AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1264360

Find 185 sgRNAs with CRISPR-Local

Find 419 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE

Chromosome Type Strat End Strand Name
chr8_2 gene 67896788 67902590 67896788 ID=Msa1264360;Name=Msa1264360
chr8_2 mRNA 67896788 67902590 67896788 ID=Msa1264360-mRNA-1;Parent=Msa1264360;Name=Msa1264360-mRNA-1;_AED=0.02;_eAED=0.02;_QI=210|1|1|1|0.9|0.81|11|843|567
chr8_2 exon 67896788 67897186 67896788 ID=Msa1264360-mRNA-1:exon:22378;Parent=Msa1264360-mRNA-1
chr8_2 exon 67897348 67897762 67897348 ID=Msa1264360-mRNA-1:exon:22379;Parent=Msa1264360-mRNA-1
chr8_2 exon 67898062 67898256 67898062 ID=Msa1264360-mRNA-1:exon:22380;Parent=Msa1264360-mRNA-1
chr8_2 exon 67898367 67898592 67898367 ID=Msa1264360-mRNA-1:exon:22381;Parent=Msa1264360-mRNA-1
chr8_2 exon 67899167 67899293 67899167 ID=Msa1264360-mRNA-1:exon:22382;Parent=Msa1264360-mRNA-1
chr8_2 exon 67899578 67899673 67899578 ID=Msa1264360-mRNA-1:exon:22383;Parent=Msa1264360-mRNA-1
chr8_2 exon 67900185 67900262 67900185 ID=Msa1264360-mRNA-1:exon:22384;Parent=Msa1264360-mRNA-1
chr8_2 exon 67900789 67900849 67900789 ID=Msa1264360-mRNA-1:exon:22385;Parent=Msa1264360-mRNA-1
chr8_2 exon 67901094 67901281 67901094 ID=Msa1264360-mRNA-1:exon:22386;Parent=Msa1264360-mRNA-1
chr8_2 exon 67901599 67902487 67901599 ID=Msa1264360-mRNA-1:exon:22387;Parent=Msa1264360-mRNA-1
chr8_2 exon 67902508 67902590 67902508 ID=Msa1264360-mRNA-1:exon:22388;Parent=Msa1264360-mRNA-1
chr8_2 five_prime_UTR 67896788 67896997 67896788 ID=Msa1264360-mRNA-1:five_prime_utr;Parent=Msa1264360-mRNA-1
chr8_2 CDS 67896998 67897186 67896998 ID=Msa1264360-mRNA-1:cds;Parent=Msa1264360-mRNA-1
chr8_2 CDS 67897348 67897762 67897348 ID=Msa1264360-mRNA-1:cds;Parent=Msa1264360-mRNA-1
chr8_2 CDS 67898062 67898256 67898062 ID=Msa1264360-mRNA-1:cds;Parent=Msa1264360-mRNA-1
chr8_2 CDS 67898367 67898592 67898367 ID=Msa1264360-mRNA-1:cds;Parent=Msa1264360-mRNA-1
chr8_2 CDS 67899167 67899293 67899167 ID=Msa1264360-mRNA-1:cds;Parent=Msa1264360-mRNA-1
chr8_2 CDS 67899578 67899673 67899578 ID=Msa1264360-mRNA-1:cds;Parent=Msa1264360-mRNA-1
chr8_2 CDS 67900185 67900262 67900185 ID=Msa1264360-mRNA-1:cds;Parent=Msa1264360-mRNA-1
chr8_2 CDS 67900789 67900849 67900789 ID=Msa1264360-mRNA-1:cds;Parent=Msa1264360-mRNA-1
chr8_2 CDS 67901094 67901281 67901094 ID=Msa1264360-mRNA-1:cds;Parent=Msa1264360-mRNA-1
chr8_2 CDS 67901599 67901727 67901599 ID=Msa1264360-mRNA-1:cds;Parent=Msa1264360-mRNA-1
chr8_2 three_prime_UTR 67901728 67902487 67901728 ID=Msa1264360-mRNA-1:three_prime_utr;Parent=Msa1264360-mRNA-1
chr8_2 three_prime_UTR 67902508 67902590 67902508 ID=Msa1264360-mRNA-1:three_prime_utr;Parent=Msa1264360-mRNA-1
Gene Sequence

>Msa1264360

ATGGCGGCCATAGCTTCTGCCATTGTTATTGCTTTCTCAAAATCTTCCTCTTCTTCTCTCTTTCTCACTTCGCGTATTCGCTTTGCTTCATTTCCTAAGCGAAGCTTTCATTCAACGACGAAGCTCATGTCTCAGTCACGTGACACTACTCTCGGCCTCACTCACCCCACCAACATCGAATCCCCTAAGATCTCTTTTTCTGCTACGGATGTTGATGTGACTGAATGGAAAGGAGACATACTAGCAGTGGGTGTTACTGAGAAAGATTTAACAAGAGATGCTAAATCGAGATTCGAGAATTCGATTTTGAACAAGATTGATTTGAAGTTGGATGGTTTGTTATCTGAAGCTTCTTCTGAAGAGGATTTCTCTGGTAAAGTTGGTCAATCAACCGTTGTTAGGATTAAAGGACTTGGATCAAAGAGGATTGGTTTGATCGGTCTTGGTCAGTCACCTTCAACTACTGCACTGTATAAGGGTCTTGGTGAGGCTGTTGTCGCAGCTGCTAAGTCTGCTCAGGCAAGCAATGTTGCTATTGTTCTTGCCTCTTCTGAAGGACTTTCTTCACAATCAAAGCTTAGCACTGCTTATGCAATTGCATCTGGGGCTGTGCTGGGATTATTTGAAGATCAAAGATACAAGTCAGAATCAAAGAAACCAGCAGTTAGATCCATTGACATTATTGGTCTTGGAACGGGACCTGAATTGGAGAAAAAACTCAAGTATGCTGGAGATGTTTCTTCTGGAATAATTTTTGGAAGGGAGCTTGTAAACTCTCCTGCTAATGTTCTCACACCAGGGGTGTTGGCAGAAGAGGCATCTAAGGTTGCTTCCACCTACAGTGATGTTTTCACCGCTAAAATATTAGATGCTGATCAGTGCAAGGAATTGAAAATGGGGTCCTATCTAGGTGTTGCTGCAGCCTCGGCAAATCCTCCTCGTTTTATCCATCTTACTTACAAACCTCCAAGTGGATCTGTCAAGGTCAAGCTGGCTTTGGTTGGAAAAGGTTTGACTTTTGATAGTGGTGGCTACAACATCAAGACTGGACCTGGCTGTTCAATTGAACTCATGAAATTTGATATGGGTGGTTCAGCCGCAGTTTTAGGCGCTGCAAAAGCACTTGGTCAAATCAAACCTCTTGGGGTGGAGGTTCATTTTATAGTTGCAGCTTGTGAGAATATGATCAGTGGAACAGGTATGAGGCCTGGAGATGTTGTCACAGCTTCAAATGGAAAAACTATTGAGGTGAACAACACTGATGCTGAGGGAAGACTCACTCTGGCAGATGCTCTGGTATATGCTTGTAACCAAGGTGTTGAAAAGATTATTGATTTGGCAACCTTAACTGGGGCATGTGTAGTTGCTCTTGGGCCCTCAATTGCAGGTGTGTTTTCACCCAATGATGAACTGGTAAAAGAAGTTTTGGAAGCTTCTGAGGTGAGTGGGGAGAAACTATGGAGGCTGCCAATAGAGGAAAGCTACTGGGAATCAATGAAATCAGGAGTGGCTGATATGGTAAACACTGGTGGTAGACCAGGTGGTTCTATCACTGCTGCTCTTTTCCTGAAACAGTTTGTTGATGAAAAGGTTCAATGGTTGCATATTGACATGGCTGGTCCTGTGTGGAATGACAAGAAGCGCTCAGCGACAGGATTTGGCGTTGCTACTCTAGTGGAATGGGTTTTGAAAAATTCTTCTTAA
Protein sequence

>Msa1264360

MAAIASAIVIAFSKSSSSSLFLTSRIRFASFPKRSFHSTTKLMSQSRDTTLGLTHPTNIESPKISFSATDVDVTEWKGDILAVGVTEKDLTRDAKSRFENSILNKIDLKLDGLLSEASSEEDFSGKVGQSTVVRIKGLGSKRIGLIGLGQSPSTTALYKGLGEAVVAAAKSAQASNVAIVLASSEGLSSQSKLSTAYAIASGAVLGLFEDQRYKSESKKPAVRSIDIIGLGTGPELEKKLKYAGDVSSGIIFGRELVNSPANVLTPGVLAEEASKVASTYSDVFTAKILDADQCKELKMGSYLGVAAASANPPRFIHLTYKPPSGSVKVKLALVGKGLTFDSGGYNIKTGPGCSIELMKFDMGGSAAVLGAAKALGQIKPLGVEVHFIVAACENMISGTGMRPGDVVTASNGKTIEVNNTDAEGRLTLADALVYACNQGVEKIIDLATLTGACVVALGPSIAGVFSPNDELVKEVLEASEVSGEKLWRLPIEESYWESMKSGVADMVNTGGRPGGSITAALFLKQFVDEKVQWLHIDMAGPVWNDKKRSATGFGVATLVEWVLKNSS*