chr8_2:60725225-60725244 | None:intergenic | 65.0% |
GAGAAGGTCGTTGGCGGTGG+CGG | + | chr8_2:60725231-60725250 | None:intergenic | 65.0% | |
TCGGAGAAGGTCGTTGGCGG+TGG | + | chr8_2:60725234-60725253 | None:intergenic | 65.0% | |
AGCGGCCAACGGTGGTTTCG+AGG | + | chr8_2:60725259-60725278 | None:intergenic | 65.0% | |
GAAGACGGAGGAGCGGCCAA+CGG | + | chr8_2:60725270-60725289 | None:intergenic | 65.0% | |
CGAGAGCGAAGACGGAGGAG+CGG | + | chr8_2:60725277-60725296 | None:intergenic | 65.0% | |
!! | CGGAGGAAGCGTCGAGACAG+AGG | + | chr8_2:60725427-60725446 | None:intergenic | 65.0% |
! | GGTCGTTGGCGGTGGCGGTA+TGG | + | chr8_2:60725226-60725245 | None:intergenic | 70.0% |
GACGGAGGAGCGGCCAACGG+TGG | + | chr8_2:60725267-60725286 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 60725110 | 60730818 | 60725110 | ID=Msa1259180;Name=Msa1259180 |
chr8_2 | mRNA | 60725110 | 60730818 | 60725110 | ID=Msa1259180-mRNA-1;Parent=Msa1259180;Name=Msa1259180-mRNA-1;_AED=0.05;_eAED=0.05;_QI=63|1|1|1|1|1|4|258|1123 |
chr8_2 | exon | 60725110 | 60726132 | 60725110 | ID=Msa1259180-mRNA-1:exon:19057;Parent=Msa1259180-mRNA-1 |
chr8_2 | exon | 60726346 | 60726496 | 60726346 | ID=Msa1259180-mRNA-1:exon:19056;Parent=Msa1259180-mRNA-1 |
chr8_2 | exon | 60727477 | 60729389 | 60727477 | ID=Msa1259180-mRNA-1:exon:19055;Parent=Msa1259180-mRNA-1 |
chr8_2 | exon | 60730213 | 60730818 | 60730213 | ID=Msa1259180-mRNA-1:exon:19054;Parent=Msa1259180-mRNA-1 |
chr8_2 | five_prime_UTR | 60730756 | 60730818 | 60730756 | ID=Msa1259180-mRNA-1:five_prime_utr;Parent=Msa1259180-mRNA-1 |
chr8_2 | CDS | 60730213 | 60730755 | 60730213 | ID=Msa1259180-mRNA-1:cds;Parent=Msa1259180-mRNA-1 |
chr8_2 | CDS | 60727477 | 60729389 | 60727477 | ID=Msa1259180-mRNA-1:cds;Parent=Msa1259180-mRNA-1 |
chr8_2 | CDS | 60726346 | 60726496 | 60726346 | ID=Msa1259180-mRNA-1:cds;Parent=Msa1259180-mRNA-1 |
chr8_2 | CDS | 60725368 | 60726132 | 60725368 | ID=Msa1259180-mRNA-1:cds;Parent=Msa1259180-mRNA-1 |
chr8_2 | three_prime_UTR | 60725110 | 60725367 | 60725110 | ID=Msa1259180-mRNA-1:three_prime_utr;Parent=Msa1259180-mRNA-1 |
Gene Sequence |
Protein sequence |