Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1298570 | sp|O82504|RDR2_ARATH | 59.857 | 1121 | 436 | 11 | 5 | 1119 | 6 | 1118 | 0.0 | 1372 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1298570 | A0A072US42 | 98.486 | 1123 | 17 | 0 | 1 | 1123 | 1 | 1123 | 0.0 | 2303 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1259180 | Msa1298570 | 0.978238 | 2.078369e-145 | -8.615850e-47 |
Msa1298570 | Msa1330870 | 0.945727 | 1.773433e-104 | -8.615850e-47 |
Msa1298570 | Msa1396610 | 0.961939 | 2.748847e-120 | -8.615850e-47 |
Msa1172020 | Msa1298570 | 0.941957 | 1.679460e-101 | -8.615850e-47 |
Msa1172080 | Msa1298570 | 0.878567 | 2.529967e-69 | -8.615850e-47 |
Msa1172160 | Msa1298570 | 0.958476 | 2.146345e-116 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1298570 | MtrunA17_Chr4g0059271 | 98.486 | 1123 | 17 | 0 | 1 | 1123 | 1 | 1123 | 0.0 | 2303 |
Msa1298570 | MtrunA17_Chr1g0161451 | 37.445 | 1127 | 652 | 17 | 10 | 1115 | 4 | 1098 | 0.0 | 744 |
Msa1298570 | MtrunA17_Chr1g0161491 | 37.150 | 1144 | 637 | 20 | 7 | 1119 | 17 | 1109 | 0.0 | 735 |
Msa1298570 | MtrunA17_Chr1g0161471 | 37.610 | 1138 | 643 | 17 | 7 | 1119 | 3 | 1098 | 0.0 | 734 |
Msa1298570 | MtrunA17_Chr1g0161521 | 37.772 | 1149 | 620 | 25 | 6 | 1115 | 2 | 1094 | 0.0 | 710 |
Msa1298570 | MtrunA17_Chr1g0161511 | 37.118 | 1145 | 642 | 22 | 6 | 1119 | 2 | 1099 | 0.0 | 690 |
Msa1298570 | MtrunA17_Chr3g0137841 | 36.603 | 948 | 530 | 22 | 217 | 1116 | 254 | 1178 | 1.11e-177 | 553 |
Msa1298570 | MtrunA17_Chr4g0059261 | 54.190 | 179 | 47 | 3 | 879 | 1056 | 1 | 145 | 1.85e-49 | 172 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1298570 | AT4G11130.1 | 59.857 | 1121 | 436 | 11 | 5 | 1119 | 6 | 1118 | 0.0 | 1372 |
Msa1298570 | AT1G14790.1 | 38.707 | 1129 | 627 | 20 | 10 | 1118 | 4 | 1087 | 0.0 | 744 |
Msa1298570 | AT3G49500.3 | 34.791 | 1006 | 586 | 21 | 152 | 1115 | 193 | 1170 | 4.92e-172 | 538 |
Msa1298570 | AT3G49500.4 | 34.791 | 1006 | 586 | 21 | 152 | 1115 | 193 | 1170 | 4.92e-172 | 538 |
Msa1298570 | AT3G49500.1 | 34.791 | 1006 | 586 | 21 | 152 | 1115 | 193 | 1170 | 4.92e-172 | 538 |
Msa1298570 | AT3G49500.2 | 34.791 | 1006 | 586 | 21 | 152 | 1115 | 193 | 1170 | 4.92e-172 | 538 |
Msa1298570 | AT3G49500.5 | 34.791 | 1006 | 586 | 21 | 152 | 1115 | 193 | 1170 | 4.92e-172 | 538 |
Msa1298570 | AT2G19930.2 | 26.723 | 595 | 318 | 22 | 452 | 960 | 269 | 831 | 8.40e-30 | 128 |
Msa1298570 | AT2G19930.3 | 26.723 | 595 | 318 | 22 | 452 | 960 | 263 | 825 | 8.93e-30 | 128 |
Msa1298570 | AT2G19930.1 | 26.723 | 595 | 318 | 22 | 452 | 960 | 269 | 831 | 1.06e-29 | 128 |
Msa1298570 | AT2G19910.2 | 23.772 | 631 | 361 | 22 | 426 | 969 | 247 | 844 | 2.42e-28 | 124 |
Msa1298570 | AT2G19910.1 | 23.594 | 640 | 360 | 22 | 426 | 969 | 247 | 853 | 8.64e-28 | 122 |
Msa1298570 | AT2G19920.4 | 24.121 | 597 | 343 | 21 | 447 | 963 | 267 | 833 | 4.43e-26 | 116 |
Msa1298570 | AT2G19920.3 | 24.121 | 597 | 343 | 21 | 447 | 963 | 267 | 833 | 5.09e-26 | 116 |
Msa1298570 | AT2G19920.1 | 24.121 | 597 | 343 | 21 | 447 | 963 | 268 | 834 | 5.22e-26 | 116 |
Msa1298570 | AT2G19920.2 | 24.121 | 597 | 343 | 21 | 447 | 963 | 281 | 847 | 5.36e-26 | 116 |
Find 280 sgRNAs with CRISPR-Local
Find 456 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGTAAATGTAAAAGCTATTA+TGG | 0.121735 | 8_3:+59415664 | None:intergenic |
AAAGGCAGAGACTTGATTTC+TGG | 0.185536 | 8_3:-59420637 | Msa1298570:CDS |
AATCTCAATCACTTTGAAAA+AGG | 0.199716 | 8_3:-59418940 | Msa1298570:CDS |
AAATCAAGTCTCTGCCTTTC+AGG | 0.202069 | 8_3:+59420641 | None:intergenic |
ACCCATTCTTGCTGCACATT+TGG | 0.246017 | 8_3:+59418701 | None:intergenic |
GGAAGCAGCCTTGGATGTTT+TGG | 0.247594 | 8_3:-59418229 | Msa1298570:CDS |
TTGCAAGTTTGAATCAATTA+TGG | 0.249399 | 8_3:+59416146 | None:intergenic |
ATGTCTCCATAACTTATATT+TGG | 0.262842 | 8_3:+59415607 | None:intergenic |
CTGGTGATCATATGCTTCTT+TGG | 0.269431 | 8_3:+59416089 | None:intergenic |
TATATATCCAAAGGTGTATT+AGG | 0.273653 | 8_3:-59416183 | Msa1298570:CDS |
TGCCTTGTATTTCCACAAAA+AGG | 0.275740 | 8_3:-59417796 | Msa1298570:CDS |
GTCGTTGGCGGTGGCGGTAT+GGG | 0.277922 | 8_3:+59420997 | None:intergenic |
TCTTGTTCTCGGCGAGAGTT+AGG | 0.279675 | 8_3:+59420840 | None:intergenic |
GAATGCTTTGCGTCACTAAA+TGG | 0.283123 | 8_3:-59418383 | Msa1298570:CDS |
AAATGTAGCTGCCAAGTTTA+AGG | 0.286106 | 8_3:-59419639 | Msa1298570:CDS |
ATCTCTTTGATGAGCTTCTA+TGG | 0.288965 | 8_3:-59415994 | Msa1298570:CDS |
TCAAACCTCTCCATGAAATC+TGG | 0.294279 | 8_3:+59416216 | None:intergenic |
AATTAAAGATGAGGCGCTTT+TGG | 0.304782 | 8_3:-59418301 | Msa1298570:CDS |
GGTCGTTGGCGGTGGCGGTA+TGG | 0.306523 | 8_3:+59420996 | None:intergenic |
TTCCTTCAGCATTTCAAATT+CGG | 0.314317 | 8_3:-59418500 | Msa1298570:CDS |
TTGATTCAAACTTGCAAGTA+AGG | 0.321264 | 8_3:-59416140 | Msa1298570:CDS |
TCTCTTGGTTTCAAAGATCT+TGG | 0.325340 | 8_3:+59416243 | None:intergenic |
TATTCTTCTCAGCTGAGATA+TGG | 0.333555 | 8_3:-59419692 | Msa1298570:intron |
TGCTATCTCCACCGCACATT+TGG | 0.333953 | 8_3:-59416376 | Msa1298570:CDS |
ATTCGGTATGGTGGATATAA+AGG | 0.339975 | 8_3:-59418483 | Msa1298570:CDS |
TCAGAGGTGATTTCAATATC+TGG | 0.341597 | 8_3:+59418618 | None:intergenic |
AAGAGAGTTTCCAGATTTCA+TGG | 0.342194 | 8_3:-59416226 | Msa1298570:CDS |
AAGCGTCGAGACAGAGGAAA+TGG | 0.352979 | 8_3:+59420801 | None:intergenic |
GTCATACTCATACTACAAAA+TGG | 0.353669 | 8_3:+59415583 | None:intergenic |
GCCAAGGATATATCAGAAAA+TGG | 0.356475 | 8_3:-59419669 | Msa1298570:CDS |
AGAGATAATGATTGATTAAG+AGG | 0.361305 | 8_3:+59415492 | None:intergenic |
GGCCCTTGGGCACAAATATT+CGG | 0.361333 | 8_3:+59418067 | None:intergenic |
CTTATTTGCAGAGGGATAAC+AGG | 0.361659 | 8_3:-59415921 | Msa1298570:CDS |
GTAAATGTAAAAGCTATTAT+GGG | 0.362309 | 8_3:+59415665 | None:intergenic |
AGGAAGAAGGCCTCGTATAA+TGG | 0.368988 | 8_3:-59416679 | Msa1298570:CDS |
TTAAACTTGGCAGCTACATT+TGG | 0.370092 | 8_3:+59419641 | None:intergenic |
GATCACCAGCTTGAAGTTGA+TGG | 0.370925 | 8_3:-59416075 | Msa1298570:CDS |
GGATTCCAAGTTACCTTATG+AGG | 0.373899 | 8_3:-59419372 | Msa1298570:CDS |
CTTCGAGATGGGATTCTAGT+TGG | 0.375811 | 8_3:-59418864 | Msa1298570:CDS |
GTGATTGAGATTGCATTGTT+TGG | 0.377189 | 8_3:+59418951 | None:intergenic |
TCCGCTTGTCAAGTGTCGTT+TGG | 0.377684 | 8_3:-59419393 | Msa1298570:CDS |
TAATTCCTAAGGTGGACAAC+AGG | 0.378356 | 8_3:+59418319 | None:intergenic |
AAGGAGAAGTTTCTTGTTCT+CGG | 0.378407 | 8_3:+59420829 | None:intergenic |
TACTGTTTCTCAGATGGTAT+TGG | 0.379094 | 8_3:-59418585 | Msa1298570:CDS |
TGTTTCTTTCAACTTTGGTT+TGG | 0.385184 | 8_3:+59421107 | None:intergenic |
CGATGGGAAAACCAGCATAA+AGG | 0.385658 | 8_3:+59420720 | None:intergenic |
TGATGAGTTGATTGACTTGT+TGG | 0.387549 | 8_3:-59419291 | Msa1298570:CDS |
GCCGCATGAATATCAACTTA+TGG | 0.388044 | 8_3:-59415812 | Msa1298570:CDS |
TAGTTTCCAAATATAAGTTA+TGG | 0.390100 | 8_3:-59415613 | Msa1298570:three_prime_UTR |
CCGAGTTCTGATTGGCTGCT+TGG | 0.391015 | 8_3:-59418046 | Msa1298570:CDS |
TTACCTCTAGTGTCACCTTA+TGG | 0.398055 | 8_3:+59416655 | None:intergenic |
GACGCGAACGGTGGGTGTTT+CGG | 0.398686 | 8_3:+59421030 | None:intergenic |
TTCTCAACTTTAAAGTCCAT+TGG | 0.399433 | 8_3:-59419557 | Msa1298570:CDS |
ATGAAGGAATCACCATGGTT+AGG | 0.399658 | 8_3:+59421053 | None:intergenic |
TTCCAAATGTGCAGCAAGAA+TGG | 0.406312 | 8_3:-59418703 | Msa1298570:CDS |
GGCCATTTCAAAAGTTTGCC+TGG | 0.408999 | 8_3:+59418662 | None:intergenic |
ACCCAACGCCCTTCTCTTGA+AGG | 0.410402 | 8_3:-59420525 | Msa1298570:intron |
ATACTTATCTCTGTGACTTA+TGG | 0.410941 | 8_3:+59416029 | None:intergenic |
TATGAACAAGAGAATTCAAT+TGG | 0.412886 | 8_3:+59419342 | None:intergenic |
ATGATAATTTCTTAAAAGAA+TGG | 0.414373 | 8_3:+59418442 | None:intergenic |
ATTCTTCTCAGCTGAGATAT+GGG | 0.418568 | 8_3:-59419691 | Msa1298570:intron |
CAGTGAAGAATTAGAAGAAA+AGG | 0.419054 | 8_3:-59417830 | Msa1298570:CDS |
ATTAGAAGAAAAGGGCTTGA+GGG | 0.420122 | 8_3:-59417821 | Msa1298570:CDS |
GGCCAAGAGTAGAAAATGTC+TGG | 0.424194 | 8_3:-59416328 | Msa1298570:CDS |
CTTCTTCCTGTGTAGTCCAT+TGG | 0.424934 | 8_3:+59416693 | None:intergenic |
ATGAAATCTGGAAACTCTCT+TGG | 0.426283 | 8_3:+59416228 | None:intergenic |
CGCCTCATCTTTAATTCCTA+AGG | 0.427060 | 8_3:+59418308 | None:intergenic |
CCAATCAGAACTCGGCCCTT+GGG | 0.428098 | 8_3:+59418054 | None:intergenic |
TGAAGGAATCACCATGGTTA+GGG | 0.430736 | 8_3:+59421054 | None:intergenic |
AACAATGGTGCCCTTTATGC+TGG | 0.433646 | 8_3:-59420731 | Msa1298570:CDS |
ATGGGAAGGTGTTCGAGGTT+GGG | 0.433950 | 8_3:-59420669 | Msa1298570:CDS |
ATGCTTTACCACATGATTTG+AGG | 0.435061 | 8_3:+59419037 | None:intergenic |
AACTGCGGTCAAATTCTGTT+TGG | 0.437464 | 8_3:-59418803 | Msa1298570:CDS |
TCACCTCCAGAGCACTCGTT+TGG | 0.439573 | 8_3:+59416780 | None:intergenic |
GAGACTGGTCTATTGAACTA+TGG | 0.441612 | 8_3:-59418021 | Msa1298570:CDS |
GATGGGAAAACCAGCATAAA+GGG | 0.442690 | 8_3:+59420721 | None:intergenic |
TCAAGGACTCTGATATCTCC+TGG | 0.445905 | 8_3:+59417862 | None:intergenic |
TGCTCTGGAGGTGATCTTGA+CGG | 0.447828 | 8_3:-59416771 | Msa1298570:CDS |
AAAGATCTTGGCATTTCTGC+AGG | 0.448689 | 8_3:+59416255 | None:intergenic |
TTACATGATCAATGATACTT+TGG | 0.449411 | 8_3:-59416400 | Msa1298570:CDS |
GATAGGTAAGGCTCACCGTT+TGG | 0.450059 | 8_3:+59418144 | None:intergenic |
TGATTTGAGGTTTCAAGCTC+GGG | 0.451659 | 8_3:+59419050 | None:intergenic |
ACTGAGGATGAAATGCTAAC+TGG | 0.452037 | 8_3:-59415964 | Msa1298570:CDS |
TCTCAACTTTAAAGTCCATT+GGG | 0.455669 | 8_3:-59419556 | Msa1298570:CDS |
TCGGAGAAGGTCGTTGGCGG+TGG | 0.457047 | 8_3:+59420988 | None:intergenic |
AAGGCAGAGACTTGATTTCT+GGG | 0.457890 | 8_3:-59420636 | Msa1298570:CDS |
ATATCCCTGTTGTCCACCTT+AGG | 0.460453 | 8_3:-59418324 | Msa1298570:CDS |
AAGTGTGTTTCTTTCAACTT+TGG | 0.460703 | 8_3:+59421102 | None:intergenic |
AGGAAAGATGTTGACTGATA+AGG | 0.461221 | 8_3:-59418250 | Msa1298570:CDS |
TTACATTTGTCGAAGAGGAT+TGG | 0.461457 | 8_3:-59418983 | Msa1298570:CDS |
GCTCTGGAGGTGATCTTGAC+GGG | 0.461676 | 8_3:-59416770 | Msa1298570:CDS |
GAGCCTTGAGCATCATTGAT+AGG | 0.462886 | 8_3:+59418127 | None:intergenic |
AGCTTTCGTTGTAATATTTG+TGG | 0.463226 | 8_3:+59415761 | None:intergenic |
GAGAAGGTCGTTGGCGGTGG+CGG | 0.463497 | 8_3:+59420991 | None:intergenic |
TTATATATTTCAGTTCTAAG+AGG | 0.464161 | 8_3:+59418903 | None:intergenic |
TCTTCAGCGACTACACCAAC+TGG | 0.465472 | 8_3:-59420919 | Msa1298570:CDS |
CATGGGAAGGTGTTCGAGGT+TGG | 0.467410 | 8_3:-59420670 | Msa1298570:CDS |
TGCTGACCGTGAACACGATA+AGG | 0.469968 | 8_3:-59416349 | Msa1298570:CDS |
ACCTTCAAGAGAAGGGCGTT+GGG | 0.470440 | 8_3:+59420524 | None:intergenic |
GCCTCGTATAATGGACCATA+AGG | 0.471634 | 8_3:-59416670 | Msa1298570:CDS |
CTGCCAAGTTTAAGGATGAT+AGG | 0.472401 | 8_3:-59419631 | Msa1298570:CDS |
TCTTGGCCTTATCGTGTTCA+CGG | 0.472605 | 8_3:+59416343 | None:intergenic |
AAGACCCTCATAAGGTAACT+TGG | 0.473229 | 8_3:+59419367 | None:intergenic |
AATTTGGAGATGAAAACTTA+AGG | 0.473286 | 8_3:-59417957 | Msa1298570:CDS |
AGTGAAGAATTAGAAGAAAA+GGG | 0.474853 | 8_3:-59417829 | Msa1298570:CDS |
ACTTGATTTCTGGGTCACTC+AGG | 0.476813 | 8_3:-59420627 | Msa1298570:CDS |
CTTGTTCTCGGCGAGAGTTA+GGG | 0.479196 | 8_3:+59420841 | None:intergenic |
GATAGCACACGTATTATAGT+AGG | 0.479258 | 8_3:-59417919 | Msa1298570:CDS |
TGAAGCACACTCATGCAATC+AGG | 0.481424 | 8_3:+59420695 | None:intergenic |
TCGTTGGCGGTGGCGGTATG+GGG | 0.481457 | 8_3:+59420998 | None:intergenic |
GAATTTGAAGGATCTAAGTC+TGG | 0.481716 | 8_3:-59419453 | Msa1298570:CDS |
TACCTTCAAGAGAAGGGCGT+TGG | 0.481883 | 8_3:+59420523 | None:intergenic |
CTCAGTAAAGGATCTTCAGC+TGG | 0.482094 | 8_3:-59415866 | Msa1298570:CDS |
TATTGAATATTCTTCGAGAT+GGG | 0.484103 | 8_3:-59418875 | Msa1298570:CDS |
ATGATTTGAGGTTTCAAGCT+CGG | 0.484910 | 8_3:+59419049 | None:intergenic |
GACTGATAAGGAAGCAGCCT+TGG | 0.485593 | 8_3:-59418238 | Msa1298570:CDS |
TCCAAATGTGCAGCAAGAAT+GGG | 0.486535 | 8_3:-59418702 | Msa1298570:CDS |
GTTCATCTACGGGTAGCACT+TGG | 0.486565 | 8_3:-59415558 | Msa1298570:three_prime_UTR |
AATCTTTGACGGGGTAATCA+AGG | 0.487076 | 8_3:+59419085 | None:intergenic |
TTAAGCTTTCCATGGATTGT+CGG | 0.487901 | 8_3:-59415730 | Msa1298570:CDS |
AGCGGCCAACGGTGGTTTCG+AGG | 0.488002 | 8_3:+59420963 | None:intergenic |
CAGTTATGCGGACAAATACT+TGG | 0.489042 | 8_3:+59417998 | None:intergenic |
GATTGACTTGTTGGTAAGCT+TGG | 0.489425 | 8_3:-59419282 | Msa1298570:CDS |
TACATGATCAATGATACTTT+GGG | 0.492368 | 8_3:-59416399 | Msa1298570:CDS |
AGCAGATATCAGAGAATGGA+TGG | 0.494048 | 8_3:-59418751 | Msa1298570:CDS |
CCTCATCCAAACGAGTGCTC+TGG | 0.495371 | 8_3:-59416786 | Msa1298570:CDS |
ACGGTGGGTGTTTCGGATGA+AGG | 0.497872 | 8_3:+59421037 | None:intergenic |
GAGTATGACATGTTCATCTA+CGG | 0.498802 | 8_3:-59415569 | Msa1298570:three_prime_UTR |
GGTGGCGGTATGGGGTATGT+TGG | 0.499318 | 8_3:+59421006 | None:intergenic |
GAGGTATCGGAGAAGGTCGT+TGG | 0.500329 | 8_3:+59420982 | None:intergenic |
GAATTAAATCCACATCTTGA+GGG | 0.500437 | 8_3:+59418640 | None:intergenic |
TTAAAATGTTTAAAGAGTGC+CGG | 0.502743 | 8_3:+59415430 | None:intergenic |
ATTGGCTGCTTGGATGAGAC+TGG | 0.502836 | 8_3:-59418036 | Msa1298570:CDS |
ACAAGCGGAACTGTTTCAGT+TGG | 0.503145 | 8_3:+59419407 | None:intergenic |
CACACGTATTATAGTAGGTA+AGG | 0.504821 | 8_3:-59417914 | Msa1298570:CDS |
TGTAAAAGCTATTATGGGAC+AGG | 0.505147 | 8_3:+59415670 | None:intergenic |
TCGAATTCTAATCTCAGTAA+AGG | 0.506278 | 8_3:-59415878 | Msa1298570:CDS |
GCATGAGTGTGCTTCAATCA+TGG | 0.506625 | 8_3:-59420688 | Msa1298570:CDS |
GACAGAGGAAATGGGAGCTA+AGG | 0.506663 | 8_3:+59420810 | None:intergenic |
GTTGTAATATTTGTGGTGAT+AGG | 0.508964 | 8_3:+59415768 | None:intergenic |
GAAGATTTCGAGAGCGAAGA+CGG | 0.509538 | 8_3:+59420937 | None:intergenic |
ACACCTTTGGATATATACAT+AGG | 0.510540 | 8_3:+59416189 | None:intergenic |
AGGATATATCAGAAAATGGC+GGG | 0.511059 | 8_3:-59419665 | Msa1298570:CDS |
GAGATAATGATTGATTAAGA+GGG | 0.511789 | 8_3:+59415493 | None:intergenic |
CCGTCAAAGATTTATTGCCT+TGG | 0.512172 | 8_3:-59419074 | Msa1298570:CDS |
TTCAGCTGGAAGCTAAAGAA+TGG | 0.512543 | 8_3:-59415852 | Msa1298570:CDS |
TTCAAATTCTCTCTGTAGAG+CGG | 0.513592 | 8_3:+59419467 | None:intergenic |
AGGGTCTTGTTAACGAGTGC+CGG | 0.514581 | 8_3:-59415449 | Msa1298570:three_prime_UTR |
CAAGGCAATAAATCTTTGAC+GGG | 0.515130 | 8_3:+59419075 | None:intergenic |
GTTGGCTGAGCTGCATTCCA+TGG | 0.515719 | 8_3:-59416304 | Msa1298570:CDS |
GGAATTAAATCCACATCTTG+AGG | 0.517345 | 8_3:+59418639 | None:intergenic |
AAGCTTGGATGCAGAAACTA+AGG | 0.517404 | 8_3:-59419267 | Msa1298570:CDS |
GATGGGTATTGTTCTGATGA+AGG | 0.517540 | 8_3:-59420554 | Msa1298570:CDS |
CAGGAGATACGGAGATATGA+AGG | 0.520429 | 8_3:-59415902 | Msa1298570:CDS |
GCATTTCAAATTCGGTATGG+TGG | 0.520713 | 8_3:-59418492 | Msa1298570:CDS |
AAAATGTCACCGACAATCCA+TGG | 0.520826 | 8_3:+59415721 | None:intergenic |
CCAAGGCAATAAATCTTTGA+CGG | 0.522349 | 8_3:+59419074 | None:intergenic |
AGCGTCGAGACAGAGGAAAT+GGG | 0.523626 | 8_3:+59420802 | None:intergenic |
CAACGGTGGTTTCGAGGTAT+CGG | 0.524158 | 8_3:+59420969 | None:intergenic |
CCAGAGCACTCGTTTGGATG+AGG | 0.526144 | 8_3:+59416786 | None:intergenic |
AATTGGAAAAGACCCTCATA+AGG | 0.526321 | 8_3:+59419359 | None:intergenic |
TATGTTGGTGACGCGAACGG+TGG | 0.526738 | 8_3:+59421021 | None:intergenic |
TCAAATTCTCTCTGTAGAGC+GGG | 0.527074 | 8_3:+59419468 | None:intergenic |
CCTCCGATGACATCATTCCT+AGG | 0.527766 | 8_3:-59420778 | Msa1298570:CDS |
TAGAACTGAAATATATAAGC+GGG | 0.527945 | 8_3:-59418898 | Msa1298570:CDS |
ATATCTCCTGGGTGAAGACA+AGG | 0.528826 | 8_3:+59417874 | None:intergenic |
CAGAGGGATAACAGGAGATA+CGG | 0.530199 | 8_3:-59415913 | Msa1298570:CDS |
GATATTGAAATCACCTCTGA+TGG | 0.531578 | 8_3:-59418615 | Msa1298570:CDS |
TAAACTTTCCAAAACATCCA+AGG | 0.533340 | 8_3:+59418221 | None:intergenic |
GTATTGAATATTCTTCGAGA+TGG | 0.533472 | 8_3:-59418876 | Msa1298570:CDS |
GTCAGTTGTTCAGTTCGTCC+AGG | 0.534486 | 8_3:-59418680 | Msa1298570:CDS |
CAATCATGGGAAGGTGTTCG+AGG | 0.534880 | 8_3:-59420674 | Msa1298570:CDS |
AATAATGTACCTTCAAGAGA+AGG | 0.536479 | 8_3:+59420516 | None:intergenic |
AAGGATCTAAGTCTGGAAGA+TGG | 0.537009 | 8_3:-59419446 | Msa1298570:CDS |
TCAGCATTTCAAATTCGGTA+TGG | 0.541932 | 8_3:-59418495 | Msa1298570:CDS |
TTACGAGGAAGAGCAGGCCT+AGG | 0.542828 | 8_3:+59420761 | None:intergenic |
GATTCCAAGTTACCTTATGA+GGG | 0.542917 | 8_3:-59419371 | Msa1298570:CDS |
GAGGATCAACTGCAGTTGCT+AGG | 0.543687 | 8_3:-59418270 | Msa1298570:CDS |
AATTAGAAGAAAAGGGCTTG+AGG | 0.544606 | 8_3:-59417822 | Msa1298570:CDS |
ATGCGGTTACGAGGAAGAGC+AGG | 0.546517 | 8_3:+59420755 | None:intergenic |
ATGCCGAATATTTGTGCCCA+AGG | 0.547697 | 8_3:-59418070 | Msa1298570:CDS |
ATACCTATCATCCTTAAACT+TGG | 0.548449 | 8_3:+59419628 | None:intergenic |
CGGAGGAAGCGTCGAGACAG+AGG | 0.549019 | 8_3:+59420795 | None:intergenic |
TTCATCTACGGGTAGCACTT+GGG | 0.550826 | 8_3:-59415557 | Msa1298570:three_prime_UTR |
GCTCTACAGAGAGAATTTGA+AGG | 0.554058 | 8_3:-59419465 | Msa1298570:CDS |
AGCTCAAACTGAAAATCCAA+TGG | 0.558132 | 8_3:-59416709 | Msa1298570:CDS |
CTTGATTTCTGGGTCACTCA+GGG | 0.560046 | 8_3:-59420626 | Msa1298570:CDS |
CTTTGCAAAATCAACTGCCA+TGG | 0.561690 | 8_3:+59416287 | None:intergenic |
ATCTCTCGATTGAGAAAGCA+CGG | 0.562182 | 8_3:+59418348 | None:intergenic |
CCCTCTGCAAATAAGACGCA+CGG | 0.562446 | 8_3:+59415929 | None:intergenic |
AGTATGACATGTTCATCTAC+GGG | 0.563607 | 8_3:-59415568 | Msa1298570:three_prime_UTR |
TTGAGCATCATTGATAGGTA+AGG | 0.565773 | 8_3:+59418132 | None:intergenic |
GAGGTTGGGTTATGCCTGAA+AGG | 0.566352 | 8_3:-59420655 | Msa1298570:CDS |
CCAAGCAGCCAATCAGAACT+CGG | 0.567198 | 8_3:+59418046 | None:intergenic |
GACGGAGGAGCGGCCAACGG+TGG | 0.569208 | 8_3:+59420955 | None:intergenic |
GAAGACGGAGGAGCGGCCAA+CGG | 0.569296 | 8_3:+59420952 | None:intergenic |
CATCCAAACGAGTGCTCTGG+AGG | 0.571761 | 8_3:-59416783 | Msa1298570:CDS |
CTCAGCTGAGATATGGGCCA+AGG | 0.573402 | 8_3:-59419685 | Msa1298570:intron |
ACTCATGCAATCAGGACCGA+TGG | 0.575204 | 8_3:+59420703 | None:intergenic |
TGAAATGGCCCCTCAAGATG+TGG | 0.577783 | 8_3:-59418649 | Msa1298570:CDS |
GGGTATGTTGGTGACGCGAA+CGG | 0.578509 | 8_3:+59421018 | None:intergenic |
TTCTAGTCAAGATGCTGCAT+AGG | 0.579278 | 8_3:-59418176 | Msa1298570:CDS |
CAATGGACTACACAGGAAGA+AGG | 0.581873 | 8_3:-59416692 | Msa1298570:CDS |
CATGAGTGTGCTTCAATCAT+GGG | 0.584065 | 8_3:-59420687 | Msa1298570:CDS |
AGGTTTCAAGCTCGGGACCA+AGG | 0.584833 | 8_3:+59419057 | None:intergenic |
CAAAACCATCAACTTCAAGC+TGG | 0.585160 | 8_3:+59416070 | None:intergenic |
GAGTAGAAAATGTCTGGAGT+TGG | 0.587027 | 8_3:-59416322 | Msa1298570:CDS |
CCGCAGTTGACTAGCAGAGA+AGG | 0.587586 | 8_3:+59418818 | None:intergenic |
AACTGGAAATCTCGCGGAGT+AGG | 0.587687 | 8_3:-59420902 | Msa1298570:CDS |
CCTCGTAACCGCATCAACAA+TGG | 0.589683 | 8_3:-59420746 | Msa1298570:CDS |
AAACCTATGTATATATCCAA+AGG | 0.590044 | 8_3:-59416192 | Msa1298570:CDS |
CTCTGGAGGTGATCTTGACG+GGG | 0.590343 | 8_3:-59416769 | Msa1298570:CDS |
AAGCAGCAGATATCAGAGAA+TGG | 0.591150 | 8_3:-59418755 | Msa1298570:CDS |
GTATCGGAGAAGGTCGTTGG+CGG | 0.591381 | 8_3:+59420985 | None:intergenic |
CGAGAGCGAAGACGGAGGAG+CGG | 0.591558 | 8_3:+59420945 | None:intergenic |
ATGTTGGTGACGCGAACGGT+GGG | 0.593609 | 8_3:+59421022 | None:intergenic |
CAAGGACTCTGATATCTCCT+GGG | 0.594584 | 8_3:+59417863 | None:intergenic |
ATAGACTACTGTTTCTCAGA+TGG | 0.597479 | 8_3:-59418591 | Msa1298570:CDS |
CTTCACTGTAGACAGCATCA+AGG | 0.597815 | 8_3:+59417845 | None:intergenic |
CTTGCAAGTAAGGTTTGACA+TGG | 0.598486 | 8_3:-59416130 | Msa1298570:CDS |
AGTTTCCAGATTTCATGGAG+AGG | 0.599984 | 8_3:-59416221 | Msa1298570:CDS |
TTACCTATCAATGATGCTCA+AGG | 0.600272 | 8_3:-59418130 | Msa1298570:CDS |
TGGTTTCGAGGTATCGGAGA+AGG | 0.600522 | 8_3:+59420975 | None:intergenic |
CTCATCTTTAATTCCTAAGG+TGG | 0.601222 | 8_3:+59418311 | None:intergenic |
ATAATGTACCTTCAAGAGAA+GGG | 0.602102 | 8_3:+59420517 | None:intergenic |
TACCGAATTTGAAATGCTGA+AGG | 0.602636 | 8_3:+59418498 | None:intergenic |
GAGGATTACATTTGTCGAAG+AGG | 0.605467 | 8_3:-59418988 | Msa1298570:CDS |
TCCAAACGACACTTGACAAG+CGG | 0.605528 | 8_3:+59419392 | None:intergenic |
AAAGGGCACCATTGTTGATG+CGG | 0.606832 | 8_3:+59420738 | None:intergenic |
ACCGTGCGTCTTATTTGCAG+AGG | 0.612147 | 8_3:-59415930 | Msa1298570:CDS |
CTTATCTCTGTGACTTATGG+CGG | 0.614852 | 8_3:+59416032 | None:intergenic |
AATTCCTAAGGTGGACAACA+GGG | 0.615361 | 8_3:+59418320 | None:intergenic |
CCGTGTTCAGTTCGAGACGT+TGG | 0.616185 | 8_3:-59420879 | Msa1298570:CDS |
AAATGAGGTTGAGTGCCCAA+TGG | 0.616736 | 8_3:+59419541 | None:intergenic |
AAAGCTATTATGGGACAGGA+GGG | 0.619131 | 8_3:+59415674 | None:intergenic |
ACAGTAGTCTATACCATCAG+AGG | 0.619390 | 8_3:+59418602 | None:intergenic |
CACTCTCACTGCCCTAACCA+TGG | 0.619917 | 8_3:-59421065 | Msa1298570:exon |
CATATGCTTCAGACTTCATG+AGG | 0.619958 | 8_3:-59419007 | Msa1298570:CDS |
AAAAGCTATTATGGGACAGG+AGG | 0.621171 | 8_3:+59415673 | None:intergenic |
ATCAACTTATGGCATCTGCA+TGG | 0.623828 | 8_3:-59415801 | Msa1298570:CDS |
CCATTGTTGATGCGGTTACG+AGG | 0.625862 | 8_3:+59420746 | None:intergenic |
TGCCGAATATTTGTGCCCAA+GGG | 0.626409 | 8_3:-59418069 | Msa1298570:CDS |
GAAAACTTAAGGAACGTGGA+TGG | 0.627342 | 8_3:-59417946 | Msa1298570:CDS |
TTAGAACTGAAATATATAAG+CGG | 0.627448 | 8_3:-59418899 | Msa1298570:CDS |
AGGCCTAGGAATGATGTCAT+CGG | 0.630434 | 8_3:+59420775 | None:intergenic |
CCGTGCGTCTTATTTGCAGA+GGG | 0.630926 | 8_3:-59415929 | Msa1298570:CDS |
CCAACGTCTCGAACTGAACA+CGG | 0.635423 | 8_3:+59420879 | None:intergenic |
CTCATGCAATCAGGACCGAT+GGG | 0.635720 | 8_3:+59420704 | None:intergenic |
CACCTTAGGAATTAAAGATG+AGG | 0.636864 | 8_3:-59418310 | Msa1298570:CDS |
GATTTCGAGAGCGAAGACGG+AGG | 0.642616 | 8_3:+59420940 | None:intergenic |
GCAGATATCAGAGAATGGAT+GGG | 0.645198 | 8_3:-59418750 | Msa1298570:CDS |
ATTTGTGGTGATAGGTCACA+TGG | 0.648197 | 8_3:+59415776 | None:intergenic |
CTTCTATGGTGCAACGACTG+AGG | 0.648233 | 8_3:-59415980 | Msa1298570:CDS |
AGTTTGAATCAATTATGGCA+CGG | 0.648573 | 8_3:+59416151 | None:intergenic |
AGCATGAACCAAATGTGCGG+TGG | 0.651334 | 8_3:+59416368 | None:intergenic |
GAAAATCCAATGGACTACAC+AGG | 0.652832 | 8_3:-59416699 | Msa1298570:CDS |
ATGAGCCTCTAAAATATGTG+AGG | 0.655312 | 8_3:-59419202 | Msa1298570:CDS |
AATTAAATCCACATCTTGAG+GGG | 0.658323 | 8_3:+59418641 | None:intergenic |
TACTCCGCGAGATTTCCAGT+TGG | 0.659482 | 8_3:+59420904 | None:intergenic |
AGATGAAAACTTAAGGAACG+TGG | 0.661382 | 8_3:-59417950 | Msa1298570:CDS |
GGATATATCAGAAAATGGCG+GGG | 0.662600 | 8_3:-59419664 | Msa1298570:CDS |
ACGTATTATAGTAGGTAAGG+TGG | 0.663508 | 8_3:-59417911 | Msa1298570:CDS |
GCCATAAGTTGATATTCATG+CGG | 0.666800 | 8_3:+59415811 | None:intergenic |
GCTTGAAACCTCAAATCATG+TGG | 0.667801 | 8_3:-59419045 | Msa1298570:CDS |
AAGGATATATCAGAAAATGG+CGG | 0.669867 | 8_3:-59419666 | Msa1298570:CDS |
AGTATTTGTCCGCATAACTG+TGG | 0.671573 | 8_3:-59417995 | Msa1298570:CDS |
TATCTCCTGGGTGAAGACAA+GGG | 0.677342 | 8_3:+59417875 | None:intergenic |
GGACCATAAGGTGACACTAG+AGG | 0.679180 | 8_3:-59416658 | Msa1298570:intron |
GTCAGCATGAACCAAATGTG+CGG | 0.682533 | 8_3:+59416365 | None:intergenic |
TACACCAACTGGAAATCTCG+CGG | 0.683114 | 8_3:-59420908 | Msa1298570:CDS |
CGATACCTCGAAACCACCGT+TGG | 0.683116 | 8_3:-59420968 | Msa1298570:CDS |
ACCTTATGGTCCATTATACG+AGG | 0.683594 | 8_3:+59416669 | None:intergenic |
CTTTAAAGTTGAGAAGTCAG+TGG | 0.685540 | 8_3:+59419565 | None:intergenic |
CCTAGGAATGATGTCATCGG+AGG | 0.687166 | 8_3:+59420778 | None:intergenic |
TTCGGATGAAGGAATCACCA+TGG | 0.700240 | 8_3:+59421048 | None:intergenic |
CCTTCTCTGCTAGTCAACTG+CGG | 0.703161 | 8_3:-59418818 | Msa1298570:CDS |
AAGCTATTATGGGACAGGAG+GGG | 0.709108 | 8_3:+59415675 | None:intergenic |
AGTGTGCTTCAATCATGGGA+AGG | 0.715224 | 8_3:-59420683 | Msa1298570:CDS |
CTGCACATTTGGAAACACTG+CGG | 0.755401 | 8_3:+59418712 | None:intergenic |
AAGGCAATAAATCTTTGACG+GGG | 0.771887 | 8_3:+59419076 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATAATAGAAAAAGAAAA+AGG | + | chr8_3:59418943-59418962 | None:intergenic | 10.0% |
!!! | CATCTAAATAATTTATTTTA+AGG | - | chr8_3:59421063-59421082 | Msa1298570:exon | 10.0% |
!!! | AATTCCTTTTGAAAATATTT+TGG | - | chr8_3:59415950-59415969 | Msa1298570:CDS | 15.0% |
!! | TATAAGTTGTTTATACAAAT+TGG | - | chr8_3:59416663-59416682 | Msa1298570:CDS | 15.0% |
!! | ATAAGTTGTTTATACAAATT+GGG | - | chr8_3:59416664-59416683 | Msa1298570:CDS | 15.0% |
!! | ATGATAATTTCTTAAAAGAA+TGG | + | chr8_3:59418093-59418112 | None:intergenic | 15.0% |
!!! | TCATAAAAGTTTAATTTGTT+AGG | + | chr8_3:59419445-59419464 | None:intergenic | 15.0% |
!! | TTCAGATTTATTTAGAAAAA+CGG | + | chr8_3:59419536-59419555 | None:intergenic | 15.0% |
!! | ACATTATTTGTTTATGTGTT+AGG | - | chr8_3:59416031-59416050 | Msa1298570:CDS | 20.0% |
!! | CATTATTTGTTTATGTGTTA+GGG | - | chr8_3:59416032-59416051 | Msa1298570:CDS | 20.0% |
!! | ATTTGATACCATGTTAAATA+TGG | + | chr8_3:59416301-59416320 | None:intergenic | 20.0% |
!! | TTTGATGTATAAATGTGTTT+GGG | - | chr8_3:59416423-59416442 | Msa1298570:CDS | 20.0% |
!! | AAATCACTCAAATTGAAATA+AGG | + | chr8_3:59416719-59416738 | None:intergenic | 20.0% |
!!! | ATTTCAATTTGAGTGATTTT+TGG | - | chr8_3:59416720-59416739 | Msa1298570:CDS | 20.0% |
!!! | TTTCAATTTGAGTGATTTTT+GGG | - | chr8_3:59416721-59416740 | Msa1298570:CDS | 20.0% |
!! | TAAATCAATAACAGAATGAA+AGG | + | chr8_3:59416773-59416792 | None:intergenic | 20.0% |
!! | GAAGAATAACAAAACATAAA+GGG | + | chr8_3:59416828-59416847 | None:intergenic | 20.0% |
!! | AGAAGAATAACAAAACATAA+AGG | + | chr8_3:59416829-59416848 | None:intergenic | 20.0% |
!!! | TTATATATTTCAGTTCTAAG+AGG | + | chr8_3:59417632-59417651 | None:intergenic | 20.0% |
!! | TTAGAACTGAAATATATAAG+CGG | - | chr8_3:59417633-59417652 | Msa1298570:intron | 20.0% |
!!! | TTCTTTTTCTCTCTTTTTAT+TGG | + | chr8_3:59418969-59418988 | None:intergenic | 20.0% |
!! | AATAAAAAGAGAGAAAAAGA+AGG | - | chr8_3:59418968-59418987 | Msa1298570:CDS | 20.0% |
!!! | TAAAAGTTTAATTTGTTAGG+TGG | + | chr8_3:59419442-59419461 | None:intergenic | 20.0% |
!!! | AATTAAACTTTTATGAGTGT+TGG | - | chr8_3:59419449-59419468 | Msa1298570:CDS | 20.0% |
!! | TCAGATTTATTTAGAAAAAC+GGG | + | chr8_3:59419535-59419554 | None:intergenic | 20.0% |
!! | AGTGTTTCTTTAAACAAAAT+TGG | - | chr8_3:59420043-59420062 | Msa1298570:intron | 20.0% |
!! | TCATGTAATCAACAAAAAAT+TGG | + | chr8_3:59420120-59420139 | None:intergenic | 20.0% |
!! | GTAAATGTAAAAGCTATTAT+GGG | + | chr8_3:59420870-59420889 | None:intergenic | 20.0% |
!! | TGTAAATGTAAAAGCTATTA+TGG | + | chr8_3:59420871-59420890 | None:intergenic | 20.0% |
!! | TAGTTTCCAAATATAAGTTA+TGG | - | chr8_3:59420919-59420938 | Msa1298570:CDS | 20.0% |
!! | CACTCCAAAATATTTTCAAA+AGG | + | chr8_3:59415957-59415976 | None:intergenic | 25.0% |
!!! | AAAATATTTTGGAGTGTGAT+GGG | - | chr8_3:59415961-59415980 | Msa1298570:CDS | 25.0% |
! | ACTTATTGTTGAAGTTGTAT+TGG | - | chr8_3:59416181-59416200 | Msa1298570:CDS | 25.0% |
! | ATCTAAGTCCATATTTAACA+TGG | - | chr8_3:59416290-59416309 | Msa1298570:CDS | 25.0% |
! | TTTAACATGGTATCAAATCT+AGG | - | chr8_3:59416303-59416322 | Msa1298570:CDS | 25.0% |
! | TAGGTTAAGAATTGCAATAT+GGG | - | chr8_3:59416322-59416341 | Msa1298570:CDS | 25.0% |
! | GTTTGATGTATAAATGTGTT+TGG | - | chr8_3:59416422-59416441 | Msa1298570:CDS | 25.0% |
! | CATAATTTCCCAAAAAAATG+AGG | + | chr8_3:59417009-59417028 | None:intergenic | 25.0% |
!!! | CTCATTTTTTTGGGAAATTA+TGG | - | chr8_3:59417007-59417026 | Msa1298570:intron | 25.0% |
! | TATGAACAAGAGAATTCAAT+TGG | + | chr8_3:59417193-59417212 | None:intergenic | 25.0% |
!! | AATCTCAATCACTTTGAAAA+AGG | - | chr8_3:59417592-59417611 | Msa1298570:intron | 25.0% |
!! | ATCTCAATCACTTTGAAAAA+GGG | - | chr8_3:59417593-59417612 | Msa1298570:intron | 25.0% |
! | TAGAACTGAAATATATAAGC+GGG | - | chr8_3:59417634-59417653 | Msa1298570:intron | 25.0% |
! | TATTGAATATTCTTCGAGAT+GGG | - | chr8_3:59417657-59417676 | Msa1298570:intron | 25.0% |
!!! | GATGTTTTGGAAAGTTTAAA+TGG | - | chr8_3:59418316-59418335 | Msa1298570:CDS | 25.0% |
! | GCAAAAACTAAGGAAAAATT+TGG | - | chr8_3:59418559-59418578 | Msa1298570:CDS | 25.0% |
! | AATTTGGAGATGAAAACTTA+AGG | - | chr8_3:59418575-59418594 | Msa1298570:CDS | 25.0% |
! | AGTGAAGAATTAGAAGAAAA+GGG | - | chr8_3:59418703-59418722 | Msa1298570:CDS | 25.0% |
! | AAACCATTATATACATACCT+AGG | + | chr8_3:59418763-59418782 | None:intergenic | 25.0% |
! | TTATTACAATCAAATGCAGT+TGG | + | chr8_3:59418792-59418811 | None:intergenic | 25.0% |
! | AAAAAGAAAAAGGAAGATAG+AGG | + | chr8_3:59418933-59418952 | None:intergenic | 25.0% |
! | TCACAAAAGTTGTTATCAAA+TGG | - | chr8_3:59418994-59419013 | Msa1298570:CDS | 25.0% |
! | TAAGAAATTGAGTTAAGTAG+AGG | + | chr8_3:59419193-59419212 | None:intergenic | 25.0% |
! | GTAAACAACATGTAACATAT+TGG | + | chr8_3:59419289-59419308 | None:intergenic | 25.0% |
! | CATATACCTTGTTAGATATT+AGG | - | chr8_3:59419413-59419432 | Msa1298570:CDS | 25.0% |
! | CAGATTTATTTAGAAAAACG+GGG | + | chr8_3:59419534-59419553 | None:intergenic | 25.0% |
! | ATTCTAACATAAAGTAGACT+AGG | - | chr8_3:59419577-59419596 | Msa1298570:CDS | 25.0% |
!!! | GGATTTATTTTTCATAAGCT+GGG | - | chr8_3:59419784-59419803 | Msa1298570:intron | 25.0% |
! | TTACATGATCAATGATACTT+TGG | - | chr8_3:59420132-59420151 | Msa1298570:intron | 25.0% |
! | TACATGATCAATGATACTTT+GGG | - | chr8_3:59420133-59420152 | Msa1298570:intron | 25.0% |
! | AAACCTATGTATATATCCAA+AGG | - | chr8_3:59420340-59420359 | Msa1298570:intron | 25.0% |
!! | TATATATCCAAAGGTGTATT+AGG | - | chr8_3:59420349-59420368 | Msa1298570:intron | 25.0% |
! | TTGCAAGTTTGAATCAATTA+TGG | + | chr8_3:59420389-59420408 | None:intergenic | 25.0% |
!! | AACTAAGCTACAATCTTTTT+AGG | + | chr8_3:59420904-59420923 | None:intergenic | 25.0% |
! | ATGTCTCCATAACTTATATT+TGG | + | chr8_3:59420928-59420947 | None:intergenic | 25.0% |
! | GAGATAATGATTGATTAAGA+GGG | + | chr8_3:59421042-59421061 | None:intergenic | 25.0% |
! | AGAGATAATGATTGATTAAG+AGG | + | chr8_3:59421043-59421062 | None:intergenic | 25.0% |
!! | TTAAAATGTTTAAAGAGTGC+CGG | + | chr8_3:59421105-59421124 | None:intergenic | 25.0% |
TGTTTCTTTCAACTTTGGTT+TGG | + | chr8_3:59415428-59415447 | None:intergenic | 30.0% | |
AAGTGTGTTTCTTTCAACTT+TGG | + | chr8_3:59415433-59415452 | None:intergenic | 30.0% | |
!!! | GAAAATATTTTGGAGTGTGA+TGG | - | chr8_3:59415960-59415979 | Msa1298570:CDS | 30.0% |
ATAATGTACCTTCAAGAGAA+GGG | + | chr8_3:59416018-59416037 | None:intergenic | 30.0% | |
AATAATGTACCTTCAAGAGA+AGG | + | chr8_3:59416019-59416038 | None:intergenic | 30.0% | |
!! | TGGACTTATTTTCAGCTTAT+TGG | - | chr8_3:59416066-59416085 | Msa1298570:CDS | 30.0% |
TTTGGATGTGTAAATGTGTT+TGG | - | chr8_3:59416231-59416250 | Msa1298570:CDS | 30.0% | |
TTGGATGTGTAAATGTGTTT+GGG | - | chr8_3:59416232-59416251 | Msa1298570:CDS | 30.0% | |
CTAGGTTAAGAATTGCAATA+TGG | - | chr8_3:59416321-59416340 | Msa1298570:CDS | 30.0% | |
AAGAATTGCAATATGGGAAT+TGG | - | chr8_3:59416328-59416347 | Msa1298570:CDS | 30.0% | |
TCAGATAAGTGTGTATGTAT+AGG | + | chr8_3:59416630-59416649 | None:intergenic | 30.0% | |
ATACACACTTATCTGATAAG+CGG | - | chr8_3:59416634-59416653 | Msa1298570:intron | 30.0% | |
AAGGATATATCAGAAAATGG+CGG | - | chr8_3:59416866-59416885 | Msa1298570:intron | 30.0% | |
ATACCTATCATCCTTAAACT+TGG | + | chr8_3:59416907-59416926 | None:intergenic | 30.0% | |
!!! | TGATAGGTATCGATTTTGTA+AGG | - | chr8_3:59416917-59416936 | Msa1298570:intron | 30.0% |
!!! | AGGAGAATTTTGAGTTTATG+TGG | - | chr8_3:59416937-59416956 | Msa1298570:intron | 30.0% |
!!! | GGAGAATTTTGAGTTTATGT+GGG | - | chr8_3:59416938-59416957 | Msa1298570:intron | 30.0% |
!! | TTCTCAACTTTAAAGTCCAT+TGG | - | chr8_3:59416975-59416994 | Msa1298570:intron | 30.0% |
!! | TCTCAACTTTAAAGTCCATT+GGG | - | chr8_3:59416976-59416995 | Msa1298570:intron | 30.0% |
! | TGAAGCAAGACTAATTTTCT+GGG | + | chr8_3:59417216-59417235 | None:intergenic | 30.0% |
GTATTGAATATTCTTCGAGA+TGG | - | chr8_3:59417656-59417675 | Msa1298570:intron | 30.0% | |
AATTAAATCCACATCTTGAG+GGG | + | chr8_3:59417894-59417913 | None:intergenic | 30.0% | |
GAATTAAATCCACATCTTGA+GGG | + | chr8_3:59417895-59417914 | None:intergenic | 30.0% | |
TTCCTTCAGCATTTCAAATT+CGG | - | chr8_3:59418032-59418051 | Msa1298570:CDS | 30.0% | |
TAAACTTTCCAAAACATCCA+AGG | + | chr8_3:59418314-59418333 | None:intergenic | 30.0% | |
! | TGCTTTTCAAATCAGATAAC+TGG | + | chr8_3:59418441-59418460 | None:intergenic | 30.0% |
CAGTGAAGAATTAGAAGAAA+AGG | - | chr8_3:59418702-59418721 | Msa1298570:CDS | 30.0% | |
TTACTCTTGACATTAATCCT+TGG | - | chr8_3:59419031-59419050 | Msa1298570:CDS | 30.0% | |
AGATGTGCTTTCTTTAACAA+CGG | - | chr8_3:59419056-59419075 | Msa1298570:CDS | 30.0% | |
TTTGGGGATGAAAGTTAAAA+GGG | - | chr8_3:59419120-59419139 | Msa1298570:CDS | 30.0% | |
CTAATTGATATGCAATGCAA+TGG | + | chr8_3:59419158-59419177 | None:intergenic | 30.0% | |
AATGATAACTGAGTAAGTAG+AGG | + | chr8_3:59419228-59419247 | None:intergenic | 30.0% | |
TCTACTTACTCAGTTATCAT+TGG | - | chr8_3:59419227-59419246 | Msa1298570:CDS | 30.0% | |
AAACAATGAATCTAAGGATC+TGG | + | chr8_3:59419354-59419373 | None:intergenic | 30.0% | |
AGATCCTTAGATTCATTGTT+TGG | - | chr8_3:59419353-59419372 | Msa1298570:CDS | 30.0% | |
ATTTATTTAGAAAAACGGGG+TGG | + | chr8_3:59419531-59419550 | None:intergenic | 30.0% | |
TATTGCTTTCTAATACTTGC+TGG | - | chr8_3:59419714-59419733 | Msa1298570:intron | 30.0% | |
ATTGCTTTCTAATACTTGCT+GGG | - | chr8_3:59419715-59419734 | Msa1298570:intron | 30.0% | |
!! | GGGATTTATTTTTCATAAGC+TGG | - | chr8_3:59419783-59419802 | Msa1298570:intron | 30.0% |
AAAAATGTATCTGCATGTGT+CGG | + | chr8_3:59419978-59419997 | None:intergenic | 30.0% | |
ACTAAAATAGACACAGACAT+CGG | + | chr8_3:59420026-59420045 | None:intergenic | 30.0% | |
ACACCTTTGGATATATACAT+AGG | + | chr8_3:59420346-59420365 | None:intergenic | 30.0% | |
AGTTTGAATCAATTATGGCA+CGG | + | chr8_3:59420384-59420403 | None:intergenic | 30.0% | |
TTGATTCAAACTTGCAAGTA+AGG | - | chr8_3:59420392-59420411 | Msa1298570:intron | 30.0% | |
ATACTTATCTCTGTGACTTA+TGG | + | chr8_3:59420506-59420525 | None:intergenic | 30.0% | |
TCGAATTCTAATCTCAGTAA+AGG | - | chr8_3:59420654-59420673 | Msa1298570:CDS | 30.0% | |
GTTGTAATATTTGTGGTGAT+AGG | + | chr8_3:59420767-59420786 | None:intergenic | 30.0% | |
AGCTTTCGTTGTAATATTTG+TGG | + | chr8_3:59420774-59420793 | None:intergenic | 30.0% | |
GTCATACTCATACTACAAAA+TGG | + | chr8_3:59420952-59420971 | None:intergenic | 30.0% | |
!! | GACATAACTTTTGATGACAT+TGG | - | chr8_3:59420999-59421018 | Msa1298570:CDS | 30.0% |
AAGGAGAAGTTTCTTGTTCT+CGG | + | chr8_3:59415706-59415725 | None:intergenic | 35.0% | |
! | TTTATGTGTTAGGGCTTGTT+TGG | - | chr8_3:59416041-59416060 | Msa1298570:CDS | 35.0% |
TATTGGAGTTCCAAATTGAC+CGG | - | chr8_3:59416198-59416217 | Msa1298570:CDS | 35.0% | |
AAAGTTAGCTCAAACGATGA+CGG | + | chr8_3:59416261-59416280 | None:intergenic | 35.0% | |
! | TCATCGTTTGAGCTAACTTT+TGG | - | chr8_3:59416261-59416280 | Msa1298570:CDS | 35.0% |
! | CATCGTTTGAGCTAACTTTT+GGG | - | chr8_3:59416262-59416281 | Msa1298570:CDS | 35.0% |
GCAATATGGGAATTGGATTA+AGG | - | chr8_3:59416335-59416354 | Msa1298570:CDS | 35.0% | |
!! | GATGGGTATTGAAGTTGTAT+TGG | - | chr8_3:59416373-59416392 | Msa1298570:CDS | 35.0% |
AAAGTTAGCTCAAAGGATGA+GGG | + | chr8_3:59416451-59416470 | None:intergenic | 35.0% | |
AAAAGTTAGCTCAAAGGATG+AGG | + | chr8_3:59416452-59416471 | None:intergenic | 35.0% | |
! | TCATCCTTTGAGCTAACTTT+TGG | - | chr8_3:59416451-59416470 | Msa1298570:intron | 35.0% |
! | CATCCTTTGAGCTAACTTTT+GGG | - | chr8_3:59416452-59416471 | Msa1298570:intron | 35.0% |
TATGCTATCATGTAGAGCTT+TGG | + | chr8_3:59416538-59416557 | None:intergenic | 35.0% | |
!!! | TGAGTGATTTTTGGGTTTTG+AGG | - | chr8_3:59416729-59416748 | Msa1298570:CDS | 35.0% |
!! | AAATCAGCTCTAGGTAACAA+TGG | + | chr8_3:59416805-59416824 | None:intergenic | 35.0% |
TATTCTTCTCAGCTGAGATA+TGG | - | chr8_3:59416840-59416859 | Msa1298570:intron | 35.0% | |
ATTCTTCTCAGCTGAGATAT+GGG | - | chr8_3:59416841-59416860 | Msa1298570:intron | 35.0% | |
GCCAAGGATATATCAGAAAA+TGG | - | chr8_3:59416863-59416882 | Msa1298570:intron | 35.0% | |
!! | GCCATTTTCTGATATATCCT+TGG | + | chr8_3:59416867-59416886 | None:intergenic | 35.0% |
AGGATATATCAGAAAATGGC+GGG | - | chr8_3:59416867-59416886 | Msa1298570:intron | 35.0% | |
TTAAACTTGGCAGCTACATT+TGG | + | chr8_3:59416894-59416913 | None:intergenic | 35.0% | |
AAATGTAGCTGCCAAGTTTA+AGG | - | chr8_3:59416893-59416912 | Msa1298570:intron | 35.0% | |
!! | CTTTAAAGTTGAGAAGTCAG+TGG | + | chr8_3:59416970-59416989 | None:intergenic | 35.0% |
!!! | GCACTCAACCTCATTTTTTT+GGG | - | chr8_3:59416998-59417017 | Msa1298570:intron | 35.0% |
TTCAAATTCTCTCTGTAGAG+CGG | + | chr8_3:59417068-59417087 | None:intergenic | 35.0% | |
GAATTTGAAGGATCTAAGTC+TGG | - | chr8_3:59417079-59417098 | Msa1298570:intron | 35.0% | |
GATTCCAAGTTACCTTATGA+GGG | - | chr8_3:59417161-59417180 | Msa1298570:intron | 35.0% | |
AATTGGAAAAGACCCTCATA+AGG | + | chr8_3:59417176-59417195 | None:intergenic | 35.0% | |
! | CTGAAGCAAGACTAATTTTC+TGG | + | chr8_3:59417217-59417236 | None:intergenic | 35.0% |
!! | TGATGAGTTGATTGACTTGT+TGG | - | chr8_3:59417241-59417260 | Msa1298570:intron | 35.0% |
!! | TTTTAGAGGCTCATAACAAG+TGG | + | chr8_3:59417324-59417343 | None:intergenic | 35.0% |
!! | ATGAGCCTCTAAAATATGTG+AGG | - | chr8_3:59417330-59417349 | Msa1298570:intron | 35.0% |
!! | TGAGTCCTCACATATTTTAG+AGG | + | chr8_3:59417338-59417357 | None:intergenic | 35.0% |
AAGGCAATAAATCTTTGACG+GGG | + | chr8_3:59417459-59417478 | None:intergenic | 35.0% | |
CAAGGCAATAAATCTTTGAC+GGG | + | chr8_3:59417460-59417479 | None:intergenic | 35.0% | |
CCAAGGCAATAAATCTTTGA+CGG | + | chr8_3:59417461-59417480 | None:intergenic | 35.0% | |
! | ATGATTTGAGGTTTCAAGCT+CGG | + | chr8_3:59417486-59417505 | None:intergenic | 35.0% |
ATGCTTTACCACATGATTTG+AGG | + | chr8_3:59417498-59417517 | None:intergenic | 35.0% | |
!! | TCATGTGGTAAAGCATTTTG+CGG | - | chr8_3:59417502-59417521 | Msa1298570:intron | 35.0% |
TTACATTTGTCGAAGAGGAT+TGG | - | chr8_3:59417549-59417568 | Msa1298570:intron | 35.0% | |
GTGATTGAGATTGCATTGTT+TGG | + | chr8_3:59417584-59417603 | None:intergenic | 35.0% | |
TGAAAAAGGGAATGTTCTCA+AGG | - | chr8_3:59417606-59417625 | Msa1298570:intron | 35.0% | |
GGAATTAAATCCACATCTTG+AGG | + | chr8_3:59417896-59417915 | None:intergenic | 35.0% | |
TCAGAGGTGATTTCAATATC+TGG | + | chr8_3:59417917-59417936 | None:intergenic | 35.0% | |
GATATTGAAATCACCTCTGA+TGG | - | chr8_3:59417917-59417936 | Msa1298570:CDS | 35.0% | |
! | ATAGACTACTGTTTCTCAGA+TGG | - | chr8_3:59417941-59417960 | Msa1298570:CDS | 35.0% |
! | TACTGTTTCTCAGATGGTAT+TGG | - | chr8_3:59417947-59417966 | Msa1298570:CDS | 35.0% |
! | AAATTTCACAGTCTTTTGCC+AGG | - | chr8_3:59417972-59417991 | Msa1298570:CDS | 35.0% |
! | TACCGAATTTGAAATGCTGA+AGG | + | chr8_3:59418037-59418056 | None:intergenic | 35.0% |
TCAGCATTTCAAATTCGGTA+TGG | - | chr8_3:59418037-59418056 | Msa1298570:CDS | 35.0% | |
!! | ATTCGGTATGGTGGATATAA+AGG | - | chr8_3:59418049-59418068 | Msa1298570:CDS | 35.0% |
CTCATCTTTAATTCCTAAGG+TGG | + | chr8_3:59418224-59418243 | None:intergenic | 35.0% | |
CACCTTAGGAATTAAAGATG+AGG | - | chr8_3:59418222-59418241 | Msa1298570:CDS | 35.0% | |
!! | AATTAAAGATGAGGCGCTTT+TGG | - | chr8_3:59418231-59418250 | Msa1298570:CDS | 35.0% |
! | AGGAAAGATGTTGACTGATA+AGG | - | chr8_3:59418282-59418301 | Msa1298570:CDS | 35.0% |
!! | CATAGGTTTTATGAGCCAAA+CGG | - | chr8_3:59418373-59418392 | Msa1298570:CDS | 35.0% |
TTGAGCATCATTGATAGGTA+AGG | + | chr8_3:59418403-59418422 | None:intergenic | 35.0% | |
TTACCTATCAATGATGCTCA+AGG | - | chr8_3:59418402-59418421 | Msa1298570:CDS | 35.0% | |
! | TAGTTTTTGCCACAGTTATG+CGG | + | chr8_3:59418549-59418568 | None:intergenic | 35.0% |
CATAACTGTGGCAAAAACTA+AGG | - | chr8_3:59418549-59418568 | Msa1298570:CDS | 35.0% | |
AGATGAAAACTTAAGGAACG+TGG | - | chr8_3:59418582-59418601 | Msa1298570:CDS | 35.0% | |
GATAGCACACGTATTATAGT+AGG | - | chr8_3:59418613-59418632 | Msa1298570:CDS | 35.0% | |
CACACGTATTATAGTAGGTA+AGG | - | chr8_3:59418618-59418637 | Msa1298570:CDS | 35.0% | |
ACGTATTATAGTAGGTAAGG+TGG | - | chr8_3:59418621-59418640 | Msa1298570:CDS | 35.0% | |
AATTAGAAGAAAAGGGCTTG+AGG | - | chr8_3:59418710-59418729 | Msa1298570:CDS | 35.0% | |
ATTAGAAGAAAAGGGCTTGA+GGG | - | chr8_3:59418711-59418730 | Msa1298570:CDS | 35.0% | |
TGCCTTGTATTTCCACAAAA+AGG | - | chr8_3:59418736-59418755 | Msa1298570:CDS | 35.0% | |
! | GTCCTTTTTGTGGAAATACA+AGG | + | chr8_3:59418741-59418760 | None:intergenic | 35.0% |
TATTTCCACAAAAAGGACCT+AGG | - | chr8_3:59418743-59418762 | Msa1298570:CDS | 35.0% | |
GGACCTAGGTATGTATATAA+TGG | - | chr8_3:59418757-59418776 | Msa1298570:CDS | 35.0% | |
! | AAACATCTTGTGACGACTTT+TGG | - | chr8_3:59418871-59418890 | Msa1298570:CDS | 35.0% |
ATCATGCACCAACAAAAGAA+GGG | - | chr8_3:59419089-59419108 | Msa1298570:CDS | 35.0% | |
! | CTTTGGGGATGAAAGTTAAA+AGG | - | chr8_3:59419119-59419138 | Msa1298570:CDS | 35.0% |
TGGCTATGCAAAACAATCTT+AGG | - | chr8_3:59419247-59419266 | Msa1298570:CDS | 35.0% | |
GGCTATGCAAAACAATCTTA+GGG | - | chr8_3:59419248-59419267 | Msa1298570:CDS | 35.0% | |
GCTATGCAAAACAATCTTAG+GGG | - | chr8_3:59419249-59419268 | Msa1298570:CDS | 35.0% | |
ATGAGGACAGCAAAACTTAA+GGG | + | chr8_3:59419323-59419342 | None:intergenic | 35.0% | |
TCCTTAGATTCATTGTTTGG+TGG | - | chr8_3:59419356-59419375 | Msa1298570:CDS | 35.0% | |
TCCACCAAACAATGAATCTA+AGG | + | chr8_3:59419360-59419379 | None:intergenic | 35.0% | |
TGGAAGCCTAATATCTAACA+AGG | + | chr8_3:59419422-59419441 | None:intergenic | 35.0% | |
!!! | ACTTTTATGAGTGTTGGTAC+TGG | - | chr8_3:59419455-59419474 | Msa1298570:CDS | 35.0% |
! | TTGGATTTTCAGTTTGAGCT+GGG | + | chr8_3:59419823-59419842 | None:intergenic | 35.0% |
! | ATTGGATTTTCAGTTTGAGC+TGG | + | chr8_3:59419824-59419843 | None:intergenic | 35.0% |
AGCTCAAACTGAAAATCCAA+TGG | - | chr8_3:59419823-59419842 | Msa1298570:intron | 35.0% | |
CAAGTACAAAGTATGCAACT+TGG | + | chr8_3:59419911-59419930 | None:intergenic | 35.0% | |
GCAACAGCAACAAACATATA+AGG | + | chr8_3:59420085-59420104 | None:intergenic | 35.0% | |
TCTCTTGGTTTCAAAGATCT+TGG | + | chr8_3:59420292-59420311 | None:intergenic | 35.0% | |
ATGAAATCTGGAAACTCTCT+TGG | + | chr8_3:59420307-59420326 | None:intergenic | 35.0% | |
AAGAGAGTTTCCAGATTTCA+TGG | - | chr8_3:59420306-59420325 | Msa1298570:intron | 35.0% | |
! | GAGTTTTCCTAATACACCTT+TGG | + | chr8_3:59420359-59420378 | None:intergenic | 35.0% |
ATCTCTTTGATGAGCTTCTA+TGG | - | chr8_3:59420538-59420557 | Msa1298570:CDS | 35.0% | |
!! | GCCATAAGTTGATATTCATG+CGG | + | chr8_3:59420724-59420743 | None:intergenic | 35.0% |
CCATGGAAAGCTTAAAAAAG+TGG | + | chr8_3:59420797-59420816 | None:intergenic | 35.0% | |
!!! | CCACTTTTTTAAGCTTTCCA+TGG | - | chr8_3:59420794-59420813 | Msa1298570:CDS | 35.0% |
! | TTAAGCTTTCCATGGATTGT+CGG | - | chr8_3:59420802-59420821 | Msa1298570:CDS | 35.0% |
TGTAAAAGCTATTATGGGAC+AGG | + | chr8_3:59420865-59420884 | None:intergenic | 35.0% | |
GAGTATGACATGTTCATCTA+CGG | - | chr8_3:59420963-59420982 | Msa1298570:CDS | 35.0% | |
AGTATGACATGTTCATCTAC+GGG | - | chr8_3:59420964-59420983 | Msa1298570:CDS | 35.0% | |
TGAAGGAATCACCATGGTTA+GGG | + | chr8_3:59415481-59415500 | None:intergenic | 40.0% | |
ATGAAGGAATCACCATGGTT+AGG | + | chr8_3:59415482-59415501 | None:intergenic | 40.0% | |
GATGGGAAAACCAGCATAAA+GGG | + | chr8_3:59415814-59415833 | None:intergenic | 40.0% | |
!!! | CTTTATGCTGGTTTTCCCAT+CGG | - | chr8_3:59415813-59415832 | Msa1298570:CDS | 40.0% |
CATGAGTGTGCTTCAATCAT+GGG | - | chr8_3:59415845-59415864 | Msa1298570:CDS | 40.0% | |
AAATCAAGTCTCTGCCTTTC+AGG | + | chr8_3:59415894-59415913 | None:intergenic | 40.0% | |
AAAGGCAGAGACTTGATTTC+TGG | - | chr8_3:59415895-59415914 | Msa1298570:CDS | 40.0% | |
AAGGCAGAGACTTGATTTCT+GGG | - | chr8_3:59415896-59415915 | Msa1298570:CDS | 40.0% | |
! | GATGGGTATTGTTCTGATGA+AGG | - | chr8_3:59415978-59415997 | Msa1298570:CDS | 40.0% |
AAGTTAGCTCAAACGATGAC+GGG | + | chr8_3:59416260-59416279 | None:intergenic | 40.0% | |
CATCCCAAAAGTTAGCTCAA+AGG | + | chr8_3:59416268-59416287 | None:intergenic | 40.0% | |
CATAAAGGGAAATCAGCTCT+AGG | + | chr8_3:59416814-59416833 | None:intergenic | 40.0% | |
GGATATATCAGAAAATGGCG+GGG | - | chr8_3:59416868-59416887 | Msa1298570:intron | 40.0% | |
CTGCCAAGTTTAAGGATGAT+AGG | - | chr8_3:59416901-59416920 | Msa1298570:intron | 40.0% | |
!!! | GGCACTCAACCTCATTTTTT+TGG | - | chr8_3:59416997-59417016 | Msa1298570:intron | 40.0% |
TCAAATTCTCTCTGTAGAGC+GGG | + | chr8_3:59417067-59417086 | None:intergenic | 40.0% | |
GCTCTACAGAGAGAATTTGA+AGG | - | chr8_3:59417067-59417086 | Msa1298570:intron | 40.0% | |
AAGGATCTAAGTCTGGAAGA+TGG | - | chr8_3:59417086-59417105 | Msa1298570:intron | 40.0% | |
GGATTCCAAGTTACCTTATG+AGG | - | chr8_3:59417160-59417179 | Msa1298570:intron | 40.0% | |
AAGACCCTCATAAGGTAACT+TGG | + | chr8_3:59417168-59417187 | None:intergenic | 40.0% | |
!! | GATTGACTTGTTGGTAAGCT+TGG | - | chr8_3:59417250-59417269 | Msa1298570:intron | 40.0% |
AAGCTTGGATGCAGAAACTA+AGG | - | chr8_3:59417265-59417284 | Msa1298570:intron | 40.0% | |
TTCTCCCATCGCAACAAAAA+AGG | - | chr8_3:59417390-59417409 | Msa1298570:intron | 40.0% | |
!!! | CCAACCTTTTTTGTTGCGAT+GGG | + | chr8_3:59417397-59417416 | None:intergenic | 40.0% |
!!! | ACCAACCTTTTTTGTTGCGA+TGG | + | chr8_3:59417398-59417417 | None:intergenic | 40.0% |
ATCGCAACAAAAAAGGTTGG+TGG | - | chr8_3:59417397-59417416 | Msa1298570:intron | 40.0% | |
AATCTTTGACGGGGTAATCA+AGG | + | chr8_3:59417450-59417469 | None:intergenic | 40.0% | |
CCGTCAAAGATTTATTGCCT+TGG | - | chr8_3:59417458-59417477 | Msa1298570:intron | 40.0% | |
! | TGATTTGAGGTTTCAAGCTC+GGG | + | chr8_3:59417485-59417504 | None:intergenic | 40.0% |
GCTTGAAACCTCAAATCATG+TGG | - | chr8_3:59417487-59417506 | Msa1298570:intron | 40.0% | |
CATATGCTTCAGACTTCATG+AGG | - | chr8_3:59417525-59417544 | Msa1298570:intron | 40.0% | |
GAGGATTACATTTGTCGAAG+AGG | - | chr8_3:59417544-59417563 | Msa1298570:intron | 40.0% | |
AACTGCGGTCAAATTCTGTT+TGG | - | chr8_3:59417729-59417748 | Msa1298570:intron | 40.0% | |
AAGCAGCAGATATCAGAGAA+TGG | - | chr8_3:59417777-59417796 | Msa1298570:intron | 40.0% | |
AGCAGATATCAGAGAATGGA+TGG | - | chr8_3:59417781-59417800 | Msa1298570:intron | 40.0% | |
GCAGATATCAGAGAATGGAT+GGG | - | chr8_3:59417782-59417801 | Msa1298570:intron | 40.0% | |
TTCCAAATGTGCAGCAAGAA+TGG | - | chr8_3:59417829-59417848 | Msa1298570:CDS | 40.0% | |
TCCAAATGTGCAGCAAGAAT+GGG | - | chr8_3:59417830-59417849 | Msa1298570:CDS | 40.0% | |
!! | GTCCAGGCAAACTTTTGAAA+TGG | - | chr8_3:59417868-59417887 | Msa1298570:CDS | 40.0% |
ACAGTAGTCTATACCATCAG+AGG | + | chr8_3:59417933-59417952 | None:intergenic | 40.0% | |
GCATTTCAAATTCGGTATGG+TGG | - | chr8_3:59418040-59418059 | Msa1298570:CDS | 40.0% | |
!! | GACGCAAAGCATTCTGTTTT+TGG | + | chr8_3:59418143-59418162 | None:intergenic | 40.0% |
GAATGCTTTGCGTCACTAAA+TGG | - | chr8_3:59418149-59418168 | Msa1298570:CDS | 40.0% | |
ATCTCTCGATTGAGAAAGCA+CGG | + | chr8_3:59418187-59418206 | None:intergenic | 40.0% | |
AATTCCTAAGGTGGACAACA+GGG | + | chr8_3:59418215-59418234 | None:intergenic | 40.0% | |
TAATTCCTAAGGTGGACAAC+AGG | + | chr8_3:59418216-59418235 | None:intergenic | 40.0% | |
CGCCTCATCTTTAATTCCTA+AGG | + | chr8_3:59418227-59418246 | None:intergenic | 40.0% | |
TTCTAGTCAAGATGCTGCAT+AGG | - | chr8_3:59418356-59418375 | Msa1298570:CDS | 40.0% | |
!! | GAGACTGGTCTATTGAACTA+TGG | - | chr8_3:59418511-59418530 | Msa1298570:CDS | 40.0% |
CAGTTATGCGGACAAATACT+TGG | + | chr8_3:59418537-59418556 | None:intergenic | 40.0% | |
AGTATTTGTCCGCATAACTG+TGG | - | chr8_3:59418537-59418556 | Msa1298570:CDS | 40.0% | |
GAAAACTTAAGGAACGTGGA+TGG | - | chr8_3:59418586-59418605 | Msa1298570:CDS | 40.0% | |
! | ACATACCTAGGTCCTTTTTG+TGG | + | chr8_3:59418751-59418770 | None:intergenic | 40.0% |
! | AAAGAAAGCACATCTGACCA+AGG | + | chr8_3:59419051-59419070 | None:intergenic | 40.0% |
CATCATGCACCAACAAAAGA+AGG | - | chr8_3:59419088-59419107 | Msa1298570:CDS | 40.0% | |
TCATGCACCAACAAAAGAAG+GGG | - | chr8_3:59419090-59419109 | Msa1298570:CDS | 40.0% | |
! | AAAAGAAGGGGGCATATCTT+TGG | - | chr8_3:59419102-59419121 | Msa1298570:CDS | 40.0% |
! | AAAGAAGGGGGCATATCTTT+GGG | - | chr8_3:59419103-59419122 | Msa1298570:CDS | 40.0% |
AGTTAAAAGGGCCATTAGCT+AGG | - | chr8_3:59419132-59419151 | Msa1298570:CDS | 40.0% | |
CATGAGGACAGCAAAACTTA+AGG | + | chr8_3:59419324-59419343 | None:intergenic | 40.0% | |
TTAGAAAAACGGGGTGGATA+AGG | + | chr8_3:59419525-59419544 | None:intergenic | 40.0% | |
GTAGACTAGGAAAACACAAC+AGG | - | chr8_3:59419590-59419609 | Msa1298570:CDS | 40.0% | |
ACACAACAGGTTATTGCATG+AGG | - | chr8_3:59419603-59419622 | Msa1298570:CDS | 40.0% | |
CACAACAGGTTATTGCATGA+GGG | - | chr8_3:59419604-59419623 | Msa1298570:CDS | 40.0% | |
ACAACAGGTTATTGCATGAG+GGG | - | chr8_3:59419605-59419624 | Msa1298570:CDS | 40.0% | |
!! | GAAAATCCAATGGACTACAC+AGG | - | chr8_3:59419833-59419852 | Msa1298570:intron | 40.0% |
ACCTTATGGTCCATTATACG+AGG | + | chr8_3:59419866-59419885 | None:intergenic | 40.0% | |
TTACCTCTAGTGTCACCTTA+TGG | + | chr8_3:59419880-59419899 | None:intergenic | 40.0% | |
AAAATAGACACAGACATCGG+TGG | + | chr8_3:59420023-59420042 | None:intergenic | 40.0% | |
! | TATGTTTGTTGCTGTTGCGT+AGG | - | chr8_3:59420087-59420106 | Msa1298570:intron | 40.0% |
! | CTCCAGACATTTTCTACTCT+TGG | + | chr8_3:59420209-59420228 | None:intergenic | 40.0% |
! | GAGTAGAAAATGTCTGGAGT+TGG | - | chr8_3:59420210-59420229 | Msa1298570:intron | 40.0% |
CTTTGCAAAATCAACTGCCA+TGG | + | chr8_3:59420248-59420267 | None:intergenic | 40.0% | |
!! | GCAGTTGATTTTGCAAAGAC+TGG | - | chr8_3:59420250-59420269 | Msa1298570:intron | 40.0% |
AAAGATCTTGGCATTTCTGC+AGG | + | chr8_3:59420280-59420299 | None:intergenic | 40.0% | |
AGTTTCCAGATTTCATGGAG+AGG | - | chr8_3:59420311-59420330 | Msa1298570:intron | 40.0% | |
TCAAACCTCTCCATGAAATC+TGG | + | chr8_3:59420319-59420338 | None:intergenic | 40.0% | |
CTGGTGATCATATGCTTCTT+TGG | + | chr8_3:59420446-59420465 | None:intergenic | 40.0% | |
CAAAACCATCAACTTCAAGC+TGG | + | chr8_3:59420465-59420484 | None:intergenic | 40.0% | |
!!! | GCTTGAAGTTGATGGTTTTG+AGG | - | chr8_3:59420465-59420484 | Msa1298570:intron | 40.0% |
CTTATCTCTGTGACTTATGG+CGG | + | chr8_3:59420503-59420522 | None:intergenic | 40.0% | |
ACTGAGGATGAAATGCTAAC+TGG | - | chr8_3:59420568-59420587 | Msa1298570:CDS | 40.0% | |
CTTATTTGCAGAGGGATAAC+AGG | - | chr8_3:59420611-59420630 | Msa1298570:CDS | 40.0% | |
TTCAGCTGGAAGCTAAAGAA+TGG | - | chr8_3:59420680-59420699 | Msa1298570:CDS | 40.0% | |
GCCGCATGAATATCAACTTA+TGG | - | chr8_3:59420720-59420739 | Msa1298570:CDS | 40.0% | |
ATCAACTTATGGCATCTGCA+TGG | - | chr8_3:59420731-59420750 | Msa1298570:CDS | 40.0% | |
ATTTGTGGTGATAGGTCACA+TGG | + | chr8_3:59420759-59420778 | None:intergenic | 40.0% | |
AAAATGTCACCGACAATCCA+TGG | + | chr8_3:59420814-59420833 | None:intergenic | 40.0% | |
AAAGCTATTATGGGACAGGA+GGG | + | chr8_3:59420861-59420880 | None:intergenic | 40.0% | |
AAAAGCTATTATGGGACAGG+AGG | + | chr8_3:59420862-59420881 | None:intergenic | 40.0% | |
TTCGGATGAAGGAATCACCA+TGG | + | chr8_3:59415487-59415506 | None:intergenic | 45.0% | |
GAAGATTTCGAGAGCGAAGA+CGG | + | chr8_3:59415598-59415617 | None:intergenic | 45.0% | |
TACACCAACTGGAAATCTCG+CGG | - | chr8_3:59415624-59415643 | Msa1298570:three_prime_UTR | 45.0% | |
AGGCCTAGGAATGATGTCAT+CGG | + | chr8_3:59415760-59415779 | None:intergenic | 45.0% | |
!! | AAAGGGCACCATTGTTGATG+CGG | + | chr8_3:59415797-59415816 | None:intergenic | 45.0% |
AACAATGGTGCCCTTTATGC+TGG | - | chr8_3:59415801-59415820 | Msa1298570:CDS | 45.0% | |
CGATGGGAAAACCAGCATAA+AGG | + | chr8_3:59415815-59415834 | None:intergenic | 45.0% | |
TGAAGCACACTCATGCAATC+AGG | + | chr8_3:59415840-59415859 | None:intergenic | 45.0% | |
GCATGAGTGTGCTTCAATCA+TGG | - | chr8_3:59415844-59415863 | Msa1298570:CDS | 45.0% | |
AGTGTGCTTCAATCATGGGA+AGG | - | chr8_3:59415849-59415868 | Msa1298570:CDS | 45.0% | |
! | ACTTGATTTCTGGGTCACTC+AGG | - | chr8_3:59415905-59415924 | Msa1298570:CDS | 45.0% |
! | CTTGATTTCTGGGTCACTCA+GGG | - | chr8_3:59415906-59415925 | Msa1298570:CDS | 45.0% |
! | GTGTTAGGGCTTGTTTGGAT+TGG | - | chr8_3:59416046-59416065 | Msa1298570:CDS | 45.0% |
!! | TCCAAATTGACCGGCTTTTC+AGG | - | chr8_3:59416207-59416226 | Msa1298570:CDS | 45.0% |
ACATCCAAAGCCTGAAAAGC+CGG | + | chr8_3:59416220-59416239 | None:intergenic | 45.0% | |
ATTAAGGACTCACGTCGTTG+AGG | - | chr8_3:59416351-59416370 | Msa1298570:CDS | 45.0% | |
AAATGAGGTTGAGTGCCCAA+TGG | + | chr8_3:59416994-59417013 | None:intergenic | 45.0% | |
ACAAGCGGAACTGTTTCAGT+TGG | + | chr8_3:59417128-59417147 | None:intergenic | 45.0% | |
TCCAAACGACACTTGACAAG+CGG | + | chr8_3:59417143-59417162 | None:intergenic | 45.0% | |
CCCATCGCAACAAAAAAGGT+TGG | - | chr8_3:59417394-59417413 | Msa1298570:intron | 45.0% | |
CTTCGAGATGGGATTCTAGT+TGG | - | chr8_3:59417668-59417687 | Msa1298570:intron | 45.0% | |
CTGCACATTTGGAAACACTG+CGG | + | chr8_3:59417823-59417842 | None:intergenic | 45.0% | |
ACCCATTCTTGCTGCACATT+TGG | + | chr8_3:59417834-59417853 | None:intergenic | 45.0% | |
GGCCATTTCAAAAGTTTGCC+TGG | + | chr8_3:59417873-59417892 | None:intergenic | 45.0% | |
! | TAGCTTTTCTGCAAGTTGCC+TGG | + | chr8_3:59417993-59418012 | None:intergenic | 45.0% |
ATATCCCTGTTGTCCACCTT+AGG | - | chr8_3:59418208-59418227 | Msa1298570:CDS | 45.0% | |
GAGCCTTGAGCATCATTGAT+AGG | + | chr8_3:59418408-59418427 | None:intergenic | 45.0% | |
ATGCCGAATATTTGTGCCCA+AGG | - | chr8_3:59418462-59418481 | Msa1298570:CDS | 45.0% | |
TGCCGAATATTTGTGCCCAA+GGG | - | chr8_3:59418463-59418482 | Msa1298570:CDS | 45.0% | |
AAAAACCCTTGTCTTCACCC+AGG | - | chr8_3:59418652-59418671 | Msa1298570:CDS | 45.0% | |
TATCTCCTGGGTGAAGACAA+GGG | + | chr8_3:59418660-59418679 | None:intergenic | 45.0% | |
ATATCTCCTGGGTGAAGACA+AGG | + | chr8_3:59418661-59418680 | None:intergenic | 45.0% | |
CAAGGACTCTGATATCTCCT+GGG | + | chr8_3:59418672-59418691 | None:intergenic | 45.0% | |
TCAAGGACTCTGATATCTCC+TGG | + | chr8_3:59418673-59418692 | None:intergenic | 45.0% | |
CTTCACTGTAGACAGCATCA+AGG | + | chr8_3:59418690-59418709 | None:intergenic | 45.0% | |
CATGCACCAACAAAAGAAGG+GGG | - | chr8_3:59419091-59419110 | Msa1298570:CDS | 45.0% | |
! | GATATGCCCCCTTCTTTTGT+TGG | + | chr8_3:59419100-59419119 | None:intergenic | 45.0% |
! | AAGAAGGGGGCATATCTTTG+GGG | - | chr8_3:59419104-59419123 | Msa1298570:CDS | 45.0% |
CAATGCAATGGCCTAGCTAA+TGG | + | chr8_3:59419146-59419165 | None:intergenic | 45.0% | |
AGGATCTGGTTATGTGCATG+AGG | + | chr8_3:59419340-59419359 | None:intergenic | 45.0% | |
! | CTAATACTTGCTGGGTCTAC+AGG | - | chr8_3:59419723-59419742 | Msa1298570:intron | 45.0% |
CTTCTTCCTGTGTAGTCCAT+TGG | + | chr8_3:59419842-59419861 | None:intergenic | 45.0% | |
!! | CAATGGACTACACAGGAAGA+AGG | - | chr8_3:59419840-59419859 | Msa1298570:intron | 45.0% |
AGGAAGAAGGCCTCGTATAA+TGG | - | chr8_3:59419853-59419872 | Msa1298570:intron | 45.0% | |
!! | GCCTCGTATAATGGACCATA+AGG | - | chr8_3:59419862-59419881 | Msa1298570:intron | 45.0% |
GTCAGCATGAACCAAATGTG+CGG | + | chr8_3:59420170-59420189 | None:intergenic | 45.0% | |
!! | TCTTGGCCTTATCGTGTTCA+CGG | + | chr8_3:59420192-59420211 | None:intergenic | 45.0% |
GGCCAAGAGTAGAAAATGTC+TGG | - | chr8_3:59420204-59420223 | Msa1298570:intron | 45.0% | |
GATCACCAGCTTGAAGTTGA+TGG | - | chr8_3:59420457-59420476 | Msa1298570:intron | 45.0% | |
CAGAGGGATAACAGGAGATA+CGG | - | chr8_3:59420619-59420638 | Msa1298570:CDS | 45.0% | |
CAGGAGATACGGAGATATGA+AGG | - | chr8_3:59420630-59420649 | Msa1298570:CDS | 45.0% | |
CTCAGTAAAGGATCTTCAGC+TGG | - | chr8_3:59420666-59420685 | Msa1298570:CDS | 45.0% | |
AAGCTATTATGGGACAGGAG+GGG | + | chr8_3:59420860-59420879 | None:intergenic | 45.0% | |
TTCATCTACGGGTAGCACTT+GGG | - | chr8_3:59420975-59420994 | Msa1298570:CDS | 45.0% | |
!!! | ATCTAAATAATTTATTTTAA+GGG | - | chr8_3:59421064-59421083 | Msa1298570:exon | 5.0% |
!! | TGGTTTCGAGGTATCGGAGA+AGG | + | chr8_3:59415560-59415579 | None:intergenic | 50.0% |
CAACGGTGGTTTCGAGGTAT+CGG | + | chr8_3:59415566-59415585 | None:intergenic | 50.0% | |
TCTTCAGCGACTACACCAAC+TGG | - | chr8_3:59415613-59415632 | Msa1298570:three_prime_UTR | 50.0% | |
TACTCCGCGAGATTTCCAGT+TGG | + | chr8_3:59415631-59415650 | None:intergenic | 50.0% | |
AACTGGAAATCTCGCGGAGT+AGG | - | chr8_3:59415630-59415649 | Msa1298570:three_prime_UTR | 50.0% | |
CCAACGTCTCGAACTGAACA+CGG | + | chr8_3:59415656-59415675 | None:intergenic | 50.0% | |
CTTGTTCTCGGCGAGAGTTA+GGG | + | chr8_3:59415694-59415713 | None:intergenic | 50.0% | |
TCTTGTTCTCGGCGAGAGTT+AGG | + | chr8_3:59415695-59415714 | None:intergenic | 50.0% | |
GACAGAGGAAATGGGAGCTA+AGG | + | chr8_3:59415725-59415744 | None:intergenic | 50.0% | |
! | AGCGTCGAGACAGAGGAAAT+GGG | + | chr8_3:59415733-59415752 | None:intergenic | 50.0% |
!! | AAGCGTCGAGACAGAGGAAA+TGG | + | chr8_3:59415734-59415753 | None:intergenic | 50.0% |
CCTAGGAATGATGTCATCGG+AGG | + | chr8_3:59415757-59415776 | None:intergenic | 50.0% | |
CCTCCGATGACATCATTCCT+AGG | - | chr8_3:59415754-59415773 | Msa1298570:CDS | 50.0% | |
CCATTGTTGATGCGGTTACG+AGG | + | chr8_3:59415789-59415808 | None:intergenic | 50.0% | |
CCTCGTAACCGCATCAACAA+TGG | - | chr8_3:59415786-59415805 | Msa1298570:CDS | 50.0% | |
CTCATGCAATCAGGACCGAT+GGG | + | chr8_3:59415831-59415850 | None:intergenic | 50.0% | |
ACTCATGCAATCAGGACCGA+TGG | + | chr8_3:59415832-59415851 | None:intergenic | 50.0% | |
!! | CAATCATGGGAAGGTGTTCG+AGG | - | chr8_3:59415858-59415877 | Msa1298570:CDS | 50.0% |
!! | ATGGGAAGGTGTTCGAGGTT+GGG | - | chr8_3:59415863-59415882 | Msa1298570:CDS | 50.0% |
GAGGTTGGGTTATGCCTGAA+AGG | - | chr8_3:59415877-59415896 | Msa1298570:CDS | 50.0% | |
!! | ACCTTCAAGAGAAGGGCGTT+GGG | + | chr8_3:59416011-59416030 | None:intergenic | 50.0% |
! | TACCTTCAAGAGAAGGGCGT+TGG | + | chr8_3:59416012-59416031 | None:intergenic | 50.0% |
GCCTGAAAAGCCGGTCAATT+TGG | + | chr8_3:59416211-59416230 | None:intergenic | 50.0% | |
!! | TTGACCGGCTTTTCAGGCTT+TGG | - | chr8_3:59416213-59416232 | Msa1298570:CDS | 50.0% |
AACCTAGACCAGAGCAACGT+GGG | + | chr8_3:59416402-59416421 | None:intergenic | 50.0% | |
! | TCCGCTTGTCAAGTGTCGTT+TGG | - | chr8_3:59417139-59417158 | Msa1298570:intron | 50.0% |
CCTTCTCTGCTAGTCAACTG+CGG | - | chr8_3:59417714-59417733 | Msa1298570:intron | 50.0% | |
GTCAGTTGTTCAGTTCGTCC+AGG | - | chr8_3:59417852-59417871 | Msa1298570:CDS | 50.0% | |
TGAAATGGCCCCTCAAGATG+TGG | - | chr8_3:59417883-59417902 | Msa1298570:CDS | 50.0% | |
GAGGATCAACTGCAGTTGCT+AGG | - | chr8_3:59418262-59418281 | Msa1298570:CDS | 50.0% | |
GACTGATAAGGAAGCAGCCT+TGG | - | chr8_3:59418294-59418313 | Msa1298570:CDS | 50.0% | |
! | GGAAGCAGCCTTGGATGTTT+TGG | - | chr8_3:59418303-59418322 | Msa1298570:CDS | 50.0% |
GATAGGTAAGGCTCACCGTT+TGG | + | chr8_3:59418391-59418410 | None:intergenic | 50.0% | |
GGCCCTTGGGCACAAATATT+CGG | + | chr8_3:59418468-59418487 | None:intergenic | 50.0% | |
CCAAGCAGCCAATCAGAACT+CGG | + | chr8_3:59418489-59418508 | None:intergenic | 50.0% | |
ATTGGCTGCTTGGATGAGAC+TGG | - | chr8_3:59418496-59418515 | Msa1298570:CDS | 50.0% | |
!! | TGCTCTGGAGGTGATCTTGA+CGG | - | chr8_3:59419761-59419780 | Msa1298570:intron | 50.0% |
GGACCATAAGGTGACACTAG+AGG | - | chr8_3:59419874-59419893 | Msa1298570:intron | 50.0% | |
!! | GACACGTGTTGGTGCTACAT+AGG | + | chr8_3:59419937-59419956 | None:intergenic | 50.0% |
TGAGTGACATCGACACGTGT+TGG | + | chr8_3:59419948-59419967 | None:intergenic | 50.0% | |
TGCTATCTCCACCGCACATT+TGG | - | chr8_3:59420156-59420175 | Msa1298570:intron | 50.0% | |
AGCATGAACCAAATGTGCGG+TGG | + | chr8_3:59420167-59420186 | None:intergenic | 50.0% | |
TGCTGACCGTGAACACGATA+AGG | - | chr8_3:59420183-59420202 | Msa1298570:intron | 50.0% | |
CTTCTATGGTGCAACGACTG+AGG | - | chr8_3:59420552-59420571 | Msa1298570:CDS | 50.0% | |
!! | ACCGTGCGTCTTATTTGCAG+AGG | - | chr8_3:59420602-59420621 | Msa1298570:CDS | 50.0% |
CCCTCTGCAAATAAGACGCA+CGG | + | chr8_3:59420606-59420625 | None:intergenic | 50.0% | |
!! | CCGTGCGTCTTATTTGCAGA+GGG | - | chr8_3:59420603-59420622 | Msa1298570:CDS | 50.0% |
GTTCATCTACGGGTAGCACT+TGG | - | chr8_3:59420974-59420993 | Msa1298570:CDS | 50.0% | |
!! | AGGGTCTTGTTAACGAGTGC+CGG | - | chr8_3:59421083-59421102 | Msa1298570:five_prime_UTR | 50.0% |
CACTCTCACTGCCCTAACCA+TGG | - | chr8_3:59415467-59415486 | Msa1298570:three_prime_UTR | 55.0% | |
ACGGTGGGTGTTTCGGATGA+AGG | + | chr8_3:59415498-59415517 | None:intergenic | 55.0% | |
!! | ATGTTGGTGACGCGAACGGT+GGG | + | chr8_3:59415513-59415532 | None:intergenic | 55.0% |
!! | TATGTTGGTGACGCGAACGG+TGG | + | chr8_3:59415514-59415533 | None:intergenic | 55.0% |
!! | GGGTATGTTGGTGACGCGAA+CGG | + | chr8_3:59415517-59415536 | None:intergenic | 55.0% |
GTATCGGAGAAGGTCGTTGG+CGG | + | chr8_3:59415550-59415569 | None:intergenic | 55.0% | |
!! | GAGGTATCGGAGAAGGTCGT+TGG | + | chr8_3:59415553-59415572 | None:intergenic | 55.0% |
CGATACCTCGAAACCACCGT+TGG | - | chr8_3:59415564-59415583 | Msa1298570:three_prime_UTR | 55.0% | |
GATTTCGAGAGCGAAGACGG+AGG | + | chr8_3:59415595-59415614 | None:intergenic | 55.0% | |
CCGTGTTCAGTTCGAGACGT+TGG | - | chr8_3:59415653-59415672 | Msa1298570:three_prime_UTR | 55.0% | |
TTACGAGGAAGAGCAGGCCT+AGG | + | chr8_3:59415774-59415793 | None:intergenic | 55.0% | |
ATGCGGTTACGAGGAAGAGC+AGG | + | chr8_3:59415780-59415799 | None:intergenic | 55.0% | |
!! | CATGGGAAGGTGTTCGAGGT+TGG | - | chr8_3:59415862-59415881 | Msa1298570:CDS | 55.0% |
ACCCAACGCCCTTCTCTTGA+AGG | - | chr8_3:59416007-59416026 | Msa1298570:CDS | 55.0% | |
AGGACTCACGTCGTTGAGGA+TGG | - | chr8_3:59416355-59416374 | Msa1298570:CDS | 55.0% | |
GGACTCACGTCGTTGAGGAT+GGG | - | chr8_3:59416356-59416375 | Msa1298570:CDS | 55.0% | |
ATTGGAGTCCCACGTTGCTC+TGG | - | chr8_3:59416391-59416410 | Msa1298570:CDS | 55.0% | |
CAACCTAGACCAGAGCAACG+TGG | + | chr8_3:59416403-59416422 | None:intergenic | 55.0% | |
CTCAGCTGAGATATGGGCCA+AGG | - | chr8_3:59416847-59416866 | Msa1298570:intron | 55.0% | |
AGGTTTCAAGCTCGGGACCA+AGG | + | chr8_3:59417478-59417497 | None:intergenic | 55.0% | |
CCGCAGTTGACTAGCAGAGA+AGG | + | chr8_3:59417717-59417736 | None:intergenic | 55.0% | |
! | GGCGCTTTTGGCATTGCAAG+AGG | - | chr8_3:59418243-59418262 | Msa1298570:CDS | 55.0% |
CCAATCAGAACTCGGCCCTT+GGG | + | chr8_3:59418481-59418500 | None:intergenic | 55.0% | |
! | CCGAGTTCTGATTGGCTGCT+TGG | - | chr8_3:59418486-59418505 | Msa1298570:CDS | 55.0% |
! | CCAGAGCACTCGTTTGGATG+AGG | + | chr8_3:59419749-59419768 | None:intergenic | 55.0% |
CCTCATCCAAACGAGTGCTC+TGG | - | chr8_3:59419746-59419765 | Msa1298570:intron | 55.0% | |
CATCCAAACGAGTGCTCTGG+AGG | - | chr8_3:59419749-59419768 | Msa1298570:intron | 55.0% | |
! | TCACCTCCAGAGCACTCGTT+TGG | + | chr8_3:59419755-59419774 | None:intergenic | 55.0% |
!! | GCTCTGGAGGTGATCTTGAC+GGG | - | chr8_3:59419762-59419781 | Msa1298570:intron | 55.0% |
! | CTCTGGAGGTGATCTTGACG+GGG | - | chr8_3:59419763-59419782 | Msa1298570:intron | 55.0% |
GTTGGCTGAGCTGCATTCCA+TGG | - | chr8_3:59420228-59420247 | Msa1298570:intron | 55.0% | |
GACGCGAACGGTGGGTGTTT+CGG | + | chr8_3:59415505-59415524 | None:intergenic | 60.0% | |
! | GGTGGCGGTATGGGGTATGT+TGG | + | chr8_3:59415529-59415548 | None:intergenic | 60.0% |
GTCCCACGTTGCTCTGGTCT+AGG | - | chr8_3:59416397-59416416 | Msa1298570:CDS | 60.0% | |
! | CCCAAGGGCCGAGTTCTGAT+TGG | - | chr8_3:59418478-59418497 | Msa1298570:CDS | 60.0% |
GCCAATCAGAACTCGGCCCT+TGG | + | chr8_3:59418482-59418501 | None:intergenic | 60.0% | |
! | TCGTTGGCGGTGGCGGTATG+GGG | + | chr8_3:59415537-59415556 | None:intergenic | 65.0% |
! | GTCGTTGGCGGTGGCGGTAT+GGG | + | chr8_3:59415538-59415557 | None:intergenic | 65.0% |
GAGAAGGTCGTTGGCGGTGG+CGG | + | chr8_3:59415544-59415563 | None:intergenic | 65.0% | |
TCGGAGAAGGTCGTTGGCGG+TGG | + | chr8_3:59415547-59415566 | None:intergenic | 65.0% | |
AGCGGCCAACGGTGGTTTCG+AGG | + | chr8_3:59415572-59415591 | None:intergenic | 65.0% | |
GAAGACGGAGGAGCGGCCAA+CGG | + | chr8_3:59415583-59415602 | None:intergenic | 65.0% | |
CGAGAGCGAAGACGGAGGAG+CGG | + | chr8_3:59415590-59415609 | None:intergenic | 65.0% | |
!! | CGGAGGAAGCGTCGAGACAG+AGG | + | chr8_3:59415740-59415759 | None:intergenic | 65.0% |
! | GGTCGTTGGCGGTGGCGGTA+TGG | + | chr8_3:59415539-59415558 | None:intergenic | 70.0% |
GACGGAGGAGCGGCCAACGG+TGG | + | chr8_3:59415580-59415599 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_3 | gene | 59415423 | 59421131 | 59415423 | ID=Msa1298570;Name=Msa1298570 |
chr8_3 | mRNA | 59415423 | 59421131 | 59415423 | ID=Msa1298570-mRNA-1;Parent=Msa1298570;Name=Msa1298570-mRNA-1;_AED=0.05;_eAED=0.05;_QI=63|1|1|1|1|1|4|258|1123 |
chr8_3 | exon | 59415423 | 59416445 | 59415423 | ID=Msa1298570-mRNA-1:exon:17152;Parent=Msa1298570-mRNA-1 |
chr8_3 | exon | 59416659 | 59416809 | 59416659 | ID=Msa1298570-mRNA-1:exon:17151;Parent=Msa1298570-mRNA-1 |
chr8_3 | exon | 59417790 | 59419702 | 59417790 | ID=Msa1298570-mRNA-1:exon:17150;Parent=Msa1298570-mRNA-1 |
chr8_3 | exon | 59420526 | 59421131 | 59420526 | ID=Msa1298570-mRNA-1:exon:17149;Parent=Msa1298570-mRNA-1 |
chr8_3 | five_prime_UTR | 59421069 | 59421131 | 59421069 | ID=Msa1298570-mRNA-1:five_prime_utr;Parent=Msa1298570-mRNA-1 |
chr8_3 | CDS | 59420526 | 59421068 | 59420526 | ID=Msa1298570-mRNA-1:cds;Parent=Msa1298570-mRNA-1 |
chr8_3 | CDS | 59417790 | 59419702 | 59417790 | ID=Msa1298570-mRNA-1:cds;Parent=Msa1298570-mRNA-1 |
chr8_3 | CDS | 59416659 | 59416809 | 59416659 | ID=Msa1298570-mRNA-1:cds;Parent=Msa1298570-mRNA-1 |
chr8_3 | CDS | 59415681 | 59416445 | 59415681 | ID=Msa1298570-mRNA-1:cds;Parent=Msa1298570-mRNA-1 |
chr8_3 | three_prime_UTR | 59415423 | 59415680 | 59415423 | ID=Msa1298570-mRNA-1:three_prime_utr;Parent=Msa1298570-mRNA-1 |
Gene Sequence |
Protein sequence |