Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1396610 | XP_013457822.1 | 98.486 | 1123 | 17 | 0 | 1 | 1123 | 1 | 1123 | 0.0 | 2303 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1396610 | sp|O82504|RDR2_ARATH | 59.857 | 1121 | 436 | 11 | 5 | 1119 | 6 | 1118 | 0.0 | 1372 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1396610 | A0A072US42 | 98.486 | 1123 | 17 | 0 | 1 | 1123 | 1 | 1123 | 0.0 | 2303 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1259180 | Msa1396610 | 0.986359 | 1.591212e-166 | -8.615850e-47 |
Msa1298570 | Msa1396610 | 0.961939 | 2.748847e-120 | -8.615850e-47 |
Msa1330870 | Msa1396610 | 0.960532 | 1.153932e-118 | -8.615850e-47 |
Msa1172020 | Msa1396610 | 0.957602 | 1.826613e-115 | -8.615850e-47 |
Msa1172080 | Msa1396610 | 0.907267 | 6.091729e-81 | -8.615850e-47 |
Msa1172160 | Msa1396610 | 0.995879 | 6.773736e-221 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1396610 | MtrunA17_Chr4g0059271 | 98.486 | 1123 | 17 | 0 | 1 | 1123 | 1 | 1123 | 0.0 | 2303 |
Msa1396610 | MtrunA17_Chr1g0161451 | 37.445 | 1127 | 652 | 17 | 10 | 1115 | 4 | 1098 | 0.0 | 744 |
Msa1396610 | MtrunA17_Chr1g0161491 | 37.150 | 1144 | 637 | 20 | 7 | 1119 | 17 | 1109 | 0.0 | 735 |
Msa1396610 | MtrunA17_Chr1g0161471 | 37.610 | 1138 | 643 | 17 | 7 | 1119 | 3 | 1098 | 0.0 | 734 |
Msa1396610 | MtrunA17_Chr1g0161521 | 37.772 | 1149 | 620 | 25 | 6 | 1115 | 2 | 1094 | 0.0 | 710 |
Msa1396610 | MtrunA17_Chr1g0161511 | 37.118 | 1145 | 642 | 22 | 6 | 1119 | 2 | 1099 | 0.0 | 690 |
Msa1396610 | MtrunA17_Chr3g0137841 | 36.603 | 948 | 530 | 22 | 217 | 1116 | 254 | 1178 | 1.11e-177 | 553 |
Msa1396610 | MtrunA17_Chr4g0059261 | 54.190 | 179 | 47 | 3 | 879 | 1056 | 1 | 145 | 1.85e-49 | 172 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1396610 | AT4G11130.1 | 59.857 | 1121 | 436 | 11 | 5 | 1119 | 6 | 1118 | 0.0 | 1372 |
Msa1396610 | AT1G14790.1 | 38.707 | 1129 | 627 | 20 | 10 | 1118 | 4 | 1087 | 0.0 | 744 |
Msa1396610 | AT3G49500.3 | 34.791 | 1006 | 586 | 21 | 152 | 1115 | 193 | 1170 | 4.92e-172 | 538 |
Msa1396610 | AT3G49500.4 | 34.791 | 1006 | 586 | 21 | 152 | 1115 | 193 | 1170 | 4.92e-172 | 538 |
Msa1396610 | AT3G49500.1 | 34.791 | 1006 | 586 | 21 | 152 | 1115 | 193 | 1170 | 4.92e-172 | 538 |
Msa1396610 | AT3G49500.2 | 34.791 | 1006 | 586 | 21 | 152 | 1115 | 193 | 1170 | 4.92e-172 | 538 |
Msa1396610 | AT3G49500.5 | 34.791 | 1006 | 586 | 21 | 152 | 1115 | 193 | 1170 | 4.92e-172 | 538 |
Msa1396610 | AT2G19930.2 | 26.723 | 595 | 318 | 22 | 452 | 960 | 269 | 831 | 8.40e-30 | 128 |
Msa1396610 | AT2G19930.3 | 26.723 | 595 | 318 | 22 | 452 | 960 | 263 | 825 | 8.93e-30 | 128 |
Msa1396610 | AT2G19930.1 | 26.723 | 595 | 318 | 22 | 452 | 960 | 269 | 831 | 1.06e-29 | 128 |
Msa1396610 | AT2G19910.2 | 23.772 | 631 | 361 | 22 | 426 | 969 | 247 | 844 | 2.42e-28 | 124 |
Msa1396610 | AT2G19910.1 | 23.594 | 640 | 360 | 22 | 426 | 969 | 247 | 853 | 8.64e-28 | 122 |
Msa1396610 | AT2G19920.4 | 24.121 | 597 | 343 | 21 | 447 | 963 | 267 | 833 | 4.43e-26 | 116 |
Msa1396610 | AT2G19920.3 | 24.121 | 597 | 343 | 21 | 447 | 963 | 267 | 833 | 5.09e-26 | 116 |
Msa1396610 | AT2G19920.1 | 24.121 | 597 | 343 | 21 | 447 | 963 | 268 | 834 | 5.22e-26 | 116 |
Msa1396610 | AT2G19920.2 | 24.121 | 597 | 343 | 21 | 447 | 963 | 281 | 847 | 5.36e-26 | 116 |
Find 280 sgRNAs with CRISPR-Local
Find 456 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTAAATGTAAAAGCTATTA+TGG | 0.121735 | tig0022059:+2984 | None:intergenic |
AAAGGCAGAGACTTGATTTC+TGG | 0.185536 | tig0022059:-7957 | Msa1396610:CDS |
AATCTCAATCACTTTGAAAA+AGG | 0.199716 | tig0022059:-6260 | Msa1396610:CDS |
AAATCAAGTCTCTGCCTTTC+AGG | 0.202069 | tig0022059:+7961 | None:intergenic |
ACCCATTCTTGCTGCACATT+TGG | 0.246017 | tig0022059:+6021 | None:intergenic |
GGAAGCAGCCTTGGATGTTT+TGG | 0.247594 | tig0022059:-5549 | Msa1396610:CDS |
TTGCAAGTTTGAATCAATTA+TGG | 0.249399 | tig0022059:+3466 | None:intergenic |
ATGTCTCCATAACTTATATT+TGG | 0.262842 | tig0022059:+2927 | None:intergenic |
CTGGTGATCATATGCTTCTT+TGG | 0.269431 | tig0022059:+3409 | None:intergenic |
TATATATCCAAAGGTGTATT+AGG | 0.273653 | tig0022059:-3503 | Msa1396610:CDS |
TGCCTTGTATTTCCACAAAA+AGG | 0.275740 | tig0022059:-5116 | Msa1396610:CDS |
GTCGTTGGCGGTGGCGGTAT+GGG | 0.277922 | tig0022059:+8317 | None:intergenic |
TCTTGTTCTCGGCGAGAGTT+AGG | 0.279675 | tig0022059:+8160 | None:intergenic |
GAATGCTTTGCGTCACTAAA+TGG | 0.283123 | tig0022059:-5703 | Msa1396610:CDS |
AAATGTAGCTGCCAAGTTTA+AGG | 0.286106 | tig0022059:-6959 | Msa1396610:CDS |
ATCTCTTTGATGAGCTTCTA+TGG | 0.288965 | tig0022059:-3314 | Msa1396610:CDS |
TCAAACCTCTCCATGAAATC+TGG | 0.294279 | tig0022059:+3536 | None:intergenic |
AATTAAAGATGAGGCGCTTT+TGG | 0.304782 | tig0022059:-5621 | Msa1396610:CDS |
GGTCGTTGGCGGTGGCGGTA+TGG | 0.306523 | tig0022059:+8316 | None:intergenic |
TTCCTTCAGCATTTCAAATT+CGG | 0.314317 | tig0022059:-5820 | Msa1396610:CDS |
TTGATTCAAACTTGCAAGTA+AGG | 0.321264 | tig0022059:-3460 | Msa1396610:CDS |
TCTCTTGGTTTCAAAGATCT+TGG | 0.325340 | tig0022059:+3563 | None:intergenic |
TATTCTTCTCAGCTGAGATA+TGG | 0.333555 | tig0022059:-7012 | Msa1396610:intron |
TGCTATCTCCACCGCACATT+TGG | 0.333953 | tig0022059:-3696 | Msa1396610:CDS |
ATTCGGTATGGTGGATATAA+AGG | 0.339975 | tig0022059:-5803 | Msa1396610:CDS |
TCAGAGGTGATTTCAATATC+TGG | 0.341597 | tig0022059:+5938 | None:intergenic |
AAGAGAGTTTCCAGATTTCA+TGG | 0.342194 | tig0022059:-3546 | Msa1396610:CDS |
AAGCGTCGAGACAGAGGAAA+TGG | 0.352979 | tig0022059:+8121 | None:intergenic |
GTCATACTCATACTACAAAA+TGG | 0.353669 | tig0022059:+2903 | None:intergenic |
GCCAAGGATATATCAGAAAA+TGG | 0.356475 | tig0022059:-6989 | Msa1396610:CDS |
AGAGATAATGATTGATTAAG+AGG | 0.361305 | tig0022059:+2812 | None:intergenic |
GGCCCTTGGGCACAAATATT+CGG | 0.361333 | tig0022059:+5387 | None:intergenic |
CTTATTTGCAGAGGGATAAC+AGG | 0.361659 | tig0022059:-3241 | Msa1396610:CDS |
GTAAATGTAAAAGCTATTAT+GGG | 0.362309 | tig0022059:+2985 | None:intergenic |
AGGAAGAAGGCCTCGTATAA+TGG | 0.368988 | tig0022059:-3999 | Msa1396610:CDS |
TTAAACTTGGCAGCTACATT+TGG | 0.370092 | tig0022059:+6961 | None:intergenic |
GATCACCAGCTTGAAGTTGA+TGG | 0.370925 | tig0022059:-3395 | Msa1396610:CDS |
GGATTCCAAGTTACCTTATG+AGG | 0.373899 | tig0022059:-6692 | Msa1396610:CDS |
CTTCGAGATGGGATTCTAGT+TGG | 0.375811 | tig0022059:-6184 | Msa1396610:CDS |
GTGATTGAGATTGCATTGTT+TGG | 0.377189 | tig0022059:+6271 | None:intergenic |
TCCGCTTGTCAAGTGTCGTT+TGG | 0.377684 | tig0022059:-6713 | Msa1396610:CDS |
TAATTCCTAAGGTGGACAAC+AGG | 0.378356 | tig0022059:+5639 | None:intergenic |
AAGGAGAAGTTTCTTGTTCT+CGG | 0.378407 | tig0022059:+8149 | None:intergenic |
TACTGTTTCTCAGATGGTAT+TGG | 0.379094 | tig0022059:-5905 | Msa1396610:CDS |
TGTTTCTTTCAACTTTGGTT+TGG | 0.385184 | tig0022059:+8427 | None:intergenic |
CGATGGGAAAACCAGCATAA+AGG | 0.385658 | tig0022059:+8040 | None:intergenic |
TGATGAGTTGATTGACTTGT+TGG | 0.387549 | tig0022059:-6611 | Msa1396610:CDS |
GCCGCATGAATATCAACTTA+TGG | 0.388044 | tig0022059:-3132 | Msa1396610:CDS |
TAGTTTCCAAATATAAGTTA+TGG | 0.390100 | tig0022059:-2933 | Msa1396610:three_prime_UTR |
CCGAGTTCTGATTGGCTGCT+TGG | 0.391015 | tig0022059:-5366 | Msa1396610:CDS |
TTACCTCTAGTGTCACCTTA+TGG | 0.398055 | tig0022059:+3975 | None:intergenic |
GACGCGAACGGTGGGTGTTT+CGG | 0.398686 | tig0022059:+8350 | None:intergenic |
TTCTCAACTTTAAAGTCCAT+TGG | 0.399433 | tig0022059:-6877 | Msa1396610:CDS |
ATGAAGGAATCACCATGGTT+AGG | 0.399658 | tig0022059:+8373 | None:intergenic |
TTCCAAATGTGCAGCAAGAA+TGG | 0.406312 | tig0022059:-6023 | Msa1396610:CDS |
GGCCATTTCAAAAGTTTGCC+TGG | 0.408999 | tig0022059:+5982 | None:intergenic |
ACCCAACGCCCTTCTCTTGA+AGG | 0.410402 | tig0022059:-7845 | Msa1396610:intron |
ATACTTATCTCTGTGACTTA+TGG | 0.410941 | tig0022059:+3349 | None:intergenic |
TATGAACAAGAGAATTCAAT+TGG | 0.412886 | tig0022059:+6662 | None:intergenic |
ATGATAATTTCTTAAAAGAA+TGG | 0.414373 | tig0022059:+5762 | None:intergenic |
ATTCTTCTCAGCTGAGATAT+GGG | 0.418568 | tig0022059:-7011 | Msa1396610:intron |
CAGTGAAGAATTAGAAGAAA+AGG | 0.419054 | tig0022059:-5150 | Msa1396610:CDS |
ATTAGAAGAAAAGGGCTTGA+GGG | 0.420122 | tig0022059:-5141 | Msa1396610:CDS |
GGCCAAGAGTAGAAAATGTC+TGG | 0.424194 | tig0022059:-3648 | Msa1396610:CDS |
CTTCTTCCTGTGTAGTCCAT+TGG | 0.424934 | tig0022059:+4013 | None:intergenic |
ATGAAATCTGGAAACTCTCT+TGG | 0.426283 | tig0022059:+3548 | None:intergenic |
CGCCTCATCTTTAATTCCTA+AGG | 0.427060 | tig0022059:+5628 | None:intergenic |
CCAATCAGAACTCGGCCCTT+GGG | 0.428098 | tig0022059:+5374 | None:intergenic |
TGAAGGAATCACCATGGTTA+GGG | 0.430736 | tig0022059:+8374 | None:intergenic |
AACAATGGTGCCCTTTATGC+TGG | 0.433646 | tig0022059:-8051 | Msa1396610:CDS |
ATGGGAAGGTGTTCGAGGTT+GGG | 0.433950 | tig0022059:-7989 | Msa1396610:CDS |
ATGCTTTACCACATGATTTG+AGG | 0.435061 | tig0022059:+6357 | None:intergenic |
AACTGCGGTCAAATTCTGTT+TGG | 0.437464 | tig0022059:-6123 | Msa1396610:CDS |
TCACCTCCAGAGCACTCGTT+TGG | 0.439573 | tig0022059:+4100 | None:intergenic |
GAGACTGGTCTATTGAACTA+TGG | 0.441612 | tig0022059:-5341 | Msa1396610:CDS |
GATGGGAAAACCAGCATAAA+GGG | 0.442690 | tig0022059:+8041 | None:intergenic |
TCAAGGACTCTGATATCTCC+TGG | 0.445905 | tig0022059:+5182 | None:intergenic |
TGCTCTGGAGGTGATCTTGA+CGG | 0.447828 | tig0022059:-4091 | Msa1396610:CDS |
AAAGATCTTGGCATTTCTGC+AGG | 0.448689 | tig0022059:+3575 | None:intergenic |
TTACATGATCAATGATACTT+TGG | 0.449411 | tig0022059:-3720 | Msa1396610:CDS |
GATAGGTAAGGCTCACCGTT+TGG | 0.450059 | tig0022059:+5464 | None:intergenic |
TGATTTGAGGTTTCAAGCTC+GGG | 0.451659 | tig0022059:+6370 | None:intergenic |
ACTGAGGATGAAATGCTAAC+TGG | 0.452037 | tig0022059:-3284 | Msa1396610:CDS |
TCTCAACTTTAAAGTCCATT+GGG | 0.455669 | tig0022059:-6876 | Msa1396610:CDS |
TCGGAGAAGGTCGTTGGCGG+TGG | 0.457047 | tig0022059:+8308 | None:intergenic |
AAGGCAGAGACTTGATTTCT+GGG | 0.457890 | tig0022059:-7956 | Msa1396610:CDS |
ATATCCCTGTTGTCCACCTT+AGG | 0.460453 | tig0022059:-5644 | Msa1396610:CDS |
AAGTGTGTTTCTTTCAACTT+TGG | 0.460703 | tig0022059:+8422 | None:intergenic |
AGGAAAGATGTTGACTGATA+AGG | 0.461221 | tig0022059:-5570 | Msa1396610:CDS |
TTACATTTGTCGAAGAGGAT+TGG | 0.461457 | tig0022059:-6303 | Msa1396610:CDS |
GCTCTGGAGGTGATCTTGAC+GGG | 0.461676 | tig0022059:-4090 | Msa1396610:CDS |
GAGCCTTGAGCATCATTGAT+AGG | 0.462886 | tig0022059:+5447 | None:intergenic |
AGCTTTCGTTGTAATATTTG+TGG | 0.463226 | tig0022059:+3081 | None:intergenic |
GAGAAGGTCGTTGGCGGTGG+CGG | 0.463497 | tig0022059:+8311 | None:intergenic |
TTATATATTTCAGTTCTAAG+AGG | 0.464161 | tig0022059:+6223 | None:intergenic |
TCTTCAGCGACTACACCAAC+TGG | 0.465472 | tig0022059:-8239 | Msa1396610:CDS |
CATGGGAAGGTGTTCGAGGT+TGG | 0.467410 | tig0022059:-7990 | Msa1396610:CDS |
TGCTGACCGTGAACACGATA+AGG | 0.469968 | tig0022059:-3669 | Msa1396610:CDS |
ACCTTCAAGAGAAGGGCGTT+GGG | 0.470440 | tig0022059:+7844 | None:intergenic |
GCCTCGTATAATGGACCATA+AGG | 0.471634 | tig0022059:-3990 | Msa1396610:CDS |
CTGCCAAGTTTAAGGATGAT+AGG | 0.472401 | tig0022059:-6951 | Msa1396610:CDS |
TCTTGGCCTTATCGTGTTCA+CGG | 0.472605 | tig0022059:+3663 | None:intergenic |
AAGACCCTCATAAGGTAACT+TGG | 0.473229 | tig0022059:+6687 | None:intergenic |
AATTTGGAGATGAAAACTTA+AGG | 0.473286 | tig0022059:-5277 | Msa1396610:CDS |
AGTGAAGAATTAGAAGAAAA+GGG | 0.474853 | tig0022059:-5149 | Msa1396610:CDS |
ACTTGATTTCTGGGTCACTC+AGG | 0.476813 | tig0022059:-7947 | Msa1396610:CDS |
CTTGTTCTCGGCGAGAGTTA+GGG | 0.479196 | tig0022059:+8161 | None:intergenic |
GATAGCACACGTATTATAGT+AGG | 0.479258 | tig0022059:-5239 | Msa1396610:CDS |
TGAAGCACACTCATGCAATC+AGG | 0.481424 | tig0022059:+8015 | None:intergenic |
TCGTTGGCGGTGGCGGTATG+GGG | 0.481457 | tig0022059:+8318 | None:intergenic |
GAATTTGAAGGATCTAAGTC+TGG | 0.481716 | tig0022059:-6773 | Msa1396610:CDS |
TACCTTCAAGAGAAGGGCGT+TGG | 0.481883 | tig0022059:+7843 | None:intergenic |
CTCAGTAAAGGATCTTCAGC+TGG | 0.482094 | tig0022059:-3186 | Msa1396610:CDS |
TATTGAATATTCTTCGAGAT+GGG | 0.484103 | tig0022059:-6195 | Msa1396610:CDS |
ATGATTTGAGGTTTCAAGCT+CGG | 0.484910 | tig0022059:+6369 | None:intergenic |
GACTGATAAGGAAGCAGCCT+TGG | 0.485593 | tig0022059:-5558 | Msa1396610:CDS |
TCCAAATGTGCAGCAAGAAT+GGG | 0.486535 | tig0022059:-6022 | Msa1396610:CDS |
GTTCATCTACGGGTAGCACT+TGG | 0.486565 | tig0022059:-2878 | Msa1396610:three_prime_UTR |
AATCTTTGACGGGGTAATCA+AGG | 0.487076 | tig0022059:+6405 | None:intergenic |
TTAAGCTTTCCATGGATTGT+CGG | 0.487901 | tig0022059:-3050 | Msa1396610:CDS |
AGCGGCCAACGGTGGTTTCG+AGG | 0.488002 | tig0022059:+8283 | None:intergenic |
CAGTTATGCGGACAAATACT+TGG | 0.489042 | tig0022059:+5318 | None:intergenic |
GATTGACTTGTTGGTAAGCT+TGG | 0.489425 | tig0022059:-6602 | Msa1396610:CDS |
TACATGATCAATGATACTTT+GGG | 0.492368 | tig0022059:-3719 | Msa1396610:CDS |
AGCAGATATCAGAGAATGGA+TGG | 0.494048 | tig0022059:-6071 | Msa1396610:CDS |
CCTCATCCAAACGAGTGCTC+TGG | 0.495371 | tig0022059:-4106 | Msa1396610:CDS |
ACGGTGGGTGTTTCGGATGA+AGG | 0.497872 | tig0022059:+8357 | None:intergenic |
GAGTATGACATGTTCATCTA+CGG | 0.498802 | tig0022059:-2889 | Msa1396610:three_prime_UTR |
GGTGGCGGTATGGGGTATGT+TGG | 0.499318 | tig0022059:+8326 | None:intergenic |
GAGGTATCGGAGAAGGTCGT+TGG | 0.500329 | tig0022059:+8302 | None:intergenic |
GAATTAAATCCACATCTTGA+GGG | 0.500437 | tig0022059:+5960 | None:intergenic |
TTAAAATGTTTAAAGAGTGC+CGG | 0.502743 | tig0022059:+2750 | None:intergenic |
ATTGGCTGCTTGGATGAGAC+TGG | 0.502836 | tig0022059:-5356 | Msa1396610:CDS |
ACAAGCGGAACTGTTTCAGT+TGG | 0.503145 | tig0022059:+6727 | None:intergenic |
CACACGTATTATAGTAGGTA+AGG | 0.504821 | tig0022059:-5234 | Msa1396610:CDS |
TGTAAAAGCTATTATGGGAC+AGG | 0.505147 | tig0022059:+2990 | None:intergenic |
TCGAATTCTAATCTCAGTAA+AGG | 0.506278 | tig0022059:-3198 | Msa1396610:CDS |
GCATGAGTGTGCTTCAATCA+TGG | 0.506625 | tig0022059:-8008 | Msa1396610:CDS |
GACAGAGGAAATGGGAGCTA+AGG | 0.506663 | tig0022059:+8130 | None:intergenic |
GTTGTAATATTTGTGGTGAT+AGG | 0.508964 | tig0022059:+3088 | None:intergenic |
GAAGATTTCGAGAGCGAAGA+CGG | 0.509538 | tig0022059:+8257 | None:intergenic |
ACACCTTTGGATATATACAT+AGG | 0.510540 | tig0022059:+3509 | None:intergenic |
AGGATATATCAGAAAATGGC+GGG | 0.511059 | tig0022059:-6985 | Msa1396610:CDS |
GAGATAATGATTGATTAAGA+GGG | 0.511789 | tig0022059:+2813 | None:intergenic |
CCGTCAAAGATTTATTGCCT+TGG | 0.512172 | tig0022059:-6394 | Msa1396610:CDS |
TTCAGCTGGAAGCTAAAGAA+TGG | 0.512543 | tig0022059:-3172 | Msa1396610:CDS |
TTCAAATTCTCTCTGTAGAG+CGG | 0.513592 | tig0022059:+6787 | None:intergenic |
AGGGTCTTGTTAACGAGTGC+CGG | 0.514581 | tig0022059:-2769 | Msa1396610:three_prime_UTR |
CAAGGCAATAAATCTTTGAC+GGG | 0.515130 | tig0022059:+6395 | None:intergenic |
GTTGGCTGAGCTGCATTCCA+TGG | 0.515719 | tig0022059:-3624 | Msa1396610:CDS |
GGAATTAAATCCACATCTTG+AGG | 0.517345 | tig0022059:+5959 | None:intergenic |
AAGCTTGGATGCAGAAACTA+AGG | 0.517404 | tig0022059:-6587 | Msa1396610:CDS |
GATGGGTATTGTTCTGATGA+AGG | 0.517540 | tig0022059:-7874 | Msa1396610:CDS |
CAGGAGATACGGAGATATGA+AGG | 0.520429 | tig0022059:-3222 | Msa1396610:CDS |
GCATTTCAAATTCGGTATGG+TGG | 0.520713 | tig0022059:-5812 | Msa1396610:CDS |
AAAATGTCACCGACAATCCA+TGG | 0.520826 | tig0022059:+3041 | None:intergenic |
CCAAGGCAATAAATCTTTGA+CGG | 0.522349 | tig0022059:+6394 | None:intergenic |
AGCGTCGAGACAGAGGAAAT+GGG | 0.523626 | tig0022059:+8122 | None:intergenic |
CAACGGTGGTTTCGAGGTAT+CGG | 0.524158 | tig0022059:+8289 | None:intergenic |
CCAGAGCACTCGTTTGGATG+AGG | 0.526144 | tig0022059:+4106 | None:intergenic |
AATTGGAAAAGACCCTCATA+AGG | 0.526321 | tig0022059:+6679 | None:intergenic |
TATGTTGGTGACGCGAACGG+TGG | 0.526738 | tig0022059:+8341 | None:intergenic |
TCAAATTCTCTCTGTAGAGC+GGG | 0.527074 | tig0022059:+6788 | None:intergenic |
CCTCCGATGACATCATTCCT+AGG | 0.527766 | tig0022059:-8098 | Msa1396610:CDS |
TAGAACTGAAATATATAAGC+GGG | 0.527945 | tig0022059:-6218 | Msa1396610:CDS |
ATATCTCCTGGGTGAAGACA+AGG | 0.528826 | tig0022059:+5194 | None:intergenic |
CAGAGGGATAACAGGAGATA+CGG | 0.530199 | tig0022059:-3233 | Msa1396610:CDS |
GATATTGAAATCACCTCTGA+TGG | 0.531578 | tig0022059:-5935 | Msa1396610:CDS |
TAAACTTTCCAAAACATCCA+AGG | 0.533340 | tig0022059:+5541 | None:intergenic |
GTATTGAATATTCTTCGAGA+TGG | 0.533472 | tig0022059:-6196 | Msa1396610:CDS |
GTCAGTTGTTCAGTTCGTCC+AGG | 0.534486 | tig0022059:-6000 | Msa1396610:CDS |
CAATCATGGGAAGGTGTTCG+AGG | 0.534880 | tig0022059:-7994 | Msa1396610:CDS |
AATAATGTACCTTCAAGAGA+AGG | 0.536479 | tig0022059:+7836 | None:intergenic |
AAGGATCTAAGTCTGGAAGA+TGG | 0.537009 | tig0022059:-6766 | Msa1396610:CDS |
TCAGCATTTCAAATTCGGTA+TGG | 0.541932 | tig0022059:-5815 | Msa1396610:CDS |
TTACGAGGAAGAGCAGGCCT+AGG | 0.542828 | tig0022059:+8081 | None:intergenic |
GATTCCAAGTTACCTTATGA+GGG | 0.542917 | tig0022059:-6691 | Msa1396610:CDS |
GAGGATCAACTGCAGTTGCT+AGG | 0.543687 | tig0022059:-5590 | Msa1396610:CDS |
AATTAGAAGAAAAGGGCTTG+AGG | 0.544606 | tig0022059:-5142 | Msa1396610:CDS |
ATGCGGTTACGAGGAAGAGC+AGG | 0.546517 | tig0022059:+8075 | None:intergenic |
ATGCCGAATATTTGTGCCCA+AGG | 0.547697 | tig0022059:-5390 | Msa1396610:CDS |
ATACCTATCATCCTTAAACT+TGG | 0.548449 | tig0022059:+6948 | None:intergenic |
CGGAGGAAGCGTCGAGACAG+AGG | 0.549019 | tig0022059:+8115 | None:intergenic |
TTCATCTACGGGTAGCACTT+GGG | 0.550826 | tig0022059:-2877 | Msa1396610:three_prime_UTR |
GCTCTACAGAGAGAATTTGA+AGG | 0.554058 | tig0022059:-6785 | Msa1396610:CDS |
AGCTCAAACTGAAAATCCAA+TGG | 0.558132 | tig0022059:-4029 | Msa1396610:CDS |
CTTGATTTCTGGGTCACTCA+GGG | 0.560046 | tig0022059:-7946 | Msa1396610:CDS |
CTTTGCAAAATCAACTGCCA+TGG | 0.561690 | tig0022059:+3607 | None:intergenic |
ATCTCTCGATTGAGAAAGCA+CGG | 0.562182 | tig0022059:+5668 | None:intergenic |
CCCTCTGCAAATAAGACGCA+CGG | 0.562446 | tig0022059:+3249 | None:intergenic |
AGTATGACATGTTCATCTAC+GGG | 0.563607 | tig0022059:-2888 | Msa1396610:three_prime_UTR |
TTGAGCATCATTGATAGGTA+AGG | 0.565773 | tig0022059:+5452 | None:intergenic |
GAGGTTGGGTTATGCCTGAA+AGG | 0.566352 | tig0022059:-7975 | Msa1396610:CDS |
CCAAGCAGCCAATCAGAACT+CGG | 0.567198 | tig0022059:+5366 | None:intergenic |
GACGGAGGAGCGGCCAACGG+TGG | 0.569208 | tig0022059:+8275 | None:intergenic |
GAAGACGGAGGAGCGGCCAA+CGG | 0.569296 | tig0022059:+8272 | None:intergenic |
CATCCAAACGAGTGCTCTGG+AGG | 0.571761 | tig0022059:-4103 | Msa1396610:CDS |
CTCAGCTGAGATATGGGCCA+AGG | 0.573402 | tig0022059:-7005 | Msa1396610:intron |
ACTCATGCAATCAGGACCGA+TGG | 0.575204 | tig0022059:+8023 | None:intergenic |
TGAAATGGCCCCTCAAGATG+TGG | 0.577783 | tig0022059:-5969 | Msa1396610:CDS |
GGGTATGTTGGTGACGCGAA+CGG | 0.578509 | tig0022059:+8338 | None:intergenic |
TTCTAGTCAAGATGCTGCAT+AGG | 0.579278 | tig0022059:-5496 | Msa1396610:CDS |
CAATGGACTACACAGGAAGA+AGG | 0.581873 | tig0022059:-4012 | Msa1396610:CDS |
CATGAGTGTGCTTCAATCAT+GGG | 0.584065 | tig0022059:-8007 | Msa1396610:CDS |
AGGTTTCAAGCTCGGGACCA+AGG | 0.584833 | tig0022059:+6377 | None:intergenic |
CAAAACCATCAACTTCAAGC+TGG | 0.585160 | tig0022059:+3390 | None:intergenic |
GAGTAGAAAATGTCTGGAGT+TGG | 0.587027 | tig0022059:-3642 | Msa1396610:CDS |
CCGCAGTTGACTAGCAGAGA+AGG | 0.587586 | tig0022059:+6138 | None:intergenic |
AACTGGAAATCTCGCGGAGT+AGG | 0.587687 | tig0022059:-8222 | Msa1396610:CDS |
CCTCGTAACCGCATCAACAA+TGG | 0.589683 | tig0022059:-8066 | Msa1396610:CDS |
AAACCTATGTATATATCCAA+AGG | 0.590044 | tig0022059:-3512 | Msa1396610:CDS |
CTCTGGAGGTGATCTTGACG+GGG | 0.590343 | tig0022059:-4089 | Msa1396610:CDS |
AAGCAGCAGATATCAGAGAA+TGG | 0.591150 | tig0022059:-6075 | Msa1396610:CDS |
GTATCGGAGAAGGTCGTTGG+CGG | 0.591381 | tig0022059:+8305 | None:intergenic |
CGAGAGCGAAGACGGAGGAG+CGG | 0.591558 | tig0022059:+8265 | None:intergenic |
ATGTTGGTGACGCGAACGGT+GGG | 0.593609 | tig0022059:+8342 | None:intergenic |
CAAGGACTCTGATATCTCCT+GGG | 0.594584 | tig0022059:+5183 | None:intergenic |
ATAGACTACTGTTTCTCAGA+TGG | 0.597479 | tig0022059:-5911 | Msa1396610:CDS |
CTTCACTGTAGACAGCATCA+AGG | 0.597815 | tig0022059:+5165 | None:intergenic |
CTTGCAAGTAAGGTTTGACA+TGG | 0.598486 | tig0022059:-3450 | Msa1396610:CDS |
AGTTTCCAGATTTCATGGAG+AGG | 0.599984 | tig0022059:-3541 | Msa1396610:CDS |
TTACCTATCAATGATGCTCA+AGG | 0.600272 | tig0022059:-5450 | Msa1396610:CDS |
TGGTTTCGAGGTATCGGAGA+AGG | 0.600522 | tig0022059:+8295 | None:intergenic |
CTCATCTTTAATTCCTAAGG+TGG | 0.601222 | tig0022059:+5631 | None:intergenic |
ATAATGTACCTTCAAGAGAA+GGG | 0.602102 | tig0022059:+7837 | None:intergenic |
TACCGAATTTGAAATGCTGA+AGG | 0.602636 | tig0022059:+5818 | None:intergenic |
GAGGATTACATTTGTCGAAG+AGG | 0.605467 | tig0022059:-6308 | Msa1396610:CDS |
TCCAAACGACACTTGACAAG+CGG | 0.605528 | tig0022059:+6712 | None:intergenic |
AAAGGGCACCATTGTTGATG+CGG | 0.606832 | tig0022059:+8058 | None:intergenic |
ACCGTGCGTCTTATTTGCAG+AGG | 0.612147 | tig0022059:-3250 | Msa1396610:CDS |
CTTATCTCTGTGACTTATGG+CGG | 0.614852 | tig0022059:+3352 | None:intergenic |
AATTCCTAAGGTGGACAACA+GGG | 0.615361 | tig0022059:+5640 | None:intergenic |
CCGTGTTCAGTTCGAGACGT+TGG | 0.616185 | tig0022059:-8199 | Msa1396610:CDS |
AAATGAGGTTGAGTGCCCAA+TGG | 0.616736 | tig0022059:+6861 | None:intergenic |
AAAGCTATTATGGGACAGGA+GGG | 0.619131 | tig0022059:+2994 | None:intergenic |
ACAGTAGTCTATACCATCAG+AGG | 0.619390 | tig0022059:+5922 | None:intergenic |
CACTCTCACTGCCCTAACCA+TGG | 0.619917 | tig0022059:-8385 | Msa1396610:exon |
CATATGCTTCAGACTTCATG+AGG | 0.619958 | tig0022059:-6327 | Msa1396610:CDS |
AAAAGCTATTATGGGACAGG+AGG | 0.621171 | tig0022059:+2993 | None:intergenic |
ATCAACTTATGGCATCTGCA+TGG | 0.623828 | tig0022059:-3121 | Msa1396610:CDS |
CCATTGTTGATGCGGTTACG+AGG | 0.625862 | tig0022059:+8066 | None:intergenic |
TGCCGAATATTTGTGCCCAA+GGG | 0.626409 | tig0022059:-5389 | Msa1396610:CDS |
GAAAACTTAAGGAACGTGGA+TGG | 0.627342 | tig0022059:-5266 | Msa1396610:CDS |
TTAGAACTGAAATATATAAG+CGG | 0.627448 | tig0022059:-6219 | Msa1396610:CDS |
AGGCCTAGGAATGATGTCAT+CGG | 0.630434 | tig0022059:+8095 | None:intergenic |
CCGTGCGTCTTATTTGCAGA+GGG | 0.630926 | tig0022059:-3249 | Msa1396610:CDS |
CCAACGTCTCGAACTGAACA+CGG | 0.635423 | tig0022059:+8199 | None:intergenic |
CTCATGCAATCAGGACCGAT+GGG | 0.635720 | tig0022059:+8024 | None:intergenic |
CACCTTAGGAATTAAAGATG+AGG | 0.636864 | tig0022059:-5630 | Msa1396610:CDS |
GATTTCGAGAGCGAAGACGG+AGG | 0.642616 | tig0022059:+8260 | None:intergenic |
GCAGATATCAGAGAATGGAT+GGG | 0.645198 | tig0022059:-6070 | Msa1396610:CDS |
ATTTGTGGTGATAGGTCACA+TGG | 0.648197 | tig0022059:+3096 | None:intergenic |
CTTCTATGGTGCAACGACTG+AGG | 0.648233 | tig0022059:-3300 | Msa1396610:CDS |
AGTTTGAATCAATTATGGCA+CGG | 0.648573 | tig0022059:+3471 | None:intergenic |
AGCATGAACCAAATGTGCGG+TGG | 0.651334 | tig0022059:+3688 | None:intergenic |
GAAAATCCAATGGACTACAC+AGG | 0.652832 | tig0022059:-4019 | Msa1396610:CDS |
ATGAGCCTCTAAAATATGTG+AGG | 0.655312 | tig0022059:-6522 | Msa1396610:CDS |
AATTAAATCCACATCTTGAG+GGG | 0.658323 | tig0022059:+5961 | None:intergenic |
TACTCCGCGAGATTTCCAGT+TGG | 0.659482 | tig0022059:+8224 | None:intergenic |
AGATGAAAACTTAAGGAACG+TGG | 0.661382 | tig0022059:-5270 | Msa1396610:CDS |
GGATATATCAGAAAATGGCG+GGG | 0.662600 | tig0022059:-6984 | Msa1396610:CDS |
ACGTATTATAGTAGGTAAGG+TGG | 0.663508 | tig0022059:-5231 | Msa1396610:CDS |
GCCATAAGTTGATATTCATG+CGG | 0.666800 | tig0022059:+3131 | None:intergenic |
GCTTGAAACCTCAAATCATG+TGG | 0.667801 | tig0022059:-6365 | Msa1396610:CDS |
AAGGATATATCAGAAAATGG+CGG | 0.669867 | tig0022059:-6986 | Msa1396610:CDS |
AGTATTTGTCCGCATAACTG+TGG | 0.671573 | tig0022059:-5315 | Msa1396610:CDS |
TATCTCCTGGGTGAAGACAA+GGG | 0.677342 | tig0022059:+5195 | None:intergenic |
GGACCATAAGGTGACACTAG+AGG | 0.679180 | tig0022059:-3978 | Msa1396610:intron |
GTCAGCATGAACCAAATGTG+CGG | 0.682533 | tig0022059:+3685 | None:intergenic |
TACACCAACTGGAAATCTCG+CGG | 0.683114 | tig0022059:-8228 | Msa1396610:CDS |
CGATACCTCGAAACCACCGT+TGG | 0.683116 | tig0022059:-8288 | Msa1396610:CDS |
ACCTTATGGTCCATTATACG+AGG | 0.683594 | tig0022059:+3989 | None:intergenic |
CTTTAAAGTTGAGAAGTCAG+TGG | 0.685540 | tig0022059:+6885 | None:intergenic |
CCTAGGAATGATGTCATCGG+AGG | 0.687166 | tig0022059:+8098 | None:intergenic |
TTCGGATGAAGGAATCACCA+TGG | 0.700240 | tig0022059:+8368 | None:intergenic |
CCTTCTCTGCTAGTCAACTG+CGG | 0.703161 | tig0022059:-6138 | Msa1396610:CDS |
AAGCTATTATGGGACAGGAG+GGG | 0.709108 | tig0022059:+2995 | None:intergenic |
AGTGTGCTTCAATCATGGGA+AGG | 0.715224 | tig0022059:-8003 | Msa1396610:CDS |
CTGCACATTTGGAAACACTG+CGG | 0.755401 | tig0022059:+6032 | None:intergenic |
AAGGCAATAAATCTTTGACG+GGG | 0.771887 | tig0022059:+6396 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAATAGAAAAAGAAAA+AGG | + | tig0022059:6263-6282 | None:intergenic | 10.0% |
!!! | CATCTAAATAATTTATTTTA+AGG | - | tig0022059:8383-8402 | Msa1396610:exon | 10.0% |
!!! | AATTCCTTTTGAAAATATTT+TGG | - | tig0022059:3270-3289 | Msa1396610:CDS | 15.0% |
!! | TATAAGTTGTTTATACAAAT+TGG | - | tig0022059:3983-4002 | Msa1396610:CDS | 15.0% |
!! | ATAAGTTGTTTATACAAATT+GGG | - | tig0022059:3984-4003 | Msa1396610:CDS | 15.0% |
!! | ATGATAATTTCTTAAAAGAA+TGG | + | tig0022059:5413-5432 | None:intergenic | 15.0% |
!!! | TCATAAAAGTTTAATTTGTT+AGG | + | tig0022059:6765-6784 | None:intergenic | 15.0% |
!! | TTCAGATTTATTTAGAAAAA+CGG | + | tig0022059:6856-6875 | None:intergenic | 15.0% |
!! | ACATTATTTGTTTATGTGTT+AGG | - | tig0022059:3351-3370 | Msa1396610:CDS | 20.0% |
!! | CATTATTTGTTTATGTGTTA+GGG | - | tig0022059:3352-3371 | Msa1396610:CDS | 20.0% |
!! | ATTTGATACCATGTTAAATA+TGG | + | tig0022059:3621-3640 | None:intergenic | 20.0% |
!! | TTTGATGTATAAATGTGTTT+GGG | - | tig0022059:3743-3762 | Msa1396610:CDS | 20.0% |
!! | AAATCACTCAAATTGAAATA+AGG | + | tig0022059:4039-4058 | None:intergenic | 20.0% |
!!! | ATTTCAATTTGAGTGATTTT+TGG | - | tig0022059:4040-4059 | Msa1396610:CDS | 20.0% |
!!! | TTTCAATTTGAGTGATTTTT+GGG | - | tig0022059:4041-4060 | Msa1396610:CDS | 20.0% |
!! | TAAATCAATAACAGAATGAA+AGG | + | tig0022059:4093-4112 | None:intergenic | 20.0% |
!! | GAAGAATAACAAAACATAAA+GGG | + | tig0022059:4148-4167 | None:intergenic | 20.0% |
!! | AGAAGAATAACAAAACATAA+AGG | + | tig0022059:4149-4168 | None:intergenic | 20.0% |
!!! | TTATATATTTCAGTTCTAAG+AGG | + | tig0022059:4952-4971 | None:intergenic | 20.0% |
!! | TTAGAACTGAAATATATAAG+CGG | - | tig0022059:4953-4972 | Msa1396610:intron | 20.0% |
!!! | TTCTTTTTCTCTCTTTTTAT+TGG | + | tig0022059:6289-6308 | None:intergenic | 20.0% |
!! | AATAAAAAGAGAGAAAAAGA+AGG | - | tig0022059:6288-6307 | Msa1396610:CDS | 20.0% |
!!! | TAAAAGTTTAATTTGTTAGG+TGG | + | tig0022059:6762-6781 | None:intergenic | 20.0% |
!!! | AATTAAACTTTTATGAGTGT+TGG | - | tig0022059:6769-6788 | Msa1396610:CDS | 20.0% |
!! | TCAGATTTATTTAGAAAAAC+GGG | + | tig0022059:6855-6874 | None:intergenic | 20.0% |
!! | AGTGTTTCTTTAAACAAAAT+TGG | - | tig0022059:7363-7382 | Msa1396610:intron | 20.0% |
!! | TCATGTAATCAACAAAAAAT+TGG | + | tig0022059:7440-7459 | None:intergenic | 20.0% |
!! | GTAAATGTAAAAGCTATTAT+GGG | + | tig0022059:8190-8209 | None:intergenic | 20.0% |
!! | TGTAAATGTAAAAGCTATTA+TGG | + | tig0022059:8191-8210 | None:intergenic | 20.0% |
!! | TAGTTTCCAAATATAAGTTA+TGG | - | tig0022059:8239-8258 | Msa1396610:CDS | 20.0% |
!! | CACTCCAAAATATTTTCAAA+AGG | + | tig0022059:3277-3296 | None:intergenic | 25.0% |
!!! | AAAATATTTTGGAGTGTGAT+GGG | - | tig0022059:3281-3300 | Msa1396610:CDS | 25.0% |
! | ACTTATTGTTGAAGTTGTAT+TGG | - | tig0022059:3501-3520 | Msa1396610:CDS | 25.0% |
! | ATCTAAGTCCATATTTAACA+TGG | - | tig0022059:3610-3629 | Msa1396610:CDS | 25.0% |
! | TTTAACATGGTATCAAATCT+AGG | - | tig0022059:3623-3642 | Msa1396610:CDS | 25.0% |
! | TAGGTTAAGAATTGCAATAT+GGG | - | tig0022059:3642-3661 | Msa1396610:CDS | 25.0% |
! | GTTTGATGTATAAATGTGTT+TGG | - | tig0022059:3742-3761 | Msa1396610:CDS | 25.0% |
! | CATAATTTCCCAAAAAAATG+AGG | + | tig0022059:4329-4348 | None:intergenic | 25.0% |
!!! | CTCATTTTTTTGGGAAATTA+TGG | - | tig0022059:4327-4346 | Msa1396610:intron | 25.0% |
! | TATGAACAAGAGAATTCAAT+TGG | + | tig0022059:4513-4532 | None:intergenic | 25.0% |
!! | AATCTCAATCACTTTGAAAA+AGG | - | tig0022059:4912-4931 | Msa1396610:intron | 25.0% |
!! | ATCTCAATCACTTTGAAAAA+GGG | - | tig0022059:4913-4932 | Msa1396610:intron | 25.0% |
! | TAGAACTGAAATATATAAGC+GGG | - | tig0022059:4954-4973 | Msa1396610:intron | 25.0% |
! | TATTGAATATTCTTCGAGAT+GGG | - | tig0022059:4977-4996 | Msa1396610:intron | 25.0% |
!!! | GATGTTTTGGAAAGTTTAAA+TGG | - | tig0022059:5636-5655 | Msa1396610:CDS | 25.0% |
! | GCAAAAACTAAGGAAAAATT+TGG | - | tig0022059:5879-5898 | Msa1396610:CDS | 25.0% |
! | AATTTGGAGATGAAAACTTA+AGG | - | tig0022059:5895-5914 | Msa1396610:CDS | 25.0% |
! | AGTGAAGAATTAGAAGAAAA+GGG | - | tig0022059:6023-6042 | Msa1396610:CDS | 25.0% |
! | AAACCATTATATACATACCT+AGG | + | tig0022059:6083-6102 | None:intergenic | 25.0% |
! | TTATTACAATCAAATGCAGT+TGG | + | tig0022059:6112-6131 | None:intergenic | 25.0% |
! | AAAAAGAAAAAGGAAGATAG+AGG | + | tig0022059:6253-6272 | None:intergenic | 25.0% |
! | TCACAAAAGTTGTTATCAAA+TGG | - | tig0022059:6314-6333 | Msa1396610:CDS | 25.0% |
! | TAAGAAATTGAGTTAAGTAG+AGG | + | tig0022059:6513-6532 | None:intergenic | 25.0% |
! | GTAAACAACATGTAACATAT+TGG | + | tig0022059:6609-6628 | None:intergenic | 25.0% |
! | CATATACCTTGTTAGATATT+AGG | - | tig0022059:6733-6752 | Msa1396610:CDS | 25.0% |
! | CAGATTTATTTAGAAAAACG+GGG | + | tig0022059:6854-6873 | None:intergenic | 25.0% |
! | ATTCTAACATAAAGTAGACT+AGG | - | tig0022059:6897-6916 | Msa1396610:CDS | 25.0% |
!!! | GGATTTATTTTTCATAAGCT+GGG | - | tig0022059:7104-7123 | Msa1396610:intron | 25.0% |
! | TTACATGATCAATGATACTT+TGG | - | tig0022059:7452-7471 | Msa1396610:intron | 25.0% |
! | TACATGATCAATGATACTTT+GGG | - | tig0022059:7453-7472 | Msa1396610:intron | 25.0% |
! | AAACCTATGTATATATCCAA+AGG | - | tig0022059:7660-7679 | Msa1396610:intron | 25.0% |
!! | TATATATCCAAAGGTGTATT+AGG | - | tig0022059:7669-7688 | Msa1396610:intron | 25.0% |
! | TTGCAAGTTTGAATCAATTA+TGG | + | tig0022059:7709-7728 | None:intergenic | 25.0% |
!! | AACTAAGCTACAATCTTTTT+AGG | + | tig0022059:8224-8243 | None:intergenic | 25.0% |
! | ATGTCTCCATAACTTATATT+TGG | + | tig0022059:8248-8267 | None:intergenic | 25.0% |
! | GAGATAATGATTGATTAAGA+GGG | + | tig0022059:8362-8381 | None:intergenic | 25.0% |
! | AGAGATAATGATTGATTAAG+AGG | + | tig0022059:8363-8382 | None:intergenic | 25.0% |
!! | TTAAAATGTTTAAAGAGTGC+CGG | + | tig0022059:8425-8444 | None:intergenic | 25.0% |
TGTTTCTTTCAACTTTGGTT+TGG | + | tig0022059:2748-2767 | None:intergenic | 30.0% | |
AAGTGTGTTTCTTTCAACTT+TGG | + | tig0022059:2753-2772 | None:intergenic | 30.0% | |
!!! | GAAAATATTTTGGAGTGTGA+TGG | - | tig0022059:3280-3299 | Msa1396610:CDS | 30.0% |
ATAATGTACCTTCAAGAGAA+GGG | + | tig0022059:3338-3357 | None:intergenic | 30.0% | |
AATAATGTACCTTCAAGAGA+AGG | + | tig0022059:3339-3358 | None:intergenic | 30.0% | |
!! | TGGACTTATTTTCAGCTTAT+TGG | - | tig0022059:3386-3405 | Msa1396610:CDS | 30.0% |
TTTGGATGTGTAAATGTGTT+TGG | - | tig0022059:3551-3570 | Msa1396610:CDS | 30.0% | |
TTGGATGTGTAAATGTGTTT+GGG | - | tig0022059:3552-3571 | Msa1396610:CDS | 30.0% | |
CTAGGTTAAGAATTGCAATA+TGG | - | tig0022059:3641-3660 | Msa1396610:CDS | 30.0% | |
AAGAATTGCAATATGGGAAT+TGG | - | tig0022059:3648-3667 | Msa1396610:CDS | 30.0% | |
TCAGATAAGTGTGTATGTAT+AGG | + | tig0022059:3950-3969 | None:intergenic | 30.0% | |
ATACACACTTATCTGATAAG+CGG | - | tig0022059:3954-3973 | Msa1396610:intron | 30.0% | |
AAGGATATATCAGAAAATGG+CGG | - | tig0022059:4186-4205 | Msa1396610:intron | 30.0% | |
ATACCTATCATCCTTAAACT+TGG | + | tig0022059:4227-4246 | None:intergenic | 30.0% | |
!!! | TGATAGGTATCGATTTTGTA+AGG | - | tig0022059:4237-4256 | Msa1396610:intron | 30.0% |
!!! | AGGAGAATTTTGAGTTTATG+TGG | - | tig0022059:4257-4276 | Msa1396610:intron | 30.0% |
!!! | GGAGAATTTTGAGTTTATGT+GGG | - | tig0022059:4258-4277 | Msa1396610:intron | 30.0% |
!! | TTCTCAACTTTAAAGTCCAT+TGG | - | tig0022059:4295-4314 | Msa1396610:intron | 30.0% |
!! | TCTCAACTTTAAAGTCCATT+GGG | - | tig0022059:4296-4315 | Msa1396610:intron | 30.0% |
! | TGAAGCAAGACTAATTTTCT+GGG | + | tig0022059:4536-4555 | None:intergenic | 30.0% |
GTATTGAATATTCTTCGAGA+TGG | - | tig0022059:4976-4995 | Msa1396610:intron | 30.0% | |
AATTAAATCCACATCTTGAG+GGG | + | tig0022059:5214-5233 | None:intergenic | 30.0% | |
GAATTAAATCCACATCTTGA+GGG | + | tig0022059:5215-5234 | None:intergenic | 30.0% | |
TTCCTTCAGCATTTCAAATT+CGG | - | tig0022059:5352-5371 | Msa1396610:CDS | 30.0% | |
TAAACTTTCCAAAACATCCA+AGG | + | tig0022059:5634-5653 | None:intergenic | 30.0% | |
! | TGCTTTTCAAATCAGATAAC+TGG | + | tig0022059:5761-5780 | None:intergenic | 30.0% |
CAGTGAAGAATTAGAAGAAA+AGG | - | tig0022059:6022-6041 | Msa1396610:CDS | 30.0% | |
TTACTCTTGACATTAATCCT+TGG | - | tig0022059:6351-6370 | Msa1396610:CDS | 30.0% | |
AGATGTGCTTTCTTTAACAA+CGG | - | tig0022059:6376-6395 | Msa1396610:CDS | 30.0% | |
TTTGGGGATGAAAGTTAAAA+GGG | - | tig0022059:6440-6459 | Msa1396610:CDS | 30.0% | |
CTAATTGATATGCAATGCAA+TGG | + | tig0022059:6478-6497 | None:intergenic | 30.0% | |
AATGATAACTGAGTAAGTAG+AGG | + | tig0022059:6548-6567 | None:intergenic | 30.0% | |
TCTACTTACTCAGTTATCAT+TGG | - | tig0022059:6547-6566 | Msa1396610:CDS | 30.0% | |
AAACAATGAATCTAAGGATC+TGG | + | tig0022059:6674-6693 | None:intergenic | 30.0% | |
AGATCCTTAGATTCATTGTT+TGG | - | tig0022059:6673-6692 | Msa1396610:CDS | 30.0% | |
ATTTATTTAGAAAAACGGGG+TGG | + | tig0022059:6851-6870 | None:intergenic | 30.0% | |
TATTGCTTTCTAATACTTGC+TGG | - | tig0022059:7034-7053 | Msa1396610:intron | 30.0% | |
ATTGCTTTCTAATACTTGCT+GGG | - | tig0022059:7035-7054 | Msa1396610:intron | 30.0% | |
!! | GGGATTTATTTTTCATAAGC+TGG | - | tig0022059:7103-7122 | Msa1396610:intron | 30.0% |
AAAAATGTATCTGCATGTGT+CGG | + | tig0022059:7298-7317 | None:intergenic | 30.0% | |
ACTAAAATAGACACAGACAT+CGG | + | tig0022059:7346-7365 | None:intergenic | 30.0% | |
ACACCTTTGGATATATACAT+AGG | + | tig0022059:7666-7685 | None:intergenic | 30.0% | |
AGTTTGAATCAATTATGGCA+CGG | + | tig0022059:7704-7723 | None:intergenic | 30.0% | |
TTGATTCAAACTTGCAAGTA+AGG | - | tig0022059:7712-7731 | Msa1396610:intron | 30.0% | |
ATACTTATCTCTGTGACTTA+TGG | + | tig0022059:7826-7845 | None:intergenic | 30.0% | |
TCGAATTCTAATCTCAGTAA+AGG | - | tig0022059:7974-7993 | Msa1396610:CDS | 30.0% | |
GTTGTAATATTTGTGGTGAT+AGG | + | tig0022059:8087-8106 | None:intergenic | 30.0% | |
AGCTTTCGTTGTAATATTTG+TGG | + | tig0022059:8094-8113 | None:intergenic | 30.0% | |
GTCATACTCATACTACAAAA+TGG | + | tig0022059:8272-8291 | None:intergenic | 30.0% | |
!! | GACATAACTTTTGATGACAT+TGG | - | tig0022059:8319-8338 | Msa1396610:CDS | 30.0% |
AAGGAGAAGTTTCTTGTTCT+CGG | + | tig0022059:3026-3045 | None:intergenic | 35.0% | |
! | TTTATGTGTTAGGGCTTGTT+TGG | - | tig0022059:3361-3380 | Msa1396610:CDS | 35.0% |
TATTGGAGTTCCAAATTGAC+CGG | - | tig0022059:3518-3537 | Msa1396610:CDS | 35.0% | |
AAAGTTAGCTCAAACGATGA+CGG | + | tig0022059:3581-3600 | None:intergenic | 35.0% | |
! | TCATCGTTTGAGCTAACTTT+TGG | - | tig0022059:3581-3600 | Msa1396610:CDS | 35.0% |
! | CATCGTTTGAGCTAACTTTT+GGG | - | tig0022059:3582-3601 | Msa1396610:CDS | 35.0% |
GCAATATGGGAATTGGATTA+AGG | - | tig0022059:3655-3674 | Msa1396610:CDS | 35.0% | |
!! | GATGGGTATTGAAGTTGTAT+TGG | - | tig0022059:3693-3712 | Msa1396610:CDS | 35.0% |
AAAGTTAGCTCAAAGGATGA+GGG | + | tig0022059:3771-3790 | None:intergenic | 35.0% | |
AAAAGTTAGCTCAAAGGATG+AGG | + | tig0022059:3772-3791 | None:intergenic | 35.0% | |
! | TCATCCTTTGAGCTAACTTT+TGG | - | tig0022059:3771-3790 | Msa1396610:intron | 35.0% |
! | CATCCTTTGAGCTAACTTTT+GGG | - | tig0022059:3772-3791 | Msa1396610:intron | 35.0% |
TATGCTATCATGTAGAGCTT+TGG | + | tig0022059:3858-3877 | None:intergenic | 35.0% | |
!!! | TGAGTGATTTTTGGGTTTTG+AGG | - | tig0022059:4049-4068 | Msa1396610:CDS | 35.0% |
!! | AAATCAGCTCTAGGTAACAA+TGG | + | tig0022059:4125-4144 | None:intergenic | 35.0% |
TATTCTTCTCAGCTGAGATA+TGG | - | tig0022059:4160-4179 | Msa1396610:intron | 35.0% | |
ATTCTTCTCAGCTGAGATAT+GGG | - | tig0022059:4161-4180 | Msa1396610:intron | 35.0% | |
GCCAAGGATATATCAGAAAA+TGG | - | tig0022059:4183-4202 | Msa1396610:intron | 35.0% | |
!! | GCCATTTTCTGATATATCCT+TGG | + | tig0022059:4187-4206 | None:intergenic | 35.0% |
AGGATATATCAGAAAATGGC+GGG | - | tig0022059:4187-4206 | Msa1396610:intron | 35.0% | |
TTAAACTTGGCAGCTACATT+TGG | + | tig0022059:4214-4233 | None:intergenic | 35.0% | |
AAATGTAGCTGCCAAGTTTA+AGG | - | tig0022059:4213-4232 | Msa1396610:intron | 35.0% | |
!! | CTTTAAAGTTGAGAAGTCAG+TGG | + | tig0022059:4290-4309 | None:intergenic | 35.0% |
!!! | GCACTCAACCTCATTTTTTT+GGG | - | tig0022059:4318-4337 | Msa1396610:intron | 35.0% |
TTCAAATTCTCTCTGTAGAG+CGG | + | tig0022059:4388-4407 | None:intergenic | 35.0% | |
GAATTTGAAGGATCTAAGTC+TGG | - | tig0022059:4399-4418 | Msa1396610:intron | 35.0% | |
GATTCCAAGTTACCTTATGA+GGG | - | tig0022059:4481-4500 | Msa1396610:intron | 35.0% | |
AATTGGAAAAGACCCTCATA+AGG | + | tig0022059:4496-4515 | None:intergenic | 35.0% | |
! | CTGAAGCAAGACTAATTTTC+TGG | + | tig0022059:4537-4556 | None:intergenic | 35.0% |
!! | TGATGAGTTGATTGACTTGT+TGG | - | tig0022059:4561-4580 | Msa1396610:intron | 35.0% |
!! | TTTTAGAGGCTCATAACAAG+TGG | + | tig0022059:4644-4663 | None:intergenic | 35.0% |
!! | ATGAGCCTCTAAAATATGTG+AGG | - | tig0022059:4650-4669 | Msa1396610:intron | 35.0% |
!! | TGAGTCCTCACATATTTTAG+AGG | + | tig0022059:4658-4677 | None:intergenic | 35.0% |
AAGGCAATAAATCTTTGACG+GGG | + | tig0022059:4779-4798 | None:intergenic | 35.0% | |
CAAGGCAATAAATCTTTGAC+GGG | + | tig0022059:4780-4799 | None:intergenic | 35.0% | |
CCAAGGCAATAAATCTTTGA+CGG | + | tig0022059:4781-4800 | None:intergenic | 35.0% | |
! | ATGATTTGAGGTTTCAAGCT+CGG | + | tig0022059:4806-4825 | None:intergenic | 35.0% |
ATGCTTTACCACATGATTTG+AGG | + | tig0022059:4818-4837 | None:intergenic | 35.0% | |
!! | TCATGTGGTAAAGCATTTTG+CGG | - | tig0022059:4822-4841 | Msa1396610:intron | 35.0% |
TTACATTTGTCGAAGAGGAT+TGG | - | tig0022059:4869-4888 | Msa1396610:intron | 35.0% | |
GTGATTGAGATTGCATTGTT+TGG | + | tig0022059:4904-4923 | None:intergenic | 35.0% | |
TGAAAAAGGGAATGTTCTCA+AGG | - | tig0022059:4926-4945 | Msa1396610:intron | 35.0% | |
GGAATTAAATCCACATCTTG+AGG | + | tig0022059:5216-5235 | None:intergenic | 35.0% | |
TCAGAGGTGATTTCAATATC+TGG | + | tig0022059:5237-5256 | None:intergenic | 35.0% | |
GATATTGAAATCACCTCTGA+TGG | - | tig0022059:5237-5256 | Msa1396610:CDS | 35.0% | |
! | ATAGACTACTGTTTCTCAGA+TGG | - | tig0022059:5261-5280 | Msa1396610:CDS | 35.0% |
! | TACTGTTTCTCAGATGGTAT+TGG | - | tig0022059:5267-5286 | Msa1396610:CDS | 35.0% |
! | AAATTTCACAGTCTTTTGCC+AGG | - | tig0022059:5292-5311 | Msa1396610:CDS | 35.0% |
! | TACCGAATTTGAAATGCTGA+AGG | + | tig0022059:5357-5376 | None:intergenic | 35.0% |
TCAGCATTTCAAATTCGGTA+TGG | - | tig0022059:5357-5376 | Msa1396610:CDS | 35.0% | |
!! | ATTCGGTATGGTGGATATAA+AGG | - | tig0022059:5369-5388 | Msa1396610:CDS | 35.0% |
CTCATCTTTAATTCCTAAGG+TGG | + | tig0022059:5544-5563 | None:intergenic | 35.0% | |
CACCTTAGGAATTAAAGATG+AGG | - | tig0022059:5542-5561 | Msa1396610:CDS | 35.0% | |
!! | AATTAAAGATGAGGCGCTTT+TGG | - | tig0022059:5551-5570 | Msa1396610:CDS | 35.0% |
! | AGGAAAGATGTTGACTGATA+AGG | - | tig0022059:5602-5621 | Msa1396610:CDS | 35.0% |
!! | CATAGGTTTTATGAGCCAAA+CGG | - | tig0022059:5693-5712 | Msa1396610:CDS | 35.0% |
TTGAGCATCATTGATAGGTA+AGG | + | tig0022059:5723-5742 | None:intergenic | 35.0% | |
TTACCTATCAATGATGCTCA+AGG | - | tig0022059:5722-5741 | Msa1396610:CDS | 35.0% | |
! | TAGTTTTTGCCACAGTTATG+CGG | + | tig0022059:5869-5888 | None:intergenic | 35.0% |
CATAACTGTGGCAAAAACTA+AGG | - | tig0022059:5869-5888 | Msa1396610:CDS | 35.0% | |
AGATGAAAACTTAAGGAACG+TGG | - | tig0022059:5902-5921 | Msa1396610:CDS | 35.0% | |
GATAGCACACGTATTATAGT+AGG | - | tig0022059:5933-5952 | Msa1396610:CDS | 35.0% | |
CACACGTATTATAGTAGGTA+AGG | - | tig0022059:5938-5957 | Msa1396610:CDS | 35.0% | |
ACGTATTATAGTAGGTAAGG+TGG | - | tig0022059:5941-5960 | Msa1396610:CDS | 35.0% | |
AATTAGAAGAAAAGGGCTTG+AGG | - | tig0022059:6030-6049 | Msa1396610:CDS | 35.0% | |
ATTAGAAGAAAAGGGCTTGA+GGG | - | tig0022059:6031-6050 | Msa1396610:CDS | 35.0% | |
TGCCTTGTATTTCCACAAAA+AGG | - | tig0022059:6056-6075 | Msa1396610:CDS | 35.0% | |
! | GTCCTTTTTGTGGAAATACA+AGG | + | tig0022059:6061-6080 | None:intergenic | 35.0% |
TATTTCCACAAAAAGGACCT+AGG | - | tig0022059:6063-6082 | Msa1396610:CDS | 35.0% | |
GGACCTAGGTATGTATATAA+TGG | - | tig0022059:6077-6096 | Msa1396610:CDS | 35.0% | |
! | AAACATCTTGTGACGACTTT+TGG | - | tig0022059:6191-6210 | Msa1396610:CDS | 35.0% |
ATCATGCACCAACAAAAGAA+GGG | - | tig0022059:6409-6428 | Msa1396610:CDS | 35.0% | |
! | CTTTGGGGATGAAAGTTAAA+AGG | - | tig0022059:6439-6458 | Msa1396610:CDS | 35.0% |
TGGCTATGCAAAACAATCTT+AGG | - | tig0022059:6567-6586 | Msa1396610:CDS | 35.0% | |
GGCTATGCAAAACAATCTTA+GGG | - | tig0022059:6568-6587 | Msa1396610:CDS | 35.0% | |
GCTATGCAAAACAATCTTAG+GGG | - | tig0022059:6569-6588 | Msa1396610:CDS | 35.0% | |
ATGAGGACAGCAAAACTTAA+GGG | + | tig0022059:6643-6662 | None:intergenic | 35.0% | |
TCCTTAGATTCATTGTTTGG+TGG | - | tig0022059:6676-6695 | Msa1396610:CDS | 35.0% | |
TCCACCAAACAATGAATCTA+AGG | + | tig0022059:6680-6699 | None:intergenic | 35.0% | |
TGGAAGCCTAATATCTAACA+AGG | + | tig0022059:6742-6761 | None:intergenic | 35.0% | |
!!! | ACTTTTATGAGTGTTGGTAC+TGG | - | tig0022059:6775-6794 | Msa1396610:CDS | 35.0% |
! | TTGGATTTTCAGTTTGAGCT+GGG | + | tig0022059:7143-7162 | None:intergenic | 35.0% |
! | ATTGGATTTTCAGTTTGAGC+TGG | + | tig0022059:7144-7163 | None:intergenic | 35.0% |
AGCTCAAACTGAAAATCCAA+TGG | - | tig0022059:7143-7162 | Msa1396610:intron | 35.0% | |
CAAGTACAAAGTATGCAACT+TGG | + | tig0022059:7231-7250 | None:intergenic | 35.0% | |
GCAACAGCAACAAACATATA+AGG | + | tig0022059:7405-7424 | None:intergenic | 35.0% | |
TCTCTTGGTTTCAAAGATCT+TGG | + | tig0022059:7612-7631 | None:intergenic | 35.0% | |
ATGAAATCTGGAAACTCTCT+TGG | + | tig0022059:7627-7646 | None:intergenic | 35.0% | |
AAGAGAGTTTCCAGATTTCA+TGG | - | tig0022059:7626-7645 | Msa1396610:intron | 35.0% | |
! | GAGTTTTCCTAATACACCTT+TGG | + | tig0022059:7679-7698 | None:intergenic | 35.0% |
ATCTCTTTGATGAGCTTCTA+TGG | - | tig0022059:7858-7877 | Msa1396610:CDS | 35.0% | |
!! | GCCATAAGTTGATATTCATG+CGG | + | tig0022059:8044-8063 | None:intergenic | 35.0% |
CCATGGAAAGCTTAAAAAAG+TGG | + | tig0022059:8117-8136 | None:intergenic | 35.0% | |
!!! | CCACTTTTTTAAGCTTTCCA+TGG | - | tig0022059:8114-8133 | Msa1396610:CDS | 35.0% |
! | TTAAGCTTTCCATGGATTGT+CGG | - | tig0022059:8122-8141 | Msa1396610:CDS | 35.0% |
TGTAAAAGCTATTATGGGAC+AGG | + | tig0022059:8185-8204 | None:intergenic | 35.0% | |
GAGTATGACATGTTCATCTA+CGG | - | tig0022059:8283-8302 | Msa1396610:CDS | 35.0% | |
AGTATGACATGTTCATCTAC+GGG | - | tig0022059:8284-8303 | Msa1396610:CDS | 35.0% | |
TGAAGGAATCACCATGGTTA+GGG | + | tig0022059:2801-2820 | None:intergenic | 40.0% | |
ATGAAGGAATCACCATGGTT+AGG | + | tig0022059:2802-2821 | None:intergenic | 40.0% | |
GATGGGAAAACCAGCATAAA+GGG | + | tig0022059:3134-3153 | None:intergenic | 40.0% | |
!!! | CTTTATGCTGGTTTTCCCAT+CGG | - | tig0022059:3133-3152 | Msa1396610:CDS | 40.0% |
CATGAGTGTGCTTCAATCAT+GGG | - | tig0022059:3165-3184 | Msa1396610:CDS | 40.0% | |
AAATCAAGTCTCTGCCTTTC+AGG | + | tig0022059:3214-3233 | None:intergenic | 40.0% | |
AAAGGCAGAGACTTGATTTC+TGG | - | tig0022059:3215-3234 | Msa1396610:CDS | 40.0% | |
AAGGCAGAGACTTGATTTCT+GGG | - | tig0022059:3216-3235 | Msa1396610:CDS | 40.0% | |
! | GATGGGTATTGTTCTGATGA+AGG | - | tig0022059:3298-3317 | Msa1396610:CDS | 40.0% |
AAGTTAGCTCAAACGATGAC+GGG | + | tig0022059:3580-3599 | None:intergenic | 40.0% | |
CATCCCAAAAGTTAGCTCAA+AGG | + | tig0022059:3588-3607 | None:intergenic | 40.0% | |
CATAAAGGGAAATCAGCTCT+AGG | + | tig0022059:4134-4153 | None:intergenic | 40.0% | |
GGATATATCAGAAAATGGCG+GGG | - | tig0022059:4188-4207 | Msa1396610:intron | 40.0% | |
CTGCCAAGTTTAAGGATGAT+AGG | - | tig0022059:4221-4240 | Msa1396610:intron | 40.0% | |
!!! | GGCACTCAACCTCATTTTTT+TGG | - | tig0022059:4317-4336 | Msa1396610:intron | 40.0% |
TCAAATTCTCTCTGTAGAGC+GGG | + | tig0022059:4387-4406 | None:intergenic | 40.0% | |
GCTCTACAGAGAGAATTTGA+AGG | - | tig0022059:4387-4406 | Msa1396610:intron | 40.0% | |
AAGGATCTAAGTCTGGAAGA+TGG | - | tig0022059:4406-4425 | Msa1396610:intron | 40.0% | |
GGATTCCAAGTTACCTTATG+AGG | - | tig0022059:4480-4499 | Msa1396610:intron | 40.0% | |
AAGACCCTCATAAGGTAACT+TGG | + | tig0022059:4488-4507 | None:intergenic | 40.0% | |
!! | GATTGACTTGTTGGTAAGCT+TGG | - | tig0022059:4570-4589 | Msa1396610:intron | 40.0% |
AAGCTTGGATGCAGAAACTA+AGG | - | tig0022059:4585-4604 | Msa1396610:intron | 40.0% | |
TTCTCCCATCGCAACAAAAA+AGG | - | tig0022059:4710-4729 | Msa1396610:intron | 40.0% | |
!!! | CCAACCTTTTTTGTTGCGAT+GGG | + | tig0022059:4717-4736 | None:intergenic | 40.0% |
!!! | ACCAACCTTTTTTGTTGCGA+TGG | + | tig0022059:4718-4737 | None:intergenic | 40.0% |
ATCGCAACAAAAAAGGTTGG+TGG | - | tig0022059:4717-4736 | Msa1396610:intron | 40.0% | |
AATCTTTGACGGGGTAATCA+AGG | + | tig0022059:4770-4789 | None:intergenic | 40.0% | |
CCGTCAAAGATTTATTGCCT+TGG | - | tig0022059:4778-4797 | Msa1396610:intron | 40.0% | |
! | TGATTTGAGGTTTCAAGCTC+GGG | + | tig0022059:4805-4824 | None:intergenic | 40.0% |
GCTTGAAACCTCAAATCATG+TGG | - | tig0022059:4807-4826 | Msa1396610:intron | 40.0% | |
CATATGCTTCAGACTTCATG+AGG | - | tig0022059:4845-4864 | Msa1396610:intron | 40.0% | |
GAGGATTACATTTGTCGAAG+AGG | - | tig0022059:4864-4883 | Msa1396610:intron | 40.0% | |
AACTGCGGTCAAATTCTGTT+TGG | - | tig0022059:5049-5068 | Msa1396610:intron | 40.0% | |
AAGCAGCAGATATCAGAGAA+TGG | - | tig0022059:5097-5116 | Msa1396610:intron | 40.0% | |
AGCAGATATCAGAGAATGGA+TGG | - | tig0022059:5101-5120 | Msa1396610:intron | 40.0% | |
GCAGATATCAGAGAATGGAT+GGG | - | tig0022059:5102-5121 | Msa1396610:intron | 40.0% | |
TTCCAAATGTGCAGCAAGAA+TGG | - | tig0022059:5149-5168 | Msa1396610:CDS | 40.0% | |
TCCAAATGTGCAGCAAGAAT+GGG | - | tig0022059:5150-5169 | Msa1396610:CDS | 40.0% | |
!! | GTCCAGGCAAACTTTTGAAA+TGG | - | tig0022059:5188-5207 | Msa1396610:CDS | 40.0% |
ACAGTAGTCTATACCATCAG+AGG | + | tig0022059:5253-5272 | None:intergenic | 40.0% | |
GCATTTCAAATTCGGTATGG+TGG | - | tig0022059:5360-5379 | Msa1396610:CDS | 40.0% | |
!! | GACGCAAAGCATTCTGTTTT+TGG | + | tig0022059:5463-5482 | None:intergenic | 40.0% |
GAATGCTTTGCGTCACTAAA+TGG | - | tig0022059:5469-5488 | Msa1396610:CDS | 40.0% | |
ATCTCTCGATTGAGAAAGCA+CGG | + | tig0022059:5507-5526 | None:intergenic | 40.0% | |
AATTCCTAAGGTGGACAACA+GGG | + | tig0022059:5535-5554 | None:intergenic | 40.0% | |
TAATTCCTAAGGTGGACAAC+AGG | + | tig0022059:5536-5555 | None:intergenic | 40.0% | |
CGCCTCATCTTTAATTCCTA+AGG | + | tig0022059:5547-5566 | None:intergenic | 40.0% | |
TTCTAGTCAAGATGCTGCAT+AGG | - | tig0022059:5676-5695 | Msa1396610:CDS | 40.0% | |
!! | GAGACTGGTCTATTGAACTA+TGG | - | tig0022059:5831-5850 | Msa1396610:CDS | 40.0% |
CAGTTATGCGGACAAATACT+TGG | + | tig0022059:5857-5876 | None:intergenic | 40.0% | |
AGTATTTGTCCGCATAACTG+TGG | - | tig0022059:5857-5876 | Msa1396610:CDS | 40.0% | |
GAAAACTTAAGGAACGTGGA+TGG | - | tig0022059:5906-5925 | Msa1396610:CDS | 40.0% | |
! | ACATACCTAGGTCCTTTTTG+TGG | + | tig0022059:6071-6090 | None:intergenic | 40.0% |
! | AAAGAAAGCACATCTGACCA+AGG | + | tig0022059:6371-6390 | None:intergenic | 40.0% |
CATCATGCACCAACAAAAGA+AGG | - | tig0022059:6408-6427 | Msa1396610:CDS | 40.0% | |
TCATGCACCAACAAAAGAAG+GGG | - | tig0022059:6410-6429 | Msa1396610:CDS | 40.0% | |
! | AAAAGAAGGGGGCATATCTT+TGG | - | tig0022059:6422-6441 | Msa1396610:CDS | 40.0% |
! | AAAGAAGGGGGCATATCTTT+GGG | - | tig0022059:6423-6442 | Msa1396610:CDS | 40.0% |
AGTTAAAAGGGCCATTAGCT+AGG | - | tig0022059:6452-6471 | Msa1396610:CDS | 40.0% | |
CATGAGGACAGCAAAACTTA+AGG | + | tig0022059:6644-6663 | None:intergenic | 40.0% | |
TTAGAAAAACGGGGTGGATA+AGG | + | tig0022059:6845-6864 | None:intergenic | 40.0% | |
GTAGACTAGGAAAACACAAC+AGG | - | tig0022059:6910-6929 | Msa1396610:CDS | 40.0% | |
ACACAACAGGTTATTGCATG+AGG | - | tig0022059:6923-6942 | Msa1396610:CDS | 40.0% | |
CACAACAGGTTATTGCATGA+GGG | - | tig0022059:6924-6943 | Msa1396610:CDS | 40.0% | |
ACAACAGGTTATTGCATGAG+GGG | - | tig0022059:6925-6944 | Msa1396610:CDS | 40.0% | |
!! | GAAAATCCAATGGACTACAC+AGG | - | tig0022059:7153-7172 | Msa1396610:intron | 40.0% |
ACCTTATGGTCCATTATACG+AGG | + | tig0022059:7186-7205 | None:intergenic | 40.0% | |
TTACCTCTAGTGTCACCTTA+TGG | + | tig0022059:7200-7219 | None:intergenic | 40.0% | |
AAAATAGACACAGACATCGG+TGG | + | tig0022059:7343-7362 | None:intergenic | 40.0% | |
! | TATGTTTGTTGCTGTTGCGT+AGG | - | tig0022059:7407-7426 | Msa1396610:intron | 40.0% |
! | CTCCAGACATTTTCTACTCT+TGG | + | tig0022059:7529-7548 | None:intergenic | 40.0% |
! | GAGTAGAAAATGTCTGGAGT+TGG | - | tig0022059:7530-7549 | Msa1396610:intron | 40.0% |
CTTTGCAAAATCAACTGCCA+TGG | + | tig0022059:7568-7587 | None:intergenic | 40.0% | |
!! | GCAGTTGATTTTGCAAAGAC+TGG | - | tig0022059:7570-7589 | Msa1396610:intron | 40.0% |
AAAGATCTTGGCATTTCTGC+AGG | + | tig0022059:7600-7619 | None:intergenic | 40.0% | |
AGTTTCCAGATTTCATGGAG+AGG | - | tig0022059:7631-7650 | Msa1396610:intron | 40.0% | |
TCAAACCTCTCCATGAAATC+TGG | + | tig0022059:7639-7658 | None:intergenic | 40.0% | |
CTGGTGATCATATGCTTCTT+TGG | + | tig0022059:7766-7785 | None:intergenic | 40.0% | |
CAAAACCATCAACTTCAAGC+TGG | + | tig0022059:7785-7804 | None:intergenic | 40.0% | |
!!! | GCTTGAAGTTGATGGTTTTG+AGG | - | tig0022059:7785-7804 | Msa1396610:intron | 40.0% |
CTTATCTCTGTGACTTATGG+CGG | + | tig0022059:7823-7842 | None:intergenic | 40.0% | |
ACTGAGGATGAAATGCTAAC+TGG | - | tig0022059:7888-7907 | Msa1396610:CDS | 40.0% | |
CTTATTTGCAGAGGGATAAC+AGG | - | tig0022059:7931-7950 | Msa1396610:CDS | 40.0% | |
TTCAGCTGGAAGCTAAAGAA+TGG | - | tig0022059:8000-8019 | Msa1396610:CDS | 40.0% | |
GCCGCATGAATATCAACTTA+TGG | - | tig0022059:8040-8059 | Msa1396610:CDS | 40.0% | |
ATCAACTTATGGCATCTGCA+TGG | - | tig0022059:8051-8070 | Msa1396610:CDS | 40.0% | |
ATTTGTGGTGATAGGTCACA+TGG | + | tig0022059:8079-8098 | None:intergenic | 40.0% | |
AAAATGTCACCGACAATCCA+TGG | + | tig0022059:8134-8153 | None:intergenic | 40.0% | |
AAAGCTATTATGGGACAGGA+GGG | + | tig0022059:8181-8200 | None:intergenic | 40.0% | |
AAAAGCTATTATGGGACAGG+AGG | + | tig0022059:8182-8201 | None:intergenic | 40.0% | |
TTCGGATGAAGGAATCACCA+TGG | + | tig0022059:2807-2826 | None:intergenic | 45.0% | |
GAAGATTTCGAGAGCGAAGA+CGG | + | tig0022059:2918-2937 | None:intergenic | 45.0% | |
TACACCAACTGGAAATCTCG+CGG | - | tig0022059:2944-2963 | Msa1396610:three_prime_UTR | 45.0% | |
AGGCCTAGGAATGATGTCAT+CGG | + | tig0022059:3080-3099 | None:intergenic | 45.0% | |
!! | AAAGGGCACCATTGTTGATG+CGG | + | tig0022059:3117-3136 | None:intergenic | 45.0% |
AACAATGGTGCCCTTTATGC+TGG | - | tig0022059:3121-3140 | Msa1396610:CDS | 45.0% | |
CGATGGGAAAACCAGCATAA+AGG | + | tig0022059:3135-3154 | None:intergenic | 45.0% | |
TGAAGCACACTCATGCAATC+AGG | + | tig0022059:3160-3179 | None:intergenic | 45.0% | |
GCATGAGTGTGCTTCAATCA+TGG | - | tig0022059:3164-3183 | Msa1396610:CDS | 45.0% | |
AGTGTGCTTCAATCATGGGA+AGG | - | tig0022059:3169-3188 | Msa1396610:CDS | 45.0% | |
! | ACTTGATTTCTGGGTCACTC+AGG | - | tig0022059:3225-3244 | Msa1396610:CDS | 45.0% |
! | CTTGATTTCTGGGTCACTCA+GGG | - | tig0022059:3226-3245 | Msa1396610:CDS | 45.0% |
! | GTGTTAGGGCTTGTTTGGAT+TGG | - | tig0022059:3366-3385 | Msa1396610:CDS | 45.0% |
!! | TCCAAATTGACCGGCTTTTC+AGG | - | tig0022059:3527-3546 | Msa1396610:CDS | 45.0% |
ACATCCAAAGCCTGAAAAGC+CGG | + | tig0022059:3540-3559 | None:intergenic | 45.0% | |
ATTAAGGACTCACGTCGTTG+AGG | - | tig0022059:3671-3690 | Msa1396610:CDS | 45.0% | |
AAATGAGGTTGAGTGCCCAA+TGG | + | tig0022059:4314-4333 | None:intergenic | 45.0% | |
ACAAGCGGAACTGTTTCAGT+TGG | + | tig0022059:4448-4467 | None:intergenic | 45.0% | |
TCCAAACGACACTTGACAAG+CGG | + | tig0022059:4463-4482 | None:intergenic | 45.0% | |
CCCATCGCAACAAAAAAGGT+TGG | - | tig0022059:4714-4733 | Msa1396610:intron | 45.0% | |
CTTCGAGATGGGATTCTAGT+TGG | - | tig0022059:4988-5007 | Msa1396610:intron | 45.0% | |
CTGCACATTTGGAAACACTG+CGG | + | tig0022059:5143-5162 | None:intergenic | 45.0% | |
ACCCATTCTTGCTGCACATT+TGG | + | tig0022059:5154-5173 | None:intergenic | 45.0% | |
GGCCATTTCAAAAGTTTGCC+TGG | + | tig0022059:5193-5212 | None:intergenic | 45.0% | |
! | TAGCTTTTCTGCAAGTTGCC+TGG | + | tig0022059:5313-5332 | None:intergenic | 45.0% |
ATATCCCTGTTGTCCACCTT+AGG | - | tig0022059:5528-5547 | Msa1396610:CDS | 45.0% | |
GAGCCTTGAGCATCATTGAT+AGG | + | tig0022059:5728-5747 | None:intergenic | 45.0% | |
ATGCCGAATATTTGTGCCCA+AGG | - | tig0022059:5782-5801 | Msa1396610:CDS | 45.0% | |
TGCCGAATATTTGTGCCCAA+GGG | - | tig0022059:5783-5802 | Msa1396610:CDS | 45.0% | |
AAAAACCCTTGTCTTCACCC+AGG | - | tig0022059:5972-5991 | Msa1396610:CDS | 45.0% | |
TATCTCCTGGGTGAAGACAA+GGG | + | tig0022059:5980-5999 | None:intergenic | 45.0% | |
ATATCTCCTGGGTGAAGACA+AGG | + | tig0022059:5981-6000 | None:intergenic | 45.0% | |
CAAGGACTCTGATATCTCCT+GGG | + | tig0022059:5992-6011 | None:intergenic | 45.0% | |
TCAAGGACTCTGATATCTCC+TGG | + | tig0022059:5993-6012 | None:intergenic | 45.0% | |
CTTCACTGTAGACAGCATCA+AGG | + | tig0022059:6010-6029 | None:intergenic | 45.0% | |
CATGCACCAACAAAAGAAGG+GGG | - | tig0022059:6411-6430 | Msa1396610:CDS | 45.0% | |
! | GATATGCCCCCTTCTTTTGT+TGG | + | tig0022059:6420-6439 | None:intergenic | 45.0% |
! | AAGAAGGGGGCATATCTTTG+GGG | - | tig0022059:6424-6443 | Msa1396610:CDS | 45.0% |
CAATGCAATGGCCTAGCTAA+TGG | + | tig0022059:6466-6485 | None:intergenic | 45.0% | |
AGGATCTGGTTATGTGCATG+AGG | + | tig0022059:6660-6679 | None:intergenic | 45.0% | |
! | CTAATACTTGCTGGGTCTAC+AGG | - | tig0022059:7043-7062 | Msa1396610:intron | 45.0% |
CTTCTTCCTGTGTAGTCCAT+TGG | + | tig0022059:7162-7181 | None:intergenic | 45.0% | |
!! | CAATGGACTACACAGGAAGA+AGG | - | tig0022059:7160-7179 | Msa1396610:intron | 45.0% |
AGGAAGAAGGCCTCGTATAA+TGG | - | tig0022059:7173-7192 | Msa1396610:intron | 45.0% | |
!! | GCCTCGTATAATGGACCATA+AGG | - | tig0022059:7182-7201 | Msa1396610:intron | 45.0% |
GTCAGCATGAACCAAATGTG+CGG | + | tig0022059:7490-7509 | None:intergenic | 45.0% | |
!! | TCTTGGCCTTATCGTGTTCA+CGG | + | tig0022059:7512-7531 | None:intergenic | 45.0% |
GGCCAAGAGTAGAAAATGTC+TGG | - | tig0022059:7524-7543 | Msa1396610:intron | 45.0% | |
GATCACCAGCTTGAAGTTGA+TGG | - | tig0022059:7777-7796 | Msa1396610:intron | 45.0% | |
CAGAGGGATAACAGGAGATA+CGG | - | tig0022059:7939-7958 | Msa1396610:CDS | 45.0% | |
CAGGAGATACGGAGATATGA+AGG | - | tig0022059:7950-7969 | Msa1396610:CDS | 45.0% | |
CTCAGTAAAGGATCTTCAGC+TGG | - | tig0022059:7986-8005 | Msa1396610:CDS | 45.0% | |
AAGCTATTATGGGACAGGAG+GGG | + | tig0022059:8180-8199 | None:intergenic | 45.0% | |
TTCATCTACGGGTAGCACTT+GGG | - | tig0022059:8295-8314 | Msa1396610:CDS | 45.0% | |
!!! | ATCTAAATAATTTATTTTAA+GGG | - | tig0022059:8384-8403 | Msa1396610:exon | 5.0% |
!! | TGGTTTCGAGGTATCGGAGA+AGG | + | tig0022059:2880-2899 | None:intergenic | 50.0% |
CAACGGTGGTTTCGAGGTAT+CGG | + | tig0022059:2886-2905 | None:intergenic | 50.0% | |
TCTTCAGCGACTACACCAAC+TGG | - | tig0022059:2933-2952 | Msa1396610:three_prime_UTR | 50.0% | |
TACTCCGCGAGATTTCCAGT+TGG | + | tig0022059:2951-2970 | None:intergenic | 50.0% | |
AACTGGAAATCTCGCGGAGT+AGG | - | tig0022059:2950-2969 | Msa1396610:three_prime_UTR | 50.0% | |
CCAACGTCTCGAACTGAACA+CGG | + | tig0022059:2976-2995 | None:intergenic | 50.0% | |
CTTGTTCTCGGCGAGAGTTA+GGG | + | tig0022059:3014-3033 | None:intergenic | 50.0% | |
TCTTGTTCTCGGCGAGAGTT+AGG | + | tig0022059:3015-3034 | None:intergenic | 50.0% | |
GACAGAGGAAATGGGAGCTA+AGG | + | tig0022059:3045-3064 | None:intergenic | 50.0% | |
! | AGCGTCGAGACAGAGGAAAT+GGG | + | tig0022059:3053-3072 | None:intergenic | 50.0% |
!! | AAGCGTCGAGACAGAGGAAA+TGG | + | tig0022059:3054-3073 | None:intergenic | 50.0% |
CCTAGGAATGATGTCATCGG+AGG | + | tig0022059:3077-3096 | None:intergenic | 50.0% | |
CCTCCGATGACATCATTCCT+AGG | - | tig0022059:3074-3093 | Msa1396610:CDS | 50.0% | |
CCATTGTTGATGCGGTTACG+AGG | + | tig0022059:3109-3128 | None:intergenic | 50.0% | |
CCTCGTAACCGCATCAACAA+TGG | - | tig0022059:3106-3125 | Msa1396610:CDS | 50.0% | |
CTCATGCAATCAGGACCGAT+GGG | + | tig0022059:3151-3170 | None:intergenic | 50.0% | |
ACTCATGCAATCAGGACCGA+TGG | + | tig0022059:3152-3171 | None:intergenic | 50.0% | |
!! | CAATCATGGGAAGGTGTTCG+AGG | - | tig0022059:3178-3197 | Msa1396610:CDS | 50.0% |
!! | ATGGGAAGGTGTTCGAGGTT+GGG | - | tig0022059:3183-3202 | Msa1396610:CDS | 50.0% |
GAGGTTGGGTTATGCCTGAA+AGG | - | tig0022059:3197-3216 | Msa1396610:CDS | 50.0% | |
!! | ACCTTCAAGAGAAGGGCGTT+GGG | + | tig0022059:3331-3350 | None:intergenic | 50.0% |
! | TACCTTCAAGAGAAGGGCGT+TGG | + | tig0022059:3332-3351 | None:intergenic | 50.0% |
GCCTGAAAAGCCGGTCAATT+TGG | + | tig0022059:3531-3550 | None:intergenic | 50.0% | |
!! | TTGACCGGCTTTTCAGGCTT+TGG | - | tig0022059:3533-3552 | Msa1396610:CDS | 50.0% |
AACCTAGACCAGAGCAACGT+GGG | + | tig0022059:3722-3741 | None:intergenic | 50.0% | |
! | TCCGCTTGTCAAGTGTCGTT+TGG | - | tig0022059:4459-4478 | Msa1396610:intron | 50.0% |
CCTTCTCTGCTAGTCAACTG+CGG | - | tig0022059:5034-5053 | Msa1396610:intron | 50.0% | |
GTCAGTTGTTCAGTTCGTCC+AGG | - | tig0022059:5172-5191 | Msa1396610:CDS | 50.0% | |
TGAAATGGCCCCTCAAGATG+TGG | - | tig0022059:5203-5222 | Msa1396610:CDS | 50.0% | |
GAGGATCAACTGCAGTTGCT+AGG | - | tig0022059:5582-5601 | Msa1396610:CDS | 50.0% | |
GACTGATAAGGAAGCAGCCT+TGG | - | tig0022059:5614-5633 | Msa1396610:CDS | 50.0% | |
! | GGAAGCAGCCTTGGATGTTT+TGG | - | tig0022059:5623-5642 | Msa1396610:CDS | 50.0% |
GATAGGTAAGGCTCACCGTT+TGG | + | tig0022059:5711-5730 | None:intergenic | 50.0% | |
GGCCCTTGGGCACAAATATT+CGG | + | tig0022059:5788-5807 | None:intergenic | 50.0% | |
CCAAGCAGCCAATCAGAACT+CGG | + | tig0022059:5809-5828 | None:intergenic | 50.0% | |
ATTGGCTGCTTGGATGAGAC+TGG | - | tig0022059:5816-5835 | Msa1396610:CDS | 50.0% | |
!! | TGCTCTGGAGGTGATCTTGA+CGG | - | tig0022059:7081-7100 | Msa1396610:intron | 50.0% |
GGACCATAAGGTGACACTAG+AGG | - | tig0022059:7194-7213 | Msa1396610:intron | 50.0% | |
!! | GACACGTGTTGGTGCTACAT+AGG | + | tig0022059:7257-7276 | None:intergenic | 50.0% |
TGAGTGACATCGACACGTGT+TGG | + | tig0022059:7268-7287 | None:intergenic | 50.0% | |
TGCTATCTCCACCGCACATT+TGG | - | tig0022059:7476-7495 | Msa1396610:intron | 50.0% | |
AGCATGAACCAAATGTGCGG+TGG | + | tig0022059:7487-7506 | None:intergenic | 50.0% | |
TGCTGACCGTGAACACGATA+AGG | - | tig0022059:7503-7522 | Msa1396610:intron | 50.0% | |
CTTCTATGGTGCAACGACTG+AGG | - | tig0022059:7872-7891 | Msa1396610:CDS | 50.0% | |
!! | ACCGTGCGTCTTATTTGCAG+AGG | - | tig0022059:7922-7941 | Msa1396610:CDS | 50.0% |
CCCTCTGCAAATAAGACGCA+CGG | + | tig0022059:7926-7945 | None:intergenic | 50.0% | |
!! | CCGTGCGTCTTATTTGCAGA+GGG | - | tig0022059:7923-7942 | Msa1396610:CDS | 50.0% |
GTTCATCTACGGGTAGCACT+TGG | - | tig0022059:8294-8313 | Msa1396610:CDS | 50.0% | |
!! | AGGGTCTTGTTAACGAGTGC+CGG | - | tig0022059:8403-8422 | Msa1396610:five_prime_UTR | 50.0% |
CACTCTCACTGCCCTAACCA+TGG | - | tig0022059:2787-2806 | Msa1396610:three_prime_UTR | 55.0% | |
ACGGTGGGTGTTTCGGATGA+AGG | + | tig0022059:2818-2837 | None:intergenic | 55.0% | |
!! | ATGTTGGTGACGCGAACGGT+GGG | + | tig0022059:2833-2852 | None:intergenic | 55.0% |
!! | TATGTTGGTGACGCGAACGG+TGG | + | tig0022059:2834-2853 | None:intergenic | 55.0% |
!! | GGGTATGTTGGTGACGCGAA+CGG | + | tig0022059:2837-2856 | None:intergenic | 55.0% |
GTATCGGAGAAGGTCGTTGG+CGG | + | tig0022059:2870-2889 | None:intergenic | 55.0% | |
!! | GAGGTATCGGAGAAGGTCGT+TGG | + | tig0022059:2873-2892 | None:intergenic | 55.0% |
CGATACCTCGAAACCACCGT+TGG | - | tig0022059:2884-2903 | Msa1396610:three_prime_UTR | 55.0% | |
GATTTCGAGAGCGAAGACGG+AGG | + | tig0022059:2915-2934 | None:intergenic | 55.0% | |
CCGTGTTCAGTTCGAGACGT+TGG | - | tig0022059:2973-2992 | Msa1396610:three_prime_UTR | 55.0% | |
TTACGAGGAAGAGCAGGCCT+AGG | + | tig0022059:3094-3113 | None:intergenic | 55.0% | |
ATGCGGTTACGAGGAAGAGC+AGG | + | tig0022059:3100-3119 | None:intergenic | 55.0% | |
!! | CATGGGAAGGTGTTCGAGGT+TGG | - | tig0022059:3182-3201 | Msa1396610:CDS | 55.0% |
ACCCAACGCCCTTCTCTTGA+AGG | - | tig0022059:3327-3346 | Msa1396610:CDS | 55.0% | |
AGGACTCACGTCGTTGAGGA+TGG | - | tig0022059:3675-3694 | Msa1396610:CDS | 55.0% | |
GGACTCACGTCGTTGAGGAT+GGG | - | tig0022059:3676-3695 | Msa1396610:CDS | 55.0% | |
ATTGGAGTCCCACGTTGCTC+TGG | - | tig0022059:3711-3730 | Msa1396610:CDS | 55.0% | |
CAACCTAGACCAGAGCAACG+TGG | + | tig0022059:3723-3742 | None:intergenic | 55.0% | |
CTCAGCTGAGATATGGGCCA+AGG | - | tig0022059:4167-4186 | Msa1396610:intron | 55.0% | |
AGGTTTCAAGCTCGGGACCA+AGG | + | tig0022059:4798-4817 | None:intergenic | 55.0% | |
CCGCAGTTGACTAGCAGAGA+AGG | + | tig0022059:5037-5056 | None:intergenic | 55.0% | |
! | GGCGCTTTTGGCATTGCAAG+AGG | - | tig0022059:5563-5582 | Msa1396610:CDS | 55.0% |
CCAATCAGAACTCGGCCCTT+GGG | + | tig0022059:5801-5820 | None:intergenic | 55.0% | |
! | CCGAGTTCTGATTGGCTGCT+TGG | - | tig0022059:5806-5825 | Msa1396610:CDS | 55.0% |
! | CCAGAGCACTCGTTTGGATG+AGG | + | tig0022059:7069-7088 | None:intergenic | 55.0% |
CCTCATCCAAACGAGTGCTC+TGG | - | tig0022059:7066-7085 | Msa1396610:intron | 55.0% | |
CATCCAAACGAGTGCTCTGG+AGG | - | tig0022059:7069-7088 | Msa1396610:intron | 55.0% | |
! | TCACCTCCAGAGCACTCGTT+TGG | + | tig0022059:7075-7094 | None:intergenic | 55.0% |
!! | GCTCTGGAGGTGATCTTGAC+GGG | - | tig0022059:7082-7101 | Msa1396610:intron | 55.0% |
! | CTCTGGAGGTGATCTTGACG+GGG | - | tig0022059:7083-7102 | Msa1396610:intron | 55.0% |
GTTGGCTGAGCTGCATTCCA+TGG | - | tig0022059:7548-7567 | Msa1396610:intron | 55.0% | |
GACGCGAACGGTGGGTGTTT+CGG | + | tig0022059:2825-2844 | None:intergenic | 60.0% | |
! | GGTGGCGGTATGGGGTATGT+TGG | + | tig0022059:2849-2868 | None:intergenic | 60.0% |
GTCCCACGTTGCTCTGGTCT+AGG | - | tig0022059:3717-3736 | Msa1396610:CDS | 60.0% | |
! | CCCAAGGGCCGAGTTCTGAT+TGG | - | tig0022059:5798-5817 | Msa1396610:CDS | 60.0% |
GCCAATCAGAACTCGGCCCT+TGG | + | tig0022059:5802-5821 | None:intergenic | 60.0% | |
! | TCGTTGGCGGTGGCGGTATG+GGG | + | tig0022059:2857-2876 | None:intergenic | 65.0% |
! | GTCGTTGGCGGTGGCGGTAT+GGG | + | tig0022059:2858-2877 | None:intergenic | 65.0% |
GAGAAGGTCGTTGGCGGTGG+CGG | + | tig0022059:2864-2883 | None:intergenic | 65.0% | |
TCGGAGAAGGTCGTTGGCGG+TGG | + | tig0022059:2867-2886 | None:intergenic | 65.0% | |
AGCGGCCAACGGTGGTTTCG+AGG | + | tig0022059:2892-2911 | None:intergenic | 65.0% | |
GAAGACGGAGGAGCGGCCAA+CGG | + | tig0022059:2903-2922 | None:intergenic | 65.0% | |
CGAGAGCGAAGACGGAGGAG+CGG | + | tig0022059:2910-2929 | None:intergenic | 65.0% | |
!! | CGGAGGAAGCGTCGAGACAG+AGG | + | tig0022059:3060-3079 | None:intergenic | 65.0% |
! | GGTCGTTGGCGGTGGCGGTA+TGG | + | tig0022059:2859-2878 | None:intergenic | 70.0% |
GACGGAGGAGCGGCCAACGG+TGG | + | tig0022059:2900-2919 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0022059 | gene | 2743 | 8451 | 2743 | ID=Msa1396610;Name=Msa1396610 |
tig0022059 | mRNA | 2743 | 8451 | 2743 | ID=Msa1396610-mRNA-1;Parent=Msa1396610;Name=Msa1396610-mRNA-1;_AED=0.05;_eAED=0.05;_QI=63|1|1|1|1|1|4|258|1123 |
tig0022059 | exon | 2743 | 3765 | 2743 | ID=Msa1396610-mRNA-1:exon:15630;Parent=Msa1396610-mRNA-1 |
tig0022059 | exon | 3979 | 4129 | 3979 | ID=Msa1396610-mRNA-1:exon:15629;Parent=Msa1396610-mRNA-1 |
tig0022059 | exon | 5110 | 7022 | 5110 | ID=Msa1396610-mRNA-1:exon:15628;Parent=Msa1396610-mRNA-1 |
tig0022059 | exon | 7846 | 8451 | 7846 | ID=Msa1396610-mRNA-1:exon:15627;Parent=Msa1396610-mRNA-1 |
tig0022059 | five_prime_UTR | 8389 | 8451 | 8389 | ID=Msa1396610-mRNA-1:five_prime_utr;Parent=Msa1396610-mRNA-1 |
tig0022059 | CDS | 7846 | 8388 | 7846 | ID=Msa1396610-mRNA-1:cds;Parent=Msa1396610-mRNA-1 |
tig0022059 | CDS | 5110 | 7022 | 5110 | ID=Msa1396610-mRNA-1:cds;Parent=Msa1396610-mRNA-1 |
tig0022059 | CDS | 3979 | 4129 | 3979 | ID=Msa1396610-mRNA-1:cds;Parent=Msa1396610-mRNA-1 |
tig0022059 | CDS | 3001 | 3765 | 3001 | ID=Msa1396610-mRNA-1:cds;Parent=Msa1396610-mRNA-1 |
tig0022059 | three_prime_UTR | 2743 | 3000 | 2743 | ID=Msa1396610-mRNA-1:three_prime_utr;Parent=Msa1396610-mRNA-1 |
Gene Sequence |
Protein sequence |