Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1330870 | XP_013457822.1 | 93.856 | 1123 | 17 | 1 | 1 | 1071 | 1 | 1123 | 0.0 | 2167 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1330870 | sp|O82504|RDR2_ARATH | 57.462 | 1119 | 414 | 10 | 5 | 1067 | 6 | 1118 | 0.0 | 1291 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1330870 | A0A072US42 | 93.856 | 1123 | 17 | 1 | 1 | 1071 | 1 | 1123 | 0.0 | 2167 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1259180 | Msa1330870 | 0.960544 | 1.120316e-118 | -8.615850e-47 |
Msa1298570 | Msa1330870 | 0.945727 | 1.773433e-104 | -8.615850e-47 |
Msa1330870 | Msa1396610 | 0.960532 | 1.153932e-118 | -8.615850e-47 |
Msa1172020 | Msa1330870 | 0.940904 | 1.048834e-100 | -8.615850e-47 |
Msa1172080 | Msa1330870 | 0.866778 | 2.222291e-65 | -8.615850e-47 |
Msa1172160 | Msa1330870 | 0.955734 | 1.530466e-113 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1330870 | MtrunA17_Chr4g0059271 | 93.856 | 1123 | 17 | 1 | 1 | 1071 | 1 | 1123 | 0.0 | 2167 |
Msa1330870 | MtrunA17_Chr1g0161491 | 35.986 | 1131 | 618 | 19 | 6 | 1067 | 16 | 1109 | 0.0 | 688 |
Msa1330870 | MtrunA17_Chr1g0161471 | 36.388 | 1124 | 624 | 17 | 7 | 1067 | 3 | 1098 | 0.0 | 685 |
Msa1330870 | MtrunA17_Chr1g0161451 | 35.613 | 1126 | 622 | 17 | 10 | 1063 | 4 | 1098 | 0.0 | 681 |
Msa1330870 | MtrunA17_Chr1g0161521 | 36.564 | 1135 | 601 | 24 | 6 | 1063 | 2 | 1094 | 0.0 | 676 |
Msa1330870 | MtrunA17_Chr1g0161511 | 36.074 | 1131 | 621 | 22 | 6 | 1067 | 2 | 1099 | 0.0 | 644 |
Msa1330870 | MtrunA17_Chr3g0137841 | 34.636 | 947 | 498 | 22 | 217 | 1064 | 254 | 1178 | 3.71e-156 | 495 |
Msa1330870 | MtrunA17_Chr4g0059261 | 54.190 | 179 | 47 | 3 | 827 | 1004 | 1 | 145 | 1.64e-49 | 172 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1330870 | AT4G11130.1 | 57.462 | 1119 | 414 | 10 | 5 | 1067 | 6 | 1118 | 0.0 | 1291 |
Msa1330870 | AT1G14790.1 | 37.433 | 1114 | 610 | 19 | 10 | 1066 | 4 | 1087 | 0.0 | 697 |
Msa1330870 | AT3G49500.3 | 33.201 | 1006 | 550 | 22 | 152 | 1063 | 193 | 1170 | 1.23e-149 | 478 |
Msa1330870 | AT3G49500.4 | 33.201 | 1006 | 550 | 22 | 152 | 1063 | 193 | 1170 | 1.23e-149 | 478 |
Msa1330870 | AT3G49500.1 | 33.201 | 1006 | 550 | 22 | 152 | 1063 | 193 | 1170 | 1.23e-149 | 478 |
Msa1330870 | AT3G49500.2 | 33.201 | 1006 | 550 | 22 | 152 | 1063 | 193 | 1170 | 1.23e-149 | 478 |
Msa1330870 | AT3G49500.5 | 33.201 | 1006 | 550 | 22 | 152 | 1063 | 193 | 1170 | 1.23e-149 | 478 |
Msa1330870 | AT2G19930.3 | 25.610 | 574 | 299 | 22 | 452 | 908 | 263 | 825 | 1.36e-22 | 105 |
Msa1330870 | AT2G19930.2 | 25.610 | 574 | 299 | 22 | 452 | 908 | 269 | 831 | 1.43e-22 | 105 |
Msa1330870 | AT2G19930.1 | 25.610 | 574 | 299 | 22 | 452 | 908 | 269 | 831 | 1.47e-22 | 105 |
Msa1330870 | AT2G19910.2 | 22.787 | 610 | 341 | 22 | 426 | 917 | 247 | 844 | 7.35e-22 | 102 |
Msa1330870 | AT2G19920.1 | 23.252 | 572 | 327 | 20 | 447 | 911 | 268 | 834 | 3.70e-21 | 100 |
Msa1330870 | AT2G19920.3 | 23.252 | 572 | 327 | 20 | 447 | 911 | 267 | 833 | 3.73e-21 | 100 |
Msa1330870 | AT2G19920.2 | 23.252 | 572 | 327 | 20 | 447 | 911 | 281 | 847 | 3.81e-21 | 100 |
Msa1330870 | AT2G19910.1 | 22.617 | 619 | 340 | 22 | 426 | 917 | 247 | 853 | 3.95e-21 | 100 |
Msa1330870 | AT2G19920.4 | 23.252 | 572 | 327 | 20 | 447 | 911 | 267 | 833 | 4.31e-21 | 100 |
Find 267 sgRNAs with CRISPR-Local
Find 456 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTAAATGTAAAAGCTATTA+TGG | 0.121735 | 8_4:-50145328 | None:intergenic |
AAAGGCAGAGACTTGATTTC+TGG | 0.185536 | 8_4:+50140354 | Msa1330870:CDS |
AATCTCAATCACTTTGAAAA+AGG | 0.199716 | 8_4:+50142051 | Msa1330870:CDS |
AAATCAAGTCTCTGCCTTTC+AGG | 0.202069 | 8_4:-50140350 | None:intergenic |
ACCCATTCTTGCTGCACATT+TGG | 0.246017 | 8_4:-50142290 | None:intergenic |
GGAAGCAGCCTTGGATGTTT+TGG | 0.247594 | 8_4:+50142762 | Msa1330870:CDS |
TTGCAAGTTTGAATCAATTA+TGG | 0.249399 | 8_4:-50144846 | None:intergenic |
ATGTCTCCATAACTTATATT+TGG | 0.262842 | 8_4:-50145385 | None:intergenic |
CTGGTGATCATATGCTTCTT+TGG | 0.269431 | 8_4:-50144903 | None:intergenic |
TATATATCCAAAGGTGTATT+AGG | 0.273653 | 8_4:+50144809 | Msa1330870:CDS |
TGCCTTGTATTTCCACAAAA+AGG | 0.275740 | 8_4:+50143196 | Msa1330870:CDS |
GTCGTTGGCGGTGGCGGTAT+GGG | 0.277922 | 8_4:-50139994 | None:intergenic |
TCTTGTTCTCGGCGAGAGTT+AGG | 0.279675 | 8_4:-50140151 | None:intergenic |
GAATGCTTTGCGTCACTAAA+TGG | 0.283123 | 8_4:+50142608 | Msa1330870:CDS |
AAATGTAGCTGCCAAGTTTA+AGG | 0.286106 | 8_4:+50141352 | Msa1330870:CDS |
ATCTCTTTGATGAGCTTCTA+TGG | 0.288965 | 8_4:+50144998 | Msa1330870:CDS |
TCAAACCTCTCCATGAAATC+TGG | 0.294279 | 8_4:-50144776 | None:intergenic |
AATTAAAGATGAGGCGCTTT+TGG | 0.304782 | 8_4:+50142690 | Msa1330870:CDS |
GGTCGTTGGCGGTGGCGGTA+TGG | 0.306523 | 8_4:-50139995 | None:intergenic |
TTCCTTCAGCATTTCAAATT+CGG | 0.314317 | 8_4:+50142491 | Msa1330870:CDS |
TTGATTCAAACTTGCAAGTA+AGG | 0.321264 | 8_4:+50144852 | Msa1330870:CDS |
TCTCTTGGTTTCAAAGATCT+TGG | 0.325340 | 8_4:-50144749 | None:intergenic |
TATTCTTCTCAGCTGAGATA+TGG | 0.333555 | 8_4:+50141299 | Msa1330870:intron |
TGCTATCTCCACCGCACATT+TGG | 0.333953 | 8_4:+50144616 | Msa1330870:CDS |
ATTCGGTATGGTGGATATAA+AGG | 0.339975 | 8_4:+50142508 | Msa1330870:CDS |
TCAGAGGTGATTTCAATATC+TGG | 0.341597 | 8_4:-50142373 | None:intergenic |
AAGAGAGTTTCCAGATTTCA+TGG | 0.342194 | 8_4:+50144766 | Msa1330870:CDS |
AAGCGTCGAGACAGAGGAAA+TGG | 0.352979 | 8_4:-50140190 | None:intergenic |
GTCATACTCATACTACAAAA+TGG | 0.353669 | 8_4:-50145409 | None:intergenic |
GCCAAGGATATATCAGAAAA+TGG | 0.356475 | 8_4:+50141322 | Msa1330870:CDS |
AGAGATAATGATTGATTAAG+AGG | 0.361305 | 8_4:-50145500 | None:intergenic |
GGCCCTTGGGCACAAATATT+CGG | 0.361333 | 8_4:-50142924 | None:intergenic |
CTTATTTGCAGAGGGATAAC+AGG | 0.361659 | 8_4:+50145071 | Msa1330870:CDS |
GTAAATGTAAAAGCTATTAT+GGG | 0.362309 | 8_4:-50145327 | None:intergenic |
AGGAAGAAGGCCTCGTATAA+TGG | 0.368988 | 8_4:+50144313 | Msa1330870:CDS |
TTAAACTTGGCAGCTACATT+TGG | 0.370092 | 8_4:-50141350 | None:intergenic |
GATCACCAGCTTGAAGTTGA+TGG | 0.370925 | 8_4:+50144917 | Msa1330870:CDS |
GGATTCCAAGTTACCTTATG+AGG | 0.373899 | 8_4:+50141619 | Msa1330870:CDS |
CTTCGAGATGGGATTCTAGT+TGG | 0.375811 | 8_4:+50142127 | Msa1330870:CDS |
GTGATTGAGATTGCATTGTT+TGG | 0.377189 | 8_4:-50142040 | None:intergenic |
TCCGCTTGTCAAGTGTCGTT+TGG | 0.377684 | 8_4:+50141598 | Msa1330870:CDS |
TAATTCCTAAGGTGGACAAC+AGG | 0.378356 | 8_4:-50142672 | None:intergenic |
AAGGAGAAGTTTCTTGTTCT+CGG | 0.378407 | 8_4:-50140162 | None:intergenic |
TACTGTTTCTCAGATGGTAT+TGG | 0.379094 | 8_4:+50142406 | Msa1330870:CDS |
TGTTTCTTTCAACTTTGGTT+TGG | 0.385184 | 8_4:-50139884 | None:intergenic |
CGATGGGAAAACCAGCATAA+AGG | 0.385658 | 8_4:-50140271 | None:intergenic |
TGATGAGTTGATTGACTTGT+TGG | 0.387549 | 8_4:+50141700 | Msa1330870:CDS |
GCCGCATGAATATCAACTTA+TGG | 0.388044 | 8_4:+50145180 | Msa1330870:CDS |
TAGTTTCCAAATATAAGTTA+TGG | 0.390100 | 8_4:+50145379 | Msa1330870:three_prime_UTR |
CCGAGTTCTGATTGGCTGCT+TGG | 0.391015 | 8_4:+50142945 | Msa1330870:CDS |
TTACCTCTAGTGTCACCTTA+TGG | 0.398055 | 8_4:-50144337 | None:intergenic |
GACGCGAACGGTGGGTGTTT+CGG | 0.398686 | 8_4:-50139961 | None:intergenic |
TTCTCAACTTTAAAGTCCAT+TGG | 0.399433 | 8_4:+50141434 | Msa1330870:CDS |
ATGAAGGAATCACCATGGTT+AGG | 0.399658 | 8_4:-50139938 | None:intergenic |
TTCCAAATGTGCAGCAAGAA+TGG | 0.406312 | 8_4:+50142288 | Msa1330870:CDS |
GGCCATTTCAAAAGTTTGCC+TGG | 0.408999 | 8_4:-50142329 | None:intergenic |
ACCCAACGCCCTTCTCTTGA+AGG | 0.410402 | 8_4:+50140466 | Msa1330870:CDS |
ATACTTATCTCTGTGACTTA+TGG | 0.410941 | 8_4:-50144963 | None:intergenic |
TATGAACAAGAGAATTCAAT+TGG | 0.412886 | 8_4:-50141649 | None:intergenic |
ATGATAATTTCTTAAAAGAA+TGG | 0.414373 | 8_4:-50142549 | None:intergenic |
ATTCTTCTCAGCTGAGATAT+GGG | 0.418568 | 8_4:+50141300 | Msa1330870:intron |
CAGTGAAGAATTAGAAGAAA+AGG | 0.419054 | 8_4:+50143162 | Msa1330870:CDS |
ATTAGAAGAAAAGGGCTTGA+GGG | 0.420122 | 8_4:+50143171 | Msa1330870:CDS |
GGCCAAGAGTAGAAAATGTC+TGG | 0.424194 | 8_4:+50144664 | Msa1330870:CDS |
CTTCTTCCTGTGTAGTCCAT+TGG | 0.424934 | 8_4:-50144299 | None:intergenic |
ATGAAATCTGGAAACTCTCT+TGG | 0.426283 | 8_4:-50144764 | None:intergenic |
CGCCTCATCTTTAATTCCTA+AGG | 0.427060 | 8_4:-50142683 | None:intergenic |
CCAATCAGAACTCGGCCCTT+GGG | 0.428098 | 8_4:-50142937 | None:intergenic |
TGAAGGAATCACCATGGTTA+GGG | 0.430736 | 8_4:-50139937 | None:intergenic |
AACAATGGTGCCCTTTATGC+TGG | 0.433646 | 8_4:+50140260 | Msa1330870:CDS |
ATGGGAAGGTGTTCGAGGTT+GGG | 0.433950 | 8_4:+50140322 | Msa1330870:CDS |
ATGCTTTACCACATGATTTG+AGG | 0.435061 | 8_4:-50141954 | None:intergenic |
AACTGCGGTCAAATTCTGTT+TGG | 0.437464 | 8_4:+50142188 | Msa1330870:CDS |
TCACCTCCAGAGCACTCGTT+TGG | 0.439573 | 8_4:-50144212 | None:intergenic |
GATGGGAAAACCAGCATAAA+GGG | 0.442690 | 8_4:-50140270 | None:intergenic |
TGCTCTGGAGGTGATCTTGA+CGG | 0.447828 | 8_4:+50144221 | Msa1330870:CDS |
AAAGATCTTGGCATTTCTGC+AGG | 0.448689 | 8_4:-50144737 | None:intergenic |
TTACATGATCAATGATACTT+TGG | 0.449411 | 8_4:+50144592 | Msa1330870:CDS |
GATAGGTAAGGCTCACCGTT+TGG | 0.450059 | 8_4:-50142847 | None:intergenic |
TGATTTGAGGTTTCAAGCTC+GGG | 0.451659 | 8_4:-50141941 | None:intergenic |
ACTGAGGATGAAATGCTAAC+TGG | 0.452037 | 8_4:+50145028 | Msa1330870:CDS |
TCTCAACTTTAAAGTCCATT+GGG | 0.455669 | 8_4:+50141435 | Msa1330870:CDS |
TCGGAGAAGGTCGTTGGCGG+TGG | 0.457047 | 8_4:-50140003 | None:intergenic |
AAGGCAGAGACTTGATTTCT+GGG | 0.457890 | 8_4:+50140355 | Msa1330870:CDS |
ATATCCCTGTTGTCCACCTT+AGG | 0.460453 | 8_4:+50142667 | Msa1330870:CDS |
AAGTGTGTTTCTTTCAACTT+TGG | 0.460703 | 8_4:-50139889 | None:intergenic |
AGGAAAGATGTTGACTGATA+AGG | 0.461221 | 8_4:+50142741 | Msa1330870:CDS |
TTACATTTGTCGAAGAGGAT+TGG | 0.461457 | 8_4:+50142008 | Msa1330870:CDS |
GCTCTGGAGGTGATCTTGAC+GGG | 0.461676 | 8_4:+50144222 | Msa1330870:CDS |
GAGCCTTGAGCATCATTGAT+AGG | 0.462886 | 8_4:-50142864 | None:intergenic |
AGCTTTCGTTGTAATATTTG+TGG | 0.463226 | 8_4:-50145231 | None:intergenic |
GAGAAGGTCGTTGGCGGTGG+CGG | 0.463497 | 8_4:-50140000 | None:intergenic |
TTATATATTTCAGTTCTAAG+AGG | 0.464161 | 8_4:-50142088 | None:intergenic |
TCTTCAGCGACTACACCAAC+TGG | 0.465472 | 8_4:+50140072 | Msa1330870:CDS |
CATGGGAAGGTGTTCGAGGT+TGG | 0.467410 | 8_4:+50140321 | Msa1330870:CDS |
TGCTGACCGTGAACACGATA+AGG | 0.469968 | 8_4:+50144643 | Msa1330870:CDS |
ACCTTCAAGAGAAGGGCGTT+GGG | 0.470440 | 8_4:-50140467 | None:intergenic |
GCCTCGTATAATGGACCATA+AGG | 0.471634 | 8_4:+50144322 | Msa1330870:CDS |
CTGCCAAGTTTAAGGATGAT+AGG | 0.472401 | 8_4:+50141360 | Msa1330870:CDS |
TCTTGGCCTTATCGTGTTCA+CGG | 0.472605 | 8_4:-50144649 | None:intergenic |
AAGACCCTCATAAGGTAACT+TGG | 0.473229 | 8_4:-50141624 | None:intergenic |
AGTGAAGAATTAGAAGAAAA+GGG | 0.474853 | 8_4:+50143163 | Msa1330870:CDS |
ACTTGATTTCTGGGTCACTC+AGG | 0.476813 | 8_4:+50140364 | Msa1330870:CDS |
CTTGTTCTCGGCGAGAGTTA+GGG | 0.479196 | 8_4:-50140150 | None:intergenic |
TGAAGCACACTCATGCAATC+AGG | 0.481424 | 8_4:-50140296 | None:intergenic |
TCGTTGGCGGTGGCGGTATG+GGG | 0.481457 | 8_4:-50139993 | None:intergenic |
GAATTTGAAGGATCTAAGTC+TGG | 0.481716 | 8_4:+50141538 | Msa1330870:CDS |
TACCTTCAAGAGAAGGGCGT+TGG | 0.481883 | 8_4:-50140468 | None:intergenic |
CTCAGTAAAGGATCTTCAGC+TGG | 0.482094 | 8_4:+50145126 | Msa1330870:CDS |
TATTGAATATTCTTCGAGAT+GGG | 0.484103 | 8_4:+50142116 | Msa1330870:CDS |
ATGATTTGAGGTTTCAAGCT+CGG | 0.484910 | 8_4:-50141942 | None:intergenic |
GACTGATAAGGAAGCAGCCT+TGG | 0.485593 | 8_4:+50142753 | Msa1330870:CDS |
TCCAAATGTGCAGCAAGAAT+GGG | 0.486535 | 8_4:+50142289 | Msa1330870:CDS |
GTTCATCTACGGGTAGCACT+TGG | 0.486565 | 8_4:+50145434 | Msa1330870:three_prime_UTR |
AATCTTTGACGGGGTAATCA+AGG | 0.487076 | 8_4:-50141906 | None:intergenic |
TTAAGCTTTCCATGGATTGT+CGG | 0.487901 | 8_4:+50145262 | Msa1330870:CDS |
AGCGGCCAACGGTGGTTTCG+AGG | 0.488002 | 8_4:-50140028 | None:intergenic |
GATTGACTTGTTGGTAAGCT+TGG | 0.489425 | 8_4:+50141709 | Msa1330870:CDS |
TACATGATCAATGATACTTT+GGG | 0.492368 | 8_4:+50144593 | Msa1330870:CDS |
AGCAGATATCAGAGAATGGA+TGG | 0.494048 | 8_4:+50142240 | Msa1330870:CDS |
CCTCATCCAAACGAGTGCTC+TGG | 0.495371 | 8_4:+50144206 | Msa1330870:CDS |
ACGGTGGGTGTTTCGGATGA+AGG | 0.497872 | 8_4:-50139954 | None:intergenic |
GAGTATGACATGTTCATCTA+CGG | 0.498802 | 8_4:+50145423 | Msa1330870:three_prime_UTR |
GGTGGCGGTATGGGGTATGT+TGG | 0.499318 | 8_4:-50139985 | None:intergenic |
GAGGTATCGGAGAAGGTCGT+TGG | 0.500329 | 8_4:-50140009 | None:intergenic |
GAATTAAATCCACATCTTGA+GGG | 0.500437 | 8_4:-50142351 | None:intergenic |
TTAAAATGTTTAAAGAGTGC+CGG | 0.502743 | 8_4:-50145562 | None:intergenic |
ATTGGCTGCTTGGATGAGAC+TGG | 0.502836 | 8_4:+50142955 | Msa1330870:CDS |
ACAAGCGGAACTGTTTCAGT+TGG | 0.503145 | 8_4:-50141584 | None:intergenic |
TGTAAAAGCTATTATGGGAC+AGG | 0.505147 | 8_4:-50145322 | None:intergenic |
TCGAATTCTAATCTCAGTAA+AGG | 0.506278 | 8_4:+50145114 | Msa1330870:CDS |
GCATGAGTGTGCTTCAATCA+TGG | 0.506625 | 8_4:+50140303 | Msa1330870:CDS |
GACAGAGGAAATGGGAGCTA+AGG | 0.506663 | 8_4:-50140181 | None:intergenic |
GTTGTAATATTTGTGGTGAT+AGG | 0.508964 | 8_4:-50145224 | None:intergenic |
GAAGATTTCGAGAGCGAAGA+CGG | 0.509538 | 8_4:-50140054 | None:intergenic |
ACACCTTTGGATATATACAT+AGG | 0.510540 | 8_4:-50144803 | None:intergenic |
AGGATATATCAGAAAATGGC+GGG | 0.511059 | 8_4:+50141326 | Msa1330870:CDS |
GAGATAATGATTGATTAAGA+GGG | 0.511789 | 8_4:-50145499 | None:intergenic |
CCGTCAAAGATTTATTGCCT+TGG | 0.512172 | 8_4:+50141917 | Msa1330870:CDS |
TTCAGCTGGAAGCTAAAGAA+TGG | 0.512543 | 8_4:+50145140 | Msa1330870:CDS |
TTCAAATTCTCTCTGTAGAG+CGG | 0.513592 | 8_4:-50141524 | None:intergenic |
AGGGTCTTGTTAACGAGTGC+CGG | 0.514581 | 8_4:+50145543 | Msa1330870:three_prime_UTR |
CAAGGCAATAAATCTTTGAC+GGG | 0.515130 | 8_4:-50141916 | None:intergenic |
GTTGGCTGAGCTGCATTCCA+TGG | 0.515719 | 8_4:+50144688 | Msa1330870:CDS |
GGAATTAAATCCACATCTTG+AGG | 0.517345 | 8_4:-50142352 | None:intergenic |
AAGCTTGGATGCAGAAACTA+AGG | 0.517404 | 8_4:+50141724 | Msa1330870:CDS |
GATGGGTATTGTTCTGATGA+AGG | 0.517540 | 8_4:+50140437 | Msa1330870:CDS |
CAGGAGATACGGAGATATGA+AGG | 0.520429 | 8_4:+50145090 | Msa1330870:CDS |
GCATTTCAAATTCGGTATGG+TGG | 0.520713 | 8_4:+50142499 | Msa1330870:CDS |
AAAATGTCACCGACAATCCA+TGG | 0.520826 | 8_4:-50145271 | None:intergenic |
CCAAGGCAATAAATCTTTGA+CGG | 0.522349 | 8_4:-50141917 | None:intergenic |
AGCGTCGAGACAGAGGAAAT+GGG | 0.523626 | 8_4:-50140189 | None:intergenic |
CAACGGTGGTTTCGAGGTAT+CGG | 0.524158 | 8_4:-50140022 | None:intergenic |
CCAGAGCACTCGTTTGGATG+AGG | 0.526144 | 8_4:-50144206 | None:intergenic |
AATTGGAAAAGACCCTCATA+AGG | 0.526321 | 8_4:-50141632 | None:intergenic |
TATGTTGGTGACGCGAACGG+TGG | 0.526738 | 8_4:-50139970 | None:intergenic |
TCAAATTCTCTCTGTAGAGC+GGG | 0.527074 | 8_4:-50141523 | None:intergenic |
CCTCCGATGACATCATTCCT+AGG | 0.527766 | 8_4:+50140213 | Msa1330870:CDS |
TAGAACTGAAATATATAAGC+GGG | 0.527945 | 8_4:+50142093 | Msa1330870:CDS |
CAGAGGGATAACAGGAGATA+CGG | 0.530199 | 8_4:+50145079 | Msa1330870:CDS |
GATATTGAAATCACCTCTGA+TGG | 0.531578 | 8_4:+50142376 | Msa1330870:CDS |
TAAACTTTCCAAAACATCCA+AGG | 0.533340 | 8_4:-50142770 | None:intergenic |
GTATTGAATATTCTTCGAGA+TGG | 0.533472 | 8_4:+50142115 | Msa1330870:CDS |
GTCAGTTGTTCAGTTCGTCC+AGG | 0.534486 | 8_4:+50142311 | Msa1330870:CDS |
CAATCATGGGAAGGTGTTCG+AGG | 0.534880 | 8_4:+50140317 | Msa1330870:CDS |
AATAATGTACCTTCAAGAGA+AGG | 0.536479 | 8_4:-50140475 | None:intergenic |
AAGGATCTAAGTCTGGAAGA+TGG | 0.537009 | 8_4:+50141545 | Msa1330870:CDS |
TCAGCATTTCAAATTCGGTA+TGG | 0.541932 | 8_4:+50142496 | Msa1330870:CDS |
TTACGAGGAAGAGCAGGCCT+AGG | 0.542828 | 8_4:-50140230 | None:intergenic |
GATTCCAAGTTACCTTATGA+GGG | 0.542917 | 8_4:+50141620 | Msa1330870:CDS |
GAGGATCAACTGCAGTTGCT+AGG | 0.543687 | 8_4:+50142721 | Msa1330870:CDS |
AATTAGAAGAAAAGGGCTTG+AGG | 0.544606 | 8_4:+50143170 | Msa1330870:CDS |
ATGCGGTTACGAGGAAGAGC+AGG | 0.546517 | 8_4:-50140236 | None:intergenic |
ATGCCGAATATTTGTGCCCA+AGG | 0.547697 | 8_4:+50142921 | Msa1330870:CDS |
ATACCTATCATCCTTAAACT+TGG | 0.548449 | 8_4:-50141363 | None:intergenic |
CGGAGGAAGCGTCGAGACAG+AGG | 0.549019 | 8_4:-50140196 | None:intergenic |
TTCATCTACGGGTAGCACTT+GGG | 0.550826 | 8_4:+50145435 | Msa1330870:three_prime_UTR |
GCTCTACAGAGAGAATTTGA+AGG | 0.554058 | 8_4:+50141526 | Msa1330870:CDS |
AGCTCAAACTGAAAATCCAA+TGG | 0.558132 | 8_4:+50144283 | Msa1330870:CDS |
CTTGATTTCTGGGTCACTCA+GGG | 0.560046 | 8_4:+50140365 | Msa1330870:CDS |
CTTTGCAAAATCAACTGCCA+TGG | 0.561690 | 8_4:-50144705 | None:intergenic |
ATCTCTCGATTGAGAAAGCA+CGG | 0.562182 | 8_4:-50142643 | None:intergenic |
CCCTCTGCAAATAAGACGCA+CGG | 0.562446 | 8_4:-50145063 | None:intergenic |
AGTATGACATGTTCATCTAC+GGG | 0.563607 | 8_4:+50145424 | Msa1330870:three_prime_UTR |
TTGAGCATCATTGATAGGTA+AGG | 0.565773 | 8_4:-50142859 | None:intergenic |
GAGGTTGGGTTATGCCTGAA+AGG | 0.566352 | 8_4:+50140336 | Msa1330870:CDS |
CCAAGCAGCCAATCAGAACT+CGG | 0.567198 | 8_4:-50142945 | None:intergenic |
GACGGAGGAGCGGCCAACGG+TGG | 0.569208 | 8_4:-50140036 | None:intergenic |
GAAGACGGAGGAGCGGCCAA+CGG | 0.569296 | 8_4:-50140039 | None:intergenic |
CATCCAAACGAGTGCTCTGG+AGG | 0.571761 | 8_4:+50144209 | Msa1330870:CDS |
CTCAGCTGAGATATGGGCCA+AGG | 0.573402 | 8_4:+50141306 | Msa1330870:intron |
ACTCATGCAATCAGGACCGA+TGG | 0.575204 | 8_4:-50140288 | None:intergenic |
TGAAATGGCCCCTCAAGATG+TGG | 0.577783 | 8_4:+50142342 | Msa1330870:CDS |
GGGTATGTTGGTGACGCGAA+CGG | 0.578509 | 8_4:-50139973 | None:intergenic |
TTCTAGTCAAGATGCTGCAT+AGG | 0.579278 | 8_4:+50142815 | Msa1330870:CDS |
CAATGGACTACACAGGAAGA+AGG | 0.581873 | 8_4:+50144300 | Msa1330870:CDS |
CATGAGTGTGCTTCAATCAT+GGG | 0.584065 | 8_4:+50140304 | Msa1330870:CDS |
AGGTTTCAAGCTCGGGACCA+AGG | 0.584833 | 8_4:-50141934 | None:intergenic |
CAAAACCATCAACTTCAAGC+TGG | 0.585160 | 8_4:-50144922 | None:intergenic |
GAGTAGAAAATGTCTGGAGT+TGG | 0.587027 | 8_4:+50144670 | Msa1330870:CDS |
CCGCAGTTGACTAGCAGAGA+AGG | 0.587586 | 8_4:-50142173 | None:intergenic |
AACTGGAAATCTCGCGGAGT+AGG | 0.587687 | 8_4:+50140089 | Msa1330870:CDS |
CCTCGTAACCGCATCAACAA+TGG | 0.589683 | 8_4:+50140245 | Msa1330870:CDS |
AAACCTATGTATATATCCAA+AGG | 0.590044 | 8_4:+50144800 | Msa1330870:CDS |
CTCTGGAGGTGATCTTGACG+GGG | 0.590343 | 8_4:+50144223 | Msa1330870:CDS |
AAGCAGCAGATATCAGAGAA+TGG | 0.591150 | 8_4:+50142236 | Msa1330870:CDS |
GTATCGGAGAAGGTCGTTGG+CGG | 0.591381 | 8_4:-50140006 | None:intergenic |
CGAGAGCGAAGACGGAGGAG+CGG | 0.591558 | 8_4:-50140046 | None:intergenic |
ATGTTGGTGACGCGAACGGT+GGG | 0.593609 | 8_4:-50139969 | None:intergenic |
ATAGACTACTGTTTCTCAGA+TGG | 0.597479 | 8_4:+50142400 | Msa1330870:CDS |
CTTCACTGTAGACAGCATCA+AGG | 0.597815 | 8_4:-50143147 | None:intergenic |
CTTGCAAGTAAGGTTTGACA+TGG | 0.598486 | 8_4:+50144862 | Msa1330870:CDS |
AGTTTCCAGATTTCATGGAG+AGG | 0.599984 | 8_4:+50144771 | Msa1330870:CDS |
TTACCTATCAATGATGCTCA+AGG | 0.600272 | 8_4:+50142861 | Msa1330870:CDS |
TGGTTTCGAGGTATCGGAGA+AGG | 0.600522 | 8_4:-50140016 | None:intergenic |
CTCATCTTTAATTCCTAAGG+TGG | 0.601222 | 8_4:-50142680 | None:intergenic |
ATAATGTACCTTCAAGAGAA+GGG | 0.602102 | 8_4:-50140474 | None:intergenic |
TACCGAATTTGAAATGCTGA+AGG | 0.602636 | 8_4:-50142493 | None:intergenic |
GAGGATTACATTTGTCGAAG+AGG | 0.605467 | 8_4:+50142003 | Msa1330870:CDS |
TCCAAACGACACTTGACAAG+CGG | 0.605528 | 8_4:-50141599 | None:intergenic |
AAAGGGCACCATTGTTGATG+CGG | 0.606832 | 8_4:-50140253 | None:intergenic |
ACCGTGCGTCTTATTTGCAG+AGG | 0.612147 | 8_4:+50145062 | Msa1330870:CDS |
CTTATCTCTGTGACTTATGG+CGG | 0.614852 | 8_4:-50144960 | None:intergenic |
AATTCCTAAGGTGGACAACA+GGG | 0.615361 | 8_4:-50142671 | None:intergenic |
CCGTGTTCAGTTCGAGACGT+TGG | 0.616185 | 8_4:+50140112 | Msa1330870:CDS |
AAATGAGGTTGAGTGCCCAA+TGG | 0.616736 | 8_4:-50141450 | None:intergenic |
AAAGCTATTATGGGACAGGA+GGG | 0.619131 | 8_4:-50145318 | None:intergenic |
ACAGTAGTCTATACCATCAG+AGG | 0.619390 | 8_4:-50142389 | None:intergenic |
CACTCTCACTGCCCTAACCA+TGG | 0.619917 | 8_4:+50139926 | Msa1330870:exon |
CATATGCTTCAGACTTCATG+AGG | 0.619958 | 8_4:+50141984 | Msa1330870:CDS |
AAAAGCTATTATGGGACAGG+AGG | 0.621171 | 8_4:-50145319 | None:intergenic |
ATCAACTTATGGCATCTGCA+TGG | 0.623828 | 8_4:+50145191 | Msa1330870:CDS |
CCATTGTTGATGCGGTTACG+AGG | 0.625862 | 8_4:-50140245 | None:intergenic |
TGCCGAATATTTGTGCCCAA+GGG | 0.626409 | 8_4:+50142922 | Msa1330870:CDS |
TTAGAACTGAAATATATAAG+CGG | 0.627448 | 8_4:+50142092 | Msa1330870:CDS |
AGGCCTAGGAATGATGTCAT+CGG | 0.630434 | 8_4:-50140216 | None:intergenic |
CCGTGCGTCTTATTTGCAGA+GGG | 0.630926 | 8_4:+50145063 | Msa1330870:CDS |
CCAACGTCTCGAACTGAACA+CGG | 0.635423 | 8_4:-50140112 | None:intergenic |
CTCATGCAATCAGGACCGAT+GGG | 0.635720 | 8_4:-50140287 | None:intergenic |
CACCTTAGGAATTAAAGATG+AGG | 0.636864 | 8_4:+50142681 | Msa1330870:CDS |
GATTTCGAGAGCGAAGACGG+AGG | 0.642616 | 8_4:-50140051 | None:intergenic |
GCAGATATCAGAGAATGGAT+GGG | 0.645198 | 8_4:+50142241 | Msa1330870:CDS |
ATTTGTGGTGATAGGTCACA+TGG | 0.648197 | 8_4:-50145216 | None:intergenic |
CTTCTATGGTGCAACGACTG+AGG | 0.648233 | 8_4:+50145012 | Msa1330870:CDS |
AGTTTGAATCAATTATGGCA+CGG | 0.648573 | 8_4:-50144841 | None:intergenic |
AGCATGAACCAAATGTGCGG+TGG | 0.651334 | 8_4:-50144624 | None:intergenic |
GAAAATCCAATGGACTACAC+AGG | 0.652832 | 8_4:+50144293 | Msa1330870:CDS |
ATGAGCCTCTAAAATATGTG+AGG | 0.655312 | 8_4:+50141789 | Msa1330870:CDS |
AATTAAATCCACATCTTGAG+GGG | 0.658323 | 8_4:-50142350 | None:intergenic |
TACTCCGCGAGATTTCCAGT+TGG | 0.659482 | 8_4:-50140087 | None:intergenic |
GGATATATCAGAAAATGGCG+GGG | 0.662600 | 8_4:+50141327 | Msa1330870:CDS |
GCCATAAGTTGATATTCATG+CGG | 0.666800 | 8_4:-50145181 | None:intergenic |
GCTTGAAACCTCAAATCATG+TGG | 0.667801 | 8_4:+50141946 | Msa1330870:CDS |
AAGGATATATCAGAAAATGG+CGG | 0.669867 | 8_4:+50141325 | Msa1330870:CDS |
GGACCATAAGGTGACACTAG+AGG | 0.679180 | 8_4:+50144334 | Msa1330870:CDS |
GTCAGCATGAACCAAATGTG+CGG | 0.682533 | 8_4:-50144627 | None:intergenic |
TACACCAACTGGAAATCTCG+CGG | 0.683114 | 8_4:+50140083 | Msa1330870:CDS |
CGATACCTCGAAACCACCGT+TGG | 0.683116 | 8_4:+50140023 | Msa1330870:CDS |
ACCTTATGGTCCATTATACG+AGG | 0.683594 | 8_4:-50144323 | None:intergenic |
CTTTAAAGTTGAGAAGTCAG+TGG | 0.685540 | 8_4:-50141426 | None:intergenic |
CCTAGGAATGATGTCATCGG+AGG | 0.687166 | 8_4:-50140213 | None:intergenic |
TTCGGATGAAGGAATCACCA+TGG | 0.700240 | 8_4:-50139943 | None:intergenic |
CCTTCTCTGCTAGTCAACTG+CGG | 0.703161 | 8_4:+50142173 | Msa1330870:CDS |
AAGCTATTATGGGACAGGAG+GGG | 0.709108 | 8_4:-50145317 | None:intergenic |
AGTGTGCTTCAATCATGGGA+AGG | 0.715224 | 8_4:+50140308 | Msa1330870:CDS |
CTGCACATTTGGAAACACTG+CGG | 0.755401 | 8_4:-50142279 | None:intergenic |
AAGGCAATAAATCTTTGACG+GGG | 0.771887 | 8_4:-50141915 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAATAGAAAAAGAAAA+AGG | - | chr8_4:50143403-50143422 | None:intergenic | 10.0% |
!!! | CATCTAAATAATTTATTTTA+AGG | + | chr8_4:50145523-50145542 | Msa1330870:three_prime_UTR | 10.0% |
!!! | AATTCCTTTTGAAAATATTT+TGG | + | chr8_4:50140409-50140428 | Msa1330870:CDS | 15.0% |
!! | TATAAGTTGTTTATACAAAT+TGG | + | chr8_4:50141122-50141141 | Msa1330870:intron | 15.0% |
!! | ATAAGTTGTTTATACAAATT+GGG | + | chr8_4:50141123-50141142 | Msa1330870:intron | 15.0% |
!! | ATGATAATTTCTTAAAAGAA+TGG | - | chr8_4:50142552-50142571 | None:intergenic | 15.0% |
!!! | TCATAAAAGTTTAATTTGTT+AGG | - | chr8_4:50143905-50143924 | None:intergenic | 15.0% |
!! | TTCAGATTTATTTAGAAAAA+CGG | - | chr8_4:50143996-50144015 | None:intergenic | 15.0% |
!! | ACATTATTTGTTTATGTGTT+AGG | + | chr8_4:50140490-50140509 | Msa1330870:intron | 20.0% |
!! | CATTATTTGTTTATGTGTTA+GGG | + | chr8_4:50140491-50140510 | Msa1330870:intron | 20.0% |
!! | ATTTGATACCATGTTAAATA+TGG | - | chr8_4:50140760-50140779 | None:intergenic | 20.0% |
!! | TTTGATGTATAAATGTGTTT+GGG | + | chr8_4:50140882-50140901 | Msa1330870:intron | 20.0% |
!! | AAATCACTCAAATTGAAATA+AGG | - | chr8_4:50141178-50141197 | None:intergenic | 20.0% |
!!! | ATTTCAATTTGAGTGATTTT+TGG | + | chr8_4:50141179-50141198 | Msa1330870:intron | 20.0% |
!!! | TTTCAATTTGAGTGATTTTT+GGG | + | chr8_4:50141180-50141199 | Msa1330870:intron | 20.0% |
!! | TAAATCAATAACAGAATGAA+AGG | - | chr8_4:50141232-50141251 | None:intergenic | 20.0% |
!! | GAAGAATAACAAAACATAAA+GGG | - | chr8_4:50141287-50141306 | None:intergenic | 20.0% |
!! | AGAAGAATAACAAAACATAA+AGG | - | chr8_4:50141288-50141307 | None:intergenic | 20.0% |
!!! | TTATATATTTCAGTTCTAAG+AGG | - | chr8_4:50142091-50142110 | None:intergenic | 20.0% |
!! | TTAGAACTGAAATATATAAG+CGG | + | chr8_4:50142092-50142111 | Msa1330870:CDS | 20.0% |
!!! | CAAAAACTAAGGAAAAATTT+TGG | + | chr8_4:50143019-50143038 | Msa1330870:intron | 20.0% |
!!! | TTCTTTTTCTCTCTTTTTAT+TGG | - | chr8_4:50143429-50143448 | None:intergenic | 20.0% |
!! | AATAAAAAGAGAGAAAAAGA+AGG | + | chr8_4:50143428-50143447 | Msa1330870:intron | 20.0% |
!!! | TAAAAGTTTAATTTGTTAGG+TGG | - | chr8_4:50143902-50143921 | None:intergenic | 20.0% |
!!! | AATTAAACTTTTATGAGTGT+TGG | + | chr8_4:50143909-50143928 | Msa1330870:intron | 20.0% |
!! | TCAGATTTATTTAGAAAAAC+GGG | - | chr8_4:50143995-50144014 | None:intergenic | 20.0% |
!! | AGTGTTTCTTTAAACAAAAT+TGG | + | chr8_4:50144503-50144522 | Msa1330870:intron | 20.0% |
!! | TCATGTAATCAACAAAAAAT+TGG | - | chr8_4:50144580-50144599 | None:intergenic | 20.0% |
!! | GTAAATGTAAAAGCTATTAT+GGG | - | chr8_4:50145330-50145349 | None:intergenic | 20.0% |
!! | TGTAAATGTAAAAGCTATTA+TGG | - | chr8_4:50145331-50145350 | None:intergenic | 20.0% |
!! | TAGTTTCCAAATATAAGTTA+TGG | + | chr8_4:50145379-50145398 | Msa1330870:three_prime_UTR | 20.0% |
!! | CACTCCAAAATATTTTCAAA+AGG | - | chr8_4:50140416-50140435 | None:intergenic | 25.0% |
!!! | AAAATATTTTGGAGTGTGAT+GGG | + | chr8_4:50140420-50140439 | Msa1330870:CDS | 25.0% |
! | ACTTATTGTTGAAGTTGTAT+TGG | + | chr8_4:50140640-50140659 | Msa1330870:intron | 25.0% |
! | ATCTAAGTCCATATTTAACA+TGG | + | chr8_4:50140749-50140768 | Msa1330870:intron | 25.0% |
! | TTTAACATGGTATCAAATCT+AGG | + | chr8_4:50140762-50140781 | Msa1330870:intron | 25.0% |
! | TAGGTTAAGAATTGCAATAT+GGG | + | chr8_4:50140781-50140800 | Msa1330870:intron | 25.0% |
! | GTTTGATGTATAAATGTGTT+TGG | + | chr8_4:50140881-50140900 | Msa1330870:intron | 25.0% |
! | CATAATTTCCCAAAAAAATG+AGG | - | chr8_4:50141468-50141487 | None:intergenic | 25.0% |
!!! | CTCATTTTTTTGGGAAATTA+TGG | + | chr8_4:50141466-50141485 | Msa1330870:CDS | 25.0% |
! | TATGAACAAGAGAATTCAAT+TGG | - | chr8_4:50141652-50141671 | None:intergenic | 25.0% |
!! | AATCTCAATCACTTTGAAAA+AGG | + | chr8_4:50142051-50142070 | Msa1330870:CDS | 25.0% |
!! | ATCTCAATCACTTTGAAAAA+GGG | + | chr8_4:50142052-50142071 | Msa1330870:CDS | 25.0% |
! | TAGAACTGAAATATATAAGC+GGG | + | chr8_4:50142093-50142112 | Msa1330870:CDS | 25.0% |
! | TATTGAATATTCTTCGAGAT+GGG | + | chr8_4:50142116-50142135 | Msa1330870:CDS | 25.0% |
!!! | GATGTTTTGGAAAGTTTAAA+TGG | + | chr8_4:50142775-50142794 | Msa1330870:CDS | 25.0% |
!!! | ATTTTGGAGATGAAAACTTA+AGG | + | chr8_4:50143035-50143054 | Msa1330870:intron | 25.0% |
! | AGTGAAGAATTAGAAGAAAA+GGG | + | chr8_4:50143163-50143182 | Msa1330870:CDS | 25.0% |
! | AAACCATTATATACATACCT+AGG | - | chr8_4:50143223-50143242 | None:intergenic | 25.0% |
! | TTATTACAATCAAATGCAGT+TGG | - | chr8_4:50143252-50143271 | None:intergenic | 25.0% |
! | AAAAAGAAAAAGGAAGATAG+AGG | - | chr8_4:50143393-50143412 | None:intergenic | 25.0% |
! | TCACAAAAGTTGTTATCAAA+TGG | + | chr8_4:50143454-50143473 | Msa1330870:intron | 25.0% |
! | TAAGAAATTGAGTTAAGTAG+AGG | - | chr8_4:50143653-50143672 | None:intergenic | 25.0% |
! | GTAAACAACATGTAACATAT+TGG | - | chr8_4:50143749-50143768 | None:intergenic | 25.0% |
! | CATATACCTTGTTAGATATT+AGG | + | chr8_4:50143873-50143892 | Msa1330870:intron | 25.0% |
! | CAGATTTATTTAGAAAAACG+GGG | - | chr8_4:50143994-50144013 | None:intergenic | 25.0% |
! | ATTCTAACATAAAGTAGACT+AGG | + | chr8_4:50144037-50144056 | Msa1330870:intron | 25.0% |
!!! | GGATTTATTTTTCATAAGCT+GGG | + | chr8_4:50144244-50144263 | Msa1330870:CDS | 25.0% |
! | TTACATGATCAATGATACTT+TGG | + | chr8_4:50144592-50144611 | Msa1330870:CDS | 25.0% |
! | TACATGATCAATGATACTTT+GGG | + | chr8_4:50144593-50144612 | Msa1330870:CDS | 25.0% |
! | AAACCTATGTATATATCCAA+AGG | + | chr8_4:50144800-50144819 | Msa1330870:CDS | 25.0% |
!! | TATATATCCAAAGGTGTATT+AGG | + | chr8_4:50144809-50144828 | Msa1330870:CDS | 25.0% |
! | TTGCAAGTTTGAATCAATTA+TGG | - | chr8_4:50144849-50144868 | None:intergenic | 25.0% |
!! | AACTAAGCTACAATCTTTTT+AGG | - | chr8_4:50145364-50145383 | None:intergenic | 25.0% |
! | ATGTCTCCATAACTTATATT+TGG | - | chr8_4:50145388-50145407 | None:intergenic | 25.0% |
! | GAGATAATGATTGATTAAGA+GGG | - | chr8_4:50145502-50145521 | None:intergenic | 25.0% |
! | AGAGATAATGATTGATTAAG+AGG | - | chr8_4:50145503-50145522 | None:intergenic | 25.0% |
!! | TTAAAATGTTTAAAGAGTGC+CGG | - | chr8_4:50145565-50145584 | None:intergenic | 25.0% |
TGTTTCTTTCAACTTTGGTT+TGG | - | chr8_4:50139887-50139906 | None:intergenic | 30.0% | |
AAGTGTGTTTCTTTCAACTT+TGG | - | chr8_4:50139892-50139911 | None:intergenic | 30.0% | |
!!! | GAAAATATTTTGGAGTGTGA+TGG | + | chr8_4:50140419-50140438 | Msa1330870:CDS | 30.0% |
ATAATGTACCTTCAAGAGAA+GGG | - | chr8_4:50140477-50140496 | None:intergenic | 30.0% | |
AATAATGTACCTTCAAGAGA+AGG | - | chr8_4:50140478-50140497 | None:intergenic | 30.0% | |
!! | TGGACTTATTTTCAGCTTAT+TGG | + | chr8_4:50140525-50140544 | Msa1330870:intron | 30.0% |
TTTGGATGTGTAAATGTGTT+TGG | + | chr8_4:50140690-50140709 | Msa1330870:intron | 30.0% | |
TTGGATGTGTAAATGTGTTT+GGG | + | chr8_4:50140691-50140710 | Msa1330870:intron | 30.0% | |
CTAGGTTAAGAATTGCAATA+TGG | + | chr8_4:50140780-50140799 | Msa1330870:intron | 30.0% | |
AAGAATTGCAATATGGGAAT+TGG | + | chr8_4:50140787-50140806 | Msa1330870:intron | 30.0% | |
TCAGATAAGTGTGTATGTAT+AGG | - | chr8_4:50141089-50141108 | None:intergenic | 30.0% | |
ATACACACTTATCTGATAAG+CGG | + | chr8_4:50141093-50141112 | Msa1330870:intron | 30.0% | |
AAGGATATATCAGAAAATGG+CGG | + | chr8_4:50141325-50141344 | Msa1330870:CDS | 30.0% | |
ATACCTATCATCCTTAAACT+TGG | - | chr8_4:50141366-50141385 | None:intergenic | 30.0% | |
!!! | TGATAGGTATCGATTTTGTA+AGG | + | chr8_4:50141376-50141395 | Msa1330870:CDS | 30.0% |
!!! | AGGAGAATTTTGAGTTTATG+TGG | + | chr8_4:50141396-50141415 | Msa1330870:CDS | 30.0% |
!!! | GGAGAATTTTGAGTTTATGT+GGG | + | chr8_4:50141397-50141416 | Msa1330870:CDS | 30.0% |
!! | TTCTCAACTTTAAAGTCCAT+TGG | + | chr8_4:50141434-50141453 | Msa1330870:CDS | 30.0% |
!! | TCTCAACTTTAAAGTCCATT+GGG | + | chr8_4:50141435-50141454 | Msa1330870:CDS | 30.0% |
! | TGAAGCAAGACTAATTTTCT+GGG | - | chr8_4:50141675-50141694 | None:intergenic | 30.0% |
GTATTGAATATTCTTCGAGA+TGG | + | chr8_4:50142115-50142134 | Msa1330870:CDS | 30.0% | |
AATTAAATCCACATCTTGAG+GGG | - | chr8_4:50142353-50142372 | None:intergenic | 30.0% | |
GAATTAAATCCACATCTTGA+GGG | - | chr8_4:50142354-50142373 | None:intergenic | 30.0% | |
TTCCTTCAGCATTTCAAATT+CGG | + | chr8_4:50142491-50142510 | Msa1330870:CDS | 30.0% | |
TAAACTTTCCAAAACATCCA+AGG | - | chr8_4:50142773-50142792 | None:intergenic | 30.0% | |
! | TGCTTTTCAAATCAGATAAC+TGG | - | chr8_4:50142900-50142919 | None:intergenic | 30.0% |
CAGTGAAGAATTAGAAGAAA+AGG | + | chr8_4:50143162-50143181 | Msa1330870:CDS | 30.0% | |
TTACTCTTGACATTAATCCT+TGG | + | chr8_4:50143491-50143510 | Msa1330870:intron | 30.0% | |
AGATGTGCTTTCTTTAACAA+CGG | + | chr8_4:50143516-50143535 | Msa1330870:intron | 30.0% | |
TTTGGGGATGAAAGTTAAAA+GGG | + | chr8_4:50143580-50143599 | Msa1330870:intron | 30.0% | |
CTAATTGATATGCAATGCAA+TGG | - | chr8_4:50143618-50143637 | None:intergenic | 30.0% | |
AATGATAACTGAGTAAGTAG+AGG | - | chr8_4:50143688-50143707 | None:intergenic | 30.0% | |
TCTACTTACTCAGTTATCAT+TGG | + | chr8_4:50143687-50143706 | Msa1330870:intron | 30.0% | |
AAACAATGAATCTAAGGATC+TGG | - | chr8_4:50143814-50143833 | None:intergenic | 30.0% | |
AGATCCTTAGATTCATTGTT+TGG | + | chr8_4:50143813-50143832 | Msa1330870:intron | 30.0% | |
ATTTATTTAGAAAAACGGGG+TGG | - | chr8_4:50143991-50144010 | None:intergenic | 30.0% | |
TATTGCTTTCTAATACTTGC+TGG | + | chr8_4:50144174-50144193 | Msa1330870:intron | 30.0% | |
ATTGCTTTCTAATACTTGCT+GGG | + | chr8_4:50144175-50144194 | Msa1330870:intron | 30.0% | |
!! | GGGATTTATTTTTCATAAGC+TGG | + | chr8_4:50144243-50144262 | Msa1330870:CDS | 30.0% |
AAAAATGTATCTGCATGTGT+CGG | - | chr8_4:50144438-50144457 | None:intergenic | 30.0% | |
ACTAAAATAGACACAGACAT+CGG | - | chr8_4:50144486-50144505 | None:intergenic | 30.0% | |
ACACCTTTGGATATATACAT+AGG | - | chr8_4:50144806-50144825 | None:intergenic | 30.0% | |
AGTTTGAATCAATTATGGCA+CGG | - | chr8_4:50144844-50144863 | None:intergenic | 30.0% | |
TTGATTCAAACTTGCAAGTA+AGG | + | chr8_4:50144852-50144871 | Msa1330870:CDS | 30.0% | |
ATACTTATCTCTGTGACTTA+TGG | - | chr8_4:50144966-50144985 | None:intergenic | 30.0% | |
TCGAATTCTAATCTCAGTAA+AGG | + | chr8_4:50145114-50145133 | Msa1330870:CDS | 30.0% | |
GTTGTAATATTTGTGGTGAT+AGG | - | chr8_4:50145227-50145246 | None:intergenic | 30.0% | |
AGCTTTCGTTGTAATATTTG+TGG | - | chr8_4:50145234-50145253 | None:intergenic | 30.0% | |
GTCATACTCATACTACAAAA+TGG | - | chr8_4:50145412-50145431 | None:intergenic | 30.0% | |
!! | GACATAACTTTTGATGACAT+TGG | + | chr8_4:50145459-50145478 | Msa1330870:three_prime_UTR | 30.0% |
AAGGAGAAGTTTCTTGTTCT+CGG | - | chr8_4:50140165-50140184 | None:intergenic | 35.0% | |
! | TTTATGTGTTAGGGCTTGTT+TGG | + | chr8_4:50140500-50140519 | Msa1330870:intron | 35.0% |
TATTGGAGTTCCAAATTGAC+CGG | + | chr8_4:50140657-50140676 | Msa1330870:intron | 35.0% | |
AAAGTTAGCTCAAACGATGA+CGG | - | chr8_4:50140720-50140739 | None:intergenic | 35.0% | |
! | TCATCGTTTGAGCTAACTTT+TGG | + | chr8_4:50140720-50140739 | Msa1330870:intron | 35.0% |
! | CATCGTTTGAGCTAACTTTT+GGG | + | chr8_4:50140721-50140740 | Msa1330870:intron | 35.0% |
GCAATATGGGAATTGGATTA+AGG | + | chr8_4:50140794-50140813 | Msa1330870:intron | 35.0% | |
!! | GATGGGTATTGAAGTTGTAT+TGG | + | chr8_4:50140832-50140851 | Msa1330870:intron | 35.0% |
AAAGTTAGCTCAAAGGATGA+GGG | - | chr8_4:50140910-50140929 | None:intergenic | 35.0% | |
AAAAGTTAGCTCAAAGGATG+AGG | - | chr8_4:50140911-50140930 | None:intergenic | 35.0% | |
! | TCATCCTTTGAGCTAACTTT+TGG | + | chr8_4:50140910-50140929 | Msa1330870:intron | 35.0% |
! | CATCCTTTGAGCTAACTTTT+GGG | + | chr8_4:50140911-50140930 | Msa1330870:intron | 35.0% |
TATGCTATCATGTAGAGCTT+TGG | - | chr8_4:50140997-50141016 | None:intergenic | 35.0% | |
!!! | TGAGTGATTTTTGGGTTTTG+AGG | + | chr8_4:50141188-50141207 | Msa1330870:intron | 35.0% |
!! | AAATCAGCTCTAGGTAACAA+TGG | - | chr8_4:50141264-50141283 | None:intergenic | 35.0% |
TATTCTTCTCAGCTGAGATA+TGG | + | chr8_4:50141299-50141318 | Msa1330870:intron | 35.0% | |
ATTCTTCTCAGCTGAGATAT+GGG | + | chr8_4:50141300-50141319 | Msa1330870:intron | 35.0% | |
GCCAAGGATATATCAGAAAA+TGG | + | chr8_4:50141322-50141341 | Msa1330870:CDS | 35.0% | |
!! | GCCATTTTCTGATATATCCT+TGG | - | chr8_4:50141326-50141345 | None:intergenic | 35.0% |
AGGATATATCAGAAAATGGC+GGG | + | chr8_4:50141326-50141345 | Msa1330870:CDS | 35.0% | |
TTAAACTTGGCAGCTACATT+TGG | - | chr8_4:50141353-50141372 | None:intergenic | 35.0% | |
AAATGTAGCTGCCAAGTTTA+AGG | + | chr8_4:50141352-50141371 | Msa1330870:CDS | 35.0% | |
!! | CTTTAAAGTTGAGAAGTCAG+TGG | - | chr8_4:50141429-50141448 | None:intergenic | 35.0% |
!!! | GCACTCAACCTCATTTTTTT+GGG | + | chr8_4:50141457-50141476 | Msa1330870:CDS | 35.0% |
TTCAAATTCTCTCTGTAGAG+CGG | - | chr8_4:50141527-50141546 | None:intergenic | 35.0% | |
GAATTTGAAGGATCTAAGTC+TGG | + | chr8_4:50141538-50141557 | Msa1330870:CDS | 35.0% | |
GATTCCAAGTTACCTTATGA+GGG | + | chr8_4:50141620-50141639 | Msa1330870:CDS | 35.0% | |
AATTGGAAAAGACCCTCATA+AGG | - | chr8_4:50141635-50141654 | None:intergenic | 35.0% | |
! | CTGAAGCAAGACTAATTTTC+TGG | - | chr8_4:50141676-50141695 | None:intergenic | 35.0% |
!! | TGATGAGTTGATTGACTTGT+TGG | + | chr8_4:50141700-50141719 | Msa1330870:CDS | 35.0% |
!! | TTTTAGAGGCTCATAACAAG+TGG | - | chr8_4:50141783-50141802 | None:intergenic | 35.0% |
!! | ATGAGCCTCTAAAATATGTG+AGG | + | chr8_4:50141789-50141808 | Msa1330870:CDS | 35.0% |
!! | TGAGTCCTCACATATTTTAG+AGG | - | chr8_4:50141797-50141816 | None:intergenic | 35.0% |
AAGGCAATAAATCTTTGACG+GGG | - | chr8_4:50141918-50141937 | None:intergenic | 35.0% | |
CAAGGCAATAAATCTTTGAC+GGG | - | chr8_4:50141919-50141938 | None:intergenic | 35.0% | |
CCAAGGCAATAAATCTTTGA+CGG | - | chr8_4:50141920-50141939 | None:intergenic | 35.0% | |
! | ATGATTTGAGGTTTCAAGCT+CGG | - | chr8_4:50141945-50141964 | None:intergenic | 35.0% |
ATGCTTTACCACATGATTTG+AGG | - | chr8_4:50141957-50141976 | None:intergenic | 35.0% | |
!! | TCATGTGGTAAAGCATTTTG+CGG | + | chr8_4:50141961-50141980 | Msa1330870:CDS | 35.0% |
TTACATTTGTCGAAGAGGAT+TGG | + | chr8_4:50142008-50142027 | Msa1330870:CDS | 35.0% | |
GTGATTGAGATTGCATTGTT+TGG | - | chr8_4:50142043-50142062 | None:intergenic | 35.0% | |
TGAAAAAGGGAATGTTCTCA+AGG | + | chr8_4:50142065-50142084 | Msa1330870:CDS | 35.0% | |
GGAATTAAATCCACATCTTG+AGG | - | chr8_4:50142355-50142374 | None:intergenic | 35.0% | |
TCAGAGGTGATTTCAATATC+TGG | - | chr8_4:50142376-50142395 | None:intergenic | 35.0% | |
GATATTGAAATCACCTCTGA+TGG | + | chr8_4:50142376-50142395 | Msa1330870:CDS | 35.0% | |
! | ATAGACTACTGTTTCTCAGA+TGG | + | chr8_4:50142400-50142419 | Msa1330870:CDS | 35.0% |
! | TACTGTTTCTCAGATGGTAT+TGG | + | chr8_4:50142406-50142425 | Msa1330870:CDS | 35.0% |
! | AAATTTCACAGTCTTTTGCC+AGG | + | chr8_4:50142431-50142450 | Msa1330870:CDS | 35.0% |
! | TACCGAATTTGAAATGCTGA+AGG | - | chr8_4:50142496-50142515 | None:intergenic | 35.0% |
TCAGCATTTCAAATTCGGTA+TGG | + | chr8_4:50142496-50142515 | Msa1330870:CDS | 35.0% | |
!! | ATTCGGTATGGTGGATATAA+AGG | + | chr8_4:50142508-50142527 | Msa1330870:CDS | 35.0% |
CTCATCTTTAATTCCTAAGG+TGG | - | chr8_4:50142683-50142702 | None:intergenic | 35.0% | |
CACCTTAGGAATTAAAGATG+AGG | + | chr8_4:50142681-50142700 | Msa1330870:CDS | 35.0% | |
!! | AATTAAAGATGAGGCGCTTT+TGG | + | chr8_4:50142690-50142709 | Msa1330870:CDS | 35.0% |
! | AGGAAAGATGTTGACTGATA+AGG | + | chr8_4:50142741-50142760 | Msa1330870:CDS | 35.0% |
!! | CATAGGTTTTATGAGCCAAA+CGG | + | chr8_4:50142832-50142851 | Msa1330870:CDS | 35.0% |
TTGAGCATCATTGATAGGTA+AGG | - | chr8_4:50142862-50142881 | None:intergenic | 35.0% | |
TTACCTATCAATGATGCTCA+AGG | + | chr8_4:50142861-50142880 | Msa1330870:CDS | 35.0% | |
! | TAGTTTTTGCCACAGTTATG+CGG | - | chr8_4:50143008-50143027 | None:intergenic | 35.0% |
CATAACTGTGGCAAAAACTA+AGG | + | chr8_4:50143008-50143027 | Msa1330870:intron | 35.0% | |
AGATGAAAACTTAAGGAACG+TGG | + | chr8_4:50143042-50143061 | Msa1330870:intron | 35.0% | |
GATAGCACACGTATTATAGT+AGG | + | chr8_4:50143073-50143092 | Msa1330870:intron | 35.0% | |
CACACGTATTATAGTAGGTA+AGG | + | chr8_4:50143078-50143097 | Msa1330870:intron | 35.0% | |
ACGTATTATAGTAGGTAAGG+TGG | + | chr8_4:50143081-50143100 | Msa1330870:intron | 35.0% | |
AATTAGAAGAAAAGGGCTTG+AGG | + | chr8_4:50143170-50143189 | Msa1330870:CDS | 35.0% | |
ATTAGAAGAAAAGGGCTTGA+GGG | + | chr8_4:50143171-50143190 | Msa1330870:CDS | 35.0% | |
TGCCTTGTATTTCCACAAAA+AGG | + | chr8_4:50143196-50143215 | Msa1330870:CDS | 35.0% | |
! | GTCCTTTTTGTGGAAATACA+AGG | - | chr8_4:50143201-50143220 | None:intergenic | 35.0% |
TATTTCCACAAAAAGGACCT+AGG | + | chr8_4:50143203-50143222 | Msa1330870:CDS | 35.0% | |
GGACCTAGGTATGTATATAA+TGG | + | chr8_4:50143217-50143236 | Msa1330870:intron | 35.0% | |
! | AAACATCTTGTGACGACTTT+TGG | + | chr8_4:50143331-50143350 | Msa1330870:intron | 35.0% |
ATCATGCACCAACAAAAGAA+GGG | + | chr8_4:50143549-50143568 | Msa1330870:intron | 35.0% | |
! | CTTTGGGGATGAAAGTTAAA+AGG | + | chr8_4:50143579-50143598 | Msa1330870:intron | 35.0% |
TGGCTATGCAAAACAATCTT+AGG | + | chr8_4:50143707-50143726 | Msa1330870:intron | 35.0% | |
GGCTATGCAAAACAATCTTA+GGG | + | chr8_4:50143708-50143727 | Msa1330870:intron | 35.0% | |
GCTATGCAAAACAATCTTAG+GGG | + | chr8_4:50143709-50143728 | Msa1330870:intron | 35.0% | |
ATGAGGACAGCAAAACTTAA+GGG | - | chr8_4:50143783-50143802 | None:intergenic | 35.0% | |
TCCTTAGATTCATTGTTTGG+TGG | + | chr8_4:50143816-50143835 | Msa1330870:intron | 35.0% | |
TCCACCAAACAATGAATCTA+AGG | - | chr8_4:50143820-50143839 | None:intergenic | 35.0% | |
TGGAAGCCTAATATCTAACA+AGG | - | chr8_4:50143882-50143901 | None:intergenic | 35.0% | |
!!! | ACTTTTATGAGTGTTGGTAC+TGG | + | chr8_4:50143915-50143934 | Msa1330870:intron | 35.0% |
! | TTGGATTTTCAGTTTGAGCT+GGG | - | chr8_4:50144283-50144302 | None:intergenic | 35.0% |
! | ATTGGATTTTCAGTTTGAGC+TGG | - | chr8_4:50144284-50144303 | None:intergenic | 35.0% |
AGCTCAAACTGAAAATCCAA+TGG | + | chr8_4:50144283-50144302 | Msa1330870:CDS | 35.0% | |
CAAGTACAAAGTATGCAACT+TGG | - | chr8_4:50144371-50144390 | None:intergenic | 35.0% | |
GCAACAGCAACAAACATATA+AGG | - | chr8_4:50144545-50144564 | None:intergenic | 35.0% | |
TCTCTTGGTTTCAAAGATCT+TGG | - | chr8_4:50144752-50144771 | None:intergenic | 35.0% | |
ATGAAATCTGGAAACTCTCT+TGG | - | chr8_4:50144767-50144786 | None:intergenic | 35.0% | |
AAGAGAGTTTCCAGATTTCA+TGG | + | chr8_4:50144766-50144785 | Msa1330870:CDS | 35.0% | |
! | GAGTTTTCCTAATACACCTT+TGG | - | chr8_4:50144819-50144838 | None:intergenic | 35.0% |
ATCTCTTTGATGAGCTTCTA+TGG | + | chr8_4:50144998-50145017 | Msa1330870:CDS | 35.0% | |
!! | GCCATAAGTTGATATTCATG+CGG | - | chr8_4:50145184-50145203 | None:intergenic | 35.0% |
CCATGGAAAGCTTAAAAAAG+TGG | - | chr8_4:50145257-50145276 | None:intergenic | 35.0% | |
!!! | CCACTTTTTTAAGCTTTCCA+TGG | + | chr8_4:50145254-50145273 | Msa1330870:CDS | 35.0% |
! | TTAAGCTTTCCATGGATTGT+CGG | + | chr8_4:50145262-50145281 | Msa1330870:CDS | 35.0% |
TGTAAAAGCTATTATGGGAC+AGG | - | chr8_4:50145325-50145344 | None:intergenic | 35.0% | |
GAGTATGACATGTTCATCTA+CGG | + | chr8_4:50145423-50145442 | Msa1330870:three_prime_UTR | 35.0% | |
AGTATGACATGTTCATCTAC+GGG | + | chr8_4:50145424-50145443 | Msa1330870:three_prime_UTR | 35.0% | |
TGAAGGAATCACCATGGTTA+GGG | - | chr8_4:50139940-50139959 | None:intergenic | 40.0% | |
ATGAAGGAATCACCATGGTT+AGG | - | chr8_4:50139941-50139960 | None:intergenic | 40.0% | |
GATGGGAAAACCAGCATAAA+GGG | - | chr8_4:50140273-50140292 | None:intergenic | 40.0% | |
!!! | CTTTATGCTGGTTTTCCCAT+CGG | + | chr8_4:50140272-50140291 | Msa1330870:CDS | 40.0% |
CATGAGTGTGCTTCAATCAT+GGG | + | chr8_4:50140304-50140323 | Msa1330870:CDS | 40.0% | |
AAATCAAGTCTCTGCCTTTC+AGG | - | chr8_4:50140353-50140372 | None:intergenic | 40.0% | |
AAAGGCAGAGACTTGATTTC+TGG | + | chr8_4:50140354-50140373 | Msa1330870:CDS | 40.0% | |
AAGGCAGAGACTTGATTTCT+GGG | + | chr8_4:50140355-50140374 | Msa1330870:CDS | 40.0% | |
! | GATGGGTATTGTTCTGATGA+AGG | + | chr8_4:50140437-50140456 | Msa1330870:CDS | 40.0% |
AAGTTAGCTCAAACGATGAC+GGG | - | chr8_4:50140719-50140738 | None:intergenic | 40.0% | |
CATCCCAAAAGTTAGCTCAA+AGG | - | chr8_4:50140727-50140746 | None:intergenic | 40.0% | |
CATAAAGGGAAATCAGCTCT+AGG | - | chr8_4:50141273-50141292 | None:intergenic | 40.0% | |
GGATATATCAGAAAATGGCG+GGG | + | chr8_4:50141327-50141346 | Msa1330870:CDS | 40.0% | |
CTGCCAAGTTTAAGGATGAT+AGG | + | chr8_4:50141360-50141379 | Msa1330870:CDS | 40.0% | |
!!! | GGCACTCAACCTCATTTTTT+TGG | + | chr8_4:50141456-50141475 | Msa1330870:CDS | 40.0% |
TCAAATTCTCTCTGTAGAGC+GGG | - | chr8_4:50141526-50141545 | None:intergenic | 40.0% | |
GCTCTACAGAGAGAATTTGA+AGG | + | chr8_4:50141526-50141545 | Msa1330870:CDS | 40.0% | |
AAGGATCTAAGTCTGGAAGA+TGG | + | chr8_4:50141545-50141564 | Msa1330870:CDS | 40.0% | |
GGATTCCAAGTTACCTTATG+AGG | + | chr8_4:50141619-50141638 | Msa1330870:CDS | 40.0% | |
AAGACCCTCATAAGGTAACT+TGG | - | chr8_4:50141627-50141646 | None:intergenic | 40.0% | |
!! | GATTGACTTGTTGGTAAGCT+TGG | + | chr8_4:50141709-50141728 | Msa1330870:CDS | 40.0% |
AAGCTTGGATGCAGAAACTA+AGG | + | chr8_4:50141724-50141743 | Msa1330870:CDS | 40.0% | |
TTCTCCCATCGCAACAAAAA+AGG | + | chr8_4:50141849-50141868 | Msa1330870:CDS | 40.0% | |
!!! | CCAACCTTTTTTGTTGCGAT+GGG | - | chr8_4:50141856-50141875 | None:intergenic | 40.0% |
!!! | ACCAACCTTTTTTGTTGCGA+TGG | - | chr8_4:50141857-50141876 | None:intergenic | 40.0% |
ATCGCAACAAAAAAGGTTGG+TGG | + | chr8_4:50141856-50141875 | Msa1330870:CDS | 40.0% | |
AATCTTTGACGGGGTAATCA+AGG | - | chr8_4:50141909-50141928 | None:intergenic | 40.0% | |
CCGTCAAAGATTTATTGCCT+TGG | + | chr8_4:50141917-50141936 | Msa1330870:CDS | 40.0% | |
! | TGATTTGAGGTTTCAAGCTC+GGG | - | chr8_4:50141944-50141963 | None:intergenic | 40.0% |
GCTTGAAACCTCAAATCATG+TGG | + | chr8_4:50141946-50141965 | Msa1330870:CDS | 40.0% | |
CATATGCTTCAGACTTCATG+AGG | + | chr8_4:50141984-50142003 | Msa1330870:CDS | 40.0% | |
GAGGATTACATTTGTCGAAG+AGG | + | chr8_4:50142003-50142022 | Msa1330870:CDS | 40.0% | |
AACTGCGGTCAAATTCTGTT+TGG | + | chr8_4:50142188-50142207 | Msa1330870:CDS | 40.0% | |
AAGCAGCAGATATCAGAGAA+TGG | + | chr8_4:50142236-50142255 | Msa1330870:CDS | 40.0% | |
AGCAGATATCAGAGAATGGA+TGG | + | chr8_4:50142240-50142259 | Msa1330870:CDS | 40.0% | |
GCAGATATCAGAGAATGGAT+GGG | + | chr8_4:50142241-50142260 | Msa1330870:CDS | 40.0% | |
TTCCAAATGTGCAGCAAGAA+TGG | + | chr8_4:50142288-50142307 | Msa1330870:CDS | 40.0% | |
TCCAAATGTGCAGCAAGAAT+GGG | + | chr8_4:50142289-50142308 | Msa1330870:CDS | 40.0% | |
!! | GTCCAGGCAAACTTTTGAAA+TGG | + | chr8_4:50142327-50142346 | Msa1330870:CDS | 40.0% |
ACAGTAGTCTATACCATCAG+AGG | - | chr8_4:50142392-50142411 | None:intergenic | 40.0% | |
GCATTTCAAATTCGGTATGG+TGG | + | chr8_4:50142499-50142518 | Msa1330870:CDS | 40.0% | |
!! | GACGCAAAGCATTCTGTTTT+TGG | - | chr8_4:50142602-50142621 | None:intergenic | 40.0% |
GAATGCTTTGCGTCACTAAA+TGG | + | chr8_4:50142608-50142627 | Msa1330870:CDS | 40.0% | |
ATCTCTCGATTGAGAAAGCA+CGG | - | chr8_4:50142646-50142665 | None:intergenic | 40.0% | |
AATTCCTAAGGTGGACAACA+GGG | - | chr8_4:50142674-50142693 | None:intergenic | 40.0% | |
TAATTCCTAAGGTGGACAAC+AGG | - | chr8_4:50142675-50142694 | None:intergenic | 40.0% | |
CGCCTCATCTTTAATTCCTA+AGG | - | chr8_4:50142686-50142705 | None:intergenic | 40.0% | |
TTCTAGTCAAGATGCTGCAT+AGG | + | chr8_4:50142815-50142834 | Msa1330870:CDS | 40.0% | |
!! | GAGACTGGTCTATTGAACTA+TGG | + | chr8_4:50142970-50142989 | Msa1330870:intron | 40.0% |
CAGTTATGCGGACAAATACT+TGG | - | chr8_4:50142996-50143015 | None:intergenic | 40.0% | |
AGTATTTGTCCGCATAACTG+TGG | + | chr8_4:50142996-50143015 | Msa1330870:intron | 40.0% | |
GAAAACTTAAGGAACGTGGA+TGG | + | chr8_4:50143046-50143065 | Msa1330870:intron | 40.0% | |
! | ACATACCTAGGTCCTTTTTG+TGG | - | chr8_4:50143211-50143230 | None:intergenic | 40.0% |
! | AAAGAAAGCACATCTGACCA+AGG | - | chr8_4:50143511-50143530 | None:intergenic | 40.0% |
CATCATGCACCAACAAAAGA+AGG | + | chr8_4:50143548-50143567 | Msa1330870:intron | 40.0% | |
TCATGCACCAACAAAAGAAG+GGG | + | chr8_4:50143550-50143569 | Msa1330870:intron | 40.0% | |
! | AAAAGAAGGGGGCATATCTT+TGG | + | chr8_4:50143562-50143581 | Msa1330870:intron | 40.0% |
! | AAAGAAGGGGGCATATCTTT+GGG | + | chr8_4:50143563-50143582 | Msa1330870:intron | 40.0% |
AGTTAAAAGGGCCATTAGCT+AGG | + | chr8_4:50143592-50143611 | Msa1330870:intron | 40.0% | |
CATGAGGACAGCAAAACTTA+AGG | - | chr8_4:50143784-50143803 | None:intergenic | 40.0% | |
TTAGAAAAACGGGGTGGATA+AGG | - | chr8_4:50143985-50144004 | None:intergenic | 40.0% | |
GTAGACTAGGAAAACACAAC+AGG | + | chr8_4:50144050-50144069 | Msa1330870:intron | 40.0% | |
ACACAACAGGTTATTGCATG+AGG | + | chr8_4:50144063-50144082 | Msa1330870:intron | 40.0% | |
CACAACAGGTTATTGCATGA+GGG | + | chr8_4:50144064-50144083 | Msa1330870:intron | 40.0% | |
ACAACAGGTTATTGCATGAG+GGG | + | chr8_4:50144065-50144084 | Msa1330870:intron | 40.0% | |
!! | GAAAATCCAATGGACTACAC+AGG | + | chr8_4:50144293-50144312 | Msa1330870:CDS | 40.0% |
ACCTTATGGTCCATTATACG+AGG | - | chr8_4:50144326-50144345 | None:intergenic | 40.0% | |
TTACCTCTAGTGTCACCTTA+TGG | - | chr8_4:50144340-50144359 | None:intergenic | 40.0% | |
AAAATAGACACAGACATCGG+TGG | - | chr8_4:50144483-50144502 | None:intergenic | 40.0% | |
! | TATGTTTGTTGCTGTTGCGT+AGG | + | chr8_4:50144547-50144566 | Msa1330870:intron | 40.0% |
! | CTCCAGACATTTTCTACTCT+TGG | - | chr8_4:50144669-50144688 | None:intergenic | 40.0% |
! | GAGTAGAAAATGTCTGGAGT+TGG | + | chr8_4:50144670-50144689 | Msa1330870:CDS | 40.0% |
CTTTGCAAAATCAACTGCCA+TGG | - | chr8_4:50144708-50144727 | None:intergenic | 40.0% | |
!! | GCAGTTGATTTTGCAAAGAC+TGG | + | chr8_4:50144710-50144729 | Msa1330870:CDS | 40.0% |
AAAGATCTTGGCATTTCTGC+AGG | - | chr8_4:50144740-50144759 | None:intergenic | 40.0% | |
AGTTTCCAGATTTCATGGAG+AGG | + | chr8_4:50144771-50144790 | Msa1330870:CDS | 40.0% | |
TCAAACCTCTCCATGAAATC+TGG | - | chr8_4:50144779-50144798 | None:intergenic | 40.0% | |
CTGGTGATCATATGCTTCTT+TGG | - | chr8_4:50144906-50144925 | None:intergenic | 40.0% | |
CAAAACCATCAACTTCAAGC+TGG | - | chr8_4:50144925-50144944 | None:intergenic | 40.0% | |
!!! | GCTTGAAGTTGATGGTTTTG+AGG | + | chr8_4:50144925-50144944 | Msa1330870:CDS | 40.0% |
CTTATCTCTGTGACTTATGG+CGG | - | chr8_4:50144963-50144982 | None:intergenic | 40.0% | |
ACTGAGGATGAAATGCTAAC+TGG | + | chr8_4:50145028-50145047 | Msa1330870:CDS | 40.0% | |
CTTATTTGCAGAGGGATAAC+AGG | + | chr8_4:50145071-50145090 | Msa1330870:CDS | 40.0% | |
TTCAGCTGGAAGCTAAAGAA+TGG | + | chr8_4:50145140-50145159 | Msa1330870:CDS | 40.0% | |
GCCGCATGAATATCAACTTA+TGG | + | chr8_4:50145180-50145199 | Msa1330870:CDS | 40.0% | |
ATCAACTTATGGCATCTGCA+TGG | + | chr8_4:50145191-50145210 | Msa1330870:CDS | 40.0% | |
ATTTGTGGTGATAGGTCACA+TGG | - | chr8_4:50145219-50145238 | None:intergenic | 40.0% | |
AAAATGTCACCGACAATCCA+TGG | - | chr8_4:50145274-50145293 | None:intergenic | 40.0% | |
AAAGCTATTATGGGACAGGA+GGG | - | chr8_4:50145321-50145340 | None:intergenic | 40.0% | |
AAAAGCTATTATGGGACAGG+AGG | - | chr8_4:50145322-50145341 | None:intergenic | 40.0% | |
TTCGGATGAAGGAATCACCA+TGG | - | chr8_4:50139946-50139965 | None:intergenic | 45.0% | |
GAAGATTTCGAGAGCGAAGA+CGG | - | chr8_4:50140057-50140076 | None:intergenic | 45.0% | |
TACACCAACTGGAAATCTCG+CGG | + | chr8_4:50140083-50140102 | Msa1330870:CDS | 45.0% | |
AGGCCTAGGAATGATGTCAT+CGG | - | chr8_4:50140219-50140238 | None:intergenic | 45.0% | |
!! | AAAGGGCACCATTGTTGATG+CGG | - | chr8_4:50140256-50140275 | None:intergenic | 45.0% |
AACAATGGTGCCCTTTATGC+TGG | + | chr8_4:50140260-50140279 | Msa1330870:CDS | 45.0% | |
CGATGGGAAAACCAGCATAA+AGG | - | chr8_4:50140274-50140293 | None:intergenic | 45.0% | |
TGAAGCACACTCATGCAATC+AGG | - | chr8_4:50140299-50140318 | None:intergenic | 45.0% | |
GCATGAGTGTGCTTCAATCA+TGG | + | chr8_4:50140303-50140322 | Msa1330870:CDS | 45.0% | |
AGTGTGCTTCAATCATGGGA+AGG | + | chr8_4:50140308-50140327 | Msa1330870:CDS | 45.0% | |
! | ACTTGATTTCTGGGTCACTC+AGG | + | chr8_4:50140364-50140383 | Msa1330870:CDS | 45.0% |
! | CTTGATTTCTGGGTCACTCA+GGG | + | chr8_4:50140365-50140384 | Msa1330870:CDS | 45.0% |
! | GTGTTAGGGCTTGTTTGGAT+TGG | + | chr8_4:50140505-50140524 | Msa1330870:intron | 45.0% |
!! | TCCAAATTGACCGGCTTTTC+AGG | + | chr8_4:50140666-50140685 | Msa1330870:intron | 45.0% |
ACATCCAAAGCCTGAAAAGC+CGG | - | chr8_4:50140679-50140698 | None:intergenic | 45.0% | |
ATTAAGGACTCACGTCGTTG+AGG | + | chr8_4:50140810-50140829 | Msa1330870:intron | 45.0% | |
AAATGAGGTTGAGTGCCCAA+TGG | - | chr8_4:50141453-50141472 | None:intergenic | 45.0% | |
ACAAGCGGAACTGTTTCAGT+TGG | - | chr8_4:50141587-50141606 | None:intergenic | 45.0% | |
TCCAAACGACACTTGACAAG+CGG | - | chr8_4:50141602-50141621 | None:intergenic | 45.0% | |
CCCATCGCAACAAAAAAGGT+TGG | + | chr8_4:50141853-50141872 | Msa1330870:CDS | 45.0% | |
CTTCGAGATGGGATTCTAGT+TGG | + | chr8_4:50142127-50142146 | Msa1330870:CDS | 45.0% | |
CTGCACATTTGGAAACACTG+CGG | - | chr8_4:50142282-50142301 | None:intergenic | 45.0% | |
ACCCATTCTTGCTGCACATT+TGG | - | chr8_4:50142293-50142312 | None:intergenic | 45.0% | |
GGCCATTTCAAAAGTTTGCC+TGG | - | chr8_4:50142332-50142351 | None:intergenic | 45.0% | |
! | TAGCTTTTCTGCAAGTTGCC+TGG | - | chr8_4:50142452-50142471 | None:intergenic | 45.0% |
ATATCCCTGTTGTCCACCTT+AGG | + | chr8_4:50142667-50142686 | Msa1330870:CDS | 45.0% | |
GAGCCTTGAGCATCATTGAT+AGG | - | chr8_4:50142867-50142886 | None:intergenic | 45.0% | |
ATGCCGAATATTTGTGCCCA+AGG | + | chr8_4:50142921-50142940 | Msa1330870:CDS | 45.0% | |
TGCCGAATATTTGTGCCCAA+GGG | + | chr8_4:50142922-50142941 | Msa1330870:CDS | 45.0% | |
AAAAACCCTTGTCTTCACCC+AGG | + | chr8_4:50143112-50143131 | Msa1330870:intron | 45.0% | |
TATCTCCTGGGTGAAGACAA+GGG | - | chr8_4:50143120-50143139 | None:intergenic | 45.0% | |
ATATCTCCTGGGTGAAGACA+AGG | - | chr8_4:50143121-50143140 | None:intergenic | 45.0% | |
CAAGGACTCTGATATCTCCT+GGG | - | chr8_4:50143132-50143151 | None:intergenic | 45.0% | |
TCAAGGACTCTGATATCTCC+TGG | - | chr8_4:50143133-50143152 | None:intergenic | 45.0% | |
CTTCACTGTAGACAGCATCA+AGG | - | chr8_4:50143150-50143169 | None:intergenic | 45.0% | |
CATGCACCAACAAAAGAAGG+GGG | + | chr8_4:50143551-50143570 | Msa1330870:intron | 45.0% | |
! | GATATGCCCCCTTCTTTTGT+TGG | - | chr8_4:50143560-50143579 | None:intergenic | 45.0% |
! | AAGAAGGGGGCATATCTTTG+GGG | + | chr8_4:50143564-50143583 | Msa1330870:intron | 45.0% |
CAATGCAATGGCCTAGCTAA+TGG | - | chr8_4:50143606-50143625 | None:intergenic | 45.0% | |
AGGATCTGGTTATGTGCATG+AGG | - | chr8_4:50143800-50143819 | None:intergenic | 45.0% | |
! | CTAATACTTGCTGGGTCTAC+AGG | + | chr8_4:50144183-50144202 | Msa1330870:intron | 45.0% |
CTTCTTCCTGTGTAGTCCAT+TGG | - | chr8_4:50144302-50144321 | None:intergenic | 45.0% | |
!! | CAATGGACTACACAGGAAGA+AGG | + | chr8_4:50144300-50144319 | Msa1330870:CDS | 45.0% |
AGGAAGAAGGCCTCGTATAA+TGG | + | chr8_4:50144313-50144332 | Msa1330870:CDS | 45.0% | |
!! | GCCTCGTATAATGGACCATA+AGG | + | chr8_4:50144322-50144341 | Msa1330870:CDS | 45.0% |
GTCAGCATGAACCAAATGTG+CGG | - | chr8_4:50144630-50144649 | None:intergenic | 45.0% | |
!! | TCTTGGCCTTATCGTGTTCA+CGG | - | chr8_4:50144652-50144671 | None:intergenic | 45.0% |
GGCCAAGAGTAGAAAATGTC+TGG | + | chr8_4:50144664-50144683 | Msa1330870:CDS | 45.0% | |
GATCACCAGCTTGAAGTTGA+TGG | + | chr8_4:50144917-50144936 | Msa1330870:CDS | 45.0% | |
CAGAGGGATAACAGGAGATA+CGG | + | chr8_4:50145079-50145098 | Msa1330870:CDS | 45.0% | |
CAGGAGATACGGAGATATGA+AGG | + | chr8_4:50145090-50145109 | Msa1330870:CDS | 45.0% | |
CTCAGTAAAGGATCTTCAGC+TGG | + | chr8_4:50145126-50145145 | Msa1330870:CDS | 45.0% | |
AAGCTATTATGGGACAGGAG+GGG | - | chr8_4:50145320-50145339 | None:intergenic | 45.0% | |
TTCATCTACGGGTAGCACTT+GGG | + | chr8_4:50145435-50145454 | Msa1330870:three_prime_UTR | 45.0% | |
!!! | ATCTAAATAATTTATTTTAA+GGG | + | chr8_4:50145524-50145543 | Msa1330870:three_prime_UTR | 5.0% |
!! | TGGTTTCGAGGTATCGGAGA+AGG | - | chr8_4:50140019-50140038 | None:intergenic | 50.0% |
CAACGGTGGTTTCGAGGTAT+CGG | - | chr8_4:50140025-50140044 | None:intergenic | 50.0% | |
TCTTCAGCGACTACACCAAC+TGG | + | chr8_4:50140072-50140091 | Msa1330870:CDS | 50.0% | |
TACTCCGCGAGATTTCCAGT+TGG | - | chr8_4:50140090-50140109 | None:intergenic | 50.0% | |
AACTGGAAATCTCGCGGAGT+AGG | + | chr8_4:50140089-50140108 | Msa1330870:CDS | 50.0% | |
CCAACGTCTCGAACTGAACA+CGG | - | chr8_4:50140115-50140134 | None:intergenic | 50.0% | |
CTTGTTCTCGGCGAGAGTTA+GGG | - | chr8_4:50140153-50140172 | None:intergenic | 50.0% | |
TCTTGTTCTCGGCGAGAGTT+AGG | - | chr8_4:50140154-50140173 | None:intergenic | 50.0% | |
GACAGAGGAAATGGGAGCTA+AGG | - | chr8_4:50140184-50140203 | None:intergenic | 50.0% | |
! | AGCGTCGAGACAGAGGAAAT+GGG | - | chr8_4:50140192-50140211 | None:intergenic | 50.0% |
!! | AAGCGTCGAGACAGAGGAAA+TGG | - | chr8_4:50140193-50140212 | None:intergenic | 50.0% |
CCTAGGAATGATGTCATCGG+AGG | - | chr8_4:50140216-50140235 | None:intergenic | 50.0% | |
CCTCCGATGACATCATTCCT+AGG | + | chr8_4:50140213-50140232 | Msa1330870:CDS | 50.0% | |
CCATTGTTGATGCGGTTACG+AGG | - | chr8_4:50140248-50140267 | None:intergenic | 50.0% | |
CCTCGTAACCGCATCAACAA+TGG | + | chr8_4:50140245-50140264 | Msa1330870:CDS | 50.0% | |
CTCATGCAATCAGGACCGAT+GGG | - | chr8_4:50140290-50140309 | None:intergenic | 50.0% | |
ACTCATGCAATCAGGACCGA+TGG | - | chr8_4:50140291-50140310 | None:intergenic | 50.0% | |
!! | CAATCATGGGAAGGTGTTCG+AGG | + | chr8_4:50140317-50140336 | Msa1330870:CDS | 50.0% |
!! | ATGGGAAGGTGTTCGAGGTT+GGG | + | chr8_4:50140322-50140341 | Msa1330870:CDS | 50.0% |
GAGGTTGGGTTATGCCTGAA+AGG | + | chr8_4:50140336-50140355 | Msa1330870:CDS | 50.0% | |
!! | ACCTTCAAGAGAAGGGCGTT+GGG | - | chr8_4:50140470-50140489 | None:intergenic | 50.0% |
! | TACCTTCAAGAGAAGGGCGT+TGG | - | chr8_4:50140471-50140490 | None:intergenic | 50.0% |
GCCTGAAAAGCCGGTCAATT+TGG | - | chr8_4:50140670-50140689 | None:intergenic | 50.0% | |
!! | TTGACCGGCTTTTCAGGCTT+TGG | + | chr8_4:50140672-50140691 | Msa1330870:intron | 50.0% |
AACCTAGACCAGAGCAACGT+GGG | - | chr8_4:50140861-50140880 | None:intergenic | 50.0% | |
! | TCCGCTTGTCAAGTGTCGTT+TGG | + | chr8_4:50141598-50141617 | Msa1330870:CDS | 50.0% |
CCTTCTCTGCTAGTCAACTG+CGG | + | chr8_4:50142173-50142192 | Msa1330870:CDS | 50.0% | |
GTCAGTTGTTCAGTTCGTCC+AGG | + | chr8_4:50142311-50142330 | Msa1330870:CDS | 50.0% | |
TGAAATGGCCCCTCAAGATG+TGG | + | chr8_4:50142342-50142361 | Msa1330870:CDS | 50.0% | |
GAGGATCAACTGCAGTTGCT+AGG | + | chr8_4:50142721-50142740 | Msa1330870:CDS | 50.0% | |
GACTGATAAGGAAGCAGCCT+TGG | + | chr8_4:50142753-50142772 | Msa1330870:CDS | 50.0% | |
! | GGAAGCAGCCTTGGATGTTT+TGG | + | chr8_4:50142762-50142781 | Msa1330870:CDS | 50.0% |
GATAGGTAAGGCTCACCGTT+TGG | - | chr8_4:50142850-50142869 | None:intergenic | 50.0% | |
GGCCCTTGGGCACAAATATT+CGG | - | chr8_4:50142927-50142946 | None:intergenic | 50.0% | |
CCAAGCAGCCAATCAGAACT+CGG | - | chr8_4:50142948-50142967 | None:intergenic | 50.0% | |
ATTGGCTGCTTGGATGAGAC+TGG | + | chr8_4:50142955-50142974 | Msa1330870:CDS | 50.0% | |
!! | TGCTCTGGAGGTGATCTTGA+CGG | + | chr8_4:50144221-50144240 | Msa1330870:CDS | 50.0% |
GGACCATAAGGTGACACTAG+AGG | + | chr8_4:50144334-50144353 | Msa1330870:CDS | 50.0% | |
!! | GACACGTGTTGGTGCTACAT+AGG | - | chr8_4:50144397-50144416 | None:intergenic | 50.0% |
TGAGTGACATCGACACGTGT+TGG | - | chr8_4:50144408-50144427 | None:intergenic | 50.0% | |
TGCTATCTCCACCGCACATT+TGG | + | chr8_4:50144616-50144635 | Msa1330870:CDS | 50.0% | |
AGCATGAACCAAATGTGCGG+TGG | - | chr8_4:50144627-50144646 | None:intergenic | 50.0% | |
TGCTGACCGTGAACACGATA+AGG | + | chr8_4:50144643-50144662 | Msa1330870:CDS | 50.0% | |
CTTCTATGGTGCAACGACTG+AGG | + | chr8_4:50145012-50145031 | Msa1330870:CDS | 50.0% | |
!! | ACCGTGCGTCTTATTTGCAG+AGG | + | chr8_4:50145062-50145081 | Msa1330870:CDS | 50.0% |
CCCTCTGCAAATAAGACGCA+CGG | - | chr8_4:50145066-50145085 | None:intergenic | 50.0% | |
!! | CCGTGCGTCTTATTTGCAGA+GGG | + | chr8_4:50145063-50145082 | Msa1330870:CDS | 50.0% |
GTTCATCTACGGGTAGCACT+TGG | + | chr8_4:50145434-50145453 | Msa1330870:three_prime_UTR | 50.0% | |
!! | AGGGTCTTGTTAACGAGTGC+CGG | + | chr8_4:50145543-50145562 | Msa1330870:three_prime_UTR | 50.0% |
CACTCTCACTGCCCTAACCA+TGG | + | chr8_4:50139926-50139945 | Msa1330870:exon | 55.0% | |
ACGGTGGGTGTTTCGGATGA+AGG | - | chr8_4:50139957-50139976 | None:intergenic | 55.0% | |
!! | ATGTTGGTGACGCGAACGGT+GGG | - | chr8_4:50139972-50139991 | None:intergenic | 55.0% |
!! | TATGTTGGTGACGCGAACGG+TGG | - | chr8_4:50139973-50139992 | None:intergenic | 55.0% |
!! | GGGTATGTTGGTGACGCGAA+CGG | - | chr8_4:50139976-50139995 | None:intergenic | 55.0% |
GTATCGGAGAAGGTCGTTGG+CGG | - | chr8_4:50140009-50140028 | None:intergenic | 55.0% | |
!! | GAGGTATCGGAGAAGGTCGT+TGG | - | chr8_4:50140012-50140031 | None:intergenic | 55.0% |
CGATACCTCGAAACCACCGT+TGG | + | chr8_4:50140023-50140042 | Msa1330870:CDS | 55.0% | |
GATTTCGAGAGCGAAGACGG+AGG | - | chr8_4:50140054-50140073 | None:intergenic | 55.0% | |
CCGTGTTCAGTTCGAGACGT+TGG | + | chr8_4:50140112-50140131 | Msa1330870:CDS | 55.0% | |
TTACGAGGAAGAGCAGGCCT+AGG | - | chr8_4:50140233-50140252 | None:intergenic | 55.0% | |
ATGCGGTTACGAGGAAGAGC+AGG | - | chr8_4:50140239-50140258 | None:intergenic | 55.0% | |
!! | CATGGGAAGGTGTTCGAGGT+TGG | + | chr8_4:50140321-50140340 | Msa1330870:CDS | 55.0% |
ACCCAACGCCCTTCTCTTGA+AGG | + | chr8_4:50140466-50140485 | Msa1330870:CDS | 55.0% | |
AGGACTCACGTCGTTGAGGA+TGG | + | chr8_4:50140814-50140833 | Msa1330870:intron | 55.0% | |
GGACTCACGTCGTTGAGGAT+GGG | + | chr8_4:50140815-50140834 | Msa1330870:intron | 55.0% | |
ATTGGAGTCCCACGTTGCTC+TGG | + | chr8_4:50140850-50140869 | Msa1330870:intron | 55.0% | |
CAACCTAGACCAGAGCAACG+TGG | - | chr8_4:50140862-50140881 | None:intergenic | 55.0% | |
CTCAGCTGAGATATGGGCCA+AGG | + | chr8_4:50141306-50141325 | Msa1330870:intron | 55.0% | |
AGGTTTCAAGCTCGGGACCA+AGG | - | chr8_4:50141937-50141956 | None:intergenic | 55.0% | |
CCGCAGTTGACTAGCAGAGA+AGG | - | chr8_4:50142176-50142195 | None:intergenic | 55.0% | |
! | GGCGCTTTTGGCATTGCAAG+AGG | + | chr8_4:50142702-50142721 | Msa1330870:CDS | 55.0% |
CCAATCAGAACTCGGCCCTT+GGG | - | chr8_4:50142940-50142959 | None:intergenic | 55.0% | |
! | CCGAGTTCTGATTGGCTGCT+TGG | + | chr8_4:50142945-50142964 | Msa1330870:CDS | 55.0% |
! | CCAGAGCACTCGTTTGGATG+AGG | - | chr8_4:50144209-50144228 | None:intergenic | 55.0% |
CCTCATCCAAACGAGTGCTC+TGG | + | chr8_4:50144206-50144225 | Msa1330870:CDS | 55.0% | |
CATCCAAACGAGTGCTCTGG+AGG | + | chr8_4:50144209-50144228 | Msa1330870:CDS | 55.0% | |
! | TCACCTCCAGAGCACTCGTT+TGG | - | chr8_4:50144215-50144234 | None:intergenic | 55.0% |
!! | GCTCTGGAGGTGATCTTGAC+GGG | + | chr8_4:50144222-50144241 | Msa1330870:CDS | 55.0% |
! | CTCTGGAGGTGATCTTGACG+GGG | + | chr8_4:50144223-50144242 | Msa1330870:CDS | 55.0% |
GTTGGCTGAGCTGCATTCCA+TGG | + | chr8_4:50144688-50144707 | Msa1330870:CDS | 55.0% | |
GACGCGAACGGTGGGTGTTT+CGG | - | chr8_4:50139964-50139983 | None:intergenic | 60.0% | |
! | GGTGGCGGTATGGGGTATGT+TGG | - | chr8_4:50139988-50140007 | None:intergenic | 60.0% |
GTCCCACGTTGCTCTGGTCT+AGG | + | chr8_4:50140856-50140875 | Msa1330870:intron | 60.0% | |
! | CCCAAGGGCCGAGTTCTGAT+TGG | + | chr8_4:50142937-50142956 | Msa1330870:CDS | 60.0% |
GCCAATCAGAACTCGGCCCT+TGG | - | chr8_4:50142941-50142960 | None:intergenic | 60.0% | |
! | TCGTTGGCGGTGGCGGTATG+GGG | - | chr8_4:50139996-50140015 | None:intergenic | 65.0% |
! | GTCGTTGGCGGTGGCGGTAT+GGG | - | chr8_4:50139997-50140016 | None:intergenic | 65.0% |
GAGAAGGTCGTTGGCGGTGG+CGG | - | chr8_4:50140003-50140022 | None:intergenic | 65.0% | |
TCGGAGAAGGTCGTTGGCGG+TGG | - | chr8_4:50140006-50140025 | None:intergenic | 65.0% | |
AGCGGCCAACGGTGGTTTCG+AGG | - | chr8_4:50140031-50140050 | None:intergenic | 65.0% | |
GAAGACGGAGGAGCGGCCAA+CGG | - | chr8_4:50140042-50140061 | None:intergenic | 65.0% | |
CGAGAGCGAAGACGGAGGAG+CGG | - | chr8_4:50140049-50140068 | None:intergenic | 65.0% | |
!! | CGGAGGAAGCGTCGAGACAG+AGG | - | chr8_4:50140199-50140218 | None:intergenic | 65.0% |
! | GGTCGTTGGCGGTGGCGGTA+TGG | - | chr8_4:50139998-50140017 | None:intergenic | 70.0% |
GACGGAGGAGCGGCCAACGG+TGG | - | chr8_4:50140039-50140058 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_4 | gene | 50139882 | 50145591 | 50139882 | ID=Msa1330870;Name=Msa1330870 |
chr8_4 | mRNA | 50139882 | 50145591 | 50139882 | ID=Msa1330870-mRNA-1;Parent=Msa1330870;Name=Msa1330870-mRNA-1;_AED=0.07;_eAED=0.07;_QI=63|0.75|0.6|1|1|1|5|258|1071 |
chr8_4 | exon | 50139882 | 50140487 | 50139882 | ID=Msa1330870-mRNA-1:exon:14609;Parent=Msa1330870-mRNA-1 |
chr8_4 | exon | 50141311 | 50142976 | 50141311 | ID=Msa1330870-mRNA-1:exon:14610;Parent=Msa1330870-mRNA-1 |
chr8_4 | exon | 50143134 | 50143224 | 50143134 | ID=Msa1330870-mRNA-1:exon:14611;Parent=Msa1330870-mRNA-1 |
chr8_4 | exon | 50144205 | 50144355 | 50144205 | ID=Msa1330870-mRNA-1:exon:14612;Parent=Msa1330870-mRNA-1 |
chr8_4 | exon | 50144569 | 50145591 | 50144569 | ID=Msa1330870-mRNA-1:exon:14613;Parent=Msa1330870-mRNA-1 |
chr8_4 | five_prime_UTR | 50139882 | 50139944 | 50139882 | ID=Msa1330870-mRNA-1:five_prime_utr;Parent=Msa1330870-mRNA-1 |
chr8_4 | CDS | 50139945 | 50140487 | 50139945 | ID=Msa1330870-mRNA-1:cds;Parent=Msa1330870-mRNA-1 |
chr8_4 | CDS | 50141311 | 50142976 | 50141311 | ID=Msa1330870-mRNA-1:cds;Parent=Msa1330870-mRNA-1 |
chr8_4 | CDS | 50143134 | 50143224 | 50143134 | ID=Msa1330870-mRNA-1:cds;Parent=Msa1330870-mRNA-1 |
chr8_4 | CDS | 50144205 | 50144355 | 50144205 | ID=Msa1330870-mRNA-1:cds;Parent=Msa1330870-mRNA-1 |
chr8_4 | CDS | 50144569 | 50145333 | 50144569 | ID=Msa1330870-mRNA-1:cds;Parent=Msa1330870-mRNA-1 |
chr8_4 | three_prime_UTR | 50145334 | 50145591 | 50145334 | ID=Msa1330870-mRNA-1:three_prime_utr;Parent=Msa1330870-mRNA-1 |
Gene Sequence |
Protein sequence |