Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1261860 | XP_003609401.1 | 93.352 | 361 | 14 | 2 | 1 | 351 | 1 | 361 | 0.0 | 687 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1261860 | sp|Q9ZRF1|MTDH_FRAAN | 76.124 | 356 | 75 | 2 | 6 | 351 | 4 | 359 | 0.0 | 531 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1261860 | G7JFC2 | 93.352 | 361 | 14 | 2 | 1 | 351 | 1 | 361 | 0.0 | 687 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0046680 | Msa1261860 | -0.820920 | 5.315263e-53 | -8.615850e-47 |
| Msa1261860 | Msa1301030 | 0.996037 | 1.138603e-222 | -8.615850e-47 |
| Msa1261860 | Msa1327400 | 0.807729 | 4.384875e-50 | -8.615850e-47 |
| Msa1261860 | Msa1327420 | 0.806331 | 8.666305e-50 | -8.615850e-47 |
| Msa1261860 | Msa1419210 | -0.802001 | 6.900451e-49 | -8.615850e-47 |
| Msa0466850 | Msa1261860 | -0.821903 | 3.152163e-53 | -8.615850e-47 |
| Msa1192790 | Msa1261860 | 0.804306 | 2.300984e-49 | -8.615850e-47 |
| Msa0513670 | Msa1261860 | -0.820941 | 5.254950e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1261860 | MtrunA17_Chr4g0064291 | 93.352 | 361 | 14 | 2 | 1 | 351 | 1 | 361 | 0.0 | 687 |
| Msa1261860 | MtrunA17_Chr5g0411821 | 81.163 | 361 | 58 | 2 | 1 | 351 | 1 | 361 | 0.0 | 590 |
| Msa1261860 | MtrunA17_Chr5g0411841 | 80.055 | 361 | 62 | 2 | 1 | 351 | 1 | 361 | 0.0 | 573 |
| Msa1261860 | MtrunA17_Chr5g0411901 | 80.508 | 354 | 59 | 2 | 7 | 350 | 8 | 361 | 0.0 | 568 |
| Msa1261860 | MtrunA17_Chr5g0411811 | 80.609 | 361 | 60 | 2 | 1 | 351 | 1 | 361 | 0.0 | 567 |
| Msa1261860 | MtrunA17_Chr5g0411881 | 79.096 | 354 | 64 | 2 | 7 | 350 | 8 | 361 | 0.0 | 560 |
| Msa1261860 | MtrunA17_Chr5g0411931 | 78.116 | 361 | 69 | 2 | 1 | 351 | 1 | 361 | 0.0 | 555 |
| Msa1261860 | MtrunA17_Chr5g0411871 | 77.401 | 354 | 70 | 2 | 8 | 351 | 23 | 376 | 0.0 | 553 |
| Msa1261860 | MtrunA17_Chr5g0411911 | 76.353 | 351 | 73 | 2 | 10 | 350 | 12 | 362 | 0.0 | 539 |
| Msa1261860 | MtrunA17_Chr5g0411801 | 73.961 | 361 | 84 | 2 | 1 | 351 | 33 | 393 | 0.0 | 534 |
| Msa1261860 | MtrunA17_Chr8g0367151 | 75.556 | 360 | 78 | 2 | 1 | 350 | 1 | 360 | 0.0 | 516 |
| Msa1261860 | MtrunA17_Chr5g0411791 | 75.380 | 329 | 71 | 2 | 33 | 351 | 7 | 335 | 4.03e-164 | 461 |
| Msa1261860 | MtrunA17_Chr8g0383721 | 62.745 | 357 | 122 | 3 | 1 | 347 | 1 | 356 | 4.78e-150 | 427 |
| Msa1261860 | MtrunA17_Chr5g0411941 | 62.029 | 345 | 121 | 2 | 14 | 348 | 14 | 358 | 6.49e-141 | 404 |
| Msa1261860 | MtrunA17_Chr1g0157021 | 56.034 | 348 | 142 | 3 | 9 | 345 | 8 | 355 | 2.72e-124 | 361 |
| Msa1261860 | MtrunA17_Chr1g0208031 | 50.425 | 353 | 163 | 3 | 1 | 343 | 1 | 351 | 1.97e-113 | 333 |
| Msa1261860 | MtrunA17_Chr2g0279791 | 52.312 | 346 | 153 | 3 | 14 | 348 | 62 | 406 | 3.68e-110 | 327 |
| Msa1261860 | MtrunA17_Chr2g0279801 | 50.481 | 208 | 87 | 4 | 145 | 348 | 19 | 214 | 2.59e-52 | 172 |
| Msa1261860 | MtrunA17_Chr5g0411851 | 80.282 | 71 | 14 | 0 | 1 | 71 | 1 | 71 | 3.37e-38 | 132 |
| Msa1261860 | MtrunA17_Chr5g0411861 | 82.812 | 64 | 11 | 0 | 287 | 350 | 1 | 64 | 1.47e-30 | 110 |
| Msa1261860 | MtrunA17_Chr8g0385221 | 26.061 | 330 | 204 | 9 | 10 | 302 | 51 | 377 | 2.32e-21 | 94.4 |
| Msa1261860 | MtrunA17_Chr4g0021211 | 26.733 | 303 | 186 | 11 | 38 | 308 | 60 | 358 | 9.07e-18 | 84.0 |
| Msa1261860 | MtrunA17_Chr3g0125961 | 24.207 | 347 | 218 | 11 | 39 | 344 | 37 | 379 | 8.76e-16 | 77.8 |
| Msa1261860 | MtrunA17_Chr3g0125911 | 23.810 | 336 | 214 | 9 | 39 | 334 | 37 | 370 | 2.66e-15 | 76.3 |
| Msa1261860 | MtrunA17_Chr3g0125941 | 23.512 | 336 | 215 | 9 | 39 | 334 | 38 | 371 | 2.95e-14 | 73.2 |
| Msa1261860 | MtrunA17_Chr7g0242291 | 26.686 | 341 | 196 | 15 | 39 | 331 | 48 | 382 | 1.79e-13 | 70.9 |
| Msa1261860 | MtrunA17_Chr7g0262421 | 26.959 | 319 | 184 | 13 | 39 | 317 | 38 | 347 | 1.90e-12 | 67.8 |
| Msa1261860 | MtrunA17_Chr1g0183131 | 27.119 | 295 | 175 | 11 | 39 | 297 | 36 | 326 | 7.06e-12 | 65.9 |
| Msa1261860 | MtrunA17_Chr3g0132351 | 27.974 | 311 | 180 | 13 | 39 | 309 | 44 | 350 | 9.51e-12 | 65.9 |
| Msa1261860 | MtrunA17_Chr3g0118441 | 25.676 | 296 | 182 | 10 | 38 | 297 | 40 | 333 | 5.91e-11 | 63.2 |
| Msa1261860 | MtrunA17_Chr5g0419681 | 23.867 | 331 | 207 | 12 | 38 | 328 | 35 | 360 | 6.33e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1261860 | AT4G37980.1 | 68.966 | 348 | 98 | 2 | 13 | 350 | 9 | 356 | 8.11e-162 | 457 |
| Msa1261860 | AT4G37990.1 | 68.678 | 348 | 99 | 2 | 13 | 350 | 9 | 356 | 4.92e-158 | 447 |
| Msa1261860 | AT4G37970.1 | 61.127 | 355 | 128 | 2 | 6 | 350 | 7 | 361 | 4.66e-155 | 440 |
| Msa1261860 | AT4G39330.1 | 60.167 | 359 | 133 | 2 | 1 | 349 | 1 | 359 | 1.43e-153 | 436 |
| Msa1261860 | AT2G21730.1 | 59.773 | 353 | 130 | 4 | 11 | 351 | 5 | 357 | 2.76e-144 | 413 |
| Msa1261860 | AT2G21890.1 | 59.943 | 352 | 130 | 3 | 11 | 351 | 5 | 356 | 4.41e-144 | 412 |
| Msa1261860 | AT4G37980.2 | 68.421 | 285 | 80 | 2 | 13 | 287 | 9 | 293 | 7.34e-124 | 358 |
| Msa1261860 | AT4G39330.2 | 59.136 | 301 | 113 | 2 | 1 | 291 | 1 | 301 | 1.84e-120 | 350 |
| Msa1261860 | AT4G37970.4 | 58.904 | 292 | 110 | 2 | 6 | 287 | 7 | 298 | 3.39e-117 | 341 |
| Msa1261860 | AT1G72680.1 | 51.149 | 348 | 159 | 3 | 11 | 348 | 9 | 355 | 2.21e-111 | 328 |
| Msa1261860 | AT3G19450.1 | 49.709 | 344 | 163 | 2 | 13 | 346 | 11 | 354 | 6.56e-103 | 307 |
| Msa1261860 | AT4G34230.1 | 51.917 | 339 | 153 | 2 | 15 | 343 | 12 | 350 | 1.48e-98 | 296 |
| Msa1261860 | AT4G34230.2 | 51.622 | 339 | 154 | 2 | 15 | 343 | 12 | 350 | 1.18e-97 | 294 |
| Msa1261860 | AT4G37970.3 | 58.159 | 239 | 90 | 2 | 6 | 234 | 7 | 245 | 2.96e-91 | 274 |
| Msa1261860 | AT4G37970.2 | 58.228 | 237 | 89 | 2 | 6 | 232 | 7 | 243 | 8.50e-91 | 273 |
| Msa1261860 | AT5G63620.1 | 28.826 | 281 | 158 | 11 | 25 | 268 | 70 | 345 | 9.27e-23 | 99.0 |
| Msa1261860 | AT5G63620.2 | 28.826 | 281 | 158 | 11 | 25 | 268 | 70 | 345 | 1.12e-22 | 98.6 |
| Msa1261860 | AT5G63620.3 | 29.583 | 240 | 132 | 10 | 25 | 232 | 70 | 304 | 6.88e-22 | 95.1 |
| Msa1261860 | AT1G22430.2 | 29.043 | 303 | 172 | 12 | 39 | 302 | 42 | 340 | 3.24e-18 | 85.5 |
| Msa1261860 | AT1G22430.1 | 29.043 | 303 | 172 | 12 | 39 | 302 | 42 | 340 | 3.24e-18 | 85.5 |
| Msa1261860 | AT1G64710.2 | 28.956 | 297 | 170 | 13 | 39 | 297 | 13 | 306 | 1.27e-17 | 83.6 |
| Msa1261860 | AT1G64710.1 | 28.956 | 297 | 170 | 13 | 39 | 297 | 36 | 329 | 1.73e-17 | 83.2 |
| Msa1261860 | AT1G32780.1 | 28.142 | 366 | 198 | 16 | 39 | 348 | 37 | 393 | 5.14e-16 | 79.0 |
| Msa1261860 | AT5G43940.1 | 27.027 | 296 | 174 | 10 | 39 | 297 | 36 | 326 | 7.40e-16 | 78.6 |
| Msa1261860 | AT5G43940.2 | 27.027 | 296 | 174 | 10 | 39 | 297 | 48 | 338 | 9.28e-16 | 78.2 |
| Msa1261860 | AT1G77120.1 | 22.701 | 348 | 228 | 10 | 36 | 344 | 33 | 378 | 6.76e-14 | 72.4 |
| Msa1261860 | AT1G22430.3 | 30.348 | 201 | 109 | 7 | 39 | 211 | 42 | 239 | 1.16e-13 | 71.2 |
| Msa1261860 | AT1G22430.4 | 30.348 | 201 | 109 | 7 | 39 | 211 | 42 | 239 | 1.28e-13 | 70.9 |
| Msa1261860 | AT1G22430.5 | 30.348 | 201 | 109 | 7 | 39 | 211 | 42 | 239 | 1.28e-13 | 70.9 |
| Msa1261860 | AT1G22440.1 | 27.687 | 307 | 171 | 14 | 39 | 302 | 40 | 338 | 2.63e-13 | 70.9 |
Find 110 sgRNAs with CRISPR-Local
Find 155 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATAGCCCTCTTCGATATTT+TGG | 0.136323 | 8_2:-64260192 | Msa1261860:CDS |
| CCCCGTCTTTACTTTACTTT+CGG | 0.214131 | 8_2:-64259762 | Msa1261860:CDS |
| CCCGTCTTTACTTTACTTTC+GGG | 0.233045 | 8_2:-64259761 | Msa1261860:intron |
| GTTAAGTTTGCTAAAGCTTT+TGG | 0.264666 | 8_2:-64260108 | Msa1261860:CDS |
| CATCCTCTCTCACCTCTAAT+TGG | 0.269489 | 8_2:-64259845 | Msa1261860:CDS |
| TATGTTGCTGAACTCTAATA+TGG | 0.307246 | 8_2:-64259243 | Msa1261860:three_prime_UTR |
| ATAGTAGCTGGAAGTAATAT+TGG | 0.310483 | 8_2:-64259505 | Msa1261860:CDS |
| TGTTCTTGTATTGAAGTATT+TGG | 0.322347 | 8_2:+64261434 | None:intergenic |
| TTTATACTTGCATCTTATCT+TGG | 0.330447 | 8_2:+64259995 | None:intergenic |
| AAAGTAGAAAAGTTTAAAGT+TGG | 0.357138 | 8_2:-64260456 | Msa1261860:CDS |
| TGAATTCAATAACTTAGTTA+TGG | 0.372844 | 8_2:-64259045 | Msa1261860:three_prime_UTR |
| TGCTTTCGAGGGATCAGAAT+GGG | 0.373644 | 8_2:-64259203 | Msa1261860:three_prime_UTR |
| TCCACCTATCCACTAGTTCC+TGG | 0.377216 | 8_2:-64260614 | Msa1261860:CDS |
| GTTGTTGGTCTTGGTGGACT+TGG | 0.377317 | 8_2:-64260141 | Msa1261860:CDS |
| GCCCAACCAAAGGCCACATT+TGG | 0.377376 | 8_2:+64261226 | None:intergenic |
| ACATTTGGATGCTCAAATTC+AGG | 0.378005 | 8_2:+64261241 | None:intergenic |
| ATTTGATGAAATAAATGTTT+TGG | 0.378457 | 8_2:-64259277 | Msa1261860:three_prime_UTR |
| CAAGAGTTTCAAGAGGAAAT+CGG | 0.380665 | 8_2:-64259158 | Msa1261860:three_prime_UTR |
| AAAGGAAGCAAGAGAACTCT+TGG | 0.393117 | 8_2:-64260046 | Msa1261860:CDS |
| GACTTCAGTAATCCAATTAG+AGG | 0.398578 | 8_2:+64259833 | None:intergenic |
| TCCAAATGTGGCCTTTGGTT+GGG | 0.404435 | 8_2:-64261227 | Msa1261860:CDS |
| ATAGGTGTTGTTGGTCTTGG+TGG | 0.406919 | 8_2:-64260147 | Msa1261860:CDS |
| TTGTGTAGAATTTAAGAGCT+TGG | 0.407998 | 8_2:+64259319 | None:intergenic |
| CATATAGGTGTTGTTGGTCT+TGG | 0.413940 | 8_2:-64260150 | Msa1261860:CDS |
| CCCCTTTCAATTTCTCCAGA+AGG | 0.415467 | 8_2:-64261177 | Msa1261860:intron |
| AAGTTATTGAATTCAAGTTC+CGG | 0.423183 | 8_2:+64259053 | None:intergenic |
| GGTAGGCTTTACATTGTGTT+TGG | 0.423737 | 8_2:+64259444 | None:intergenic |
| TCCACATGATTAAGAATGAA+TGG | 0.429006 | 8_2:-64260643 | Msa1261860:CDS |
| AAAATTAAACTTGGGTTCTC+CGG | 0.430013 | 8_2:-64259072 | Msa1261860:three_prime_UTR |
| ATGCACAACCTCTGCTTTCG+AGG | 0.432734 | 8_2:-64259215 | Msa1261860:three_prime_UTR |
| GGTCTTGATAATTTGAAGTT+CGG | 0.435438 | 8_2:-64259136 | Msa1261860:three_prime_UTR |
| ACAAATGTGACATTTAATCT+TGG | 0.437101 | 8_2:+64258991 | None:intergenic |
| TCTTGGTGGACTTGGTCACA+TGG | 0.440795 | 8_2:-64260133 | Msa1261860:CDS |
| GAGCATCCAAATGTGGCCTT+TGG | 0.445115 | 8_2:-64261232 | Msa1261860:CDS |
| CCACATGATTAAGAATGAAT+GGG | 0.451390 | 8_2:-64260642 | Msa1261860:CDS |
| GGGAGCTCGAGAGGCTTCGC+TGG | 0.455382 | 8_2:+64259782 | None:intergenic |
| TATCGATTTGTGATTGACAT+TGG | 0.459329 | 8_2:-64259355 | Msa1261860:CDS |
| GGTATGCATATAGGTGTTGT+TGG | 0.468283 | 8_2:-64260156 | Msa1261860:CDS |
| AAGTAATATTGGAGGGATGA+AGG | 0.472105 | 8_2:-64259494 | Msa1261860:CDS |
| ATCCAAATGTGGCCTTTGGT+TGG | 0.472346 | 8_2:-64261228 | Msa1261860:CDS |
| GGTTGTAGACGAGCACTTTG+TGG | 0.479305 | 8_2:-64260280 | Msa1261860:CDS |
| AAGAGTTTCAAGAGGAAATC+GGG | 0.481161 | 8_2:-64259157 | Msa1261860:three_prime_UTR |
| GCTTCAAGTGGTAAACCATC+AGG | 0.481602 | 8_2:+64260249 | None:intergenic |
| ACCTTCTGGAGAAATTGAAA+GGG | 0.484740 | 8_2:+64261176 | None:intergenic |
| GCAGGGAGAAAGATAGTAGC+TGG | 0.485268 | 8_2:-64259517 | Msa1261860:intron |
| TACATCACCTAACAAAGAAA+AGG | 0.487305 | 8_2:-64260064 | Msa1261860:CDS |
| AAATACAGACATGAGATTGT+TGG | 0.489466 | 8_2:-64260501 | Msa1261860:intron |
| TACCATTGAAGTCATCCCTA+TGG | 0.491456 | 8_2:-64259425 | Msa1261860:CDS |
| AACCTTCTGGAGAAATTGAA+AGG | 0.496825 | 8_2:+64261175 | None:intergenic |
| GCTGCTCCTCTTCTTTGTGC+CGG | 0.498942 | 8_2:-64260225 | Msa1261860:intron |
| TTTGTGGTTCGCATTCCTGA+TGG | 0.505708 | 8_2:-64260264 | Msa1261860:CDS |
| CCCGAAAGTAAAGTAAAGAC+GGG | 0.510473 | 8_2:+64259761 | None:intergenic |
| GACAAGCCTGGTATGCATAT+AGG | 0.511811 | 8_2:-64260165 | Msa1261860:CDS |
| TGCACAACCTCTGCTTTCGA+GGG | 0.524378 | 8_2:-64259214 | Msa1261860:three_prime_UTR |
| CGCTTTACAGCCACGTGCGG+TGG | 0.529005 | 8_2:-64260351 | Msa1261860:intron |
| GTTTAAAGTTGGAGACAAAG+TGG | 0.533040 | 8_2:-64260445 | Msa1261860:CDS |
| CGTGATGACACCACCACATA+CGG | 0.535685 | 8_2:-64260321 | Msa1261860:CDS |
| GTTGGAGACAAAGTGGGTGT+TGG | 0.538424 | 8_2:-64260438 | Msa1261860:CDS |
| CTGCTTTCGAGGGATCAGAA+TGG | 0.539953 | 8_2:-64259204 | Msa1261860:three_prime_UTR |
| TTTAAAGTTGGAGACAAAGT+GGG | 0.540239 | 8_2:-64260444 | Msa1261860:CDS |
| GTCTCTTGCTGCCCAACCAA+AGG | 0.541338 | 8_2:+64261216 | None:intergenic |
| ATCCATAGGGATGACTTCAA+TGG | 0.541653 | 8_2:+64259423 | None:intergenic |
| GGACTCTAGTAATCGAAGTT+CGG | 0.542180 | 8_2:+64258829 | None:intergenic |
| ATTGGATTACTGAAGTCTCA+TGG | 0.542612 | 8_2:-64259827 | Msa1261860:CDS |
| TGTTGGTATAGTGACAAAAG+TGG | 0.544306 | 8_2:-64260484 | Msa1261860:CDS |
| GCAGTGTTCACATAATCCAT+AGG | 0.547554 | 8_2:+64259409 | None:intergenic |
| AAGGAAGCAAGAGAACTCTT+GGG | 0.547722 | 8_2:-64260045 | Msa1261860:CDS |
| CAGTGTTCACATAATCCATA+GGG | 0.548716 | 8_2:+64259410 | None:intergenic |
| CCACCTATCCACTAGTTCCT+GGG | 0.558391 | 8_2:-64260613 | Msa1261860:intron |
| CCCAGGAACTAGTGGATAGG+TGG | 0.565658 | 8_2:+64260613 | None:intergenic |
| CGGAGGTTACTCTGACTCAA+TGG | 0.566334 | 8_2:-64260301 | Msa1261860:CDS |
| ACCCGAAAGTAAAGTAAAGA+CGG | 0.569687 | 8_2:+64259760 | None:intergenic |
| CCCATTCATTCTTAATCATG+TGG | 0.570774 | 8_2:+64260642 | None:intergenic |
| TGGGCAGCAAGAGACCAATC+TGG | 0.572795 | 8_2:-64261208 | Msa1261860:CDS |
| GTTGGTATAGTGACAAAAGT+GGG | 0.575434 | 8_2:-64260483 | Msa1261860:CDS |
| ACGATATTTGCCACCGCACG+TGG | 0.576286 | 8_2:+64260341 | None:intergenic |
| GTAAAGACGGGGAGCTCGAG+AGG | 0.576499 | 8_2:+64259773 | None:intergenic |
| CGTTATACAAGAGTTTCAAG+AGG | 0.583925 | 8_2:-64259165 | Msa1261860:three_prime_UTR |
| GTCTCATGGAAAACTTGTAA+TGG | 0.588488 | 8_2:-64259813 | Msa1261860:CDS |
| TTTGTGTGCGATAGTTGTGT+TGG | 0.589082 | 8_2:-64258973 | Msa1261860:three_prime_UTR |
| GTAGCTGGAAGTAATATTGG+AGG | 0.593394 | 8_2:-64259502 | Msa1261860:CDS |
| AAGGGGAGAGAAGACCAGAT+TGG | 0.593974 | 8_2:+64261194 | None:intergenic |
| AAAGCATACCCAGGAACTAG+TGG | 0.598271 | 8_2:+64260605 | None:intergenic |
| AATCCAATTAGAGGTGAGAG+AGG | 0.598290 | 8_2:+64259842 | None:intergenic |
| CTATATCACACACATATATG+TGG | 0.600199 | 8_2:+64261351 | None:intergenic |
| ATAGGGATGACTTCAATGGT+AGG | 0.600678 | 8_2:+64259427 | None:intergenic |
| TATGTGGTGTGGAAGCTACA+TGG | 0.600858 | 8_2:+64261367 | None:intergenic |
| GTCAGAGTAACCTCCGTATG+TGG | 0.602930 | 8_2:+64260308 | None:intergenic |
| ACAACACCTATATGCATACC+AGG | 0.605327 | 8_2:+64260159 | None:intergenic |
| CATGGAAAACTTGTAATGGT+TGG | 0.608863 | 8_2:-64259809 | Msa1261860:CDS |
| GCTTCAATGGATACATTAGA+CGG | 0.612870 | 8_2:-64259893 | Msa1261860:CDS |
| GGATTATGTGAACACTGCAA+TGG | 0.614440 | 8_2:-64259404 | Msa1261860:CDS |
| CGAGTCCAAAATATCGAAGA+GGG | 0.615637 | 8_2:+64260187 | None:intergenic |
| TAGCTGGAAGTAATATTGGA+GGG | 0.622888 | 8_2:-64259501 | Msa1261860:CDS |
| GTGATACCGGCACAAAGAAG+AGG | 0.629010 | 8_2:+64260219 | None:intergenic |
| ATACCCAGGAACTAGTGGAT+AGG | 0.629537 | 8_2:+64260610 | None:intergenic |
| TGAATTTGAGCATCCAAATG+TGG | 0.630535 | 8_2:-64261239 | Msa1261860:CDS |
| TCACACACATATATGTGGTG+TGG | 0.632515 | 8_2:+64261356 | None:intergenic |
| TTCTGATCCCTCGAAAGCAG+AGG | 0.636348 | 8_2:+64259207 | None:intergenic |
| TATCATTGACACAGTTTCAG+CGG | 0.641419 | 8_2:-64259870 | Msa1261860:CDS |
| CACATGATTAAGAATGAATG+GGG | 0.641925 | 8_2:-64260641 | Msa1261860:CDS |
| AGAGGAGCAGCAGCTTCAAG+TGG | 0.642094 | 8_2:+64260237 | None:intergenic |
| CCTCGCTTTACAGCCACGTG+CGG | 0.648002 | 8_2:-64260354 | Msa1261860:intron |
| CCTTCTGGAGAAATTGAAAG+GGG | 0.653235 | 8_2:+64261177 | None:intergenic |
| GCTCACTACACTACAACACA+TGG | 0.655303 | 8_2:-64261406 | Msa1261860:five_prime_UTR |
| AGAGTAACCTCCGTATGTGG+TGG | 0.659164 | 8_2:+64260311 | None:intergenic |
| ATGTGGTGTGGAAGCTACAT+GGG | 0.659553 | 8_2:+64261368 | None:intergenic |
| TCGAGTCCAAAATATCGAAG+AGG | 0.670879 | 8_2:+64260186 | None:intergenic |
| CCGAAAGTAAAGTAAAGACG+GGG | 0.692920 | 8_2:+64259762 | None:intergenic |
| GATGACACCACCACATACGG+AGG | 0.719955 | 8_2:-64260318 | Msa1261860:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACTATGTTAATAATTTTAT+AGG | - | chr8_2:64260351-64260370 | Msa1261860:intron | 10.0% |
| !!! | AAGAACATATATTTTATTTA+TGG | - | chr8_2:64261376-64261395 | Msa1261860:five_prime_UTR | 10.0% |
| !! | AAATAAATATAGAAATGAAG+AGG | + | chr8_2:64259127-64259146 | None:intergenic | 15.0% |
| !! | CAAAAAATGTATTTATTAAG+TGG | + | chr8_2:64259199-64259218 | None:intergenic | 15.0% |
| !!! | TATTTAATCTTTTCCTTTTT+TGG | + | chr8_2:64259243-64259262 | None:intergenic | 15.0% |
| !! | AAAAGATTAAATACAGTTAT+CGG | - | chr8_2:64259250-64259269 | Msa1261860:three_prime_UTR | 15.0% |
| !! | TTAGAATCAAAATAAAGTAA+TGG | + | chr8_2:64259735-64259754 | None:intergenic | 15.0% |
| !! | ACATTCTAATATTCTTAAAT+TGG | - | chr8_2:64260306-64260325 | Msa1261860:CDS | 15.0% |
| !! | TAATATTCTTAAATTGGAAA+TGG | - | chr8_2:64260312-64260331 | Msa1261860:CDS | 15.0% |
| !! | TTTCTTATATATACAATTGA+AGG | - | chr8_2:64260589-64260608 | Msa1261860:intron | 15.0% |
| !!! | AAATATATGCATTTTGTTAT+TGG | + | chr8_2:64260658-64260677 | None:intergenic | 15.0% |
| !!! | ATTTGATGAAATAAATGTTT+TGG | - | chr8_2:64260989-64261008 | Msa1261860:intron | 15.0% |
| !!! | TCATTCAAAATATTGTTTTG+TGG | - | chr8_2:64259583-64259602 | Msa1261860:intron | 20.0% |
| !!! | TAAGACAATTTCTAAGATAA+TGG | + | chr8_2:64259705-64259724 | None:intergenic | 20.0% |
| !!! | AAAGTAGAAAAGTTTAAAGT+TGG | - | chr8_2:64259810-64259829 | Msa1261860:CDS | 20.0% |
| !!! | AATAATTTTATAGGCTTCAA+TGG | - | chr8_2:64260360-64260379 | Msa1261860:intron | 20.0% |
| !! | TGAATTCAATAACTTAGTTA+TGG | - | chr8_2:64261221-64261240 | Msa1261860:CDS | 20.0% |
| !! | TGTTCTTGTATTGAAGTATT+TGG | + | chr8_2:64258835-64258854 | None:intergenic | 25.0% |
| !!! | ATTTTAATTAAAGCATACCC+AGG | + | chr8_2:64259673-64259692 | None:intergenic | 25.0% |
| ! | TTTATACTTGCATCTTATCT+TGG | + | chr8_2:64260274-64260293 | None:intergenic | 25.0% |
| ! | CAAATCAAACAAGAGATTTA+TGG | + | chr8_2:64260633-64260652 | None:intergenic | 25.0% |
| ! | TTTCACCCAAAAATTAAACT+TGG | - | chr8_2:64261185-64261204 | Msa1261860:CDS | 25.0% |
| ! | TTCACCCAAAAATTAAACTT+GGG | - | chr8_2:64261186-64261205 | Msa1261860:CDS | 25.0% |
| !!! | AGAACCCAAGTTTAATTTTT+GGG | + | chr8_2:64261193-64261212 | None:intergenic | 25.0% |
| !! | AAGTTATTGAATTCAAGTTC+CGG | + | chr8_2:64261216-64261235 | None:intergenic | 25.0% |
| ! | ACAAATGTGACATTTAATCT+TGG | + | chr8_2:64261278-64261297 | None:intergenic | 25.0% |
| CTATATCACACACATATATG+TGG | + | chr8_2:64258918-64258937 | None:intergenic | 30.0% | |
| ! | ATTTTTCGTCACAGTTGAAA+TGG | - | chr8_2:64258994-64259013 | Msa1261860:three_prime_UTR | 30.0% |
| ! | TTTTTCGTCACAGTTGAAAT+GGG | - | chr8_2:64258995-64259014 | Msa1261860:three_prime_UTR | 30.0% |
| !!! | TAATCTTTTCCTTTTTTGGC+TGG | + | chr8_2:64259239-64259258 | None:intergenic | 30.0% |
| AACGCAAGAACATTAAAATG+AGG | + | chr8_2:64259432-64259451 | None:intergenic | 30.0% | |
| TTAATGTTCTTGCGTTAGAT+CGG | - | chr8_2:64259436-64259455 | Msa1261860:CDS | 30.0% | |
| TCCACATGATTAAGAATGAA+TGG | - | chr8_2:64259623-64259642 | Msa1261860:intron | 30.0% | |
| CCACATGATTAAGAATGAAT+GGG | - | chr8_2:64259624-64259643 | Msa1261860:intron | 30.0% | |
| CACATGATTAAGAATGAATG+GGG | - | chr8_2:64259625-64259644 | Msa1261860:intron | 30.0% | |
| AAATACAGACATGAGATTGT+TGG | - | chr8_2:64259765-64259784 | Msa1261860:CDS | 30.0% | |
| ! | TTTAAAGTTGGAGACAAAGT+GGG | - | chr8_2:64259822-64259841 | Msa1261860:CDS | 30.0% |
| !!! | GTTAAGTTTGCTAAAGCTTT+TGG | - | chr8_2:64260158-64260177 | Msa1261860:CDS | 30.0% |
| TACATCACCTAACAAAGAAA+AGG | - | chr8_2:64260202-64260221 | Msa1261860:intron | 30.0% | |
| ATAGTAGCTGGAAGTAATAT+TGG | - | chr8_2:64260761-64260780 | Msa1261860:intron | 30.0% | |
| !! | TATCGATTTGTGATTGACAT+TGG | - | chr8_2:64260911-64260930 | Msa1261860:intron | 30.0% |
| TTGTGTAGAATTTAAGAGCT+TGG | + | chr8_2:64260950-64260969 | None:intergenic | 30.0% | |
| TATGTTGCTGAACTCTAATA+TGG | - | chr8_2:64261023-64261042 | Msa1261860:intron | 30.0% | |
| ! | GGTCTTGATAATTTGAAGTT+CGG | - | chr8_2:64261130-64261149 | Msa1261860:intron | 30.0% |
| !! | GAGAACCCAAGTTTAATTTT+TGG | + | chr8_2:64261194-64261213 | None:intergenic | 30.0% |
| AAAATTAAACTTGGGTTCTC+CGG | - | chr8_2:64261194-64261213 | Msa1261860:CDS | 30.0% | |
| ACATTTGGATGCTCAAATTC+AGG | + | chr8_2:64259028-64259047 | None:intergenic | 35.0% | |
| TGAATTTGAGCATCCAAATG+TGG | - | chr8_2:64259027-64259046 | Msa1261860:three_prime_UTR | 35.0% | |
| ! | ACCTTCTGGAGAAATTGAAA+GGG | + | chr8_2:64259093-64259112 | None:intergenic | 35.0% |
| ! | AACCTTCTGGAGAAATTGAA+AGG | + | chr8_2:64259094-64259113 | None:intergenic | 35.0% |
| ATTTGTGTCTCCAAACTTTC+AGG | - | chr8_2:64259539-64259558 | Msa1261860:intron | 35.0% | |
| TTTGTGTCTCCAAACTTTCA+GGG | - | chr8_2:64259540-64259559 | Msa1261860:intron | 35.0% | |
| CATTTGTTTCCCTGAAAGTT+TGG | + | chr8_2:64259552-64259571 | None:intergenic | 35.0% | |
| CCCATTCATTCTTAATCATG+TGG | + | chr8_2:64259627-64259646 | None:intergenic | 35.0% | |
| TGTTGGTATAGTGACAAAAG+TGG | - | chr8_2:64259782-64259801 | Msa1261860:CDS | 35.0% | |
| GTTGGTATAGTGACAAAAGT+GGG | - | chr8_2:64259783-64259802 | Msa1261860:CDS | 35.0% | |
| ! | GTTTAAAGTTGGAGACAAAG+TGG | - | chr8_2:64259821-64259840 | Msa1261860:CDS | 35.0% |
| ! | TATAGCCCTCTTCGATATTT+TGG | - | chr8_2:64260074-64260093 | Msa1261860:CDS | 35.0% |
| ! | CTTGCTTCCTTTTCTTTGTT+AGG | + | chr8_2:64260212-64260231 | None:intergenic | 35.0% |
| GCTTCAATGGATACATTAGA+CGG | - | chr8_2:64260373-64260392 | Msa1261860:intron | 35.0% | |
| TATCATTGACACAGTTTCAG+CGG | - | chr8_2:64260396-64260415 | Msa1261860:CDS | 35.0% | |
| GACTTCAGTAATCCAATTAG+AGG | + | chr8_2:64260436-64260455 | None:intergenic | 35.0% | |
| ATTGGATTACTGAAGTCTCA+TGG | - | chr8_2:64260439-64260458 | Msa1261860:CDS | 35.0% | |
| GTCTCATGGAAAACTTGTAA+TGG | - | chr8_2:64260453-64260472 | Msa1261860:CDS | 35.0% | |
| CATGGAAAACTTGTAATGGT+TGG | - | chr8_2:64260457-64260476 | Msa1261860:CDS | 35.0% | |
| ACCCGAAAGTAAAGTAAAGA+CGG | + | chr8_2:64260509-64260528 | None:intergenic | 35.0% | |
| TAGCTAGCATATATTTCCTC+TGG | - | chr8_2:64260533-64260552 | Msa1261860:intron | 35.0% | |
| GTTCAAGTATATAAGACCAG+AGG | + | chr8_2:64260552-64260571 | None:intergenic | 35.0% | |
| ! | TGATGATGCTAGCATATTCA+TGG | - | chr8_2:64260727-64260746 | Msa1261860:intron | 35.0% |
| TAGCTGGAAGTAATATTGGA+GGG | - | chr8_2:64260765-64260784 | Msa1261860:intron | 35.0% | |
| AAGTAATATTGGAGGGATGA+AGG | - | chr8_2:64260772-64260791 | Msa1261860:intron | 35.0% | |
| CAGTGTTCACATAATCCATA+GGG | + | chr8_2:64260859-64260878 | None:intergenic | 35.0% | |
| CGTTATACAAGAGTTTCAAG+AGG | - | chr8_2:64261101-64261120 | Msa1261860:intron | 35.0% | |
| CAAGAGTTTCAAGAGGAAAT+CGG | - | chr8_2:64261108-64261127 | Msa1261860:intron | 35.0% | |
| AAGAGTTTCAAGAGGAAATC+GGG | - | chr8_2:64261109-64261128 | Msa1261860:intron | 35.0% | |
| TCACACACATATATGTGGTG+TGG | + | chr8_2:64258913-64258932 | None:intergenic | 40.0% | |
| ! | CCTTCTGGAGAAATTGAAAG+GGG | + | chr8_2:64259092-64259111 | None:intergenic | 40.0% |
| AGGTGAATGAATGAACCTTC+TGG | + | chr8_2:64259107-64259126 | None:intergenic | 40.0% | |
| TTTAAGCCTCCAGCCAAAAA+AGG | - | chr8_2:64259227-64259246 | Msa1261860:three_prime_UTR | 40.0% | |
| !!! | TCTTTTCCTTTTTTGGCTGG+AGG | + | chr8_2:64259236-64259255 | None:intergenic | 40.0% |
| CGAGTCCAAAATATCGAAGA+GGG | + | chr8_2:64260082-64260101 | None:intergenic | 40.0% | |
| TCGAGTCCAAAATATCGAAG+AGG | + | chr8_2:64260083-64260102 | None:intergenic | 40.0% | |
| ACAACACCTATATGCATACC+AGG | + | chr8_2:64260110-64260129 | None:intergenic | 40.0% | |
| ! | GGTATGCATATAGGTGTTGT+TGG | - | chr8_2:64260110-64260129 | Msa1261860:CDS | 40.0% |
| !! | CATATAGGTGTTGTTGGTCT+TGG | - | chr8_2:64260116-64260135 | Msa1261860:CDS | 40.0% |
| AAAGGAAGCAAGAGAACTCT+TGG | - | chr8_2:64260220-64260239 | Msa1261860:intron | 40.0% | |
| AAGGAAGCAAGAGAACTCTT+GGG | - | chr8_2:64260221-64260240 | Msa1261860:intron | 40.0% | |
| AATCCAATTAGAGGTGAGAG+AGG | + | chr8_2:64260427-64260446 | None:intergenic | 40.0% | |
| CCGAAAGTAAAGTAAAGACG+GGG | + | chr8_2:64260507-64260526 | None:intergenic | 40.0% | |
| CCCCGTCTTTACTTTACTTT+CGG | - | chr8_2:64260504-64260523 | Msa1261860:intron | 40.0% | |
| CCCGAAAGTAAAGTAAAGAC+GGG | + | chr8_2:64260508-64260527 | None:intergenic | 40.0% | |
| CCCGTCTTTACTTTACTTTC+GGG | - | chr8_2:64260505-64260524 | Msa1261860:intron | 40.0% | |
| ATGCTAGCATATTCATGGCA+GGG | - | chr8_2:64260732-64260751 | Msa1261860:intron | 40.0% | |
| GTAGCTGGAAGTAATATTGG+AGG | - | chr8_2:64260764-64260783 | Msa1261860:intron | 40.0% | |
| GGTAGGCTTTACATTGTGTT+TGG | + | chr8_2:64260825-64260844 | None:intergenic | 40.0% | |
| ATAGGGATGACTTCAATGGT+AGG | + | chr8_2:64260842-64260861 | None:intergenic | 40.0% | |
| TACCATTGAAGTCATCCCTA+TGG | - | chr8_2:64260841-64260860 | Msa1261860:intron | 40.0% | |
| ATCCATAGGGATGACTTCAA+TGG | + | chr8_2:64260846-64260865 | None:intergenic | 40.0% | |
| GCAGTGTTCACATAATCCAT+AGG | + | chr8_2:64260860-64260879 | None:intergenic | 40.0% | |
| GGATTATGTGAACACTGCAA+TGG | - | chr8_2:64260862-64260881 | Msa1261860:intron | 40.0% | |
| TTTGTGTGCGATAGTTGTGT+TGG | - | chr8_2:64261293-64261312 | Msa1261860:five_prime_UTR | 40.0% | |
| GGACTCTAGTAATCGAAGTT+CGG | + | chr8_2:64261440-64261459 | None:intergenic | 40.0% | |
| GCTCACTACACTACAACACA+TGG | - | chr8_2:64258860-64258879 | Msa1261860:three_prime_UTR | 45.0% | |
| ATGTGGTGTGGAAGCTACAT+GGG | + | chr8_2:64258901-64258920 | None:intergenic | 45.0% | |
| TATGTGGTGTGGAAGCTACA+TGG | + | chr8_2:64258902-64258921 | None:intergenic | 45.0% | |
| ATCCAAATGTGGCCTTTGGT+TGG | - | chr8_2:64259038-64259057 | Msa1261860:three_prime_UTR | 45.0% | |
| TCCAAATGTGGCCTTTGGTT+GGG | - | chr8_2:64259039-64259058 | Msa1261860:three_prime_UTR | 45.0% | |
| CCCCTTTCAATTTCTCCAGA+AGG | - | chr8_2:64259089-64259108 | Msa1261860:three_prime_UTR | 45.0% | |
| ACCCACAATCCAGTTCAACA+GGG | + | chr8_2:64259462-64259481 | None:intergenic | 45.0% | |
| TACCCACAATCCAGTTCAAC+AGG | + | chr8_2:64259463-64259482 | None:intergenic | 45.0% | |
| ! | ATACCCAGGAACTAGTGGAT+AGG | + | chr8_2:64259659-64259678 | None:intergenic | 45.0% |
| AAAGCATACCCAGGAACTAG+TGG | + | chr8_2:64259664-64259683 | None:intergenic | 45.0% | |
| TTTGTGGTTCGCATTCCTGA+TGG | - | chr8_2:64260002-64260021 | Msa1261860:CDS | 45.0% | |
| GCTTCAAGTGGTAAACCATC+AGG | + | chr8_2:64260020-64260039 | None:intergenic | 45.0% | |
| AGGGCTATACACTGTGATAC+CGG | + | chr8_2:64260063-64260082 | None:intergenic | 45.0% | |
| !! | TATTTTGGACTCGACAAGCC+TGG | - | chr8_2:64260089-64260108 | Msa1261860:CDS | 45.0% |
| GACAAGCCTGGTATGCATAT+AGG | - | chr8_2:64260101-64260120 | Msa1261860:CDS | 45.0% | |
| !! | ATAGGTGTTGTTGGTCTTGG+TGG | - | chr8_2:64260119-64260138 | Msa1261860:CDS | 45.0% |
| CATCCTCTCTCACCTCTAAT+TGG | - | chr8_2:64260421-64260440 | Msa1261860:CDS | 45.0% | |
| GATGCTAGCATATTCATGGC+AGG | - | chr8_2:64260731-64260750 | Msa1261860:intron | 45.0% | |
| TGCTTTCGAGGGATCAGAAT+GGG | - | chr8_2:64261063-64261082 | Msa1261860:intron | 45.0% | |
| GAGCATCCAAATGTGGCCTT+TGG | - | chr8_2:64259034-64259053 | Msa1261860:three_prime_UTR | 50.0% | |
| AAGGGGAGAGAAGACCAGAT+TGG | + | chr8_2:64259075-64259094 | None:intergenic | 50.0% | |
| TTAGATCGGCCCTGTTGAAC+TGG | - | chr8_2:64259450-64259469 | Msa1261860:CDS | 50.0% | |
| GCCCTGTTGAACTGGATTGT+GGG | - | chr8_2:64259458-64259477 | Msa1261860:CDS | 50.0% | |
| TCCACCTATCCACTAGTTCC+TGG | - | chr8_2:64259652-64259671 | Msa1261860:intron | 50.0% | |
| CCACCTATCCACTAGTTCCT+GGG | - | chr8_2:64259653-64259672 | Msa1261860:intron | 50.0% | |
| GTTGGAGACAAAGTGGGTGT+TGG | - | chr8_2:64259828-64259847 | Msa1261860:CDS | 50.0% | |
| CGTGATGACACCACCACATA+CGG | - | chr8_2:64259945-64259964 | Msa1261860:intron | 50.0% | |
| AGAGTAACCTCCGTATGTGG+TGG | + | chr8_2:64259958-64259977 | None:intergenic | 50.0% | |
| GTCAGAGTAACCTCCGTATG+TGG | + | chr8_2:64259961-64259980 | None:intergenic | 50.0% | |
| CGGAGGTTACTCTGACTCAA+TGG | - | chr8_2:64259965-64259984 | Msa1261860:intron | 50.0% | |
| GGTTGTAGACGAGCACTTTG+TGG | - | chr8_2:64259986-64260005 | Msa1261860:intron | 50.0% | |
| GTGATACCGGCACAAAGAAG+AGG | + | chr8_2:64260050-64260069 | None:intergenic | 50.0% | |
| !! | GTTGTTGGTCTTGGTGGACT+TGG | - | chr8_2:64260125-64260144 | Msa1261860:CDS | 50.0% |
| !! | TCTTGGTGGACTTGGTCACA+TGG | - | chr8_2:64260133-64260152 | Msa1261860:CDS | 50.0% |
| GCAGGGAGAAAGATAGTAGC+TGG | - | chr8_2:64260749-64260768 | Msa1261860:intron | 50.0% | |
| ATGCACAACCTCTGCTTTCG+AGG | - | chr8_2:64261051-64261070 | Msa1261860:intron | 50.0% | |
| TGCACAACCTCTGCTTTCGA+GGG | - | chr8_2:64261052-64261071 | Msa1261860:intron | 50.0% | |
| TTCTGATCCCTCGAAAGCAG+AGG | + | chr8_2:64261062-64261081 | None:intergenic | 50.0% | |
| CTGCTTTCGAGGGATCAGAA+TGG | - | chr8_2:64261062-64261081 | Msa1261860:intron | 50.0% | |
| GCCCAACCAAAGGCCACATT+TGG | + | chr8_2:64259043-64259062 | None:intergenic | 55.0% | |
| GTCTCTTGCTGCCCAACCAA+AGG | + | chr8_2:64259053-64259072 | None:intergenic | 55.0% | |
| TGGGCAGCAAGAGACCAATC+TGG | - | chr8_2:64259058-64259077 | Msa1261860:three_prime_UTR | 55.0% | |
| GGCCCTGTTGAACTGGATTG+TGG | - | chr8_2:64259457-64259476 | Msa1261860:CDS | 55.0% | |
| ! | CCCAGGAACTAGTGGATAGG+TGG | + | chr8_2:64259656-64259675 | None:intergenic | 55.0% |
| ACGATATTTGCCACCGCACG+TGG | + | chr8_2:64259928-64259947 | None:intergenic | 55.0% | |
| GATGACACCACCACATACGG+AGG | - | chr8_2:64259948-64259967 | Msa1261860:intron | 55.0% | |
| AGAGGAGCAGCAGCTTCAAG+TGG | + | chr8_2:64260032-64260051 | None:intergenic | 55.0% | |
| GCTGCTCCTCTTCTTTGTGC+CGG | - | chr8_2:64260041-64260060 | Msa1261860:CDS | 55.0% | |
| CCTCGCTTTACAGCCACGTG+CGG | - | chr8_2:64259912-64259931 | Msa1261860:intron | 60.0% | |
| GTAAAGACGGGGAGCTCGAG+AGG | + | chr8_2:64260496-64260515 | None:intergenic | 60.0% | |
| CCGCACGTGGCTGTAAAGCG+AGG | + | chr8_2:64259915-64259934 | None:intergenic | 65.0% | |
| CGCTTTACAGCCACGTGCGG+TGG | - | chr8_2:64259915-64259934 | Msa1261860:intron | 65.0% | |
| GGGAGCTCGAGAGGCTTCGC+TGG | + | chr8_2:64260487-64260506 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 64258825 | 64261463 | 64258825 | ID=Msa1261860;Name=Msa1261860 |
| chr8_2 | mRNA | 64258825 | 64261463 | 64258825 | ID=Msa1261860-mRNA-1;Parent=Msa1261860;Name=Msa1261860-mRNA-1;_AED=0.07;_eAED=0.07;_QI=188|0.66|0.57|1|0.5|0.42|7|505|351 |
| chr8_2 | exon | 64258825 | 64259535 | 64258825 | ID=Msa1261860-mRNA-1:exon:20807;Parent=Msa1261860-mRNA-1 |
| chr8_2 | exon | 64259762 | 64259915 | 64259762 | ID=Msa1261860-mRNA-1:exon:20806;Parent=Msa1261860-mRNA-1 |
| chr8_2 | exon | 64260002 | 64260216 | 64260002 | ID=Msa1261860-mRNA-1:exon:20805;Parent=Msa1261860-mRNA-1 |
| chr8_2 | exon | 64260226 | 64260363 | 64260226 | ID=Msa1261860-mRNA-1:exon:20804;Parent=Msa1261860-mRNA-1 |
| chr8_2 | exon | 64260385 | 64260515 | 64260385 | ID=Msa1261860-mRNA-1:exon:20803;Parent=Msa1261860-mRNA-1 |
| chr8_2 | exon | 64260614 | 64260727 | 64260614 | ID=Msa1261860-mRNA-1:exon:20802;Parent=Msa1261860-mRNA-1 |
| chr8_2 | exon | 64261178 | 64261463 | 64261178 | ID=Msa1261860-mRNA-1:exon:20801;Parent=Msa1261860-mRNA-1 |
| chr8_2 | five_prime_UTR | 64261276 | 64261463 | 64261276 | ID=Msa1261860-mRNA-1:five_prime_utr;Parent=Msa1261860-mRNA-1 |
| chr8_2 | CDS | 64261178 | 64261275 | 64261178 | ID=Msa1261860-mRNA-1:cds;Parent=Msa1261860-mRNA-1 |
| chr8_2 | CDS | 64260614 | 64260727 | 64260614 | ID=Msa1261860-mRNA-1:cds;Parent=Msa1261860-mRNA-1 |
| chr8_2 | CDS | 64260385 | 64260515 | 64260385 | ID=Msa1261860-mRNA-1:cds;Parent=Msa1261860-mRNA-1 |
| chr8_2 | CDS | 64260226 | 64260363 | 64260226 | ID=Msa1261860-mRNA-1:cds;Parent=Msa1261860-mRNA-1 |
| chr8_2 | CDS | 64260002 | 64260216 | 64260002 | ID=Msa1261860-mRNA-1:cds;Parent=Msa1261860-mRNA-1 |
| chr8_2 | CDS | 64259762 | 64259915 | 64259762 | ID=Msa1261860-mRNA-1:cds;Parent=Msa1261860-mRNA-1 |
| chr8_2 | CDS | 64259330 | 64259535 | 64259330 | ID=Msa1261860-mRNA-1:cds;Parent=Msa1261860-mRNA-1 |
| chr8_2 | three_prime_UTR | 64258825 | 64259329 | 64258825 | ID=Msa1261860-mRNA-1:three_prime_utr;Parent=Msa1261860-mRNA-1 |
| Gene Sequence |
| Protein sequence |
