Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0016570 | KEH15532.1 | 84.112 | 107 | 13 | 1 | 1 | 107 | 7 | 109 | 7.18e-55 | 183 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0016570 | A0A072TDQ4 | 84.112 | 107 | 13 | 1 | 1 | 107 | 7 | 109 | 3.43e-55 | 183 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015750 | Msa0016570 | 0.905814 | 2.883444e-80 | -8.615850e-47 |
| Msa0016570 | Msa0016580 | 0.934146 | 6.336800e-96 | -8.615850e-47 |
| Msa0016570 | Msa0064970 | 0.867604 | 1.210468e-65 | -8.615850e-47 |
| Msa0016570 | Msa0071500 | 0.807259 | 5.515884e-50 | -8.615850e-47 |
| Msa0016570 | Msa0092630 | 0.817946 | 2.532473e-52 | -8.615850e-47 |
| Msa0016570 | Msa0093170 | 0.802298 | 5.995601e-49 | -8.615850e-47 |
| Msa0016570 | Msa0102070 | 0.863414 | 2.532466e-64 | -8.615850e-47 |
| Msa0016570 | Msa0110260 | 0.882738 | 8.094296e-71 | -8.615850e-47 |
| Msa0016570 | Msa0110270 | 0.941127 | 7.135110e-101 | -8.615850e-47 |
| Msa0016570 | Msa0111510 | 0.827829 | 1.260437e-54 | -8.615850e-47 |
| Msa0016570 | Msa0123810 | 0.833852 | 4.203100e-56 | -8.615850e-47 |
| Msa0016570 | Msa0124100 | 0.816689 | 4.857414e-52 | -8.615850e-47 |
| Msa0016570 | Msa0124150 | 0.808845 | 2.535657e-50 | -8.615850e-47 |
| Msa0016570 | Msa0142220 | 0.873320 | 1.611259e-67 | -8.615850e-47 |
| Msa0016570 | Msa0145750 | 0.814072 | 1.855985e-51 | -8.615850e-47 |
| Msa0016570 | Msa0153910 | 0.855355 | 6.668818e-62 | -8.615850e-47 |
| Msa0016570 | Msa0197010 | 0.826727 | 2.314157e-54 | -8.615850e-47 |
| Msa0016570 | Msa0200000 | 0.841577 | 4.366310e-58 | -8.615850e-47 |
| Msa0016570 | Msa0227480 | 0.852064 | 5.899714e-61 | -8.615850e-47 |
| Msa0016570 | Msa0231000 | 0.821034 | 5.002856e-53 | -8.615850e-47 |
| Msa0016570 | Msa0232850 | 0.833580 | 4.915255e-56 | -8.615850e-47 |
| Msa0016570 | Msa0235140 | 0.825222 | 5.274151e-54 | -8.615850e-47 |
| Msa0016570 | Msa0236250 | 0.815673 | 8.194012e-52 | -8.615850e-47 |
| Msa0016570 | Msa0252970 | 0.831201 | 1.908822e-55 | -8.615850e-47 |
| Msa0016570 | Msa0256440 | 0.801974 | 6.989169e-49 | -8.615850e-47 |
| Msa0016570 | Msa0266720 | 0.814858 | 1.243570e-51 | -8.615850e-47 |
| Msa0016570 | Msa0267000 | 0.864595 | 1.086283e-64 | -8.615850e-47 |
| Msa0016570 | Msa0267010 | 0.867397 | 1.410772e-65 | -8.615850e-47 |
| Msa0016570 | Msa0270520 | 0.854990 | 8.516306e-62 | -8.615850e-47 |
| Msa0016570 | Msa0273100 | 0.823148 | 1.619161e-53 | -8.615850e-47 |
| Msa0016570 | Msa0295770 | 0.816916 | 4.319897e-52 | -8.615850e-47 |
| Msa0016570 | Msa0304170 | 0.884009 | 2.764178e-71 | -8.615850e-47 |
| Msa0016570 | Msa0306460 | 0.914119 | 2.785096e-84 | -8.615850e-47 |
| Msa0016570 | Msa0309020 | 0.852111 | 5.718361e-61 | -8.615850e-47 |
| Msa0016570 | Msa0313760 | 0.807629 | 4.603119e-50 | -8.615850e-47 |
| Msa0016570 | Msa0342240 | 0.888991 | 3.612349e-73 | -8.615850e-47 |
| Msa0016570 | Msa0355220 | 0.813121 | 3.004368e-51 | -8.615850e-47 |
| Msa0016570 | Msa0360510 | 0.866031 | 3.837486e-65 | -8.615850e-47 |
| Msa0016570 | Msa0362420 | 0.817627 | 2.989787e-52 | -8.615850e-47 |
| Msa0016570 | Msa0363300 | 0.818334 | 2.068899e-52 | -8.615850e-47 |
| Msa0016570 | Msa0365500 | 0.827463 | 1.542645e-54 | -8.615850e-47 |
| Msa0016570 | Msa0371730 | 0.812455 | 4.204080e-51 | -8.615850e-47 |
| Msa0016570 | Msa0384800 | 0.856110 | 4.015706e-62 | -8.615850e-47 |
| Msa0016570 | Msa0394970 | 0.805478 | 1.309497e-49 | -8.615850e-47 |
| Msa0016570 | Msa0396600 | 0.803859 | 2.851027e-49 | -8.615850e-47 |
| Msa0016570 | Msa0402290 | 0.818534 | 1.864794e-52 | -8.615850e-47 |
| Msa0016570 | Msa0407750 | 0.832436 | 9.461492e-56 | -8.615850e-47 |
| Msa0016570 | Msa0414410 | 0.864551 | 1.121035e-64 | -8.615850e-47 |
| Msa0016570 | Msa0414420 | 0.886031 | 4.869090e-72 | -8.615850e-47 |
| Msa0016570 | Msa0436780 | 0.811798 | 5.845770e-51 | -8.615850e-47 |
| Msa0016570 | Msa0436800 | 0.829814 | 4.171180e-55 | -8.615850e-47 |
| Msa0016570 | Msa0438620 | 0.843957 | 1.018091e-58 | -8.615850e-47 |
| Msa0016570 | Msa0444130 | 0.873314 | 1.618006e-67 | -8.615850e-47 |
| Msa0016570 | Msa0450000 | 0.832363 | 9.864999e-56 | -8.615850e-47 |
| Msa0016570 | Msa0450570 | 0.813492 | 2.490207e-51 | -8.615850e-47 |
| Msa0016570 | Msa0451730 | 0.800882 | 1.169824e-48 | -8.615850e-47 |
| Msa0016570 | Msa0452900 | 0.888508 | 5.548118e-73 | -8.615850e-47 |
| Msa0016570 | Msa0453120 | 0.846159 | 2.586750e-59 | -8.615850e-47 |
| Msa0016570 | Msa0454370 | 0.809074 | 2.265072e-50 | -8.615850e-47 |
| Msa0016570 | Msa0454910 | 0.840915 | 6.519469e-58 | -8.615850e-47 |
| Msa0016570 | Msa0459160 | 0.846917 | 1.606637e-59 | -8.615850e-47 |
| Msa0016570 | Msa0459170 | 0.818347 | 2.055287e-52 | -8.615850e-47 |
| Msa0016570 | Msa0485370 | 0.815478 | 9.058893e-52 | -8.615850e-47 |
| Msa0016570 | Msa0486280 | 0.803338 | 3.656808e-49 | -8.615850e-47 |
| Msa0016570 | Msa0491590 | 0.844914 | 5.626386e-59 | -8.615850e-47 |
| Msa0016570 | Msa0502340 | 0.817393 | 3.374765e-52 | -8.615850e-47 |
| Msa0016570 | Msa0502760 | 0.867720 | 1.111354e-65 | -8.615850e-47 |
| Msa0016570 | Msa0506270 | 0.843555 | 1.303590e-58 | -8.615850e-47 |
| Msa0016570 | Msa0534540 | 0.803245 | 3.821586e-49 | -8.615850e-47 |
| Msa0016570 | Msa0544240 | 0.806597 | 7.613015e-50 | -8.615850e-47 |
| Msa0016570 | Msa0545200 | 0.822976 | 1.775951e-53 | -8.615850e-47 |
| Msa0016570 | Msa0564890 | 0.863362 | 2.627220e-64 | -8.615850e-47 |
| Msa0016570 | Msa0589780 | 0.817093 | 3.943894e-52 | -8.615850e-47 |
| Msa0016570 | Msa0592680 | 0.815268 | 1.008479e-51 | -8.615850e-47 |
| Msa0016570 | Msa0596150 | 0.839157 | 1.874584e-57 | -8.615850e-47 |
| Msa0016570 | Msa0598780 | 0.816898 | 4.360250e-52 | -8.615850e-47 |
| Msa0016570 | Msa0600700 | 0.812551 | 4.005781e-51 | -8.615850e-47 |
| Msa0016570 | Msa0604350 | 0.839489 | 1.536685e-57 | -8.615850e-47 |
| Msa0016570 | Msa0636170 | 0.855087 | 7.979243e-62 | -8.615850e-47 |
| Msa0016570 | Msa0639610 | 0.817618 | 3.003055e-52 | -8.615850e-47 |
| Msa0016570 | Msa0650630 | 0.806439 | 8.221888e-50 | -8.615850e-47 |
| Msa0016570 | Msa0668260 | 0.817228 | 3.676929e-52 | -8.615850e-47 |
| Msa0016570 | Msa0678930 | 0.855518 | 5.976923e-62 | -8.615850e-47 |
| Msa0016570 | Msa0686270 | 0.804237 | 2.379201e-49 | -8.615850e-47 |
| Msa0016570 | Msa0694370 | 0.849768 | 2.615786e-60 | -8.615850e-47 |
| Msa0016570 | Msa0697060 | 0.815942 | 7.138665e-52 | -8.615850e-47 |
| Msa0016570 | Msa0697120 | 0.803361 | 3.616449e-49 | -8.615850e-47 |
| Msa0016570 | Msa0726140 | 0.857819 | 1.258265e-62 | -8.615850e-47 |
| Msa0016570 | Msa0729800 | 0.862334 | 5.456709e-64 | -8.615850e-47 |
| Msa0016570 | Msa0732310 | 0.803174 | 3.953109e-49 | -8.615850e-47 |
| Msa0016570 | Msa0733290 | 0.845998 | 2.862598e-59 | -8.615850e-47 |
| Msa0016570 | Msa0735080 | 0.810640 | 1.042349e-50 | -8.615850e-47 |
| Msa0016570 | Msa0741990 | 0.864223 | 1.419234e-64 | -8.615850e-47 |
| Msa0016570 | Msa0743810 | 0.888653 | 4.876584e-73 | -8.615850e-47 |
| Msa0016570 | Msa0745060 | 0.866346 | 3.049591e-65 | -8.615850e-47 |
| Msa0016570 | Msa0764960 | 0.856537 | 3.008621e-62 | -8.615850e-47 |
| Msa0016570 | Msa0766630 | 0.819005 | 1.457576e-52 | -8.615850e-47 |
| Msa0016570 | Msa0767720 | 0.891683 | 3.175977e-74 | -8.615850e-47 |
| Msa0016570 | Msa0777790 | 0.809976 | 1.449575e-50 | -8.615850e-47 |
| Msa0016570 | Msa0783160 | 0.871369 | 7.202522e-67 | -8.615850e-47 |
| Msa0016570 | Msa0787600 | 0.856020 | 4.265458e-62 | -8.615850e-47 |
| Msa0016570 | Msa0789250 | 0.872028 | 4.356373e-67 | -8.615850e-47 |
| Msa0016570 | Msa0808010 | 0.826553 | 2.547141e-54 | -8.615850e-47 |
| Msa0016570 | Msa0808020 | 0.822762 | 1.991933e-53 | -8.615850e-47 |
| Msa0016570 | Msa0811080 | 0.878877 | 1.967151e-69 | -8.615850e-47 |
| Msa0016570 | Msa0811270 | 0.806076 | 9.807068e-50 | -8.615850e-47 |
| Msa0016570 | Msa0813400 | 0.804928 | 1.706901e-49 | -8.615850e-47 |
| Msa0016570 | Msa0820850 | 0.802341 | 5.874594e-49 | -8.615850e-47 |
| Msa0016570 | Msa0824600 | 0.804185 | 2.439011e-49 | -8.615850e-47 |
| Msa0016570 | Msa0825860 | 0.856145 | 3.921943e-62 | -8.615850e-47 |
| Msa0016570 | Msa0826750 | 0.813771 | 2.162089e-51 | -8.615850e-47 |
| Msa0016570 | Msa0833290 | 0.808787 | 2.608690e-50 | -8.615850e-47 |
| Msa0016570 | Msa0846210 | 0.819438 | 1.161279e-52 | -8.615850e-47 |
| Msa0016570 | Msa0846330 | 0.828005 | 1.143420e-54 | -8.615850e-47 |
| Msa0016570 | Msa0846350 | 0.850544 | 1.585322e-60 | -8.615850e-47 |
| Msa0016570 | Msa0848060 | 0.815388 | 9.483786e-52 | -8.615850e-47 |
| Msa0016570 | Msa0848960 | 0.809128 | 2.205271e-50 | -8.615850e-47 |
| Msa0016570 | Msa0854980 | 0.821350 | 4.230972e-53 | -8.615850e-47 |
| Msa0016570 | Msa0858980 | 0.824725 | 6.906464e-54 | -8.615850e-47 |
| Msa0016570 | Msa0861130 | 0.800590 | 1.342174e-48 | -8.615850e-47 |
| Msa0016570 | Msa0865320 | 0.836275 | 1.029368e-56 | -8.615850e-47 |
| Msa0016570 | Msa0872230 | 0.833872 | 4.154045e-56 | -8.615850e-47 |
| Msa0016570 | Msa0885280 | 0.814338 | 1.620732e-51 | -8.615850e-47 |
| Msa0016570 | Msa0885290 | 0.855871 | 4.717522e-62 | -8.615850e-47 |
| Msa0016570 | Msa0886750 | 0.835088 | 2.056768e-56 | -8.615850e-47 |
| Msa0016570 | Msa0888370 | 0.845724 | 3.397955e-59 | -8.615850e-47 |
| Msa0016570 | Msa0889850 | 0.821148 | 4.710478e-53 | -8.615850e-47 |
| Msa0016570 | Msa0896080 | 0.816975 | 4.191465e-52 | -8.615850e-47 |
| Msa0016570 | Msa0907260 | 0.814092 | 1.837461e-51 | -8.615850e-47 |
| Msa0016570 | Msa0952350 | 0.800377 | 1.483289e-48 | -8.615850e-47 |
| Msa0016570 | Msa0954910 | 0.823153 | 1.614498e-53 | -8.615850e-47 |
| Msa0016570 | Msa0956270 | 0.819906 | 9.082647e-53 | -8.615850e-47 |
| Msa0016570 | Msa0957680 | 0.808695 | 2.729140e-50 | -8.615850e-47 |
| Msa0016570 | Msa0957860 | 0.815786 | 7.734055e-52 | -8.615850e-47 |
| Msa0016570 | Msa0957960 | 0.816019 | 6.861014e-52 | -8.615850e-47 |
| Msa0016570 | Msa0969260 | 0.803468 | 3.436337e-49 | -8.615850e-47 |
| Msa0016570 | Msa0974870 | 0.806393 | 8.407236e-50 | -8.615850e-47 |
| Msa0016570 | Msa0976670 | 0.800490 | 1.406201e-48 | -8.615850e-47 |
| Msa0016570 | Msa0979850 | 0.809380 | 1.947646e-50 | -8.615850e-47 |
| Msa0016570 | Msa0981270 | 0.812072 | 5.096799e-51 | -8.615850e-47 |
| Msa0016570 | Msa0981370 | 0.850386 | 1.755903e-60 | -8.615850e-47 |
| Msa0016570 | Msa0989060 | 0.848763 | 4.982518e-60 | -8.615850e-47 |
| Msa0016570 | Msa1014540 | 0.805333 | 1.404159e-49 | -8.615850e-47 |
| Msa0016570 | Msa1016280 | 0.857559 | 1.503103e-62 | -8.615850e-47 |
| Msa0016570 | Msa1023010 | 0.803891 | 2.806889e-49 | -8.615850e-47 |
| Msa0016570 | Msa1023050 | 0.809557 | 1.784157e-50 | -8.615850e-47 |
| Msa0016570 | Msa1023830 | 0.802538 | 5.349060e-49 | -8.615850e-47 |
| Msa0016570 | Msa1024240 | 0.836363 | 9.778446e-57 | -8.615850e-47 |
| Msa0016570 | Msa1024370 | 0.833847 | 4.215382e-56 | -8.615850e-47 |
| Msa0016570 | Msa1025360 | 0.874339 | 7.294671e-68 | -8.615850e-47 |
| Msa0016570 | Msa1025370 | 0.864157 | 1.488011e-64 | -8.615850e-47 |
| Msa0016570 | Msa1030060 | 0.832029 | 1.193482e-55 | -8.615850e-47 |
| Msa0016570 | Msa1044830 | 0.871462 | 6.708014e-67 | -8.615850e-47 |
| Msa0016570 | Msa1044840 | 0.873865 | 1.055794e-67 | -8.615850e-47 |
| Msa0016570 | Msa1054790 | 0.809670 | 1.686665e-50 | -8.615850e-47 |
| Msa0016570 | Msa1059570 | 0.807727 | 4.388407e-50 | -8.615850e-47 |
| Msa0016570 | Msa1060840 | 0.808072 | 3.706095e-50 | -8.615850e-47 |
| Msa0016570 | Msa1077460 | 0.805901 | 1.067221e-49 | -8.615850e-47 |
| Msa0016570 | Msa1092990 | 0.871082 | 8.957091e-67 | -8.615850e-47 |
| Msa0016570 | Msa1099970 | 0.821182 | 4.624713e-53 | -8.615850e-47 |
| Msa0016570 | Msa1100980 | 0.864656 | 1.039104e-64 | -8.615850e-47 |
| Msa0016570 | Msa1104630 | 0.804209 | 2.411456e-49 | -8.615850e-47 |
| Msa0016570 | Msa1109440 | 0.841674 | 4.118899e-58 | -8.615850e-47 |
| Msa0016570 | Msa1111150 | 0.825943 | 3.558729e-54 | -8.615850e-47 |
| Msa0016570 | Msa1114030 | 0.808483 | 3.029491e-50 | -8.615850e-47 |
| Msa0016570 | Msa1121200 | 0.849551 | 3.006452e-60 | -8.615850e-47 |
| Msa0016570 | Msa1121480 | 0.814154 | 1.780538e-51 | -8.615850e-47 |
| Msa0016570 | Msa1121490 | 0.802599 | 5.198361e-49 | -8.615850e-47 |
| Msa0016570 | Msa1135220 | 0.807291 | 5.431319e-50 | -8.615850e-47 |
| Msa0016570 | Msa1135740 | 0.844346 | 8.003166e-59 | -8.615850e-47 |
| Msa0016570 | Msa1136090 | 0.815781 | 7.752066e-52 | -8.615850e-47 |
| Msa0016570 | Msa1137690 | 0.803194 | 3.916000e-49 | -8.615850e-47 |
| Msa0016570 | Msa1146110 | 0.909222 | 7.225635e-82 | -8.615850e-47 |
| Msa0016570 | Msa1148020 | 0.842881 | 1.972563e-58 | -8.615850e-47 |
| Msa0016570 | Msa1150370 | 0.845271 | 4.507675e-59 | -8.615850e-47 |
| Msa0016570 | Msa1160670 | 0.843512 | 1.339007e-58 | -8.615850e-47 |
| Msa0016570 | Msa1164120 | 0.803273 | 3.770655e-49 | -8.615850e-47 |
| Msa0016570 | Msa1178340 | 0.802419 | 5.660403e-49 | -8.615850e-47 |
| Msa0016570 | Msa1187940 | 0.872351 | 3.399395e-67 | -8.615850e-47 |
| Msa0016570 | Msa1187950 | 0.886435 | 3.430385e-72 | -8.615850e-47 |
| Msa0016570 | Msa1192640 | 0.863178 | 2.995924e-64 | -8.615850e-47 |
| Msa0016570 | Msa1230430 | 0.812893 | 3.371097e-51 | -8.615850e-47 |
| Msa0016570 | Msa1246880 | 0.821849 | 3.244483e-53 | -8.615850e-47 |
| Msa0016570 | Msa1248300 | 0.801184 | 1.014764e-48 | -8.615850e-47 |
| Msa0016570 | Msa1251910 | 0.811680 | 6.202893e-51 | -8.615850e-47 |
| Msa0016570 | Msa1253000 | 0.802754 | 4.829230e-49 | -8.615850e-47 |
| Msa0016570 | Msa1260100 | 0.805189 | 1.504896e-49 | -8.615850e-47 |
| Msa0016570 | Msa1263300 | 0.805682 | 1.186715e-49 | -8.615850e-47 |
| Msa0016570 | Msa1269670 | 0.865828 | 4.448477e-65 | -8.615850e-47 |
| Msa0016570 | Msa1270230 | 0.894043 | 3.571171e-75 | -8.615850e-47 |
| Msa0016570 | Msa1270240 | 0.866802 | 2.184736e-65 | -8.615850e-47 |
| Msa0016570 | Msa1270270 | 0.852532 | 4.340957e-61 | -8.615850e-47 |
| Msa0016570 | Msa1273230 | 0.833043 | 6.690263e-56 | -8.615850e-47 |
| Msa0016570 | Msa1283330 | 0.888850 | 4.093878e-73 | -8.615850e-47 |
| Msa0016570 | Msa1284680 | 0.835703 | 1.438291e-56 | -8.615850e-47 |
| Msa0016570 | Msa1285930 | 0.882054 | 1.437058e-70 | -8.615850e-47 |
| Msa0016570 | Msa1287800 | 0.876592 | 1.235164e-68 | -8.615850e-47 |
| Msa0016570 | Msa1287810 | 0.889731 | 1.862718e-73 | -8.615850e-47 |
| Msa0016570 | Msa1287830 | 0.805633 | 1.214994e-49 | -8.615850e-47 |
| Msa0016570 | Msa1289420 | 0.813866 | 2.060573e-51 | -8.615850e-47 |
| Msa0016570 | Msa1289430 | 0.848236 | 6.969651e-60 | -8.615850e-47 |
| Msa0016570 | Msa1305480 | 0.815960 | 7.073425e-52 | -8.615850e-47 |
| Msa0016570 | Msa1307890 | 0.827866 | 1.235069e-54 | -8.615850e-47 |
| Msa0016570 | Msa1310120 | 0.812142 | 4.920022e-51 | -8.615850e-47 |
| Msa0016570 | Msa1320300 | 0.848791 | 4.891852e-60 | -8.615850e-47 |
| Msa0016570 | Msa1340590 | 0.855569 | 5.777638e-62 | -8.615850e-47 |
| Msa0016570 | Msa1342200 | 0.802081 | 6.644561e-49 | -8.615850e-47 |
| Msa0016570 | Msa1344520 | 0.833025 | 6.759774e-56 | -8.615850e-47 |
| Msa0016570 | Msa1360610 | 0.805468 | 1.315763e-49 | -8.615850e-47 |
| Msa0016570 | Msa1369430 | 0.802444 | 5.593101e-49 | -8.615850e-47 |
| Msa0016570 | Msa1382690 | 0.820181 | 7.856247e-53 | -8.615850e-47 |
| Msa0016570 | Msa1382700 | 0.809022 | 2.323643e-50 | -8.615850e-47 |
| Msa0016570 | Msa1397150 | 0.817757 | 2.793974e-52 | -8.615850e-47 |
| Msa0016570 | Msa1397580 | 0.846757 | 1.777709e-59 | -8.615850e-47 |
| Msa0016570 | Msa1397860 | 0.816073 | 6.672910e-52 | -8.615850e-47 |
| Msa0016570 | Msa1402790 | 0.812991 | 3.208516e-51 | -8.615850e-47 |
| Msa0016570 | Msa1404000 | 0.856388 | 3.327594e-62 | -8.615850e-47 |
| Msa0016570 | Msa1408780 | 0.817179 | 3.771450e-52 | -8.615850e-47 |
| Msa0016570 | Msa1415310 | 0.840032 | 1.109754e-57 | -8.615850e-47 |
| Msa0016570 | Msa1419030 | 0.800336 | 1.511605e-48 | -8.615850e-47 |
| Msa0016570 | Msa1422180 | 0.863246 | 2.855058e-64 | -8.615850e-47 |
| Msa0016570 | Msa1433120 | 0.874761 | 5.245689e-68 | -8.615850e-47 |
| Msa0016570 | Msa1451190 | 0.805800 | 1.120431e-49 | -8.615850e-47 |
| Msa0016570 | Msa1451570 | 0.808122 | 3.616233e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0016570 | MtrunA17_Chr7g0255021 | 35.106 | 94 | 54 | 2 | 14 | 107 | 75 | 161 | 1.51e-11 | 59.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 19 sgRNAs with CRISPR-Local
Find 21 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATTTCCAACTTCTTCATTA+AGG | 0.234873 | 1_1:-27493530 | None:intergenic |
| TTCACAAGTGATGTATGATA+TGG | 0.297312 | 1_1:-27493555 | None:intergenic |
| AGGAAACTAATGACACTAAA+AGG | 0.309439 | 1_1:+27493741 | Msa0016570:CDS |
| ATGAGAATTTCATCCTCCTT+TGG | 0.374944 | 1_1:-27493600 | None:intergenic |
| CTCTGATCAATCCCAACAAT+TGG | 0.395664 | 1_1:-27493651 | None:intergenic |
| ATTTCAAAGGATCCAATTGT+TGG | 0.406190 | 1_1:+27493639 | Msa0016570:CDS |
| ATTAACCTTAATGAAGAAGT+TGG | 0.447537 | 1_1:+27493525 | Msa0016570:CDS |
| TTTCAAAGGATCCAATTGTT+GGG | 0.456962 | 1_1:+27493640 | Msa0016570:CDS |
| ATGAAATTCTCATTCAATCA+TGG | 0.497742 | 1_1:+27493610 | Msa0016570:CDS |
| ACACCACAAGTTTGCACTCA+AGG | 0.503579 | 1_1:+27493489 | Msa0016570:CDS |
| AGTTTGCACTCAAGGTGGCT+TGG | 0.506608 | 1_1:+27493497 | Msa0016570:CDS |
| TCACAAGTGATGTATGATAT+GGG | 0.522775 | 1_1:-27493554 | None:intergenic |
| ATCATGGCTCAATATTTCAA+AGG | 0.547059 | 1_1:+27493626 | Msa0016570:CDS |
| GAAAGTAAAATTTCAGCCAA+AGG | 0.574785 | 1_1:+27493584 | Msa0016570:CDS |
| TGGGTTTGAATGGGTAGTAG+TGG | 0.601769 | 1_1:+27493438 | None:intergenic |
| AGTAAAATTTCAGCCAAAGG+AGG | 0.612051 | 1_1:+27493587 | Msa0016570:CDS |
| CCACAAGTTTGCACTCAAGG+TGG | 0.655877 | 1_1:+27493492 | Msa0016570:CDS |
| CCACCTTGAGTGCAAACTTG+TGG | 0.671803 | 1_1:-27493492 | None:intergenic |
| ATTGTTGGGATTGATCAGAG+AGG | 0.736327 | 1_1:+27493654 | Msa0016570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ATTAACCTTAATGAAGAAGT+TGG | + | chr1_1:27493525-27493544 | Msa0016570:CDS | 25.0% |
| ! | AATTTCCAACTTCTTCATTA+AGG | - | chr1_1:27493533-27493552 | None:intergenic | 25.0% |
| ! | ATGAAATTCTCATTCAATCA+TGG | + | chr1_1:27493610-27493629 | Msa0016570:CDS | 25.0% |
| TCACAAGTGATGTATGATAT+GGG | - | chr1_1:27493557-27493576 | None:intergenic | 30.0% | |
| TTCACAAGTGATGTATGATA+TGG | - | chr1_1:27493558-27493577 | None:intergenic | 30.0% | |
| GAAAGTAAAATTTCAGCCAA+AGG | + | chr1_1:27493584-27493603 | Msa0016570:CDS | 30.0% | |
| ATCATGGCTCAATATTTCAA+AGG | + | chr1_1:27493626-27493645 | Msa0016570:CDS | 30.0% | |
| ATTTCAAAGGATCCAATTGT+TGG | + | chr1_1:27493639-27493658 | Msa0016570:CDS | 30.0% | |
| TTTCAAAGGATCCAATTGTT+GGG | + | chr1_1:27493640-27493659 | Msa0016570:CDS | 30.0% | |
| AGGAAACTAATGACACTAAA+AGG | + | chr1_1:27493741-27493760 | Msa0016570:CDS | 30.0% | |
| AGTAAAATTTCAGCCAAAGG+AGG | + | chr1_1:27493587-27493606 | Msa0016570:CDS | 35.0% | |
| ATGAGAATTTCATCCTCCTT+TGG | - | chr1_1:27493603-27493622 | None:intergenic | 35.0% | |
| ! | ATCAGAGAGGAGATAGTTTT+TGG | + | chr1_1:27493667-27493686 | Msa0016570:CDS | 35.0% |
| CTCTGATCAATCCCAACAAT+TGG | - | chr1_1:27493654-27493673 | None:intergenic | 40.0% | |
| ATTGTTGGGATTGATCAGAG+AGG | + | chr1_1:27493654-27493673 | Msa0016570:CDS | 40.0% | |
| !! | GAGGAGATAGTTTTTGGAAG+AGG | + | chr1_1:27493673-27493692 | Msa0016570:CDS | 40.0% |
| !! | GCGACAAGAATTTTCAAGAG+AGG | + | chr1_1:27493721-27493740 | Msa0016570:CDS | 40.0% |
| ACACCACAAGTTTGCACTCA+AGG | + | chr1_1:27493489-27493508 | Msa0016570:CDS | 45.0% | |
| CCACCTTGAGTGCAAACTTG+TGG | - | chr1_1:27493495-27493514 | None:intergenic | 50.0% | |
| CCACAAGTTTGCACTCAAGG+TGG | + | chr1_1:27493492-27493511 | Msa0016570:CDS | 50.0% | |
| AGTTTGCACTCAAGGTGGCT+TGG | + | chr1_1:27493497-27493516 | Msa0016570:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 27493447 | 27493770 | 27493447 | ID=Msa0016570;Name=Msa0016570 |
| chr1_1 | mRNA | 27493447 | 27493770 | 27493447 | ID=Msa0016570-mRNA-1;Parent=Msa0016570;Name=Msa0016570-mRNA-1;_AED=0.36;_eAED=0.37;_QI=0|-1|0|1|-1|1|1|0|107 |
| chr1_1 | exon | 27493447 | 27493770 | 27493447 | ID=Msa0016570-mRNA-1:exon:9275;Parent=Msa0016570-mRNA-1 |
| chr1_1 | CDS | 27493447 | 27493770 | 27493447 | ID=Msa0016570-mRNA-1:cds;Parent=Msa0016570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
