Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0777790 | sp|Q00416|SEN1_YEAST | 28.614 | 678 | 350 | 25 | 211 | 854 | 1279 | 1856 | 4.45e-52 | 202 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0777790 | G7KFP1 | 79.797 | 886 | 115 | 6 | 15 | 889 | 51 | 883 | 0.0 | 1422 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0014710 | Msa0777790 | 0.805956 | 1.039213e-49 | -8.615850e-47 |
| Msa0016570 | Msa0777790 | 0.809976 | 1.449575e-50 | -8.615850e-47 |
| Msa0016580 | Msa0777790 | 0.809180 | 2.149126e-50 | -8.615850e-47 |
| Msa0017510 | Msa0777790 | 0.844181 | 8.862708e-59 | -8.615850e-47 |
| Msa0058820 | Msa0777790 | 0.801046 | 1.082889e-48 | -8.615850e-47 |
| Msa0110270 | Msa0777790 | 0.801884 | 7.295154e-49 | -8.615850e-47 |
| Msa0112750 | Msa0777790 | 0.812748 | 3.627519e-51 | -8.615850e-47 |
| Msa0114060 | Msa0777790 | 0.802113 | 6.543121e-49 | -8.615850e-47 |
| Msa0610430 | Msa0777790 | 0.801491 | 8.781120e-49 | -8.615850e-47 |
| Msa0625910 | Msa0777790 | 0.801055 | 1.078552e-48 | -8.615850e-47 |
| Msa0626090 | Msa0777790 | 0.811309 | 7.467984e-51 | -8.615850e-47 |
| Msa0657970 | Msa0777790 | 0.861874 | 7.550771e-64 | -8.615850e-47 |
| Msa0661870 | Msa0777790 | 0.828118 | 1.073886e-54 | -8.615850e-47 |
| Msa0663810 | Msa0777790 | 0.800233 | 1.586555e-48 | -8.615850e-47 |
| Msa0678930 | Msa0777790 | 0.806373 | 8.488053e-50 | -8.615850e-47 |
| Msa0680070 | Msa0777790 | 0.809336 | 1.990030e-50 | -8.615850e-47 |
| Msa0688270 | Msa0777790 | 0.818570 | 1.829429e-52 | -8.615850e-47 |
| Msa0693380 | Msa0777790 | 0.820662 | 6.093919e-53 | -8.615850e-47 |
| Msa0697030 | Msa0777790 | 0.808416 | 3.130906e-50 | -8.615850e-47 |
| Msa0697060 | Msa0777790 | 0.829484 | 5.017694e-55 | -8.615850e-47 |
| Msa0701900 | Msa0777790 | 0.803439 | 3.484801e-49 | -8.615850e-47 |
| Msa0726140 | Msa0777790 | 0.807346 | 5.286134e-50 | -8.615850e-47 |
| Msa0735170 | Msa0777790 | 0.806895 | 6.587912e-50 | -8.615850e-47 |
| Msa0736000 | Msa0777790 | 0.922601 | 7.955893e-89 | -8.615850e-47 |
| Msa0736060 | Msa0777790 | 0.820537 | 6.509997e-53 | -8.615850e-47 |
| Msa0736210 | Msa0777790 | 0.801527 | 8.634877e-49 | -8.615850e-47 |
| Msa0745790 | Msa0777790 | 0.808810 | 2.579483e-50 | -8.615850e-47 |
| Msa0759410 | Msa0777790 | 0.812724 | 3.670560e-51 | -8.615850e-47 |
| Msa0762360 | Msa0777790 | 0.820917 | 5.322910e-53 | -8.615850e-47 |
| Msa0766630 | Msa0777790 | 0.859201 | 4.870704e-63 | -8.615850e-47 |
| Msa0775190 | Msa0777790 | 0.802334 | 5.892522e-49 | -8.615850e-47 |
| Msa0777790 | Msa0777850 | 0.953585 | 1.984470e-111 | -8.615850e-47 |
| Msa0777790 | Msa0777930 | 0.837149 | 6.162355e-57 | -8.615850e-47 |
| Msa0777790 | Msa0789250 | 0.817669 | 2.925668e-52 | -8.615850e-47 |
| Msa0777790 | Msa0801760 | 0.808914 | 2.450777e-50 | -8.615850e-47 |
| Msa0777790 | Msa0811080 | 0.824357 | 8.434512e-54 | -8.615850e-47 |
| Msa0777790 | Msa0814940 | 0.807815 | 4.203221e-50 | -8.615850e-47 |
| Msa0777790 | Msa0815080 | 0.876708 | 1.126260e-68 | -8.615850e-47 |
| Msa0777790 | Msa0815120 | 0.821219 | 4.536079e-53 | -8.615850e-47 |
| Msa0777790 | Msa0815140 | 0.891228 | 4.809962e-74 | -8.615850e-47 |
| Msa0777790 | Msa0815180 | 0.800144 | 1.653920e-48 | -8.615850e-47 |
| Msa0777790 | Msa0820840 | 0.819096 | 1.389567e-52 | -8.615850e-47 |
| Msa0777790 | Msa0824660 | 0.803652 | 3.146657e-49 | -8.615850e-47 |
| Msa0777790 | Msa0861120 | 0.814649 | 1.383783e-51 | -8.615850e-47 |
| Msa0777790 | Msa0880140 | 0.842444 | 2.576361e-58 | -8.615850e-47 |
| Msa0777790 | Msa0885280 | 0.815686 | 8.141595e-52 | -8.615850e-47 |
| Msa0777790 | Msa0885290 | 0.808847 | 2.532117e-50 | -8.615850e-47 |
| Msa0777790 | Msa0897880 | 0.801067 | 1.072431e-48 | -8.615850e-47 |
| Msa0777790 | Msa0898380 | 0.811755 | 5.972762e-51 | -8.615850e-47 |
| Msa0777790 | Msa0907070 | 0.823475 | 1.357915e-53 | -8.615850e-47 |
| Msa0777790 | Msa0907260 | 0.829729 | 4.373209e-55 | -8.615850e-47 |
| Msa0777790 | Msa0909120 | 0.826825 | 2.193056e-54 | -8.615850e-47 |
| Msa0777790 | Msa0909140 | 0.838984 | 2.078414e-57 | -8.615850e-47 |
| Msa0777790 | Msa0935910 | 0.839259 | 1.763734e-57 | -8.615850e-47 |
| Msa0777790 | Msa0938210 | 0.803168 | 3.965794e-49 | -8.615850e-47 |
| Msa0777790 | Msa0938220 | 0.805520 | 1.282779e-49 | -8.615850e-47 |
| Msa0777790 | Msa0942200 | 0.809255 | 2.071525e-50 | -8.615850e-47 |
| Msa0777790 | Msa0956270 | 0.810712 | 1.006003e-50 | -8.615850e-47 |
| Msa0777790 | Msa0959770 | 0.822293 | 2.559348e-53 | -8.615850e-47 |
| Msa0777790 | Msa0969450 | 0.821290 | 4.367445e-53 | -8.615850e-47 |
| Msa0777790 | Msa0969520 | 0.808239 | 3.415045e-50 | -8.615850e-47 |
| Msa0777790 | Msa0975220 | 0.810565 | 1.082088e-50 | -8.615850e-47 |
| Msa0777790 | Msa0983090 | 0.806235 | 9.077422e-50 | -8.615850e-47 |
| Msa0777790 | Msa1014540 | 0.852419 | 4.674031e-61 | -8.615850e-47 |
| Msa0777790 | Msa1023950 | 0.812760 | 3.605663e-51 | -8.615850e-47 |
| Msa0777790 | Msa1024240 | 0.812785 | 3.559159e-51 | -8.615850e-47 |
| Msa0777790 | Msa1030970 | 0.830235 | 3.292664e-55 | -8.615850e-47 |
| Msa0777790 | Msa1041730 | 0.800851 | 1.187387e-48 | -8.615850e-47 |
| Msa0777790 | Msa1070010 | 0.802198 | 6.286281e-49 | -8.615850e-47 |
| Msa0777790 | Msa1075220 | -0.808392 | 3.167253e-50 | -8.615850e-47 |
| Msa0777790 | Msa1075540 | 0.813301 | 2.742683e-51 | -8.615850e-47 |
| Msa0777790 | Msa1079180 | 0.811316 | 7.442319e-51 | -8.615850e-47 |
| Msa0777790 | Msa1081590 | 0.809156 | 2.174493e-50 | -8.615850e-47 |
| Msa0777790 | Msa1082500 | 0.838802 | 2.316233e-57 | -8.615850e-47 |
| Msa0777790 | Msa1085200 | 0.802875 | 4.558943e-49 | -8.615850e-47 |
| Msa0777790 | Msa1085300 | 0.807928 | 3.977375e-50 | -8.615850e-47 |
| Msa0777790 | Msa1136090 | 0.825645 | 4.186289e-54 | -8.615850e-47 |
| Msa0777790 | Msa1137690 | 0.806645 | 7.438046e-50 | -8.615850e-47 |
| Msa0777790 | Msa1160670 | 0.843368 | 1.462934e-58 | -8.615850e-47 |
| Msa0777790 | Msa1162550 | -0.808004 | 3.832347e-50 | -8.615850e-47 |
| Msa0777790 | Msa1165540 | 0.802755 | 4.825753e-49 | -8.615850e-47 |
| Msa0777790 | Msa1179770 | 0.801281 | 9.695473e-49 | -8.615850e-47 |
| Msa0777790 | Msa1187940 | 0.813795 | 2.136050e-51 | -8.615850e-47 |
| Msa0777790 | Msa1226660 | 0.800397 | 1.469200e-48 | -8.615850e-47 |
| Msa0777790 | Msa1228590 | 0.816531 | 5.271676e-52 | -8.615850e-47 |
| Msa0777790 | Msa1242220 | 0.820102 | 8.188590e-53 | -8.615850e-47 |
| Msa0777790 | Msa1244250 | 0.803075 | 4.143764e-49 | -8.615850e-47 |
| Msa0777790 | Msa1253000 | 0.803328 | 3.674334e-49 | -8.615850e-47 |
| Msa0777790 | Msa1263300 | 0.803783 | 2.956757e-49 | -8.615850e-47 |
| Msa0777790 | Msa1271290 | 0.826153 | 3.171739e-54 | -8.615850e-47 |
| Msa0777790 | Msa1283860 | 0.840677 | 7.529851e-58 | -8.615850e-47 |
| Msa0777790 | Msa1284680 | 0.829675 | 4.508857e-55 | -8.615850e-47 |
| Msa0777790 | Msa1298260 | 0.803298 | 3.725950e-49 | -8.615850e-47 |
| Msa0777790 | Msa1306850 | 0.807046 | 6.119651e-50 | -8.615850e-47 |
| Msa0777790 | Msa1307980 | 0.811197 | 7.896085e-51 | -8.615850e-47 |
| Msa0777790 | Msa1308380 | 0.815600 | 8.508994e-52 | -8.615850e-47 |
| Msa0777790 | Msa1322890 | 0.833750 | 4.457657e-56 | -8.615850e-47 |
| Msa0777790 | Msa1324550 | 0.805865 | 1.086112e-49 | -8.615850e-47 |
| Msa0777790 | Msa1324780 | 0.847537 | 1.085960e-59 | -8.615850e-47 |
| Msa0777790 | Msa1342840 | 0.800669 | 1.292863e-48 | -8.615850e-47 |
| Msa0777790 | Msa1357530 | 0.803522 | 3.348485e-49 | -8.615850e-47 |
| Msa0777790 | Msa1360060 | 0.808122 | 3.615987e-50 | -8.615850e-47 |
| Msa0777790 | Msa1372760 | 0.822687 | 2.073510e-53 | -8.615850e-47 |
| Msa0777790 | Msa1372980 | 0.801402 | 9.159759e-49 | -8.615850e-47 |
| Msa0777790 | Msa1373010 | 0.826891 | 2.114620e-54 | -8.615850e-47 |
| Msa0777790 | Msa1373030 | 0.820534 | 6.520924e-53 | -8.615850e-47 |
| Msa0777790 | Msa1384350 | 0.811373 | 7.232750e-51 | -8.615850e-47 |
| Msa0777790 | Msa1392260 | 0.812344 | 4.444267e-51 | -8.615850e-47 |
| Msa0777790 | Msa1397610 | 0.805208 | 1.491638e-49 | -8.615850e-47 |
| Msa0777790 | Msa1397860 | 0.818094 | 2.345517e-52 | -8.615850e-47 |
| Msa0777790 | Msa1409870 | 0.810067 | 1.385990e-50 | -8.615850e-47 |
| Msa0777790 | Msa1411020 | 0.807478 | 4.957834e-50 | -8.615850e-47 |
| Msa0777790 | Msa1420140 | 0.803990 | 2.677415e-49 | -8.615850e-47 |
| Msa0777790 | Msa1420290 | 0.801948 | 7.077421e-49 | -8.615850e-47 |
| Msa0777790 | Msa1420490 | 0.801033 | 1.089818e-48 | -8.615850e-47 |
| Msa0777790 | Msa1423390 | 0.801522 | 8.653786e-49 | -8.615850e-47 |
| Msa0777790 | Msa1424290 | 0.801990 | 6.936562e-49 | -8.615850e-47 |
| Msa0777790 | Msa1424450 | 0.806148 | 9.469307e-50 | -8.615850e-47 |
| Msa0777790 | Msa1429900 | 0.812673 | 3.766200e-51 | -8.615850e-47 |
| Msa0777790 | Msa1434350 | 0.803467 | 3.437265e-49 | -8.615850e-47 |
| Msa0777790 | Msa1438250 | 0.875942 | 2.069603e-68 | -8.615850e-47 |
| Msa0777790 | Msa1439320 | 0.804745 | 1.864152e-49 | -8.615850e-47 |
| Msa0777790 | Msa1440370 | 0.800528 | 1.381768e-48 | -8.615850e-47 |
| Msa0777790 | Msa1440810 | 0.801982 | 6.963607e-49 | -8.615850e-47 |
| Msa0777790 | Msa1453720 | 0.805128 | 1.550193e-49 | -8.615850e-47 |
| Msa0777790 | Msa1454120 | 0.800557 | 1.363072e-48 | -8.615850e-47 |
| Msa0777790 | Msa1460050 | 0.801503 | 8.732504e-49 | -8.615850e-47 |
| Msa0777790 | Msa1460240 | 0.802786 | 4.755697e-49 | -8.615850e-47 |
| Msa0777790 | Msa1464940 | 0.812792 | 3.546772e-51 | -8.615850e-47 |
| Msa0777790 | Msa1466540 | 0.806153 | 9.446156e-50 | -8.615850e-47 |
| Msa0142220 | Msa0777790 | 0.812231 | 4.705132e-51 | -8.615850e-47 |
| Msa0145250 | Msa0777790 | 0.806929 | 6.478186e-50 | -8.615850e-47 |
| Msa0153910 | Msa0777790 | 0.826416 | 2.745815e-54 | -8.615850e-47 |
| Msa0157290 | Msa0777790 | 0.843433 | 1.405699e-58 | -8.615850e-47 |
| Msa0166870 | Msa0777790 | 0.804326 | 2.279300e-49 | -8.615850e-47 |
| Msa0188830 | Msa0777790 | 0.808741 | 2.668132e-50 | -8.615850e-47 |
| Msa0200260 | Msa0777790 | 0.818875 | 1.559637e-52 | -8.615850e-47 |
| Msa0212990 | Msa0777790 | 0.806670 | 7.347674e-50 | -8.615850e-47 |
| Msa0214300 | Msa0777790 | 0.820000 | 8.641746e-53 | -8.615850e-47 |
| Msa0218270 | Msa0777790 | 0.800141 | 1.656222e-48 | -8.615850e-47 |
| Msa0220580 | Msa0777790 | 0.802772 | 4.787300e-49 | -8.615850e-47 |
| Msa0220740 | Msa0777790 | 0.802432 | 5.625143e-49 | -8.615850e-47 |
| Msa0233300 | Msa0777790 | 0.810474 | 1.132388e-50 | -8.615850e-47 |
| Msa0366970 | Msa0777790 | 0.808797 | 2.595823e-50 | -8.615850e-47 |
| Msa0373160 | Msa0777790 | 0.800995 | 1.109320e-48 | -8.615850e-47 |
| Msa0397750 | Msa0777790 | 0.816834 | 4.508182e-52 | -8.615850e-47 |
| Msa0402290 | Msa0777790 | 0.831300 | 1.805332e-55 | -8.615850e-47 |
| Msa0406120 | Msa0777790 | 0.801075 | 1.068342e-48 | -8.615850e-47 |
| Msa0414230 | Msa0777790 | 0.804684 | 1.919426e-49 | -8.615850e-47 |
| Msa0417100 | Msa0777790 | 0.832358 | 9.893753e-56 | -8.615850e-47 |
| Msa0431690 | Msa0777790 | 0.808704 | 2.717188e-50 | -8.615850e-47 |
| Msa0432300 | Msa0777790 | 0.808765 | 2.636893e-50 | -8.615850e-47 |
| Msa0437990 | Msa0777790 | 0.823421 | 1.398054e-53 | -8.615850e-47 |
| Msa0440750 | Msa0777790 | 0.801809 | 7.555335e-49 | -8.615850e-47 |
| Msa0452620 | Msa0777790 | 0.809727 | 1.640316e-50 | -8.615850e-47 |
| Msa0458090 | Msa0777790 | 0.801417 | 9.092190e-49 | -8.615850e-47 |
| Msa0243100 | Msa0777790 | 0.820426 | 6.904289e-53 | -8.615850e-47 |
| Msa0244860 | Msa0777790 | 0.800443 | 1.437545e-48 | -8.615850e-47 |
| Msa0258760 | Msa0777790 | 0.803504 | 3.377999e-49 | -8.615850e-47 |
| Msa0283450 | Msa0777790 | 0.811616 | 6.405301e-51 | -8.615850e-47 |
| Msa0285450 | Msa0777790 | 0.805900 | 1.067643e-49 | -8.615850e-47 |
| Msa0288100 | Msa0777790 | 0.815209 | 1.039658e-51 | -8.615850e-47 |
| Msa0291540 | Msa0777790 | 0.813875 | 2.051059e-51 | -8.615850e-47 |
| Msa0297960 | Msa0777790 | 0.817047 | 4.038890e-52 | -8.615850e-47 |
| Msa0309020 | Msa0777790 | 0.804707 | 1.897998e-49 | -8.615850e-47 |
| Msa0326520 | Msa0777790 | 0.802765 | 4.803896e-49 | -8.615850e-47 |
| Msa0330340 | Msa0777790 | 0.801377 | 9.267681e-49 | -8.615850e-47 |
| Msa0345970 | Msa0777790 | 0.803216 | 3.875272e-49 | -8.615850e-47 |
| Msa0355220 | Msa0777790 | 0.819820 | 9.502570e-53 | -8.615850e-47 |
| Msa0484780 | Msa0777790 | 0.830205 | 3.347817e-55 | -8.615850e-47 |
| Msa0502270 | Msa0777790 | 0.842638 | 2.287803e-58 | -8.615850e-47 |
| Msa0506490 | Msa0777790 | 0.803303 | 3.717794e-49 | -8.615850e-47 |
| Msa0507680 | Msa0777790 | 0.801707 | 7.929799e-49 | -8.615850e-47 |
| Msa0512900 | Msa0777790 | 0.817667 | 2.928404e-52 | -8.615850e-47 |
| Msa0532350 | Msa0777790 | 0.821839 | 3.261387e-53 | -8.615850e-47 |
| Msa0545200 | Msa0777790 | 0.808670 | 2.763527e-50 | -8.615850e-47 |
| Msa0545210 | Msa0777790 | 0.809023 | 2.321734e-50 | -8.615850e-47 |
| Msa0558640 | Msa0777790 | 0.832142 | 1.119183e-55 | -8.615850e-47 |
| Msa0558690 | Msa0777790 | 0.807594 | 4.683017e-50 | -8.615850e-47 |
| Msa0563840 | Msa0777790 | 0.801620 | 8.263350e-49 | -8.615850e-47 |
| Msa0569500 | Msa0777790 | 0.814995 | 1.159345e-51 | -8.615850e-47 |
| Msa0598780 | Msa0777790 | 0.817639 | 2.970511e-52 | -8.615850e-47 |
| Msa0599890 | Msa0777790 | 0.802597 | 5.201490e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0777790 | MtrunA17_Chr5g0433361 | 79.797 | 886 | 115 | 6 | 15 | 889 | 51 | 883 | 0.0 | 1422 |
| Msa0777790 | MtrunA17_Chr5g0433471 | 55.462 | 952 | 259 | 14 | 15 | 886 | 43 | 909 | 0.0 | 941 |
| Msa0777790 | MtrunA17_Chr3g0109541 | 48.194 | 969 | 337 | 18 | 15 | 899 | 36 | 923 | 0.0 | 808 |
| Msa0777790 | MtrunA17_Chr5g0433321 | 47.466 | 967 | 335 | 18 | 7 | 901 | 32 | 897 | 0.0 | 789 |
| Msa0777790 | MtrunA17_Chr5g0433371 | 47.614 | 985 | 332 | 19 | 7 | 902 | 33 | 922 | 0.0 | 783 |
| Msa0777790 | MtrunA17_Chr5g0433421 | 64.959 | 488 | 118 | 6 | 433 | 905 | 561 | 1010 | 0.0 | 597 |
| Msa0777790 | MtrunA17_Chr5g0433421 | 58.824 | 408 | 110 | 8 | 15 | 419 | 38 | 390 | 1.04e-138 | 439 |
| Msa0777790 | MtrunA17_Chr5g0433351 | 63.941 | 477 | 123 | 7 | 15 | 486 | 38 | 470 | 0.0 | 571 |
| Msa0777790 | MtrunA17_Chr5g0433511 | 62.288 | 472 | 109 | 7 | 433 | 889 | 495 | 912 | 1.35e-175 | 533 |
| Msa0777790 | MtrunA17_Chr5g0433511 | 57.720 | 421 | 116 | 8 | 15 | 419 | 33 | 407 | 3.92e-137 | 432 |
| Msa0777790 | MtrunA17_Chr3g0094211 | 33.438 | 957 | 453 | 27 | 15 | 885 | 39 | 897 | 1.96e-153 | 477 |
| Msa0777790 | MtrunA17_Chr8g0375181 | 34.792 | 937 | 449 | 26 | 15 | 877 | 104 | 952 | 1.15e-145 | 478 |
| Msa0777790 | MtrunA17_Chr8g0375151 | 35.059 | 927 | 440 | 27 | 23 | 877 | 8 | 844 | 3.20e-144 | 473 |
| Msa0777790 | MtrunA17_Chr8g0375191 | 34.208 | 915 | 454 | 27 | 19 | 876 | 51 | 874 | 2.43e-139 | 459 |
| Msa0777790 | MtrunA17_Chr3g0109551 | 43.404 | 470 | 209 | 6 | 433 | 877 | 499 | 936 | 2.78e-117 | 384 |
| Msa0777790 | MtrunA17_Chr3g0109551 | 37.947 | 419 | 209 | 7 | 15 | 429 | 34 | 405 | 2.49e-70 | 253 |
| Msa0777790 | MtrunA17_Chr5g0433341 | 84.324 | 185 | 27 | 2 | 523 | 706 | 2 | 185 | 1.81e-102 | 316 |
| Msa0777790 | MtrunA17_Chr5g0433331 | 67.179 | 195 | 37 | 2 | 711 | 905 | 1 | 168 | 2.17e-77 | 249 |
| Msa0777790 | MtrunA17_Chr8g0343741 | 36.095 | 338 | 171 | 10 | 523 | 851 | 962 | 1263 | 2.36e-46 | 181 |
| Msa0777790 | MtrunA17_Chr5g0422511 | 34.154 | 325 | 185 | 6 | 531 | 854 | 455 | 751 | 1.44e-41 | 164 |
| Msa0777790 | MtrunA17_Chr1g0173701 | 33.904 | 292 | 164 | 6 | 565 | 854 | 108 | 372 | 5.86e-40 | 152 |
| Msa0777790 | MtrunA17_Chr2g0334291 | 28.649 | 555 | 313 | 17 | 326 | 855 | 1577 | 2073 | 1.27e-39 | 159 |
| Msa0777790 | MtrunA17_Chr5g0400101 | 31.361 | 338 | 189 | 10 | 559 | 891 | 641 | 940 | 3.11e-34 | 142 |
| Msa0777790 | MtrunA17_Chr3g0117771 | 35.897 | 234 | 87 | 6 | 15 | 245 | 124 | 297 | 1.15e-30 | 123 |
| Msa0777790 | MtrunA17_Chr7g0257921 | 37.063 | 286 | 130 | 12 | 532 | 795 | 348 | 605 | 4.04e-29 | 124 |
| Msa0777790 | MtrunA17_Chr8g0375861 | 27.711 | 415 | 241 | 13 | 4 | 414 | 31 | 390 | 1.78e-28 | 124 |
| Msa0777790 | MtrunA17_Chr8g0375861 | 42.857 | 140 | 70 | 5 | 494 | 632 | 529 | 659 | 1.46e-21 | 101 |
| Msa0777790 | MtrunA17_Chr8g0375871 | 27.711 | 415 | 241 | 13 | 4 | 414 | 31 | 390 | 1.97e-28 | 123 |
| Msa0777790 | MtrunA17_Chr8g0375871 | 42.857 | 140 | 70 | 5 | 494 | 632 | 529 | 659 | 1.37e-21 | 101 |
| Msa0777790 | MtrunA17_Chr1g0165651 | 32.414 | 290 | 163 | 11 | 525 | 795 | 624 | 899 | 1.80e-25 | 113 |
| Msa0777790 | MtrunA17_Chr5g0435821 | 41.985 | 131 | 47 | 2 | 747 | 877 | 12 | 113 | 3.21e-24 | 108 |
| Msa0777790 | MtrunA17_Chr5g0394941 | 31.469 | 286 | 152 | 10 | 559 | 823 | 541 | 803 | 1.87e-21 | 100 |
| Msa0777790 | MtrunA17_Chr2g0304151 | 31.469 | 286 | 152 | 10 | 559 | 823 | 541 | 803 | 1.89e-21 | 100 |
| Msa0777790 | MtrunA17_Chr1g0165031 | 25.891 | 533 | 311 | 23 | 300 | 799 | 892 | 1373 | 1.44e-19 | 95.1 |
| Msa0777790 | MtrunA17_Chr4g0030281 | 43.243 | 111 | 52 | 2 | 15 | 125 | 329 | 428 | 5.46e-18 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0777790 | AT1G65810.3 | 44.394 | 874 | 384 | 19 | 15 | 865 | 43 | 837 | 0.0 | 650 |
| Msa0777790 | AT1G65810.2 | 44.394 | 874 | 384 | 19 | 15 | 865 | 43 | 837 | 0.0 | 650 |
| Msa0777790 | AT1G65810.1 | 44.394 | 874 | 384 | 19 | 15 | 865 | 43 | 837 | 0.0 | 650 |
| Msa0777790 | AT1G65780.1 | 39.172 | 942 | 403 | 19 | 15 | 883 | 32 | 876 | 0.0 | 582 |
| Msa0777790 | AT5G37140.1 | 43.785 | 724 | 320 | 18 | 213 | 894 | 12 | 690 | 1.10e-180 | 538 |
| Msa0777790 | AT5G52090.1 | 43.994 | 691 | 313 | 18 | 218 | 870 | 1 | 655 | 4.30e-178 | 531 |
| Msa0777790 | AT5G37150.1 | 42.672 | 696 | 323 | 17 | 213 | 870 | 161 | 818 | 3.07e-172 | 521 |
| Msa0777790 | AT5G37150.1 | 39.831 | 118 | 58 | 4 | 19 | 136 | 32 | 136 | 3.84e-13 | 73.9 |
| Msa0777790 | AT4G05540.1 | 43.299 | 679 | 291 | 16 | 214 | 837 | 50 | 689 | 1.66e-165 | 499 |
| Msa0777790 | AT5G37165.1 | 46.171 | 444 | 197 | 11 | 447 | 881 | 1 | 411 | 2.02e-121 | 375 |
| Msa0777790 | AT5G37030.1 | 54.259 | 317 | 120 | 2 | 552 | 867 | 344 | 636 | 1.89e-111 | 356 |
| Msa0777790 | AT5G37030.1 | 49.359 | 156 | 74 | 3 | 272 | 425 | 198 | 350 | 3.83e-29 | 124 |
| Msa0777790 | AT4G15570.2 | 27.627 | 590 | 317 | 19 | 276 | 849 | 167 | 662 | 2.89e-48 | 184 |
| Msa0777790 | AT4G15570.4 | 27.627 | 590 | 317 | 19 | 276 | 849 | 167 | 662 | 2.89e-48 | 184 |
| Msa0777790 | AT4G15570.3 | 27.627 | 590 | 317 | 19 | 276 | 849 | 256 | 751 | 3.95e-48 | 184 |
| Msa0777790 | AT4G15570.1 | 27.627 | 590 | 317 | 19 | 276 | 849 | 256 | 751 | 3.95e-48 | 184 |
| Msa0777790 | AT2G19120.1 | 35.030 | 334 | 180 | 9 | 523 | 851 | 742 | 1043 | 1.21e-45 | 178 |
| Msa0777790 | AT4G30100.2 | 33.628 | 339 | 186 | 10 | 523 | 855 | 905 | 1210 | 2.89e-42 | 168 |
| Msa0777790 | AT4G30100.1 | 33.628 | 339 | 186 | 10 | 523 | 855 | 905 | 1210 | 2.89e-42 | 168 |
| Msa0777790 | AT5G37160.1 | 39.827 | 231 | 108 | 4 | 214 | 414 | 180 | 409 | 1.85e-39 | 153 |
| Msa0777790 | AT1G16800.3 | 27.106 | 546 | 329 | 17 | 326 | 851 | 1427 | 1923 | 9.14e-38 | 154 |
| Msa0777790 | AT1G16800.2 | 27.106 | 546 | 329 | 17 | 326 | 851 | 1497 | 1993 | 9.76e-38 | 154 |
| Msa0777790 | AT1G16800.1 | 27.106 | 546 | 329 | 17 | 326 | 851 | 1385 | 1881 | 9.89e-38 | 154 |
| Msa0777790 | AT5G47010.1 | 30.259 | 347 | 196 | 10 | 559 | 897 | 653 | 961 | 1.57e-33 | 140 |
| Msa0777790 | AT2G03270.1 | 35.971 | 278 | 150 | 13 | 530 | 795 | 339 | 600 | 9.81e-26 | 114 |
| Msa0777790 | AT5G35970.1 | 34.146 | 287 | 156 | 12 | 531 | 798 | 638 | 910 | 1.07e-24 | 111 |
| Msa0777790 | AT1G05460.1 | 30.420 | 286 | 156 | 10 | 559 | 823 | 542 | 805 | 4.02e-21 | 100 |
| Msa0777790 | AT1G05460.2 | 30.877 | 285 | 156 | 9 | 559 | 823 | 542 | 805 | 4.14e-21 | 100 |
| Msa0777790 | AT2G38770.1 | 33.203 | 256 | 144 | 11 | 559 | 799 | 1120 | 1363 | 2.10e-18 | 91.7 |
| Msa0777790 | AT1G08840.2 | 27.969 | 261 | 140 | 9 | 560 | 795 | 1037 | 1274 | 1.48e-14 | 79.0 |
| Msa0777790 | AT1G08840.4 | 27.969 | 261 | 140 | 9 | 560 | 795 | 1050 | 1287 | 1.56e-14 | 79.0 |
| Msa0777790 | AT1G08840.3 | 27.969 | 261 | 140 | 9 | 560 | 795 | 1053 | 1290 | 1.59e-14 | 79.0 |
| Msa0777790 | AT1G08840.1 | 27.969 | 261 | 140 | 9 | 560 | 795 | 1018 | 1255 | 1.62e-14 | 79.0 |
Find 150 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAGTCATTTAAGCTTTC+AGG | 0.127572 | 5_2:+57176352 | None:intergenic |
| AACATTCAAACATATTAATT+TGG | 0.175529 | 5_2:+57173643 | None:intergenic |
| TTTGAATACAAGAAGATATT+TGG | 0.191015 | 5_2:-57175270 | Msa0777790:CDS |
| ATGCTGATATCAAACTTATA+TGG | 0.207233 | 5_2:-57175668 | Msa0777790:CDS |
| TTAGTCTCCCATCCAGTATT+TGG | 0.221963 | 5_2:+57175363 | None:intergenic |
| ACATTCTTTAAGACCTTAAA+AGG | 0.222106 | 5_2:-57177133 | Msa0777790:intron |
| TTAGGTGACATTGTGCTATT+TGG | 0.241240 | 5_2:-57175477 | Msa0777790:CDS |
| TGCACTGGCTTCACCTTTGC+TGG | 0.242919 | 5_2:+57174910 | None:intergenic |
| GTAAATGTTCGTTCTGTTGA+TGG | 0.259767 | 5_2:-57174111 | Msa0777790:CDS |
| TGCTCAAGTTTATGAAATTC+AGG | 0.269725 | 5_2:-57174178 | Msa0777790:CDS |
| TCATGTGTGAGGTTGATTTC+AGG | 0.280798 | 5_2:+57176017 | None:intergenic |
| CTCATGTCAATGTTAAATTT+AGG | 0.292464 | 5_2:+57175027 | None:intergenic |
| TCTGATGAAGTTGAAAATAT+TGG | 0.296974 | 5_2:-57176424 | Msa0777790:CDS |
| ACGGCGTTTAGGAGGGAAAA+TGG | 0.297803 | 5_2:-57173707 | Msa0777790:CDS |
| ATTCTTCCAGTCGTTGAATC+TGG | 0.301086 | 5_2:+57173749 | None:intergenic |
| AGATACTGTCTTTGGATATT+AGG | 0.305787 | 5_2:-57173901 | Msa0777790:CDS |
| TCATAAACTTGAGCATTATA+TGG | 0.306286 | 5_2:+57174186 | None:intergenic |
| AGGCGATACGGTAGGGGTTT+TGG | 0.316658 | 5_2:+57176323 | None:intergenic |
| CAATGCTTTCATCCAAATAC+TGG | 0.327523 | 5_2:-57175375 | Msa0777790:CDS |
| AGCTTGAAACAGCATCTTCT+TGG | 0.329857 | 5_2:+57175715 | None:intergenic |
| GATCATGATACATATGGTTT+AGG | 0.333976 | 5_2:-57175495 | Msa0777790:CDS |
| ATAGCAGACCAATGTGAATT+TGG | 0.341801 | 5_2:-57174673 | Msa0777790:CDS |
| AATATCCATCTTCATGCAAT+TGG | 0.341818 | 5_2:+57176183 | None:intergenic |
| ATGAAGGTAGATCGACTATC+TGG | 0.349186 | 5_2:+57175780 | None:intergenic |
| TTTGTTAGCAAATTTCTTCA+TGG | 0.353735 | 5_2:+57175311 | None:intergenic |
| ATGTCTCATTTCATTGGAAA+TGG | 0.356476 | 5_2:-57175190 | Msa0777790:CDS |
| CTTGATTTGCTAAGGTCTCT+TGG | 0.362091 | 5_2:-57175147 | Msa0777790:CDS |
| AAGGTCTCTTGGAAATTCCT+TGG | 0.364902 | 5_2:-57175136 | Msa0777790:CDS |
| TGCAAAATTGCAGTATTAGT+TGG | 0.368307 | 5_2:+57175558 | None:intergenic |
| TAATCAACAGTGACTCTGTT+TGG | 0.369827 | 5_2:-57173864 | Msa0777790:CDS |
| CCTAAACGCCGTTTCTTGAA+TGG | 0.370619 | 5_2:+57173718 | None:intergenic |
| CCATTCAAGAAACGGCGTTT+AGG | 0.370861 | 5_2:-57173718 | Msa0777790:CDS |
| AGGTCTCTTGGAAATTCCTT+GGG | 0.371531 | 5_2:-57175135 | Msa0777790:CDS |
| ACATTATTGATCTCACAAAA+AGG | 0.373241 | 5_2:+57176538 | None:intergenic |
| TGCTGATATCAAACTTATAT+GGG | 0.374218 | 5_2:-57175667 | Msa0777790:CDS |
| CATTTGTTGTCATGTTCATA+AGG | 0.376096 | 5_2:+57176056 | None:intergenic |
| GCCAACATGTCTCATTTCAT+TGG | 0.376355 | 5_2:-57175196 | Msa0777790:CDS |
| TCATTGCTTTCACACACATT+AGG | 0.388248 | 5_2:-57176375 | Msa0777790:CDS |
| AATATTCATCTTCATGCATT+CGG | 0.392803 | 5_2:+57176126 | None:intergenic |
| TCACTTGATCATGATACATA+TGG | 0.393125 | 5_2:-57175501 | Msa0777790:CDS |
| TATCTGATGCTCCCATTGTC+AGG | 0.393935 | 5_2:-57174531 | Msa0777790:CDS |
| AAGAGTACATTTCTCCTTCA+AGG | 0.396644 | 5_2:+57174485 | None:intergenic |
| AGTTATTGATGCTAAGAATA+GGG | 0.406528 | 5_2:-57173833 | Msa0777790:CDS |
| ATATCTACCGTGAGATCTAA+TGG | 0.406558 | 5_2:-57174057 | Msa0777790:CDS |
| CATGTGTGAGGTTGATTTCA+GGG | 0.407399 | 5_2:+57176018 | None:intergenic |
| TGTTGGCATGTGTGTGTGTA+AGG | 0.413125 | 5_2:+57175212 | None:intergenic |
| GCTTGAAACAGCATCTTCTT+GGG | 0.426070 | 5_2:+57175716 | None:intergenic |
| TAGTTATTGATGCTAAGAAT+AGG | 0.429708 | 5_2:-57173834 | Msa0777790:CDS |
| AAGTCTGAAGAACATGGTTC+AGG | 0.431895 | 5_2:-57174410 | Msa0777790:CDS |
| GTTGTCTCTCATCTCCGATT+AGG | 0.431949 | 5_2:+57174803 | None:intergenic |
| AATATAATTAAAACAGTGTT+GGG | 0.435420 | 5_2:-57175995 | Msa0777790:CDS |
| CTCCACCGTTGCATCCTAAT+CGG | 0.437172 | 5_2:-57174817 | Msa0777790:CDS |
| TCGGTTGCATAGGTTAGTTA+TGG | 0.440947 | 5_2:-57175526 | Msa0777790:CDS |
| GTGGCTGACTTAAACGTCTC+TGG | 0.444543 | 5_2:+57176646 | None:intergenic |
| GGAAATTATAAACCTGTGTC+AGG | 0.444557 | 5_2:-57176403 | Msa0777790:CDS |
| GCTAAGGGTAAAGAGCAATT+TGG | 0.445056 | 5_2:-57174442 | Msa0777790:CDS |
| CTTGATTACCTTCTTAACAT+AGG | 0.451230 | 5_2:+57176303 | None:intergenic |
| AGAAAGACATTGACAAGGCC+TGG | 0.454988 | 5_2:+57175423 | None:intergenic |
| TTCGCACGGGAATAAGCTAA+TGG | 0.459341 | 5_2:+57174573 | None:intergenic |
| TACAGTTCCATCATGACATA+TGG | 0.461642 | 5_2:-57176465 | Msa0777790:CDS |
| GACATTGTGCTATTTGGAAA+TGG | 0.464393 | 5_2:-57175471 | Msa0777790:CDS |
| ATATGGGGACCACCAGGGAC+AGG | 0.468887 | 5_2:-57175651 | Msa0777790:CDS |
| TAGCTTTCTTCCCTGACAAT+GGG | 0.469265 | 5_2:+57174520 | None:intergenic |
| ATCATCCAATTGCATGAAGA+TGG | 0.477710 | 5_2:-57176188 | Msa0777790:CDS |
| GTTTGAAAGACTTGTAATGT+TGG | 0.480465 | 5_2:-57174641 | Msa0777790:CDS |
| AACAATTCCATTACAGCTGT+CGG | 0.482727 | 5_2:-57174842 | Msa0777790:CDS |
| TGGAGACCCGACAGCTGTAA+TGG | 0.484216 | 5_2:+57174835 | None:intergenic |
| AAGGTCTTAAAGAATGTCTC+GGG | 0.484944 | 5_2:+57177139 | None:intergenic |
| GAATATAATTAAAACAGTGT+TGG | 0.489127 | 5_2:-57175996 | Msa0777790:CDS |
| TTCAAGCTCTTGATTTGCTA+AGG | 0.490192 | 5_2:-57175155 | Msa0777790:CDS |
| TGCTATTTGGAAATGGTAAG+AGG | 0.490292 | 5_2:-57175464 | Msa0777790:CDS |
| AGCTATGTTAATAAAAGAAT+AGG | 0.495035 | 5_2:+57174462 | None:intergenic |
| TTCAAGAAACGGCGTTTAGG+AGG | 0.495052 | 5_2:-57173715 | Msa0777790:CDS |
| AACAAATGTGGCTATGACTA+GGG | 0.495248 | 5_2:-57173998 | Msa0777790:CDS |
| GGAGTTCAGCAACTCTATCA+TGG | 0.495440 | 5_2:+57175332 | None:intergenic |
| TAAGGTCTTAAAGAATGTCT+CGG | 0.497141 | 5_2:+57177138 | None:intergenic |
| ATAATTAAAAGTCTTTATGA+AGG | 0.499892 | 5_2:-57174370 | Msa0777790:intron |
| CATGATGGAACTGTATGAAT+TGG | 0.504598 | 5_2:+57176473 | None:intergenic |
| TTTGAAAGACTTGTAATGTT+GGG | 0.506742 | 5_2:-57174640 | Msa0777790:CDS |
| CGGCGTTTAGGAGGGAAAAT+GGG | 0.506969 | 5_2:-57173706 | Msa0777790:CDS |
| TTGAGTCACCATTCAAGAAA+CGG | 0.508950 | 5_2:-57173726 | Msa0777790:CDS |
| TTAACATAGGCGATACGGTA+GGG | 0.510070 | 5_2:+57176316 | None:intergenic |
| GAACAAATGTGGCTATGACT+AGG | 0.512010 | 5_2:-57173999 | Msa0777790:CDS |
| TGTCAATGTTAAATTTAGGA+AGG | 0.513940 | 5_2:+57175031 | None:intergenic |
| CTTGAATTTGGCTTGCCCCA+AGG | 0.515997 | 5_2:+57175119 | None:intergenic |
| CCGTGCGAAGAGTTCTATGA+TGG | 0.516329 | 5_2:-57174559 | Msa0777790:CDS |
| ACCGTGAGATCTAATGGTAC+TGG | 0.518270 | 5_2:-57174051 | Msa0777790:CDS |
| TGGAGCACATGTCAATGTCC+TGG | 0.518568 | 5_2:+57175578 | None:intergenic |
| CCGTATCGCCTATGTTAAGA+AGG | 0.518702 | 5_2:-57176311 | Msa0777790:CDS |
| CTATGTTAAGAAGGTAATCA+AGG | 0.526997 | 5_2:-57176302 | Msa0777790:CDS |
| AAGGTAATCAAGGCAAGGAA+TGG | 0.530345 | 5_2:-57176292 | Msa0777790:CDS |
| TCCAATGAAATGAGACATGT+TGG | 0.531006 | 5_2:+57175195 | None:intergenic |
| ACAATTCCATTACAGCTGTC+GGG | 0.533970 | 5_2:-57174841 | Msa0777790:CDS |
| CCTTCTTAACATAGGCGATA+CGG | 0.534776 | 5_2:+57176311 | None:intergenic |
| AAACTTATATGGGGACCACC+AGG | 0.535882 | 5_2:-57175657 | Msa0777790:CDS |
| TCTGTTCCAGATTCAACGAC+TGG | 0.536252 | 5_2:-57173755 | Msa0777790:CDS |
| ACAGAACATTCTTAATAGCC+CGG | 0.537690 | 5_2:+57173773 | None:intergenic |
| GTCAATGTTAAATTTAGGAA+GGG | 0.543604 | 5_2:+57175032 | None:intergenic |
| GTCATGCAAATGCATGAAGA+TGG | 0.544816 | 5_2:-57176245 | Msa0777790:CDS |
| TCTAATGGTACTGGTGATGT+TGG | 0.546314 | 5_2:-57174042 | Msa0777790:CDS |
| GCTTTCATCCAAATACTGGA+TGG | 0.546705 | 5_2:-57175371 | Msa0777790:CDS |
| AGGTGGCAATTCGGTTGCAT+AGG | 0.549979 | 5_2:-57175536 | Msa0777790:CDS |
| TTGTTTCCACAATGCTGAAG+AGG | 0.550324 | 5_2:-57173809 | Msa0777790:CDS |
| AGGAAATTGAGCAGTACACT+CGG | 0.550497 | 5_2:-57174155 | Msa0777790:CDS |
| ACATATCAACTACTTTCTCT+AGG | 0.550836 | 5_2:-57173675 | Msa0777790:CDS |
| ATAGCTTTCTTCCCTGACAA+TGG | 0.550979 | 5_2:+57174519 | None:intergenic |
| TAACATAGGCGATACGGTAG+GGG | 0.562252 | 5_2:+57176317 | None:intergenic |
| AAAGTGAACTTAGTATGCTA+AGG | 0.562963 | 5_2:+57175067 | None:intergenic |
| TCTTCAGCCATATGTCATGA+TGG | 0.567416 | 5_2:+57176458 | None:intergenic |
| AAAAGAGTTCTTGTATTCTG+TGG | 0.570824 | 5_2:+57176627 | None:intergenic |
| TCAAGAAACGGCGTTTAGGA+GGG | 0.570826 | 5_2:-57173714 | Msa0777790:CDS |
| ATGTGGCTATGACTAGGGCT+AGG | 0.571180 | 5_2:-57173993 | Msa0777790:CDS |
| CTTTCATCCAAATACTGGAT+GGG | 0.573095 | 5_2:-57175370 | Msa0777790:CDS |
| ATCGACTATCTGGTTCAGAC+AGG | 0.573307 | 5_2:+57175790 | None:intergenic |
| GGTAAAGAGCAATTTGGTCA+TGG | 0.575475 | 5_2:-57174436 | Msa0777790:CDS |
| ACAAGGAAGAAAGTTAGCAT+AGG | 0.580771 | 5_2:-57174219 | Msa0777790:CDS |
| CCATCATAGAACTCTTCGCA+CGG | 0.582805 | 5_2:+57174559 | None:intergenic |
| ACCAGTACCATTAGATCTCA+CGG | 0.585010 | 5_2:+57174050 | None:intergenic |
| ATCTGATGCTCCCATTGTCA+GGG | 0.594382 | 5_2:-57174530 | Msa0777790:CDS |
| CACGGGAATAAGCTAATGGA+AGG | 0.595715 | 5_2:+57174577 | None:intergenic |
| CAGAACATTCTTAATAGCCC+GGG | 0.595796 | 5_2:+57173774 | None:intergenic |
| TTTAATTATATTCATGTGTG+AGG | 0.595989 | 5_2:+57176006 | None:intergenic |
| CATCATAGAACTCTTCGCAC+GGG | 0.599208 | 5_2:+57174560 | None:intergenic |
| ACATTGACAAGGCCTGGATG+AGG | 0.599408 | 5_2:+57175429 | None:intergenic |
| TATGGGGACCACCAGGGACA+GGG | 0.599903 | 5_2:-57175650 | Msa0777790:CDS |
| ATGAAATTAAGTCCTCATCC+AGG | 0.605229 | 5_2:-57175441 | Msa0777790:CDS |
| TGAATATTGAAGATGACTTG+TGG | 0.605497 | 5_2:-57176111 | Msa0777790:CDS |
| CATCTCCGATTAGGATGCAA+CGG | 0.610928 | 5_2:+57174812 | None:intergenic |
| GAAACTAATTGATCCAGCAA+AGG | 0.611704 | 5_2:-57174923 | Msa0777790:CDS |
| TGTGTTTCCTCAAACAATAG+AGG | 0.616517 | 5_2:+57176601 | None:intergenic |
| TGCCAGTGTTCATGAAGACA+AGG | 0.619804 | 5_2:-57174236 | Msa0777790:intron |
| GGAAATTGAGCAGTACACTC+GGG | 0.620554 | 5_2:-57174154 | Msa0777790:CDS |
| TTAAGAAGGTAATCAAGGCA+AGG | 0.623298 | 5_2:-57176297 | Msa0777790:CDS |
| AAATTTAACATTGACATGAG+AGG | 0.626648 | 5_2:-57175024 | Msa0777790:CDS |
| CTTAACATAGGCGATACGGT+AGG | 0.632234 | 5_2:+57176315 | None:intergenic |
| TACTTCGTCCAAATTCACAT+TGG | 0.633182 | 5_2:+57174665 | None:intergenic |
| TGGACAAAGTCTGAAGAACA+TGG | 0.636091 | 5_2:-57174416 | Msa0777790:CDS |
| AAATAGACAAAGAACAAATG+TGG | 0.638430 | 5_2:-57174010 | Msa0777790:CDS |
| TTGTAATGTTGGGATACGAA+AGG | 0.638800 | 5_2:-57174630 | Msa0777790:CDS |
| AACTTATATGGGGACCACCA+GGG | 0.643082 | 5_2:-57175656 | Msa0777790:CDS |
| AACTACTTTCTCTAGGCGAG+TGG | 0.643303 | 5_2:-57173668 | Msa0777790:CDS |
| GCTGATATCAAACTTATATG+GGG | 0.644417 | 5_2:-57175666 | Msa0777790:CDS |
| AGATGACTTGCAGAACAACA+AGG | 0.652641 | 5_2:-57176215 | Msa0777790:CDS |
| GCAATGAGATCTCCTGACAC+AGG | 0.658736 | 5_2:+57176391 | None:intergenic |
| GGTCTCTTGGAAATTCCTTG+GGG | 0.661476 | 5_2:-57175134 | Msa0777790:CDS |
| AGTATTCTTACAATTGGACG+CGG | 0.662302 | 5_2:+57175971 | None:intergenic |
| TCAAGTTTATGAAATTCAGG+AGG | 0.663310 | 5_2:-57174175 | Msa0777790:CDS |
| ATTGAATGAGATTCTCTACA+CGG | 0.664980 | 5_2:+57175394 | None:intergenic |
| CTCCGATTAGGATGCAACGG+TGG | 0.685534 | 5_2:+57174815 | None:intergenic |
| TATCGAGAAAGACATTGACA+AGG | 0.728740 | 5_2:+57175418 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTGTAATCAATACAT+TGG | - | chr5_2:57173715-57173734 | Msa0777790:CDS | 15.0% |
| !! | AATATAATTAAAACAGTGTT+GGG | - | chr5_2:57174816-57174835 | Msa0777790:CDS | 15.0% |
| !!! | AAAGTTATTTTTCTTGAATT+TGG | + | chr5_2:57175707-57175726 | None:intergenic | 15.0% |
| !! | ATAATTAAAAGTCTTTATGA+AGG | - | chr5_2:57176441-57176460 | Msa0777790:CDS | 15.0% |
| !!! | TCAAAATATGTTACCTTTTA+AGG | + | chr5_2:57173694-57173713 | None:intergenic | 20.0% |
| !! | CTTGAAACGTAAAAAATAAA+GGG | + | chr5_2:57173823-57173842 | None:intergenic | 20.0% |
| !! | ACTTGAAACGTAAAAAATAA+AGG | + | chr5_2:57173824-57173843 | None:intergenic | 20.0% |
| !!! | TAGAAATGCTAGTTTTAATA+CGG | + | chr5_2:57173989-57174008 | None:intergenic | 20.0% |
| !! | TTTAATTATATTCATGTGTG+AGG | + | chr5_2:57174808-57174827 | None:intergenic | 20.0% |
| !! | GAATATAATTAAAACAGTGT+TGG | - | chr5_2:57174815-57174834 | Msa0777790:CDS | 20.0% |
| !! | GTATGCTATATATTAAATGA+AGG | + | chr5_2:57174888-57174907 | None:intergenic | 20.0% |
| !!! | TTCAAACATAATTTTTCATG+CGG | + | chr5_2:57174916-57174935 | None:intergenic | 20.0% |
| !!! | AATACAAAAAAGCATTAAAC+AGG | + | chr5_2:57174974-57174993 | None:intergenic | 20.0% |
| !! | TTTGAATACAAGAAGATATT+TGG | - | chr5_2:57175541-57175560 | Msa0777790:CDS | 20.0% |
| !! | AGCTATGTTAATAAAAGAAT+AGG | + | chr5_2:57176352-57176371 | None:intergenic | 20.0% |
| !!! | TTCTTTTATTAACATAGCTA+AGG | - | chr5_2:57176353-57176372 | Msa0777790:CDS | 20.0% |
| !!! | TCTTTTATTAACATAGCTAA+GGG | - | chr5_2:57176354-57176373 | Msa0777790:CDS | 20.0% |
| !!! | ACATTCTTTAAGACCTTAAA+AGG | - | chr5_2:57173678-57173697 | Msa0777790:CDS | 25.0% |
| !! | CACTCTTTAAGCATTTTAAA+AGG | + | chr5_2:57173778-57173797 | None:intergenic | 25.0% |
| ! | AACTGAATTATGGTTGAATT+AGG | + | chr5_2:57173884-57173903 | None:intergenic | 25.0% |
| ! | TTCATGCATTAACTGAATTA+TGG | + | chr5_2:57173894-57173913 | None:intergenic | 25.0% |
| ! | AATTCAGTTAATGCATGAAA+AGG | - | chr5_2:57173895-57173914 | Msa0777790:CDS | 25.0% |
| !! | TTTTTGCTTATAAATGTGAC+CGG | + | chr5_2:57174054-57174073 | None:intergenic | 25.0% |
| ! | ACATTATTGATCTCACAAAA+AGG | + | chr5_2:57174276-57174295 | None:intergenic | 25.0% |
| ! | ATAATGTTCAAAAAACTGCA+TGG | - | chr5_2:57174289-57174308 | Msa0777790:intron | 25.0% |
| !!! | ATGAATTGGTTTTGATCTTT+TGG | + | chr5_2:57174327-57174346 | None:intergenic | 25.0% |
| ! | TCTGATGAAGTTGAAAATAT+TGG | - | chr5_2:57174387-57174406 | Msa0777790:CDS | 25.0% |
| ! | AATATTCATCTTCATGCATT+CGG | + | chr5_2:57174688-57174707 | None:intergenic | 25.0% |
| !!! | CAAAAGAGTATTCTTACAAT+TGG | + | chr5_2:57174849-57174868 | None:intergenic | 25.0% |
| !! | AATACTCTTTTGATCTGAAT+AGG | - | chr5_2:57174857-57174876 | Msa0777790:CDS | 25.0% |
| !! | TCAAACATAATTTTTCATGC+GGG | + | chr5_2:57174915-57174934 | None:intergenic | 25.0% |
| !! | TATCATGTCTTCTTTTATGA+AGG | + | chr5_2:57175050-57175069 | None:intergenic | 25.0% |
| ! | ATGCTGATATCAAACTTATA+TGG | - | chr5_2:57175143-57175162 | Msa0777790:CDS | 25.0% |
| ! | TGCTGATATCAAACTTATAT+GGG | - | chr5_2:57175144-57175163 | Msa0777790:CDS | 25.0% |
| ! | TTTGTTAGCAAATTTCTTCA+TGG | + | chr5_2:57175503-57175522 | None:intergenic | 25.0% |
| ! | GTCAATGTTAAATTTAGGAA+GGG | + | chr5_2:57175782-57175801 | None:intergenic | 25.0% |
| ! | TGTCAATGTTAAATTTAGGA+AGG | + | chr5_2:57175783-57175802 | None:intergenic | 25.0% |
| ! | CTCATGTCAATGTTAAATTT+AGG | + | chr5_2:57175787-57175806 | None:intergenic | 25.0% |
| ! | AAATTTAACATTGACATGAG+AGG | - | chr5_2:57175787-57175806 | Msa0777790:CDS | 25.0% |
| ! | TTTGAAAGACTTGTAATGTT+GGG | - | chr5_2:57176171-57176190 | Msa0777790:CDS | 25.0% |
| !! | TATAATAAGCTTTTCCTTGA+AGG | - | chr5_2:57176312-57176331 | Msa0777790:CDS | 25.0% |
| ! | AACCATTATGTTGTATTTCA+TGG | - | chr5_2:57176484-57176503 | Msa0777790:CDS | 25.0% |
| ! | TTCCATGAAATACAACATAA+TGG | + | chr5_2:57176489-57176508 | None:intergenic | 25.0% |
| ! | TCATAAACTTGAGCATTATA+TGG | + | chr5_2:57176628-57176647 | None:intergenic | 25.0% |
| ! | AAATAGACAAAGAACAAATG+TGG | - | chr5_2:57176801-57176820 | Msa0777790:intron | 25.0% |
| ! | TAGTTATTGATGCTAAGAAT+AGG | - | chr5_2:57176977-57176996 | Msa0777790:intron | 25.0% |
| ! | AGTTATTGATGCTAAGAATA+GGG | - | chr5_2:57176978-57176997 | Msa0777790:intron | 25.0% |
| TAAGGTCTTAAAGAATGTCT+CGG | + | chr5_2:57173676-57173695 | None:intergenic | 30.0% | |
| !! | AAAATGCTTAAAGAGTGTTC+TGG | - | chr5_2:57173781-57173800 | Msa0777790:CDS | 30.0% |
| !! | AAATGCTTAAAGAGTGTTCT+GGG | - | chr5_2:57173782-57173801 | Msa0777790:CDS | 30.0% |
| CTTATAACAACTTGCAAAGT+TGG | + | chr5_2:57174131-57174150 | None:intergenic | 30.0% | |
| ACTTTGCAAGTTGTTATAAG+AGG | - | chr5_2:57174131-57174150 | Msa0777790:CDS | 30.0% | |
| AAAAGAGTTCTTGTATTCTG+TGG | + | chr5_2:57174187-57174206 | None:intergenic | 30.0% | |
| ! | TTTTGTACCTCTATTGTTTG+AGG | - | chr5_2:57174203-57174222 | Msa0777790:CDS | 30.0% |
| TTCAAGTCATTTAAGCTTTC+AGG | + | chr5_2:57174462-57174481 | None:intergenic | 30.0% | |
| CTTGATTACCTTCTTAACAT+AGG | + | chr5_2:57174511-57174530 | None:intergenic | 30.0% | |
| CTATGTTAAGAAGGTAATCA+AGG | - | chr5_2:57174509-57174528 | Msa0777790:CDS | 30.0% | |
| AATATCCATCTTCATGCAAT+TGG | + | chr5_2:57174631-57174650 | None:intergenic | 30.0% | |
| TGAATATTGAAGATGACTTG+TGG | - | chr5_2:57174700-57174719 | Msa0777790:intron | 30.0% | |
| !! | CATTTGTTGTCATGTTCATA+AGG | + | chr5_2:57174758-57174777 | None:intergenic | 30.0% |
| !!! | TGCTTTTTTGTATTTCAGAG+TGG | - | chr5_2:57174980-57174999 | Msa0777790:CDS | 30.0% |
| GCTGATATCAAACTTATATG+GGG | - | chr5_2:57175145-57175164 | Msa0777790:CDS | 30.0% | |
| TGCAAAATTGCAGTATTAGT+TGG | + | chr5_2:57175256-57175275 | None:intergenic | 30.0% | |
| ! | AACTAATACTGCAATTTTGC+AGG | - | chr5_2:57175255-57175274 | Msa0777790:CDS | 30.0% |
| TCACTTGATCATGATACATA+TGG | - | chr5_2:57175310-57175329 | Msa0777790:CDS | 30.0% | |
| GATCATGATACATATGGTTT+AGG | - | chr5_2:57175316-57175335 | Msa0777790:CDS | 30.0% | |
| ATTGAATGAGATTCTCTACA+CGG | + | chr5_2:57175420-57175439 | None:intergenic | 30.0% | |
| ATGTCTCATTTCATTGGAAA+TGG | - | chr5_2:57175621-57175640 | Msa0777790:CDS | 30.0% | |
| AAAGTGAACTTAGTATGCTA+AGG | + | chr5_2:57175747-57175766 | None:intergenic | 30.0% | |
| TCGATTACTAAAAATTGCAC+TGG | + | chr5_2:57175919-57175938 | None:intergenic | 30.0% | |
| ! | TTAGTAAAAAGCAAGGTACT+CGG | - | chr5_2:57176039-57176058 | Msa0777790:CDS | 30.0% |
| GTTTGAAAGACTTGTAATGT+TGG | - | chr5_2:57176170-57176189 | Msa0777790:CDS | 30.0% | |
| TGCTCAAGTTTATGAAATTC+AGG | - | chr5_2:57176633-57176652 | Msa0777790:CDS | 30.0% | |
| TCAAGTTTATGAAATTCAGG+AGG | - | chr5_2:57176636-57176655 | Msa0777790:CDS | 30.0% | |
| AGATACTGTCTTTGGATATT+AGG | - | chr5_2:57176910-57176929 | Msa0777790:intron | 30.0% | |
| ACATATCAACTACTTTCTCT+AGG | - | chr5_2:57177136-57177155 | Msa0777790:CDS | 30.0% | |
| AAGGTCTTAAAGAATGTCTC+GGG | + | chr5_2:57173675-57173694 | None:intergenic | 35.0% | |
| TTATGGTTGAATTAGGCTGA+TGG | + | chr5_2:57173877-57173896 | None:intergenic | 35.0% | |
| GAAATGACAAGATGTCAAGA+TGG | + | chr5_2:57173945-57173964 | None:intergenic | 35.0% | |
| CTGTTAAATTATACTCCCTC+CGG | - | chr5_2:57174032-57174051 | Msa0777790:CDS | 35.0% | |
| GTTGGTCATGTTTACTTGAA+AGG | + | chr5_2:57174113-57174132 | None:intergenic | 35.0% | |
| TGTGTTTCCTCAAACAATAG+AGG | + | chr5_2:57174213-57174232 | None:intergenic | 35.0% | |
| ! | CATGATGGAACTGTATGAAT+TGG | + | chr5_2:57174341-57174360 | None:intergenic | 35.0% |
| TACAGTTCCATCATGACATA+TGG | - | chr5_2:57174346-57174365 | Msa0777790:intron | 35.0% | |
| GGAAATTATAAACCTGTGTC+AGG | - | chr5_2:57174408-57174427 | Msa0777790:CDS | 35.0% | |
| TCATTGCTTTCACACACATT+AGG | - | chr5_2:57174436-57174455 | Msa0777790:CDS | 35.0% | |
| TTAAGAAGGTAATCAAGGCA+AGG | - | chr5_2:57174514-57174533 | Msa0777790:CDS | 35.0% | |
| !! | GACAGTACTGAGATTTTATC+AGG | + | chr5_2:57174549-57174568 | None:intergenic | 35.0% |
| ATCATCCAATTGCATGAAGA+TGG | - | chr5_2:57174623-57174642 | Msa0777790:CDS | 35.0% | |
| AGTATTCTTACAATTGGACG+CGG | + | chr5_2:57174843-57174862 | None:intergenic | 35.0% | |
| ! | TAATACTGCAATTTTGCAGG+TGG | - | chr5_2:57175258-57175277 | Msa0777790:CDS | 35.0% |
| ! | TTAGGTGACATTGTGCTATT+TGG | - | chr5_2:57175334-57175353 | Msa0777790:CDS | 35.0% |
| !! | GACATTGTGCTATTTGGAAA+TGG | - | chr5_2:57175340-57175359 | Msa0777790:CDS | 35.0% |
| ! | TGCTATTTGGAAATGGTAAG+AGG | - | chr5_2:57175347-57175366 | Msa0777790:CDS | 35.0% |
| ATGAAATTAAGTCCTCATCC+AGG | - | chr5_2:57175370-57175389 | Msa0777790:CDS | 35.0% | |
| TATCGAGAAAGACATTGACA+AGG | + | chr5_2:57175396-57175415 | None:intergenic | 35.0% | |
| CAATGCTTTCATCCAAATAC+TGG | - | chr5_2:57175436-57175455 | Msa0777790:CDS | 35.0% | |
| CTTTCATCCAAATACTGGAT+GGG | - | chr5_2:57175441-57175460 | Msa0777790:CDS | 35.0% | |
| TCCAATGAAATGAGACATGT+TGG | + | chr5_2:57175619-57175638 | None:intergenic | 35.0% | |
| !! | TTCAAGCTCTTGATTTGCTA+AGG | - | chr5_2:57175656-57175675 | Msa0777790:CDS | 35.0% |
| GAAACTAATTGATCCAGCAA+AGG | - | chr5_2:57175888-57175907 | Msa0777790:intron | 35.0% | |
| AACAATTCCATTACAGCTGT+CGG | - | chr5_2:57175969-57175988 | Msa0777790:intron | 35.0% | |
| TCCTGCATTAGTAAAAAGCA+AGG | - | chr5_2:57176032-57176051 | Msa0777790:CDS | 35.0% | |
| !!! | ACCTTGCTTTTTACTAATGC+AGG | + | chr5_2:57176036-57176055 | None:intergenic | 35.0% |
| ATAGCAGACCAATGTGAATT+TGG | - | chr5_2:57176138-57176157 | Msa0777790:CDS | 35.0% | |
| TACTTCGTCCAAATTCACAT+TGG | + | chr5_2:57176149-57176168 | None:intergenic | 35.0% | |
| TTGTAATGTTGGGATACGAA+AGG | - | chr5_2:57176181-57176200 | Msa0777790:CDS | 35.0% | |
| ! | AAGAGTACATTTCTCCTTCA+AGG | + | chr5_2:57176329-57176348 | None:intergenic | 35.0% |
| ACAAGGAAGAAAGTTAGCAT+AGG | - | chr5_2:57176592-57176611 | Msa0777790:CDS | 35.0% | |
| GTAAATGTTCGTTCTGTTGA+TGG | - | chr5_2:57176700-57176719 | Msa0777790:intron | 35.0% | |
| ATATCTACCGTGAGATCTAA+TGG | - | chr5_2:57176754-57176773 | Msa0777790:intron | 35.0% | |
| AACAAATGTGGCTATGACTA+GGG | - | chr5_2:57176813-57176832 | Msa0777790:intron | 35.0% | |
| ! | TTTTGTGCAGATACTGTCTT+TGG | - | chr5_2:57176902-57176921 | Msa0777790:intron | 35.0% |
| TAATCAACAGTGACTCTGTT+TGG | - | chr5_2:57176947-57176966 | Msa0777790:intron | 35.0% | |
| TGCTGAAGAGGACAAAAAAT+TGG | - | chr5_2:57177014-57177033 | Msa0777790:intron | 35.0% | |
| ACAGAACATTCTTAATAGCC+CGG | + | chr5_2:57177041-57177060 | None:intergenic | 35.0% | |
| TTGAGTCACCATTCAAGAAA+CGG | - | chr5_2:57177085-57177104 | Msa0777790:intron | 35.0% | |
| CTGATGGCTCATAAGTCATA+AGG | + | chr5_2:57173861-57173880 | None:intergenic | 40.0% | |
| !! | AGTTTTAATACGGCGCATGA+GGG | + | chr5_2:57173979-57173998 | None:intergenic | 40.0% |
| !!! | TAGTTTTAATACGGCGCATG+AGG | + | chr5_2:57173980-57173999 | None:intergenic | 40.0% |
| TGCTTATAAATGTGACCGGA+GGG | + | chr5_2:57174050-57174069 | None:intergenic | 40.0% | |
| TTGCTTATAAATGTGACCGG+AGG | + | chr5_2:57174051-57174070 | None:intergenic | 40.0% | |
| TCTTCAGCCATATGTCATGA+TGG | + | chr5_2:57174356-57174375 | None:intergenic | 40.0% | |
| TTAACATAGGCGATACGGTA+GGG | + | chr5_2:57174498-57174517 | None:intergenic | 40.0% | |
| CCTTCTTAACATAGGCGATA+CGG | + | chr5_2:57174503-57174522 | None:intergenic | 40.0% | |
| AAGGTAATCAAGGCAAGGAA+TGG | - | chr5_2:57174519-57174538 | Msa0777790:CDS | 40.0% | |
| GTCATGCAAATGCATGAAGA+TGG | - | chr5_2:57174566-57174585 | Msa0777790:CDS | 40.0% | |
| ! | AGATGACTTGCAGAACAACA+AGG | - | chr5_2:57174596-57174615 | Msa0777790:CDS | 40.0% |
| ! | CATGTGTGAGGTTGATTTCA+GGG | + | chr5_2:57174796-57174815 | None:intergenic | 40.0% |
| ! | TCATGTGTGAGGTTGATTTC+AGG | + | chr5_2:57174797-57174816 | None:intergenic | 40.0% |
| ATGAAGGTAGATCGACTATC+TGG | + | chr5_2:57175034-57175053 | None:intergenic | 40.0% | |
| GCTTGAAACAGCATCTTCTT+GGG | + | chr5_2:57175098-57175117 | None:intergenic | 40.0% | |
| AGCTTGAAACAGCATCTTCT+TGG | + | chr5_2:57175099-57175118 | None:intergenic | 40.0% | |
| ! | CAATTTTGCAGGTGGCAATT+CGG | - | chr5_2:57175266-57175285 | Msa0777790:CDS | 40.0% |
| ! | TCGGTTGCATAGGTTAGTTA+TGG | - | chr5_2:57175285-57175304 | Msa0777790:CDS | 40.0% |
| GCTTTCATCCAAATACTGGA+TGG | - | chr5_2:57175440-57175459 | Msa0777790:CDS | 40.0% | |
| TTAGTCTCCCATCCAGTATT+TGG | + | chr5_2:57175451-57175470 | None:intergenic | 40.0% | |
| GCCAACATGTCTCATTTCAT+TGG | - | chr5_2:57175615-57175634 | Msa0777790:CDS | 40.0% | |
| !! | CTTGATTTGCTAAGGTCTCT+TGG | - | chr5_2:57175664-57175683 | Msa0777790:CDS | 40.0% |
| AAGGTCTCTTGGAAATTCCT+TGG | - | chr5_2:57175675-57175694 | Msa0777790:CDS | 40.0% | |
| AGGTCTCTTGGAAATTCCTT+GGG | - | chr5_2:57175676-57175695 | Msa0777790:CDS | 40.0% | |
| ACAATTCCATTACAGCTGTC+GGG | - | chr5_2:57175970-57175989 | Msa0777790:intron | 40.0% | |
| TAGCTTTCTTCCCTGACAAT+GGG | + | chr5_2:57176294-57176313 | None:intergenic | 40.0% | |
| ATAGCTTTCTTCCCTGACAA+TGG | + | chr5_2:57176295-57176314 | None:intergenic | 40.0% | |
| GCTAAGGGTAAAGAGCAATT+TGG | - | chr5_2:57176369-57176388 | Msa0777790:CDS | 40.0% | |
| GGTAAAGAGCAATTTGGTCA+TGG | - | chr5_2:57176375-57176394 | Msa0777790:CDS | 40.0% | |
| TGGACAAAGTCTGAAGAACA+TGG | - | chr5_2:57176395-57176414 | Msa0777790:CDS | 40.0% | |
| AAGTCTGAAGAACATGGTTC+AGG | - | chr5_2:57176401-57176420 | Msa0777790:CDS | 40.0% | |
| ATACGAACGCTGAAGATTTC+TGG | + | chr5_2:57176512-57176531 | None:intergenic | 40.0% | |
| TTCCTTGTCTTCATGAACAC+TGG | + | chr5_2:57176580-57176599 | None:intergenic | 40.0% | |
| AGGAAATTGAGCAGTACACT+CGG | - | chr5_2:57176656-57176675 | Msa0777790:CDS | 40.0% | |
| !!! | CGTTCTGTTGATGGTTTTCA+AGG | - | chr5_2:57176709-57176728 | Msa0777790:intron | 40.0% |
| !!! | TCTGTTGATGGTTTTCAAGG+TGG | - | chr5_2:57176712-57176731 | Msa0777790:intron | 40.0% |
| ACCAGTACCATTAGATCTCA+CGG | + | chr5_2:57176764-57176783 | None:intergenic | 40.0% | |
| !! | TCTAATGGTACTGGTGATGT+TGG | - | chr5_2:57176769-57176788 | Msa0777790:intron | 40.0% |
| GAACAAATGTGGCTATGACT+AGG | - | chr5_2:57176812-57176831 | Msa0777790:intron | 40.0% | |
| TTGTTTCCACAATGCTGAAG+AGG | - | chr5_2:57177002-57177021 | Msa0777790:intron | 40.0% | |
| ! | TTTTGTCCTCTTCAGCATTG+TGG | + | chr5_2:57177011-57177030 | None:intergenic | 40.0% |
| AAGAGGACAAAAAATTGGCC+CGG | - | chr5_2:57177019-57177038 | Msa0777790:intron | 40.0% | |
| CAGAACATTCTTAATAGCCC+GGG | + | chr5_2:57177040-57177059 | None:intergenic | 40.0% | |
| ATTCTTCCAGTCGTTGAATC+TGG | + | chr5_2:57177065-57177084 | None:intergenic | 40.0% | |
| TAACATAGGCGATACGGTAG+GGG | + | chr5_2:57174497-57174516 | None:intergenic | 45.0% | |
| CTTAACATAGGCGATACGGT+AGG | + | chr5_2:57174499-57174518 | None:intergenic | 45.0% | |
| CCGTATCGCCTATGTTAAGA+AGG | - | chr5_2:57174500-57174519 | Msa0777790:CDS | 45.0% | |
| ! | ATCGACTATCTGGTTCAGAC+AGG | + | chr5_2:57175024-57175043 | None:intergenic | 45.0% |
| AAACTTATATGGGGACCACC+AGG | - | chr5_2:57175154-57175173 | Msa0777790:CDS | 45.0% | |
| AACTTATATGGGGACCACCA+GGG | - | chr5_2:57175155-57175174 | Msa0777790:CDS | 45.0% | |
| CTCTACTCGAGCTAAAAACC+AGG | - | chr5_2:57175215-57175234 | Msa0777790:CDS | 45.0% | |
| AGAAAGACATTGACAAGGCC+TGG | + | chr5_2:57175391-57175410 | None:intergenic | 45.0% | |
| GGAGTTCAGCAACTCTATCA+TGG | + | chr5_2:57175482-57175501 | None:intergenic | 45.0% | |
| TGTTGGCATGTGTGTGTGTA+AGG | + | chr5_2:57175602-57175621 | None:intergenic | 45.0% | |
| GGTCTCTTGGAAATTCCTTG+GGG | - | chr5_2:57175677-57175696 | Msa0777790:CDS | 45.0% | |
| CATCTCCGATTAGGATGCAA+CGG | + | chr5_2:57176002-57176021 | None:intergenic | 45.0% | |
| GTTGTCTCTCATCTCCGATT+AGG | + | chr5_2:57176011-57176030 | None:intergenic | 45.0% | |
| CACGGGAATAAGCTAATGGA+AGG | + | chr5_2:57176237-57176256 | None:intergenic | 45.0% | |
| TTCGCACGGGAATAAGCTAA+TGG | + | chr5_2:57176241-57176260 | None:intergenic | 45.0% | |
| CATCATAGAACTCTTCGCAC+GGG | + | chr5_2:57176254-57176273 | None:intergenic | 45.0% | |
| CCATCATAGAACTCTTCGCA+CGG | + | chr5_2:57176255-57176274 | None:intergenic | 45.0% | |
| TATCTGATGCTCCCATTGTC+AGG | - | chr5_2:57176280-57176299 | Msa0777790:CDS | 45.0% | |
| ATCTGATGCTCCCATTGTCA+GGG | - | chr5_2:57176281-57176300 | Msa0777790:CDS | 45.0% | |
| TGCCAGTGTTCATGAAGACA+AGG | - | chr5_2:57176575-57176594 | Msa0777790:CDS | 45.0% | |
| GGAAATTGAGCAGTACACTC+GGG | - | chr5_2:57176657-57176676 | Msa0777790:CDS | 45.0% | |
| !! | TGATGGTTTTCAAGGTGGTG+AGG | - | chr5_2:57176717-57176736 | Msa0777790:intron | 45.0% |
| ACCGTGAGATCTAATGGTAC+TGG | - | chr5_2:57176760-57176779 | Msa0777790:intron | 45.0% | |
| AGAGGACAAAAAATTGGCCC+GGG | - | chr5_2:57177020-57177039 | Msa0777790:intron | 45.0% | |
| TCTGTTCCAGATTCAACGAC+TGG | - | chr5_2:57177056-57177075 | Msa0777790:intron | 45.0% | |
| CCTAAACGCCGTTTCTTGAA+TGG | + | chr5_2:57177096-57177115 | None:intergenic | 45.0% | |
| CCATTCAAGAAACGGCGTTT+AGG | - | chr5_2:57177093-57177112 | Msa0777790:intron | 45.0% | |
| TTCAAGAAACGGCGTTTAGG+AGG | - | chr5_2:57177096-57177115 | Msa0777790:intron | 45.0% | |
| TCAAGAAACGGCGTTTAGGA+GGG | - | chr5_2:57177097-57177116 | Msa0777790:intron | 45.0% | |
| AACTACTTTCTCTAGGCGAG+TGG | - | chr5_2:57177143-57177162 | Msa0777790:CDS | 45.0% | |
| !!! | TGAAATATTTAATTTTTTTA+TGG | - | chr5_2:57173742-57173761 | Msa0777790:CDS | 5.0% |
| ! | GTGGCTGACTTAAACGTCTC+TGG | + | chr5_2:57174168-57174187 | None:intergenic | 50.0% |
| GCAATGAGATCTCCTGACAC+AGG | + | chr5_2:57174423-57174442 | None:intergenic | 50.0% | |
| !! | TTTGTTTTCCCTGTCCCTGG+TGG | + | chr5_2:57175172-57175191 | None:intergenic | 50.0% |
| !!! | GTCTTTGTTTTCCCTGTCCC+TGG | + | chr5_2:57175175-57175194 | None:intergenic | 50.0% |
| TGGAGCACATGTCAATGTCC+TGG | + | chr5_2:57175236-57175255 | None:intergenic | 50.0% | |
| AGGTGGCAATTCGGTTGCAT+AGG | - | chr5_2:57175275-57175294 | Msa0777790:CDS | 50.0% | |
| ACATTGACAAGGCCTGGATG+AGG | + | chr5_2:57175385-57175404 | None:intergenic | 50.0% | |
| !! | CTTGAATTTGGCTTGCCCCA+AGG | + | chr5_2:57175695-57175714 | None:intergenic | 50.0% |
| CTCCACCGTTGCATCCTAAT+CGG | - | chr5_2:57175994-57176013 | Msa0777790:CDS | 50.0% | |
| CCGTGCGAAGAGTTCTATGA+TGG | - | chr5_2:57176252-57176271 | Msa0777790:CDS | 50.0% | |
| ATGTGGCTATGACTAGGGCT+AGG | - | chr5_2:57176818-57176837 | Msa0777790:intron | 50.0% | |
| ACGGCGTTTAGGAGGGAAAA+TGG | - | chr5_2:57177104-57177123 | Msa0777790:intron | 50.0% | |
| CGGCGTTTAGGAGGGAAAAT+GGG | - | chr5_2:57177105-57177124 | Msa0777790:intron | 50.0% | |
| GCGCATGAGGGTAGTTGCAT+AGG | + | chr5_2:57173967-57173986 | None:intergenic | 55.0% | |
| ! | AGGCGATACGGTAGGGGTTT+TGG | + | chr5_2:57174491-57174510 | None:intergenic | 55.0% |
| !! | TGCACTGGCTTCACCTTTGC+TGG | + | chr5_2:57175904-57175923 | None:intergenic | 55.0% |
| TGGAGACCCGACAGCTGTAA+TGG | + | chr5_2:57175979-57175998 | None:intergenic | 55.0% | |
| CTCCGATTAGGATGCAACGG+TGG | + | chr5_2:57175999-57176018 | None:intergenic | 55.0% | |
| ATATGGGGACCACCAGGGAC+AGG | - | chr5_2:57175160-57175179 | Msa0777790:CDS | 60.0% | |
| TATGGGGACCACCAGGGACA+GGG | - | chr5_2:57175161-57175180 | Msa0777790:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 57173657 | 57177176 | 57173657 | ID=Msa0777790;Name=Msa0777790 |
| chr5_2 | mRNA | 57173657 | 57177176 | 57173657 | ID=Msa0777790-mRNA-1;Parent=Msa0777790;Name=Msa0777790-mRNA-1;_AED=0.28;_eAED=0.29;_QI=0|0.5|0.2|0.8|1|1|5|0|906 |
| chr5_2 | exon | 57177134 | 57177176 | 57177134 | ID=Msa0777790-mRNA-1:exon:16904;Parent=Msa0777790-mRNA-1 |
| chr5_2 | exon | 57175982 | 57176682 | 57175982 | ID=Msa0777790-mRNA-1:exon:16903;Parent=Msa0777790-mRNA-1 |
| chr5_2 | exon | 57174780 | 57175835 | 57174780 | ID=Msa0777790-mRNA-1:exon:16902;Parent=Msa0777790-mRNA-1 |
| chr5_2 | exon | 57174371 | 57174695 | 57174371 | ID=Msa0777790-mRNA-1:exon:16901;Parent=Msa0777790-mRNA-1 |
| chr5_2 | exon | 57173657 | 57174252 | 57173657 | ID=Msa0777790-mRNA-1:exon:16900;Parent=Msa0777790-mRNA-1 |
| chr5_2 | CDS | 57177134 | 57177176 | 57177134 | ID=Msa0777790-mRNA-1:cds;Parent=Msa0777790-mRNA-1 |
| chr5_2 | CDS | 57175982 | 57176682 | 57175982 | ID=Msa0777790-mRNA-1:cds;Parent=Msa0777790-mRNA-1 |
| chr5_2 | CDS | 57174780 | 57175835 | 57174780 | ID=Msa0777790-mRNA-1:cds;Parent=Msa0777790-mRNA-1 |
| chr5_2 | CDS | 57174371 | 57174695 | 57174371 | ID=Msa0777790-mRNA-1:cds;Parent=Msa0777790-mRNA-1 |
| chr5_2 | CDS | 57173657 | 57174252 | 57173657 | ID=Msa0777790-mRNA-1:cds;Parent=Msa0777790-mRNA-1 |
| Gene Sequence |
| Protein sequence |
