Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016570 | Msa1263300 | 0.805682 | 1.186715e-49 | -8.615850e-47 |
| Msa0064970 | Msa1263300 | 0.801593 | 8.370592e-49 | -8.615850e-47 |
| Msa0110270 | Msa1263300 | 0.806019 | 1.008025e-49 | -8.615850e-47 |
| Msa0777790 | Msa1263300 | 0.803783 | 2.956757e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 7 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTATTCTCTTCTACAAAAT+TGG | 0.188745 | 8_2:+66430726 | None:intergenic |
| AGCATTCAAGAGCAATGCTT+TGG | 0.388884 | 8_2:+66431164 | None:intergenic |
| CCTGGTCAAAAGTGAAATGC+AGG | 0.454911 | 8_2:-66431137 | Msa1263300:intron |
| AAGCTCAATGATAATGCATA+TGG | 0.459992 | 8_2:-66432966 | None:intergenic |
| GCATTCAAGAGCAATGCTTT+GGG | 0.460182 | 8_2:+66431165 | None:intergenic |
| AGCTCTAATGGTACGTCCAA+TGG | 0.488711 | 8_2:-66430779 | Msa1263300:CDS |
| TAGATTCTTAAAGAAGGAGG+AGG | 0.510601 | 8_2:-66430813 | Msa1263300:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAAAATAGAATATTATGT+TGG | - | chr8_2:66431063-66431082 | Msa1263300:intron | 10.0% |
| !! | TAATATTATGAATTATTCAA+TGG | + | chr8_2:66431564-66431583 | None:intergenic | 10.0% |
| !!! | TTTAAAATAGAATATTATGT+TGG | - | chr8_2:66431063-66431082 | Msa1263300:intron | 10.0% |
| !! | TAATATTATGAATTATTCAA+TGG | + | chr8_2:66431564-66431583 | None:intergenic | 10.0% |
| !!! | TTAATTTTGTATTTTGGATA+AGG | - | chr8_2:66430924-66430943 | Msa1263300:intron | 15.0% |
| !!! | TGATTAATGATTAATTTGAT+TGG | + | chr8_2:66431240-66431259 | None:intergenic | 15.0% |
| !! | ATACAAATCTAAATTGATAT+AGG | - | chr8_2:66431532-66431551 | Msa1263300:intron | 15.0% |
| !!! | AACATTTAAGATTATTTGAA+TGG | - | chr8_2:66431867-66431886 | Msa1263300:intron | 15.0% |
| !!! | ACATTTAAGATTATTTGAAT+GGG | - | chr8_2:66431868-66431887 | Msa1263300:intron | 15.0% |
| !! | TGATGAGAAAATTATTTAAA+AGG | + | chr8_2:66431941-66431960 | None:intergenic | 15.0% |
| !!! | AATAAAACATGCATTATTTT+AGG | + | chr8_2:66432209-66432228 | None:intergenic | 15.0% |
| !! | TAAATTTCAAAATCATATGA+TGG | + | chr8_2:66432615-66432634 | None:intergenic | 15.0% |
| !!! | ATTATTTTTTCATATTCCTT+TGG | + | chr8_2:66432660-66432679 | None:intergenic | 15.0% |
| !!! | TTAATTTTGTATTTTGGATA+AGG | - | chr8_2:66430924-66430943 | Msa1263300:intron | 15.0% |
| !!! | TGATTAATGATTAATTTGAT+TGG | + | chr8_2:66431240-66431259 | None:intergenic | 15.0% |
| !! | ATACAAATCTAAATTGATAT+AGG | - | chr8_2:66431532-66431551 | Msa1263300:intron | 15.0% |
| !!! | AACATTTAAGATTATTTGAA+TGG | - | chr8_2:66431867-66431886 | Msa1263300:intron | 15.0% |
| !!! | ACATTTAAGATTATTTGAAT+GGG | - | chr8_2:66431868-66431887 | Msa1263300:intron | 15.0% |
| !! | TGATGAGAAAATTATTTAAA+AGG | + | chr8_2:66431941-66431960 | None:intergenic | 15.0% |
| !!! | AATAAAACATGCATTATTTT+AGG | + | chr8_2:66432209-66432228 | None:intergenic | 15.0% |
| !! | TAAATTTCAAAATCATATGA+TGG | + | chr8_2:66432615-66432634 | None:intergenic | 15.0% |
| !!! | ATTATTTTTTCATATTCCTT+TGG | + | chr8_2:66432660-66432679 | None:intergenic | 15.0% |
| !!! | TATAATGTTACTTGATTAAG+TGG | - | chr8_2:66431004-66431023 | Msa1263300:intron | 20.0% |
| !! | CAAGAAAAAAAACATTATTC+AGG | + | chr8_2:66431112-66431131 | None:intergenic | 20.0% |
| !!! | TTTTTCTTGTTCTTAATTTC+TGG | - | chr8_2:66431123-66431142 | Msa1263300:intron | 20.0% |
| !! | AAAGTTATACCTATAAATGA+AGG | + | chr8_2:66431434-66431453 | None:intergenic | 20.0% |
| !! | TATGAATATCATTTATATGC+TGG | - | chr8_2:66431842-66431861 | Msa1263300:intron | 20.0% |
| !!! | CATTTAAGATTATTTGAATG+GGG | - | chr8_2:66431869-66431888 | Msa1263300:intron | 20.0% |
| !! | AGATATATACTCTATAAGTA+AGG | + | chr8_2:66432712-66432731 | None:intergenic | 20.0% |
| !!! | CTAATTCAAGTTTATTGATA+AGG | + | chr8_2:66432810-66432829 | None:intergenic | 20.0% |
| !!! | AACTTTTAGATTCTTAAAGA+AGG | - | chr8_2:66432842-66432861 | Msa1263300:intron | 20.0% |
| !! | ATTATTCTCTTCTACAAAAT+TGG | + | chr8_2:66432938-66432957 | None:intergenic | 20.0% |
| !! | GAGAATAATGAAAAACAATA+TGG | - | chr8_2:66432949-66432968 | Msa1263300:intron | 20.0% |
| !!! | TATAATGTTACTTGATTAAG+TGG | - | chr8_2:66431004-66431023 | Msa1263300:intron | 20.0% |
| !! | CAAGAAAAAAAACATTATTC+AGG | + | chr8_2:66431112-66431131 | None:intergenic | 20.0% |
| !!! | TTTTTCTTGTTCTTAATTTC+TGG | - | chr8_2:66431123-66431142 | Msa1263300:intron | 20.0% |
| !! | AAAGTTATACCTATAAATGA+AGG | + | chr8_2:66431434-66431453 | None:intergenic | 20.0% |
| !! | TATGAATATCATTTATATGC+TGG | - | chr8_2:66431842-66431861 | Msa1263300:intron | 20.0% |
| !!! | CATTTAAGATTATTTGAATG+GGG | - | chr8_2:66431869-66431888 | Msa1263300:intron | 20.0% |
| !! | AGATATATACTCTATAAGTA+AGG | + | chr8_2:66432712-66432731 | None:intergenic | 20.0% |
| !!! | CTAATTCAAGTTTATTGATA+AGG | + | chr8_2:66432810-66432829 | None:intergenic | 20.0% |
| !!! | AACTTTTAGATTCTTAAAGA+AGG | - | chr8_2:66432842-66432861 | Msa1263300:intron | 20.0% |
| !! | ATTATTCTCTTCTACAAAAT+TGG | + | chr8_2:66432938-66432957 | None:intergenic | 20.0% |
| !! | GAGAATAATGAAAAACAATA+TGG | - | chr8_2:66432949-66432968 | Msa1263300:intron | 20.0% |
| ! | TGATTTCATGTTGAAAATTG+TGG | - | chr8_2:66430783-66430802 | Msa1263300:CDS | 25.0% |
| ! | TAAGGAAAAAAAAGAAGATG+CGG | - | chr8_2:66430942-66430961 | Msa1263300:intron | 25.0% |
| ! | AGATGAAAGTAAATTCGTAT+TGG | - | chr8_2:66430971-66430990 | Msa1263300:intron | 25.0% |
| !! | TAAGTGGAAGATAATACTTT+TGG | - | chr8_2:66431020-66431039 | Msa1263300:intron | 25.0% |
| !! | AAGTGGAAGATAATACTTTT+GGG | - | chr8_2:66431021-66431040 | Msa1263300:intron | 25.0% |
| !!! | AATACTTTTGGGTGTAAAAT+TGG | - | chr8_2:66431032-66431051 | Msa1263300:intron | 25.0% |
| !! | TCTCATCACATTTTACATTA+TGG | - | chr8_2:66431453-66431472 | Msa1263300:intron | 25.0% |
| !! | ATTAGTCTATTTGTAACACA+TGG | + | chr8_2:66431514-66431533 | None:intergenic | 25.0% |
| ! | AAACACATACATATATGCAT+CGG | + | chr8_2:66432305-66432324 | None:intergenic | 25.0% |
| !! | TTTTACTTATTCAAAGCCAA+AGG | - | chr8_2:66432641-66432660 | Msa1263300:intron | 25.0% |
| ! | GGACACTTTAATCTTTATAA+AGG | + | chr8_2:66432789-66432808 | None:intergenic | 25.0% |
| !! | TTTTAGATTCTTAAAGAAGG+AGG | - | chr8_2:66432845-66432864 | Msa1263300:intron | 25.0% |
| !!! | GAGAAATATTTTAGCTCTAA+TGG | - | chr8_2:66432870-66432889 | Msa1263300:intron | 25.0% |
| ! | TGATTTCATGTTGAAAATTG+TGG | - | chr8_2:66430783-66430802 | Msa1263300:CDS | 25.0% |
| ! | TAAGGAAAAAAAAGAAGATG+CGG | - | chr8_2:66430942-66430961 | Msa1263300:intron | 25.0% |
| ! | AGATGAAAGTAAATTCGTAT+TGG | - | chr8_2:66430971-66430990 | Msa1263300:intron | 25.0% |
| !! | TAAGTGGAAGATAATACTTT+TGG | - | chr8_2:66431020-66431039 | Msa1263300:intron | 25.0% |
| !! | AAGTGGAAGATAATACTTTT+GGG | - | chr8_2:66431021-66431040 | Msa1263300:intron | 25.0% |
| !!! | AATACTTTTGGGTGTAAAAT+TGG | - | chr8_2:66431032-66431051 | Msa1263300:intron | 25.0% |
| !! | TCTCATCACATTTTACATTA+TGG | - | chr8_2:66431453-66431472 | Msa1263300:intron | 25.0% |
| !! | ATTAGTCTATTTGTAACACA+TGG | + | chr8_2:66431514-66431533 | None:intergenic | 25.0% |
| ! | AAACACATACATATATGCAT+CGG | + | chr8_2:66432305-66432324 | None:intergenic | 25.0% |
| !! | TTTTACTTATTCAAAGCCAA+AGG | - | chr8_2:66432641-66432660 | Msa1263300:intron | 25.0% |
| ! | GGACACTTTAATCTTTATAA+AGG | + | chr8_2:66432789-66432808 | None:intergenic | 25.0% |
| !! | TTTTAGATTCTTAAAGAAGG+AGG | - | chr8_2:66432845-66432864 | Msa1263300:intron | 25.0% |
| !!! | GAGAAATATTTTAGCTCTAA+TGG | - | chr8_2:66432870-66432889 | Msa1263300:intron | 25.0% |
| ! | AGTGTGCATTTGATGATAAA+AGG | - | chr8_2:66431167-66431186 | Msa1263300:CDS | 30.0% |
| TGCATAAGTACAATCTCAAT+TGG | - | chr8_2:66431192-66431211 | Msa1263300:CDS | 30.0% | |
| ! | ATTAATTTGATTGGCACTTG+AGG | + | chr8_2:66431231-66431250 | None:intergenic | 30.0% |
| CTATCGCTAAAAAAGCTTAT+TGG | - | chr8_2:66431349-66431368 | Msa1263300:intron | 30.0% | |
| TTATTGGTCGTCATACATAT+TGG | - | chr8_2:66431365-66431384 | Msa1263300:intron | 30.0% | |
| ATATAATGCACATTCTGTGT+AGG | - | chr8_2:66431389-66431408 | Msa1263300:intron | 30.0% | |
| TATAATGCACATTCTGTGTA+GGG | - | chr8_2:66431390-66431409 | Msa1263300:intron | 30.0% | |
| TTAAACTTCATAACAGAGTC+AGG | - | chr8_2:66431581-66431600 | Msa1263300:intron | 30.0% | |
| !!! | TGTTCCACTCACTATTTTTT+AGG | - | chr8_2:66431666-66431685 | Msa1263300:intron | 30.0% |
| ! | ATTCTCTAGTCCTTTTCTAT+TGG | - | chr8_2:66431741-66431760 | Msa1263300:intron | 30.0% |
| TTAAGATTATTTGAATGGGG+TGG | - | chr8_2:66431872-66431891 | Msa1263300:intron | 30.0% | |
| TGATTAATCTTCATCACTTC+TGG | + | chr8_2:66431898-66431917 | None:intergenic | 30.0% | |
| CTGACATTATATAAGCACTT+TGG | - | chr8_2:66432010-66432029 | Msa1263300:intron | 30.0% | |
| ATGAATCCTATATCTAGAGA+AGG | + | chr8_2:66432119-66432138 | None:intergenic | 30.0% | |
| GCTAGCTCATTTAATCAAAA+TGG | + | chr8_2:66432255-66432274 | None:intergenic | 30.0% | |
| AACACATACATATATGCATC+GGG | + | chr8_2:66432304-66432323 | None:intergenic | 30.0% | |
| ! | GTGCTATAATATGCTTGTTT+TGG | - | chr8_2:66432410-66432429 | Msa1263300:intron | 30.0% |
| TTGTGTCTTAACTGTTAAAG+AGG | - | chr8_2:66432434-66432453 | Msa1263300:intron | 30.0% | |
| GGATGTTGTTCTATAGAAAT+AGG | - | chr8_2:66432560-66432579 | Msa1263300:intron | 30.0% | |
| CAATGGAAAAAGAAGAAGAT+GGG | - | chr8_2:66432899-66432918 | Msa1263300:intron | 30.0% | |
| ! | AGTGTGCATTTGATGATAAA+AGG | - | chr8_2:66431167-66431186 | Msa1263300:CDS | 30.0% |
| TGCATAAGTACAATCTCAAT+TGG | - | chr8_2:66431192-66431211 | Msa1263300:CDS | 30.0% | |
| ! | ATTAATTTGATTGGCACTTG+AGG | + | chr8_2:66431231-66431250 | None:intergenic | 30.0% |
| CTATCGCTAAAAAAGCTTAT+TGG | - | chr8_2:66431349-66431368 | Msa1263300:intron | 30.0% | |
| TTATTGGTCGTCATACATAT+TGG | - | chr8_2:66431365-66431384 | Msa1263300:intron | 30.0% | |
| ATATAATGCACATTCTGTGT+AGG | - | chr8_2:66431389-66431408 | Msa1263300:intron | 30.0% | |
| TATAATGCACATTCTGTGTA+GGG | - | chr8_2:66431390-66431409 | Msa1263300:intron | 30.0% | |
| TTAAACTTCATAACAGAGTC+AGG | - | chr8_2:66431581-66431600 | Msa1263300:intron | 30.0% | |
| !!! | TGTTCCACTCACTATTTTTT+AGG | - | chr8_2:66431666-66431685 | Msa1263300:intron | 30.0% |
| ! | ATTCTCTAGTCCTTTTCTAT+TGG | - | chr8_2:66431741-66431760 | Msa1263300:intron | 30.0% |
| TTAAGATTATTTGAATGGGG+TGG | - | chr8_2:66431872-66431891 | Msa1263300:intron | 30.0% | |
| TGATTAATCTTCATCACTTC+TGG | + | chr8_2:66431898-66431917 | None:intergenic | 30.0% | |
| CTGACATTATATAAGCACTT+TGG | - | chr8_2:66432010-66432029 | Msa1263300:intron | 30.0% | |
| ATGAATCCTATATCTAGAGA+AGG | + | chr8_2:66432119-66432138 | None:intergenic | 30.0% | |
| GCTAGCTCATTTAATCAAAA+TGG | + | chr8_2:66432255-66432274 | None:intergenic | 30.0% | |
| AACACATACATATATGCATC+GGG | + | chr8_2:66432304-66432323 | None:intergenic | 30.0% | |
| ! | GTGCTATAATATGCTTGTTT+TGG | - | chr8_2:66432410-66432429 | Msa1263300:intron | 30.0% |
| TTGTGTCTTAACTGTTAAAG+AGG | - | chr8_2:66432434-66432453 | Msa1263300:intron | 30.0% | |
| GGATGTTGTTCTATAGAAAT+AGG | - | chr8_2:66432560-66432579 | Msa1263300:intron | 30.0% | |
| CAATGGAAAAAGAAGAAGAT+GGG | - | chr8_2:66432899-66432918 | Msa1263300:intron | 30.0% | |
| !! | TTCTTAATTTCTGGCAGCAA+AGG | - | chr8_2:66431132-66431151 | Msa1263300:intron | 35.0% |
| TTATCCTGAACAGTATCATC+TGG | - | chr8_2:66431283-66431302 | Msa1263300:intron | 35.0% | |
| AAATCCAGATGATACTGTTC+AGG | + | chr8_2:66431290-66431309 | None:intergenic | 35.0% | |
| ! | AGTGTTCAGATGAAAAGTGT+TGG | + | chr8_2:66431331-66431350 | None:intergenic | 35.0% |
| GATGGATATTCATGTAGTTC+AGG | + | chr8_2:66431492-66431511 | None:intergenic | 35.0% | |
| GTCTATTTGTAACACATGGA+TGG | + | chr8_2:66431510-66431529 | None:intergenic | 35.0% | |
| GTGACCTAAAAAATAGTGAG+TGG | + | chr8_2:66431673-66431692 | None:intergenic | 35.0% | |
| CGAAACATCACCAATAGAAA+AGG | + | chr8_2:66431754-66431773 | None:intergenic | 35.0% | |
| CAATCTATCTCACATTAGGT+GGG | + | chr8_2:66432071-66432090 | None:intergenic | 35.0% | |
| TCAATCTATCTCACATTAGG+TGG | + | chr8_2:66432072-66432091 | None:intergenic | 35.0% | |
| CTGTCAATCTATCTCACATT+AGG | + | chr8_2:66432075-66432094 | None:intergenic | 35.0% | |
| ATGACACCTTCTCTAGATAT+AGG | - | chr8_2:66432110-66432129 | Msa1263300:intron | 35.0% | |
| ATCAACCGTACATGACATAA+AGG | - | chr8_2:66432330-66432349 | Msa1263300:intron | 35.0% | |
| GAATGCCTTTATGTCATGTA+CGG | + | chr8_2:66432338-66432357 | None:intergenic | 35.0% | |
| GCATTCCAAAATTGTTGTGA+TGG | - | chr8_2:66432352-66432371 | Msa1263300:intron | 35.0% | |
| ! | ATGGTCCATCACAACAATTT+TGG | + | chr8_2:66432360-66432379 | None:intergenic | 35.0% |
| !! | AAAATTGTTGTGATGGACCA+TGG | - | chr8_2:66432359-66432378 | Msa1263300:intron | 35.0% |
| !! | TTATACTACTTTTCAGCTGC+AGG | - | chr8_2:66432463-66432482 | Msa1263300:intron | 35.0% |
| !!! | AATGCAGGTTTGCTGATTTT+TGG | - | chr8_2:66432539-66432558 | Msa1263300:intron | 35.0% |
| TAGATTCTTAAAGAAGGAGG+AGG | - | chr8_2:66432848-66432867 | Msa1263300:intron | 35.0% | |
| ! | CCATCTTCTTCTTTTTCCAT+TGG | + | chr8_2:66432901-66432920 | None:intergenic | 35.0% |
| CCAATGGAAAAAGAAGAAGA+TGG | - | chr8_2:66432898-66432917 | Msa1263300:intron | 35.0% | |
| !! | TTCTTAATTTCTGGCAGCAA+AGG | - | chr8_2:66431132-66431151 | Msa1263300:intron | 35.0% |
| TTATCCTGAACAGTATCATC+TGG | - | chr8_2:66431283-66431302 | Msa1263300:intron | 35.0% | |
| AAATCCAGATGATACTGTTC+AGG | + | chr8_2:66431290-66431309 | None:intergenic | 35.0% | |
| ! | AGTGTTCAGATGAAAAGTGT+TGG | + | chr8_2:66431331-66431350 | None:intergenic | 35.0% |
| GATGGATATTCATGTAGTTC+AGG | + | chr8_2:66431492-66431511 | None:intergenic | 35.0% | |
| GTCTATTTGTAACACATGGA+TGG | + | chr8_2:66431510-66431529 | None:intergenic | 35.0% | |
| GTGACCTAAAAAATAGTGAG+TGG | + | chr8_2:66431673-66431692 | None:intergenic | 35.0% | |
| CGAAACATCACCAATAGAAA+AGG | + | chr8_2:66431754-66431773 | None:intergenic | 35.0% | |
| CAATCTATCTCACATTAGGT+GGG | + | chr8_2:66432071-66432090 | None:intergenic | 35.0% | |
| TCAATCTATCTCACATTAGG+TGG | + | chr8_2:66432072-66432091 | None:intergenic | 35.0% | |
| CTGTCAATCTATCTCACATT+AGG | + | chr8_2:66432075-66432094 | None:intergenic | 35.0% | |
| ATGACACCTTCTCTAGATAT+AGG | - | chr8_2:66432110-66432129 | Msa1263300:intron | 35.0% | |
| ATCAACCGTACATGACATAA+AGG | - | chr8_2:66432330-66432349 | Msa1263300:intron | 35.0% | |
| GAATGCCTTTATGTCATGTA+CGG | + | chr8_2:66432338-66432357 | None:intergenic | 35.0% | |
| GCATTCCAAAATTGTTGTGA+TGG | - | chr8_2:66432352-66432371 | Msa1263300:intron | 35.0% | |
| ! | ATGGTCCATCACAACAATTT+TGG | + | chr8_2:66432360-66432379 | None:intergenic | 35.0% |
| !! | AAAATTGTTGTGATGGACCA+TGG | - | chr8_2:66432359-66432378 | Msa1263300:intron | 35.0% |
| !! | TTATACTACTTTTCAGCTGC+AGG | - | chr8_2:66432463-66432482 | Msa1263300:intron | 35.0% |
| !!! | AATGCAGGTTTGCTGATTTT+TGG | - | chr8_2:66432539-66432558 | Msa1263300:intron | 35.0% |
| TAGATTCTTAAAGAAGGAGG+AGG | - | chr8_2:66432848-66432867 | Msa1263300:intron | 35.0% | |
| ! | CCATCTTCTTCTTTTTCCAT+TGG | + | chr8_2:66432901-66432920 | None:intergenic | 35.0% |
| CCAATGGAAAAAGAAGAAGA+TGG | - | chr8_2:66432898-66432917 | Msa1263300:intron | 35.0% | |
| ACTTCTCTCAGTTTGAACCA+TGG | - | chr8_2:66430833-66430852 | Msa1263300:intron | 40.0% | |
| ! | CAGTATCATCTGGATTTTGC+AGG | - | chr8_2:66431293-66431312 | Msa1263300:intron | 40.0% |
| TGCTCACTGCCTTCATTTAT+AGG | - | chr8_2:66431422-66431441 | Msa1263300:intron | 40.0% | |
| GACTTTACCATACGTTCTCA+AGG | + | chr8_2:66432150-66432169 | None:intergenic | 40.0% | |
| TGAGAACGTATGGTAAAGTC+AGG | - | chr8_2:66432150-66432169 | Msa1263300:intron | 40.0% | |
| AAAGTCAGGTCTTCTTCACT+TGG | - | chr8_2:66432164-66432183 | Msa1263300:intron | 40.0% | |
| AATTACATGTCACCACTCCA+TGG | + | chr8_2:66432379-66432398 | None:intergenic | 40.0% | |
| ATGGAGTGGTGACATGTAAT+TGG | - | chr8_2:66432378-66432397 | Msa1263300:intron | 40.0% | |
| GCATTCAAGAGCAATGCTTT+GGG | + | chr8_2:66432499-66432518 | None:intergenic | 40.0% | |
| AGCATTCAAGAGCAATGCTT+TGG | + | chr8_2:66432500-66432519 | None:intergenic | 40.0% | |
| ACTTCTCTCAGTTTGAACCA+TGG | - | chr8_2:66430833-66430852 | Msa1263300:intron | 40.0% | |
| ! | CAGTATCATCTGGATTTTGC+AGG | - | chr8_2:66431293-66431312 | Msa1263300:intron | 40.0% |
| TGCTCACTGCCTTCATTTAT+AGG | - | chr8_2:66431422-66431441 | Msa1263300:intron | 40.0% | |
| GACTTTACCATACGTTCTCA+AGG | + | chr8_2:66432150-66432169 | None:intergenic | 40.0% | |
| TGAGAACGTATGGTAAAGTC+AGG | - | chr8_2:66432150-66432169 | Msa1263300:intron | 40.0% | |
| AAAGTCAGGTCTTCTTCACT+TGG | - | chr8_2:66432164-66432183 | Msa1263300:intron | 40.0% | |
| AATTACATGTCACCACTCCA+TGG | + | chr8_2:66432379-66432398 | None:intergenic | 40.0% | |
| ATGGAGTGGTGACATGTAAT+TGG | - | chr8_2:66432378-66432397 | Msa1263300:intron | 40.0% | |
| GCATTCAAGAGCAATGCTTT+GGG | + | chr8_2:66432499-66432518 | None:intergenic | 40.0% | |
| AGCATTCAAGAGCAATGCTT+TGG | + | chr8_2:66432500-66432519 | None:intergenic | 40.0% | |
| CAGTGAAGTAATTCGCACCA+TGG | + | chr8_2:66430853-66430872 | None:intergenic | 45.0% | |
| GTTCACACCTTGAGAACGTA+TGG | - | chr8_2:66432140-66432159 | Msa1263300:intron | 45.0% | |
| TCAGGTCTTCTTCACTTGGA+TGG | - | chr8_2:66432168-66432187 | Msa1263300:intron | 45.0% | |
| ! | TGCTCTTGAATGCTTTTGCC+TGG | - | chr8_2:66432506-66432525 | Msa1263300:intron | 45.0% |
| !! | CCTGCATTTCACTTTTGACC+AGG | + | chr8_2:66432527-66432546 | None:intergenic | 45.0% |
| CCTGGTCAAAAGTGAAATGC+AGG | - | chr8_2:66432524-66432543 | Msa1263300:intron | 45.0% | |
| ! | AGCTCTAATGGTACGTCCAA+TGG | - | chr8_2:66432882-66432901 | Msa1263300:intron | 45.0% |
| CAGTGAAGTAATTCGCACCA+TGG | + | chr8_2:66430853-66430872 | None:intergenic | 45.0% | |
| GTTCACACCTTGAGAACGTA+TGG | - | chr8_2:66432140-66432159 | Msa1263300:intron | 45.0% | |
| TCAGGTCTTCTTCACTTGGA+TGG | - | chr8_2:66432168-66432187 | Msa1263300:intron | 45.0% | |
| ! | TGCTCTTGAATGCTTTTGCC+TGG | - | chr8_2:66432506-66432525 | Msa1263300:intron | 45.0% |
| !! | CCTGCATTTCACTTTTGACC+AGG | + | chr8_2:66432527-66432546 | None:intergenic | 45.0% |
| CCTGGTCAAAAGTGAAATGC+AGG | - | chr8_2:66432524-66432543 | Msa1263300:intron | 45.0% | |
| ! | AGCTCTAATGGTACGTCCAA+TGG | - | chr8_2:66432882-66432901 | Msa1263300:intron | 45.0% |
| !!! | TTATATTTAATTTTGTATTT+TGG | - | chr8_2:66430918-66430937 | Msa1263300:intron | 5.0% |
| !!! | TTATATTTAATTTTGTATTT+TGG | - | chr8_2:66430918-66430937 | Msa1263300:intron | 5.0% |
| ! | AGCTAGCTTAGCTGACTGCA+TGG | - | chr8_2:66432268-66432287 | Msa1263300:intron | 50.0% |
| !! | TGTTGTGATGGACCATGGAG+TGG | - | chr8_2:66432364-66432383 | Msa1263300:intron | 50.0% |
| ! | AGCTAGCTTAGCTGACTGCA+TGG | - | chr8_2:66432268-66432287 | Msa1263300:intron | 50.0% |
| !! | TGTTGTGATGGACCATGGAG+TGG | - | chr8_2:66432364-66432383 | Msa1263300:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 66430708 | 66432975 | 66430708 | ID=Msa1263300;Name=Msa1263300 |
| chr8_2 | mRNA | 66430708 | 66432975 | 66430708 | ID=Msa1263300-mRNA-1;Parent=Msa1263300;Name=Msa1263300-mRNA-1;_AED=0.27;_eAED=0.67;_QI=0|0|0|0.5|0|0|4|0|73 |
| chr8_2 | exon | 66432967 | 66432975 | 66432967 | ID=Msa1263300-mRNA-1:exon:21699;Parent=Msa1263300-mRNA-1 |
| chr8_2 | exon | 66432081 | 66432086 | 66432081 | ID=Msa1263300-mRNA-1:exon:21698;Parent=Msa1263300-mRNA-1 |
| chr8_2 | exon | 66431138 | 66431229 | 66431138 | ID=Msa1263300-mRNA-1:exon:21697;Parent=Msa1263300-mRNA-1 |
| chr8_2 | exon | 66430708 | 66430822 | 66430708 | ID=Msa1263300-mRNA-1:exon:21696;Parent=Msa1263300-mRNA-1 |
| chr8_2 | CDS | 66432967 | 66432975 | 66432967 | ID=Msa1263300-mRNA-1:cds;Parent=Msa1263300-mRNA-1 |
| chr8_2 | CDS | 66432081 | 66432086 | 66432081 | ID=Msa1263300-mRNA-1:cds;Parent=Msa1263300-mRNA-1 |
| chr8_2 | CDS | 66431138 | 66431229 | 66431138 | ID=Msa1263300-mRNA-1:cds;Parent=Msa1263300-mRNA-1 |
| chr8_2 | CDS | 66430708 | 66430822 | 66430708 | ID=Msa1263300-mRNA-1:cds;Parent=Msa1263300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
