Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1024180 | XP_003623230.1 | 99.620 | 527 | 2 | 0 | 1 | 527 | 1 | 527 | 0.0 | 1058 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1024180 | sp|Q940P8|TCPB_ARATH | 88.994 | 527 | 58 | 0 | 1 | 527 | 1 | 527 | 0.0 | 941 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1024180 | G7KRA6 | 99.620 | 527 | 2 | 0 | 1 | 527 | 1 | 527 | 0.0 | 1058 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011740 | Msa1024180 | 0.810103 | 1.361391e-50 | -8.615850e-47 |
| Msa0606580 | Msa1024180 | 0.862713 | 4.170528e-64 | -8.615850e-47 |
| Msa0647280 | Msa1024180 | 0.856384 | 3.336448e-62 | -8.615850e-47 |
| Msa0686800 | Msa1024180 | 0.860102 | 2.609764e-63 | -8.615850e-47 |
| Msa0838240 | Msa1024180 | 0.808355 | 3.225515e-50 | -8.615850e-47 |
| Msa0238090 | Msa1024180 | 0.821420 | 4.075940e-53 | -8.615850e-47 |
| Msa0427780 | Msa1024180 | 0.815801 | 7.675642e-52 | -8.615850e-47 |
| Msa1024180 | Msa1078870 | 0.806739 | 7.106930e-50 | -8.615850e-47 |
| Msa1024180 | Msa1104110 | 0.821940 | 3.089772e-53 | -8.615850e-47 |
| Msa1024180 | Msa1108020 | 0.877226 | 7.449631e-69 | -8.615850e-47 |
| Msa1024180 | Msa1120790 | 0.816516 | 5.311987e-52 | -8.615850e-47 |
| Msa1024180 | Msa1147700 | 0.814180 | 1.756976e-51 | -8.615850e-47 |
| Msa1024180 | Msa1152120 | 0.927449 | 1.157345e-91 | -8.615850e-47 |
| Msa1024180 | Msa1174780 | 0.816076 | 6.661346e-52 | -8.615850e-47 |
| Msa1024180 | Msa1203560 | 0.828533 | 8.528456e-55 | -8.615850e-47 |
| Msa1024180 | Msa1264360 | 0.809566 | 1.775848e-50 | -8.615850e-47 |
| Msa1024180 | Msa1284350 | 0.812451 | 4.211274e-51 | -8.615850e-47 |
| Msa1024180 | Msa1299590 | 0.807697 | 4.452922e-50 | -8.615850e-47 |
| Msa1024180 | Msa1314940 | 0.824699 | 7.007608e-54 | -8.615850e-47 |
| Msa1024180 | Msa1332250 | 0.831330 | 1.774839e-55 | -8.615850e-47 |
| Msa1024180 | Msa1343260 | 0.806162 | 9.404388e-50 | -8.615850e-47 |
| Msa1024180 | Msa1360960 | 0.825967 | 3.511416e-54 | -8.615850e-47 |
| Msa1024180 | Msa1414170 | 0.809486 | 1.847452e-50 | -8.615850e-47 |
| Msa1024180 | Msa1426120 | 0.805394 | 1.363697e-49 | -8.615850e-47 |
| Msa1024180 | Msa1462490 | 0.825027 | 5.862486e-54 | -8.615850e-47 |
| Msa0275070 | Msa1024180 | 0.802708 | 4.935488e-49 | -8.615850e-47 |
| Msa0484150 | Msa1024180 | 0.822837 | 1.912564e-53 | -8.615850e-47 |
| Msa0518590 | Msa1024180 | 0.809700 | 1.662315e-50 | -8.615850e-47 |
| Msa0532050 | Msa1024180 | 0.847669 | 9.992741e-60 | -8.615850e-47 |
| Msa0591170 | Msa1024180 | 0.809171 | 2.158538e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1024180 | MtrunA17_Chr7g0241881 | 99.620 | 527 | 2 | 0 | 1 | 527 | 1 | 527 | 0.0 | 1058 |
| Msa1024180 | MtrunA17_Chr7g0272821 | 98.102 | 527 | 10 | 0 | 1 | 527 | 1 | 527 | 0.0 | 1040 |
| Msa1024180 | MtrunA17_Chr5g0440381 | 36.450 | 524 | 312 | 8 | 6 | 516 | 11 | 526 | 3.18e-100 | 313 |
| Msa1024180 | MtrunA17_Chr8g0380331 | 34.915 | 527 | 312 | 9 | 14 | 516 | 15 | 534 | 1.46e-89 | 285 |
| Msa1024180 | MtrunA17_Chr3g0123341 | 33.333 | 522 | 334 | 8 | 6 | 517 | 14 | 531 | 1.31e-83 | 269 |
| Msa1024180 | MtrunA17_Chr3g0139481 | 31.944 | 504 | 281 | 7 | 20 | 517 | 26 | 473 | 1.05e-68 | 228 |
| Msa1024180 | MtrunA17_Chr7g0214841 | 30.435 | 506 | 330 | 8 | 27 | 516 | 26 | 525 | 2.18e-62 | 213 |
| Msa1024180 | MtrunA17_Chr2g0282161 | 29.167 | 528 | 348 | 11 | 6 | 517 | 7 | 524 | 3.11e-62 | 213 |
| Msa1024180 | MtrunA17_Chr6g0461541 | 28.916 | 498 | 341 | 8 | 30 | 520 | 33 | 524 | 6.20e-53 | 188 |
| Msa1024180 | MtrunA17_Chr1g0160221 | 28.257 | 499 | 343 | 8 | 30 | 520 | 36 | 527 | 1.12e-51 | 184 |
| Msa1024180 | MtrunA17_Chr3g0106681 | 86.076 | 79 | 6 | 1 | 385 | 458 | 54 | 132 | 5.46e-38 | 135 |
| Msa1024180 | MtrunA17_Chr7g0241851 | 86.765 | 68 | 9 | 0 | 362 | 429 | 1 | 68 | 1.68e-36 | 130 |
| Msa1024180 | MtrunA17_Chr8g0392171 | 29.470 | 302 | 181 | 7 | 190 | 485 | 3 | 278 | 3.90e-35 | 133 |
| Msa1024180 | MtrunA17_Chr1g0196761 | 24.077 | 569 | 327 | 22 | 16 | 525 | 40 | 562 | 6.14e-14 | 74.3 |
| Msa1024180 | MtrunA17_Chr1g0196751 | 22.598 | 562 | 344 | 20 | 16 | 525 | 40 | 562 | 3.01e-13 | 72.4 |
| Msa1024180 | MtrunA17_Chr8g0342341 | 23.704 | 540 | 333 | 17 | 16 | 509 | 41 | 547 | 4.02e-13 | 72.0 |
| Msa1024180 | MtrunA17_Chr7g0241861 | 83.019 | 53 | 9 | 0 | 239 | 291 | 1 | 53 | 3.15e-11 | 58.5 |
| Msa1024180 | MtrunA17_Chr1g0152151 | 36.434 | 129 | 74 | 3 | 26 | 148 | 65 | 191 | 4.85e-11 | 65.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1024180 | AT5G20890.1 | 88.994 | 527 | 58 | 0 | 1 | 527 | 1 | 527 | 0.0 | 941 |
| Msa1024180 | AT3G11830.1 | 36.731 | 520 | 316 | 7 | 6 | 516 | 11 | 526 | 3.46e-96 | 303 |
| Msa1024180 | AT3G20050.1 | 34.981 | 526 | 313 | 8 | 14 | 516 | 15 | 534 | 1.41e-95 | 301 |
| Msa1024180 | AT3G11830.2 | 36.538 | 520 | 315 | 8 | 6 | 516 | 11 | 524 | 6.38e-94 | 297 |
| Msa1024180 | AT3G18190.1 | 35.010 | 517 | 317 | 8 | 14 | 517 | 24 | 534 | 3.71e-89 | 284 |
| Msa1024180 | AT1G24510.1 | 32.634 | 524 | 329 | 9 | 8 | 517 | 18 | 531 | 2.92e-82 | 266 |
| Msa1024180 | AT1G24510.3 | 32.211 | 475 | 300 | 8 | 57 | 517 | 12 | 478 | 1.13e-70 | 234 |
| Msa1024180 | AT1G24510.2 | 31.533 | 463 | 295 | 8 | 69 | 517 | 1 | 455 | 4.78e-65 | 218 |
| Msa1024180 | AT3G02530.1 | 30.784 | 510 | 323 | 11 | 27 | 516 | 26 | 525 | 1.15e-63 | 217 |
| Msa1024180 | AT5G16070.1 | 30.368 | 517 | 331 | 11 | 27 | 524 | 26 | 532 | 8.40e-63 | 214 |
| Msa1024180 | AT5G26360.1 | 28.897 | 526 | 352 | 11 | 6 | 517 | 7 | 524 | 8.12e-57 | 199 |
| Msa1024180 | AT3G03960.1 | 28.916 | 498 | 341 | 9 | 30 | 520 | 39 | 530 | 1.03e-50 | 182 |
| Msa1024180 | AT2G33210.1 | 24.821 | 560 | 328 | 24 | 16 | 522 | 40 | 559 | 8.63e-17 | 84.0 |
| Msa1024180 | AT3G23990.1 | 24.460 | 556 | 333 | 20 | 16 | 521 | 39 | 557 | 7.57e-16 | 80.9 |
| Msa1024180 | AT2G33210.2 | 24.685 | 555 | 330 | 23 | 16 | 522 | 40 | 554 | 2.31e-15 | 79.3 |
| Msa1024180 | AT3G13470.1 | 37.069 | 116 | 65 | 3 | 26 | 136 | 70 | 182 | 9.31e-11 | 64.7 |
Find 153 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAGGGTTGTATTTGTAATT+TGG | 0.107433 | 7_1:-52741667 | Msa1024180:five_prime_UTR |
| GATCCCAGATTGCAAATTTC+TGG | 0.174620 | 7_1:+52736523 | None:intergenic |
| TCCTTTGCCATTACCATTTC+AGG | 0.181073 | 7_1:+52737416 | None:intergenic |
| TTTATTCTTGACAAGAAAAT+TGG | 0.237404 | 7_1:-52738553 | Msa1024180:CDS |
| AGCTAGCACCCAGGTGAAAA+AGG | 0.260140 | 7_1:+52736391 | None:intergenic |
| CTTTGCATTCTCTATGCGTT+TGG | 0.270372 | 7_1:+52738519 | None:intergenic |
| CTCCGGGTTTCTTTATAATC+TGG | 0.272773 | 7_1:+52738843 | None:intergenic |
| CTTGTCTTGCGAGAGAATTT+TGG | 0.272978 | 7_1:+52739561 | None:intergenic |
| TCTAGCTGCCAACTGGAATT+TGG | 0.281844 | 7_1:-52736313 | Msa1024180:three_prime_UTR |
| GGCTATGGCTATTGCTGATT+TGG | 0.287547 | 7_1:-52740838 | Msa1024180:CDS |
| TGTTATATTTCACGTGTCTT+TGG | 0.298463 | 7_1:-52736346 | Msa1024180:three_prime_UTR |
| CTTTGCTGATGCAGGAATAT+TGG | 0.298904 | 7_1:-52738296 | Msa1024180:CDS |
| AATCTGGACAGATTCTAAAT+TGG | 0.300526 | 7_1:+52738859 | None:intergenic |
| ATTCCTAAACATGTGCCTTT+AGG | 0.308483 | 7_1:+52736135 | None:intergenic |
| ACCTCTGTTGTTGTATTGGC+TGG | 0.330206 | 7_1:-52740535 | Msa1024180:CDS |
| GAGCGTCTGGCTCTGGTAAC+TGG | 0.330579 | 7_1:-52738244 | Msa1024180:CDS |
| TTATGATTTCATCGACTCTA+AGG | 0.332845 | 7_1:+52736644 | None:intergenic |
| ATTCTGTAGTGATTTGCTTT+TGG | 0.338766 | 7_1:+52736495 | None:intergenic |
| TTTGCATTCTCTATGCGTTT+GGG | 0.352812 | 7_1:+52738520 | None:intergenic |
| CCGTGTTCGTGTCGACTCTA+TGG | 0.366141 | 7_1:-52738443 | Msa1024180:CDS |
| GCATTATCAGCAATGGTTGT+TGG | 0.371197 | 7_1:+52737314 | None:intergenic |
| TTGTACAGTCATCATTTGTC+GGG | 0.379728 | 7_1:-52740860 | Msa1024180:intron |
| CTTGACAAGAAAATTGGTAT+TGG | 0.380814 | 7_1:-52738547 | Msa1024180:CDS |
| CTCTAACCGTTTAAATCAAC+TGG | 0.381070 | 7_1:-52736467 | Msa1024180:three_prime_UTR |
| GCATCAGCAAAGAGCTCCTC+TGG | 0.385618 | 7_1:+52738307 | None:intergenic |
| ATTCTGTCTTCTCTCCTCCT+TGG | 0.391078 | 7_1:+52736613 | None:intergenic |
| GAAAAGGTGAACAAGATAAT+AGG | 0.393726 | 7_1:-52738376 | Msa1024180:CDS |
| TTTCCAGAAATTTGCAATCT+GGG | 0.395250 | 7_1:-52736526 | Msa1024180:three_prime_UTR |
| CATTATCAGCAATGGTTGTT+GGG | 0.396407 | 7_1:+52737315 | None:intergenic |
| CAGCAGTACATCCCTCGTTC+TGG | 0.402972 | 7_1:+52737246 | None:intergenic |
| GAAAGGAGAGCGGGCGAGAA+TGG | 0.403189 | 7_1:-52741187 | Msa1024180:intron |
| AAAGCAAATCACTACAGAAT+TGG | 0.404992 | 7_1:-52736492 | Msa1024180:three_prime_UTR |
| AACTACCTCTGTTGTTGTAT+TGG | 0.419643 | 7_1:-52740539 | Msa1024180:CDS |
| GGTTGGAGACATGTTTCAAC+GGG | 0.423103 | 7_1:-52736734 | Msa1024180:CDS |
| TACCATTCCCTTTGGGCCTA+AGG | 0.426340 | 7_1:+52740806 | None:intergenic |
| CTTATTGAAGAGATTATGAT+TGG | 0.428527 | 7_1:-52738163 | Msa1024180:CDS |
| CCTCTGTTGTTGTATTGGCT+GGG | 0.432678 | 7_1:-52740534 | Msa1024180:CDS |
| CTTTCTAACCTGTGTCCTAA+AGG | 0.434093 | 7_1:-52736150 | Msa1024180:three_prime_UTR |
| GAAGGAGAAAATGAAAGAAA+AGG | 0.438401 | 7_1:-52738392 | Msa1024180:CDS |
| TTGTGACCAGTTGATTTAAA+CGG | 0.438938 | 7_1:+52736461 | None:intergenic |
| GAGGAGCTCTTTGCTGATGC+AGG | 0.439320 | 7_1:-52738304 | Msa1024180:CDS |
| GATAAAATTCTGCAGTCAAC+GGG | 0.441555 | 7_1:-52740688 | Msa1024180:CDS |
| TGGAGGCGGGTGGCCTGAAA+TGG | 0.444431 | 7_1:-52737429 | Msa1024180:CDS |
| TTCTGGTGTTGCAATGGGGC+AGG | 0.444806 | 7_1:-52738119 | Msa1024180:CDS |
| ACAGACAAGGTGAAGATATA+CGG | 0.446868 | 7_1:-52738469 | Msa1024180:CDS |
| TTTGTACAGTCATCATTTGT+CGG | 0.449738 | 7_1:-52740861 | Msa1024180:intron |
| GAACCTGCTATTATAGTCAT+TGG | 0.450616 | 7_1:+52740466 | None:intergenic |
| CGAGAGAGAGTTGGCTGGCT+AGG | 0.455761 | 7_1:+52741609 | None:intergenic |
| CTCAGACTGTCAATGATAGC+AGG | 0.455917 | 7_1:-52737460 | Msa1024180:CDS |
| GCTGGAATTGATGTCATCTC+TGG | 0.462467 | 7_1:-52737227 | Msa1024180:CDS |
| TGAGTCTATCAGTGATCCTC+CGG | 0.463023 | 7_1:+52738826 | None:intergenic |
| AATGATAGCAGGGTGTTACT+TGG | 0.464868 | 7_1:-52737449 | Msa1024180:CDS |
| GGCAAAGGAAATTGATGCAT+TGG | 0.465686 | 7_1:-52737402 | Msa1024180:CDS |
| GTATGAGTCTAGCTGCCAAC+TGG | 0.466560 | 7_1:-52736320 | Msa1024180:three_prime_UTR |
| GATGAAGCAAGTGAAGAGAA+AGG | 0.472529 | 7_1:-52741204 | Msa1024180:CDS |
| TGCCCAAGCTTAACAGACTC+AGG | 0.474350 | 7_1:+52738193 | None:intergenic |
| TTGGGATAGCCAAGAGTGCC+CGG | 0.474753 | 7_1:+52737333 | None:intergenic |
| AACCCTGAGTCTGTTAAGCT+TGG | 0.475389 | 7_1:-52738196 | Msa1024180:CDS |
| TTTAAGGGAGGCAGAAAAGT+TGG | 0.477988 | 7_1:-52740506 | Msa1024180:CDS |
| GCTAAAGTTGCTGAGATTGA+AGG | 0.478957 | 7_1:-52738421 | Msa1024180:CDS |
| GATTTGGTTAAGACTACCTT+AGG | 0.481337 | 7_1:-52740822 | Msa1024180:CDS |
| GTCATCATTTGTCGGGGCTA+TGG | 0.483139 | 7_1:-52740853 | Msa1024180:CDS |
| AGCAGGGTGTTACTTGGAGG+CGG | 0.483620 | 7_1:-52737443 | Msa1024180:CDS |
| AAAGTTCAAGATGATGAAGT+TGG | 0.486158 | 7_1:-52740568 | Msa1024180:CDS |
| TGATAATATTGTTTGAATGT+TGG | 0.486585 | 7_1:-52736251 | Msa1024180:three_prime_UTR |
| CTCTGTTGTTGTATTGGCTG+GGG | 0.488885 | 7_1:-52740533 | Msa1024180:CDS |
| TAATATTGTTTGAATGTTGG+TGG | 0.489932 | 7_1:-52736248 | Msa1024180:three_prime_UTR |
| TGGTATTGAGCGTCTGGCTC+TGG | 0.490993 | 7_1:-52738251 | Msa1024180:CDS |
| AGATGCTTGCCACCATGCCT+TGG | 0.499201 | 7_1:-52736562 | Msa1024180:intron |
| CATTGCTGATAATGCTGGAT+TGG | 0.503219 | 7_1:-52737306 | Msa1024180:CDS |
| ACCCTGAGTCTGTTAAGCTT+GGG | 0.506927 | 7_1:-52738195 | Msa1024180:CDS |
| ACAACCATTGCTGATAATGC+TGG | 0.508371 | 7_1:-52737311 | Msa1024180:CDS |
| CAGAACGAGGGATGTACTGC+TGG | 0.510419 | 7_1:-52737245 | Msa1024180:CDS |
| ATTCTGCAGTCAACGGGTAG+AGG | 0.514855 | 7_1:-52740682 | Msa1024180:CDS |
| TGAGATTGAAGGAGCTGAGA+AGG | 0.516192 | 7_1:-52738410 | Msa1024180:CDS |
| AAGTGAAGAGAAAGGAGAGC+GGG | 0.523721 | 7_1:-52741196 | Msa1024180:CDS |
| TCAACAAGGACTTTAGCAGC+AGG | 0.525303 | 7_1:+52740598 | None:intergenic |
| AACCGCTAGTACATTCATTG+AGG | 0.528642 | 7_1:+52736280 | None:intergenic |
| CCTCGTTCTGGTGCTCAGCA+CGG | 0.531696 | 7_1:+52737258 | None:intergenic |
| GAGCACACTCAGCCGCCATT+CGG | 0.533449 | 7_1:+52739834 | None:intergenic |
| AACTACGAAACCTAAAACAA+GGG | 0.537465 | 7_1:-52741684 | Msa1024180:five_prime_UTR |
| CGGGTGGCCTGAAATGGTAA+TGG | 0.539649 | 7_1:-52737423 | Msa1024180:CDS |
| GGATAAAATTCTGCAGTCAA+CGG | 0.542081 | 7_1:-52740689 | Msa1024180:CDS |
| CATCCAATGACTATAATAGC+AGG | 0.543016 | 7_1:-52740469 | Msa1024180:intron |
| TGAAGCATTCAAAGTCAAGC+AGG | 0.543590 | 7_1:-52736704 | Msa1024180:CDS |
| TACCTTAGGCCCAAAGGGAA+TGG | 0.543614 | 7_1:-52740808 | Msa1024180:intron |
| AAGACTACCTTAGGCCCAAA+GGG | 0.550690 | 7_1:-52740813 | Msa1024180:CDS |
| TGTATTGCTATCTGCAACAG+AGG | 0.552549 | 7_1:-52736680 | Msa1024180:CDS |
| GGGTGTTACTTGGAGGCGGG+TGG | 0.558203 | 7_1:-52737439 | Msa1024180:CDS |
| ATGACCTCTCAGCCTCATCA+AGG | 0.561780 | 7_1:+52737507 | None:intergenic |
| GATAGCAGGGTGTTACTTGG+AGG | 0.563489 | 7_1:-52737446 | Msa1024180:CDS |
| CAAAATTCTCTCGCAAGACA+AGG | 0.569659 | 7_1:-52739560 | Msa1024180:CDS |
| CAAGATGATGAAGTTGGCGA+TGG | 0.570613 | 7_1:-52740562 | Msa1024180:CDS |
| TTCTGCAGTCAACGGGTAGA+GGG | 0.570922 | 7_1:-52740681 | Msa1024180:CDS |
| CAATAGTTCTGAGAGGTGCT+AGG | 0.574201 | 7_1:-52738090 | Msa1024180:intron |
| TGTCAGAATTTGCCAAGGCA+TGG | 0.575862 | 7_1:+52736550 | None:intergenic |
| GCCTGAAATGGTAATGGCAA+AGG | 0.576296 | 7_1:-52737417 | Msa1024180:CDS |
| CAGCAGGGTTATCAATGTGA+AGG | 0.576716 | 7_1:+52740614 | None:intergenic |
| TAGACTTGATGAACATTGCA+AGG | 0.577688 | 7_1:-52739597 | Msa1024180:CDS |
| TGAAGAGATTATGATTGGTG+AGG | 0.578048 | 7_1:-52738158 | Msa1024180:CDS |
| AACAGACTCAGGGTTGTCAA+AGG | 0.580150 | 7_1:+52738204 | None:intergenic |
| AGCAGGGTTATCAATGTGAA+GGG | 0.582950 | 7_1:+52740615 | None:intergenic |
| GCAGGGTGTTACTTGGAGGC+GGG | 0.586668 | 7_1:-52737442 | Msa1024180:CDS |
| CAATCCAGCATTATCAGCAA+TGG | 0.589615 | 7_1:+52737307 | None:intergenic |
| TGCATTGGTAGAGAAGGTTG+TGG | 0.590099 | 7_1:-52739807 | Msa1024180:CDS |
| GTGAACAAGATAATAGGTCA+TGG | 0.590525 | 7_1:-52738370 | Msa1024180:CDS |
| CATCAGCAAAGAGCTCCTCT+GGG | 0.593588 | 7_1:+52738308 | None:intergenic |
| AAATCATAACTTGTGCTCCA+AGG | 0.594768 | 7_1:-52736630 | Msa1024180:CDS |
| AAGCGCGAGAGAGAGTTGGC+TGG | 0.595357 | 7_1:+52741604 | None:intergenic |
| TAGAAAGCGCGAGAGAGAGT+TGG | 0.596352 | 7_1:+52741600 | None:intergenic |
| TCAGACTGTCAATGATAGCA+GGG | 0.596838 | 7_1:-52737459 | Msa1024180:CDS |
| TAAGACTACCTTAGGCCCAA+AGG | 0.597137 | 7_1:-52740814 | Msa1024180:CDS |
| CATAGAGTCGACACGAACAC+GGG | 0.600968 | 7_1:+52738444 | None:intergenic |
| CCATAGAGTCGACACGAACA+CGG | 0.601800 | 7_1:+52738443 | None:intergenic |
| GTGGACAACAAAGAAGATGC+TGG | 0.604567 | 7_1:-52739788 | Msa1024180:intron |
| GAGTCTATCAGTGATCCTCC+GGG | 0.604779 | 7_1:+52738827 | None:intergenic |
| GAAGTTACTGTTACTAATGA+CGG | 0.604825 | 7_1:-52740655 | Msa1024180:CDS |
| CCGTGCTGAGCACCAGAACG+AGG | 0.605089 | 7_1:-52737258 | Msa1024180:CDS |
| TCAAATAGCCAAATTCCAGT+TGG | 0.605931 | 7_1:+52736305 | None:intergenic |
| GCCCAAGCTTAACAGACTCA+GGG | 0.607943 | 7_1:+52738194 | None:intergenic |
| TAACTACGAAACCTAAAACA+AGG | 0.611802 | 7_1:-52741685 | Msa1024180:five_prime_UTR |
| TCGTAATGCATTGGTAGAGA+AGG | 0.612856 | 7_1:-52739813 | Msa1024180:CDS |
| AGGTTGGAGACATGTTTCAA+CGG | 0.614227 | 7_1:-52736735 | Msa1024180:CDS |
| CAGCCACCATGTCCTTGATG+AGG | 0.616535 | 7_1:-52737519 | Msa1024180:CDS |
| CACTGCAATGGACACAGACA+AGG | 0.617081 | 7_1:-52738482 | Msa1024180:CDS |
| AACATGTGCCTTTAGGACAC+AGG | 0.617542 | 7_1:+52736142 | None:intergenic |
| ACTAGTTGCAAACACTGCAA+TGG | 0.618834 | 7_1:-52738494 | Msa1024180:CDS |
| TGGGATAGCCAAGAGTGCCC+GGG | 0.629291 | 7_1:+52737334 | None:intergenic |
| CAGAATTTGCCAAGGCATGG+TGG | 0.629534 | 7_1:+52736553 | None:intergenic |
| GTCCAGATTATAAAGAAACC+CGG | 0.629624 | 7_1:-52738845 | Msa1024180:CDS |
| CAACAAGGACTTTAGCAGCA+GGG | 0.631087 | 7_1:+52740599 | None:intergenic |
| TGTACAGTCATCATTTGTCG+GGG | 0.632087 | 7_1:-52740859 | Msa1024180:intron |
| TCTCAGCCTCATCAAGGACA+TGG | 0.634180 | 7_1:+52737513 | None:intergenic |
| TCATTGCATTTCACTCTCTG+AGG | 0.634791 | 7_1:-52741572 | Msa1024180:intron |
| TCATTGAGTTCTCACAATGG+CGG | 0.635158 | 7_1:-52741342 | Msa1024180:intron |
| TGAGTGTGCTCGTAATGCAT+TGG | 0.636791 | 7_1:-52739822 | Msa1024180:CDS |
| ATCCTCAATGAATGTACTAG+CGG | 0.642731 | 7_1:-52736282 | Msa1024180:three_prime_UTR |
| GAAAATGTCAGAATTTGCCA+AGG | 0.643026 | 7_1:+52736545 | None:intergenic |
| AGATGCTGTAATGAGACTAA+AGG | 0.646296 | 7_1:-52739515 | Msa1024180:intron |
| CAAGTGAAGAGAAAGGAGAG+CGG | 0.646384 | 7_1:-52741197 | Msa1024180:CDS |
| CGTGCTGAGCACCAGAACGA+GGG | 0.655321 | 7_1:-52737257 | Msa1024180:CDS |
| CAGCCTCATCAAGGACATGG+TGG | 0.656164 | 7_1:+52737516 | None:intergenic |
| ATGTCCTTGATGAGGCTGAG+AGG | 0.658084 | 7_1:-52737511 | Msa1024180:CDS |
| CGTCTGGCTCTGGTAACTGG+TGG | 0.662358 | 7_1:-52738241 | Msa1024180:CDS |
| ATTGCTATCTGCAACAGAGG+CGG | 0.662677 | 7_1:-52736677 | Msa1024180:CDS |
| TCATAACTTGTGCTCCAAGG+AGG | 0.680461 | 7_1:-52736627 | Msa1024180:CDS |
| GAACTTTAGAAATGTCAACA+AGG | 0.694485 | 7_1:+52740584 | None:intergenic |
| ATTTCATTGAGTTCTCACAA+TGG | 0.696935 | 7_1:-52741345 | Msa1024180:exon |
| CCCAGCCAATACAACAACAG+AGG | 0.708815 | 7_1:+52740534 | None:intergenic |
| GTTGATTTACAATTTCCCAG+AGG | 0.717017 | 7_1:-52738323 | Msa1024180:CDS |
| GCATGCACAATAGTTCTGAG+AGG | 0.722642 | 7_1:-52738097 | Msa1024180:CDS |
| CAGATTATAAAGAAACCCGG+AGG | 0.754428 | 7_1:-52738842 | Msa1024180:CDS |
| GTTGGAGACATGTTTCAACG+GGG | 0.797013 | 7_1:-52736733 | Msa1024180:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATTAAAAAAAATTAAATA+AGG | + | chr7_1:52736553-52736572 | None:intergenic | 0.0% |
| !! | AAAGTTTATCAGAATTATAA+AGG | + | chr7_1:52737845-52737864 | None:intergenic | 15.0% |
| !! | ATCAATATATTTGACATTAT+CGG | - | chr7_1:52737957-52737976 | Msa1024180:intron | 15.0% |
| !!! | TATCTTATACATAAATTTTC+TGG | - | chr7_1:52738190-52738209 | Msa1024180:CDS | 15.0% |
| !!! | ATTTTAGAAAAATATCATGT+AGG | - | chr7_1:52741002-52741021 | Msa1024180:intron | 15.0% |
| !!! | AAACTTTTTGTAATATCATA+CGG | - | chr7_1:52741606-52741625 | Msa1024180:five_prime_UTR | 15.0% |
| !! | AACTAATTGTGTTTATGAAT+TGG | - | chr7_1:52736946-52736965 | Msa1024180:intron | 20.0% |
| !! | AACTAAGTAATTCACATATT+TGG | - | chr7_1:52737106-52737125 | Msa1024180:intron | 20.0% |
| !! | ACTAAGTAATTCACATATTT+GGG | - | chr7_1:52737107-52737126 | Msa1024180:intron | 20.0% |
| !! | CCTTAATTTAATTACAAAGA+TGG | + | chr7_1:52737603-52737622 | None:intergenic | 20.0% |
| !! | CCATCTTTGTAATTAAATTA+AGG | - | chr7_1:52737600-52737619 | Msa1024180:intron | 20.0% |
| !! | TGAGTAAAAAGTAAAAATTG+TGG | - | chr7_1:52737768-52737787 | Msa1024180:intron | 20.0% |
| !! | GAGTAAAAAGTAAAAATTGT+GGG | - | chr7_1:52737769-52737788 | Msa1024180:intron | 20.0% |
| !!! | AATGATAACGATAAATTCAA+AGG | + | chr7_1:52738115-52738134 | None:intergenic | 20.0% |
| !!! | CGTATCAAATTTTTATAAAC+TGG | + | chr7_1:52738455-52738474 | None:intergenic | 20.0% |
| !!! | AAGAATGGATTATAAATTGT+AGG | + | chr7_1:52738567-52738586 | None:intergenic | 20.0% |
| !! | CTATGTACATATTATAAGAA+TGG | + | chr7_1:52738582-52738601 | None:intergenic | 20.0% |
| !!! | ATTTCCATTTTCATATTACA+GGG | - | chr7_1:52738944-52738963 | Msa1024180:intron | 20.0% |
| !!! | TAGTATTTCTGTTTCTAAAT+TGG | - | chr7_1:52739237-52739256 | Msa1024180:intron | 20.0% |
| !! | TTTATTCTTGACAAGAAAAT+TGG | - | chr7_1:52739278-52739297 | Msa1024180:intron | 20.0% |
| !! | GAATTTACAATGACAAAAAA+AGG | + | chr7_1:52739774-52739793 | None:intergenic | 20.0% |
| !! | AATATGTAAAAGAACAACAT+TGG | + | chr7_1:52739801-52739820 | None:intergenic | 20.0% |
| !!! | TTTTTTTTCTTGAATTCTTG+AGG | - | chr7_1:52739827-52739846 | Msa1024180:CDS | 20.0% |
| !! | TTTATTGAAGGTTAATGTAA+AGG | - | chr7_1:52739964-52739983 | Msa1024180:intron | 20.0% |
| !!! | TCATTCTATAATCTTTTTCT+TGG | - | chr7_1:52740663-52740682 | Msa1024180:CDS | 20.0% |
| !! | TGATAATATTGTTTGAATGT+TGG | - | chr7_1:52741580-52741599 | Msa1024180:five_prime_UTR | 20.0% |
| ! | AGTTTGGATTATTGAAGTTA+GGG | + | chr7_1:52736403-52736422 | None:intergenic | 25.0% |
| !! | GTGTATTTATCAATTTTTGC+AGG | - | chr7_1:52736452-52736471 | Msa1024180:three_prime_UTR | 25.0% |
| !! | AAAATTTTACCATTCCCTTT+GGG | + | chr7_1:52737035-52737054 | None:intergenic | 25.0% |
| !! | TATGTGAATTACTTAGTTCT+TGG | + | chr7_1:52737104-52737123 | None:intergenic | 25.0% |
| ! | ACAATATGCATAAAACATCA+GGG | + | chr7_1:52737490-52737509 | None:intergenic | 25.0% |
| ! | TACAATATGCATAAAACATC+AGG | + | chr7_1:52737491-52737510 | None:intergenic | 25.0% |
| ! | TTGTACATAAGATCTTTCTT+TGG | - | chr7_1:52737506-52737525 | Msa1024180:CDS | 25.0% |
| ! | ATTAAGGACCAATTTATTGA+TGG | - | chr7_1:52737616-52737635 | Msa1024180:intron | 25.0% |
| !!! | ATTTCAGTTTTTTCTTTCCA+AGG | - | chr7_1:52737680-52737699 | Msa1024180:intron | 25.0% |
| ! | AACTAAAGGAAGAATAAAAG+TGG | + | chr7_1:52737709-52737728 | None:intergenic | 25.0% |
| !! | CTTTTATTCTTCCTTTAGTT+TGG | - | chr7_1:52737709-52737728 | Msa1024180:intron | 25.0% |
| !!! | TTACTTTTTACTCATCTTTC+AGG | + | chr7_1:52737762-52737781 | None:intergenic | 25.0% |
| !! | AAAGCATCAAAGTTTGATAA+TGG | - | chr7_1:52737807-52737826 | Msa1024180:intron | 25.0% |
| !! | CATTATCGGATATGATTTTT+AGG | - | chr7_1:52737971-52737990 | Msa1024180:intron | 25.0% |
| ! | AATTGGACACATTATTAGTA+GGG | + | chr7_1:52738362-52738381 | None:intergenic | 25.0% |
| ! | AAATTGGACACATTATTAGT+AGG | + | chr7_1:52738363-52738382 | None:intergenic | 25.0% |
| !! | AATAATGTGTCCAATTTTGA+TGG | - | chr7_1:52738366-52738385 | Msa1024180:CDS | 25.0% |
| ! | TTTGCTAAATCCATCAAAAT+TGG | + | chr7_1:52738379-52738398 | None:intergenic | 25.0% |
| !! | TATATACTTTTCTGCATGAT+TGG | - | chr7_1:52738484-52738503 | Msa1024180:CDS | 25.0% |
| !!! | GTGTGTTTTATTTAGAAATC+TGG | - | chr7_1:52738521-52738540 | Msa1024180:CDS | 25.0% |
| ! | TTAGAAAACTGAAAAAACTG+TGG | + | chr7_1:52738631-52738650 | None:intergenic | 25.0% |
| ! | TAATTTCATGATAGCTAGTT+TGG | - | chr7_1:52738653-52738672 | Msa1024180:intron | 25.0% |
| !! | AATTTCATGATAGCTAGTTT+GGG | - | chr7_1:52738654-52738673 | Msa1024180:intron | 25.0% |
| ! | TAAACGATATTCACTGATAA+GGG | - | chr7_1:52738692-52738711 | Msa1024180:intron | 25.0% |
| ! | AATGAAATACTCTTATAACC+TGG | + | chr7_1:52738739-52738758 | None:intergenic | 25.0% |
| !! | CATTTCCATTTTCATATTAC+AGG | - | chr7_1:52738943-52738962 | Msa1024180:intron | 25.0% |
| !!! | ATAGACTCATTTTTAGATGA+AGG | - | chr7_1:52739019-52739038 | Msa1024180:intron | 25.0% |
| !!! | TAGACTCATTTTTAGATGAA+GGG | - | chr7_1:52739020-52739039 | Msa1024180:intron | 25.0% |
| ! | GGGTAATATTACTGAAAATT+TGG | - | chr7_1:52739040-52739059 | Msa1024180:intron | 25.0% |
| !!! | CAATATTTTGAATTCAGTCA+AGG | + | chr7_1:52739165-52739184 | None:intergenic | 25.0% |
| ! | ATTATACAGGATAGTTAAGT+TGG | + | chr7_1:52739188-52739207 | None:intergenic | 25.0% |
| ! | ATACAAATGGTTCATTATAC+AGG | + | chr7_1:52739201-52739220 | None:intergenic | 25.0% |
| ! | CTTATTGAAGAGATTATGAT+TGG | - | chr7_1:52739668-52739687 | Msa1024180:intron | 25.0% |
| !! | GATAAATTGATCAAGTTTTC+TGG | - | chr7_1:52739695-52739714 | Msa1024180:intron | 25.0% |
| !! | TGTTGTTCTTTTACATATTC+AGG | - | chr7_1:52739802-52739821 | Msa1024180:CDS | 25.0% |
| !! | GTTGTTCTTTTACATATTCA+GGG | - | chr7_1:52739803-52739822 | Msa1024180:CDS | 25.0% |
| ! | AGCACAAAAACTGAATAAAA+GGG | + | chr7_1:52739942-52739961 | None:intergenic | 25.0% |
| !! | CTTCCTTTCTATTTTCTTTT+TGG | - | chr7_1:52741041-52741060 | Msa1024180:intron | 25.0% |
| ! | TAGCCAAAAAGAAAATAGAA+AGG | + | chr7_1:52741047-52741066 | None:intergenic | 25.0% |
| ! | TAATATTGTTTGAATGTTGG+TGG | - | chr7_1:52741583-52741602 | Msa1024180:five_prime_UTR | 25.0% |
| TAACTACGAAACCTAAAACA+AGG | - | chr7_1:52736146-52736165 | Msa1024180:three_prime_UTR | 30.0% | |
| AACTACGAAACCTAAAACAA+GGG | - | chr7_1:52736147-52736166 | Msa1024180:three_prime_UTR | 30.0% | |
| !!! | ACAAATACAACCCTTGTTTT+AGG | + | chr7_1:52736160-52736179 | None:intergenic | 30.0% |
| CAAGGGTTGTATTTGTAATT+TGG | - | chr7_1:52736164-52736183 | Msa1024180:three_prime_UTR | 30.0% | |
| TGAGATCGAGAACAAAAAAA+AGG | + | chr7_1:52736367-52736386 | None:intergenic | 30.0% | |
| GAGTTTGGATTATTGAAGTT+AGG | + | chr7_1:52736404-52736423 | None:intergenic | 30.0% | |
| AGTGGTGATTGATTATGTAA+CGG | - | chr7_1:52736427-52736446 | Msa1024180:three_prime_UTR | 30.0% | |
| ATTTCATTGAGTTCTCACAA+TGG | - | chr7_1:52736486-52736505 | Msa1024180:three_prime_UTR | 30.0% | |
| CTTCTGATCAAAAATGTGTT+TGG | - | chr7_1:52736750-52736769 | Msa1024180:intron | 30.0% | |
| TTTGATGTAATCACATGTGT+TGG | + | chr7_1:52736804-52736823 | None:intergenic | 30.0% | |
| TTTGTACAGTCATCATTTGT+CGG | - | chr7_1:52736970-52736989 | Msa1024180:intron | 30.0% | |
| ! | GAAAATTTTACCATTCCCTT+TGG | + | chr7_1:52737036-52737055 | None:intergenic | 30.0% |
| GAAGTTACTGTTACTAATGA+CGG | - | chr7_1:52737176-52737195 | Msa1024180:intron | 30.0% | |
| ! | GAACTTTAGAAATGTCAACA+AGG | + | chr7_1:52737250-52737269 | None:intergenic | 30.0% |
| AAAGTTCAAGATGATGAAGT+TGG | - | chr7_1:52737263-52737282 | Msa1024180:CDS | 30.0% | |
| AAGGTTAATTTCCTAACACT+CGG | + | chr7_1:52737419-52737438 | None:intergenic | 30.0% | |
| AGCAATTCAATTACTTGTCA+AGG | + | chr7_1:52737438-52737457 | None:intergenic | 30.0% | |
| GATCACATCCATCAATAAAT+TGG | + | chr7_1:52737627-52737646 | None:intergenic | 30.0% | |
| TGACAATGAAACCAAACTAA+AGG | + | chr7_1:52737723-52737742 | None:intergenic | 30.0% | |
| !!! | ATGATTTTTAGGTTTCCGAA+TGG | - | chr7_1:52737982-52738001 | Msa1024180:intron | 30.0% |
| !! | CTGGTATTTATTTTCCCTTT+TGG | - | chr7_1:52738062-52738081 | Msa1024180:intron | 30.0% |
| ! | TATTTTCCCTTTTGGATGTT+AGG | - | chr7_1:52738070-52738089 | Msa1024180:intron | 30.0% |
| AATTGTTATCTGTTTACAGC+AGG | - | chr7_1:52738137-52738156 | Msa1024180:CDS | 30.0% | |
| ATTGTTATCTGTTTACAGCA+GGG | - | chr7_1:52738138-52738157 | Msa1024180:CDS | 30.0% | |
| TGGATTTAGCAAATAGTGTA+TGG | - | chr7_1:52738386-52738405 | Msa1024180:CDS | 30.0% | |
| ATGAAGCAAAGAAGAAATCA+TGG | + | chr7_1:52738419-52738438 | None:intergenic | 30.0% | |
| AAGGATTGGAAGAAATTGAA+GGG | + | chr7_1:52738605-52738624 | None:intergenic | 30.0% | |
| GTAAACGATATTCACTGATA+AGG | - | chr7_1:52738691-52738710 | Msa1024180:intron | 30.0% | |
| !! | AACATGGTTATATTTTTGCC+AGG | - | chr7_1:52738718-52738737 | Msa1024180:intron | 30.0% |
| AAGAACATTAGAACAAACTG+TGG | + | chr7_1:52738790-52738809 | None:intergenic | 30.0% | |
| TTACAAATATGCTATACGTC+AGG | - | chr7_1:52738866-52738885 | Msa1024180:CDS | 30.0% | |
| AATCTGGACAGATTCTAAAT+TGG | + | chr7_1:52738975-52738994 | None:intergenic | 30.0% | |
| AATACAAAAGAAAAAACCGC+AGG | + | chr7_1:52739117-52739136 | None:intergenic | 30.0% | |
| TTTACCTAGAGTGATACAAA+TGG | + | chr7_1:52739214-52739233 | None:intergenic | 30.0% | |
| CTTGACAAGAAAATTGGTAT+TGG | - | chr7_1:52739284-52739303 | Msa1024180:intron | 30.0% | |
| GAAGGAGAAAATGAAAGAAA+AGG | - | chr7_1:52739439-52739458 | Msa1024180:intron | 30.0% | |
| GAAAAGGTGAACAAGATAAT+AGG | - | chr7_1:52739455-52739474 | Msa1024180:intron | 30.0% | |
| GTAAAAGAACAACATTGGAA+AGG | + | chr7_1:52739796-52739815 | None:intergenic | 30.0% | |
| ! | TTCTTGAGGTTTTCTTATTC+TGG | - | chr7_1:52739841-52739860 | Msa1024180:CDS | 30.0% |
| CAGCACAAAAACTGAATAAA+AGG | + | chr7_1:52739943-52739962 | None:intergenic | 30.0% | |
| ! | CTTTTATTCAGTTTTTGTGC+TGG | - | chr7_1:52739941-52739960 | Msa1024180:intron | 30.0% |
| !!! | TTTTTGTGCTGGTTTATTGA+AGG | - | chr7_1:52739952-52739971 | Msa1024180:intron | 30.0% |
| CTTATAATCATTGAGTCCAA+TGG | - | chr7_1:52740066-52740085 | Msa1024180:intron | 30.0% | |
| ATAAAAAACAGTAAGGAGCA+GGG | + | chr7_1:52740185-52740204 | None:intergenic | 30.0% | |
| !!! | ATTGCAAGAGATTTTTTTCC+TGG | + | chr7_1:52740466-52740485 | None:intergenic | 30.0% |
| AGGAAAAAAATCTCTTGCAA+TGG | - | chr7_1:52740465-52740484 | Msa1024180:intron | 30.0% | |
| AAAAAAATCTCTTGCAATGG+AGG | - | chr7_1:52740468-52740487 | Msa1024180:intron | 30.0% | |
| TAATTAGATTTACTCCCTAG+TGG | - | chr7_1:52740801-52740820 | Msa1024180:intron | 30.0% | |
| !! | TTATGATTTCATCGACTCTA+AGG | + | chr7_1:52741190-52741209 | None:intergenic | 30.0% |
| ! | TTTTCCAGAAATTTGCAATC+TGG | - | chr7_1:52741304-52741323 | Msa1024180:intron | 30.0% |
| TTTCCAGAAATTTGCAATCT+GGG | - | chr7_1:52741305-52741324 | Msa1024180:intron | 30.0% | |
| !!! | ATTCTGTAGTGATTTGCTTT+TGG | + | chr7_1:52741339-52741358 | None:intergenic | 30.0% |
| AAAGCAAATCACTACAGAAT+TGG | - | chr7_1:52741339-52741358 | Msa1024180:intron | 30.0% | |
| ! | TTGTGACCAGTTGATTTAAA+CGG | + | chr7_1:52741373-52741392 | None:intergenic | 30.0% |
| TGTTATATTTCACGTGTCTT+TGG | - | chr7_1:52741485-52741504 | Msa1024180:intron | 30.0% | |
| CAATAATCCAAACTCTGTAG+TGG | - | chr7_1:52736409-52736428 | Msa1024180:three_prime_UTR | 35.0% | |
| GTGGTGATTGATTATGTAAC+GGG | - | chr7_1:52736428-52736447 | Msa1024180:three_prime_UTR | 35.0% | |
| TGGTGATTGATTATGTAACG+GGG | - | chr7_1:52736429-52736448 | Msa1024180:three_prime_UTR | 35.0% | |
| !! | TGTTCGCTTTGGAATTGTAT+TGG | - | chr7_1:52736703-52736722 | Msa1024180:CDS | 35.0% |
| !! | GTCATTTTCATGTGAGTCTA+CGG | - | chr7_1:52736907-52736926 | Msa1024180:intron | 35.0% |
| TTGTACAGTCATCATTTGTC+GGG | - | chr7_1:52736971-52736990 | Msa1024180:intron | 35.0% | |
| ! | GATTTGGTTAAGACTACCTT+AGG | - | chr7_1:52737009-52737028 | Msa1024180:intron | 35.0% |
| ! | ATATTTGGGATGATGTTTGC+AGG | - | chr7_1:52737121-52737140 | Msa1024180:intron | 35.0% |
| GGATAAAATTCTGCAGTCAA+CGG | - | chr7_1:52737142-52737161 | Msa1024180:intron | 35.0% | |
| GATAAAATTCTGCAGTCAAC+GGG | - | chr7_1:52737143-52737162 | Msa1024180:intron | 35.0% | |
| AACTACCTCTGTTGTTGTAT+TGG | - | chr7_1:52737292-52737311 | Msa1024180:CDS | 35.0% | |
| CATCCAATGACTATAATAGC+AGG | - | chr7_1:52737362-52737381 | Msa1024180:CDS | 35.0% | |
| GAACCTGCTATTATAGTCAT+TGG | + | chr7_1:52737368-52737387 | None:intergenic | 35.0% | |
| ! | TAGTTTGGTTTCATTGTCAG+CGG | - | chr7_1:52737724-52737743 | Msa1024180:intron | 35.0% |
| TCATCTTTCAGGAAGATGAA+TGG | + | chr7_1:52737751-52737770 | None:intergenic | 35.0% | |
| !!! | ATTTTTAGGTTTCCGAATGG+CGG | - | chr7_1:52737985-52738004 | Msa1024180:intron | 35.0% |
| GGTAAACCTAACATCCAAAA+GGG | + | chr7_1:52738079-52738098 | None:intergenic | 35.0% | |
| TGGTAAACCTAACATCCAAA+AGG | + | chr7_1:52738080-52738099 | None:intergenic | 35.0% | |
| TTGGATGTTAGGTTTACCAT+TGG | - | chr7_1:52738081-52738100 | Msa1024180:intron | 35.0% | |
| ! | TGGATTTTGCAGAGAAATTC+AGG | - | chr7_1:52738210-52738229 | Msa1024180:CDS | 35.0% |
| TAGACTTGATGAACATTGCA+AGG | - | chr7_1:52738234-52738253 | Msa1024180:CDS | 35.0% | |
| AGATGCTGTAATGAGACTAA+AGG | - | chr7_1:52738316-52738335 | Msa1024180:CDS | 35.0% | |
| GTAATGAGACTAAAGGTGAT+TGG | - | chr7_1:52738323-52738342 | Msa1024180:CDS | 35.0% | |
| CACATTATTAGTAGGGTAGT+CGG | + | chr7_1:52738355-52738374 | None:intergenic | 35.0% | |
| CAAGGATTGGAAGAAATTGA+AGG | + | chr7_1:52738606-52738625 | None:intergenic | 35.0% | |
| AAAAACTGTGGTTCAAGGAT+TGG | + | chr7_1:52738619-52738638 | None:intergenic | 35.0% | |
| ACTGAAAAAACTGTGGTTCA+AGG | + | chr7_1:52738624-52738643 | None:intergenic | 35.0% | |
| TTAGAACAAACTGTGGTTCA+AGG | + | chr7_1:52738783-52738802 | None:intergenic | 35.0% | |
| GCTTCCCTGTAATATGAAAA+TGG | + | chr7_1:52738951-52738970 | None:intergenic | 35.0% | |
| GTCCAGATTATAAAGAAACC+CGG | - | chr7_1:52738986-52739005 | Msa1024180:intron | 35.0% | |
| !!! | CTATCCTTTTTTGAAACCTG+CGG | - | chr7_1:52739098-52739117 | Msa1024180:intron | 35.0% |
| AAAACCGCAGGTTTCAAAAA+AGG | + | chr7_1:52739105-52739124 | None:intergenic | 35.0% | |
| TGAACCATTTGTATCACTCT+AGG | - | chr7_1:52739207-52739226 | Msa1024180:intron | 35.0% | |
| TTTGCATTCTCTATGCGTTT+GGG | + | chr7_1:52739314-52739333 | None:intergenic | 35.0% | |
| ACAGACAAGGTGAAGATATA+CGG | - | chr7_1:52739362-52739381 | Msa1024180:intron | 35.0% | |
| GTGAACAAGATAATAGGTCA+TGG | - | chr7_1:52739461-52739480 | Msa1024180:intron | 35.0% | |
| !! | GCATCAACTGTTTTGTTAAC+AGG | - | chr7_1:52739483-52739502 | Msa1024180:intron | 35.0% |
| ! | GTTGATTTACAATTTCCCAG+AGG | - | chr7_1:52739508-52739527 | Msa1024180:intron | 35.0% |
| !!! | ATTGAGCATGCTGATTTTGA+TGG | - | chr7_1:52739560-52739579 | Msa1024180:CDS | 35.0% |
| TGAAGAGATTATGATTGGTG+AGG | - | chr7_1:52739673-52739692 | Msa1024180:intron | 35.0% | |
| !!! | AAGTTTTCTGGTGTTGCAAT+GGG | - | chr7_1:52739707-52739726 | Msa1024180:intron | 35.0% |
| AAGCAGTCTAGTTAAACCAT+TGG | + | chr7_1:52740085-52740104 | None:intergenic | 35.0% | |
| CATAAAAAACAGTAAGGAGC+AGG | + | chr7_1:52740186-52740205 | None:intergenic | 35.0% | |
| !!! | CTGCTCCTTACTGTTTTTTA+TGG | - | chr7_1:52740184-52740203 | Msa1024180:intron | 35.0% |
| CGAAGCCATAAAAAACAGTA+AGG | + | chr7_1:52740192-52740211 | None:intergenic | 35.0% | |
| CATTATCAGCAATGGTTGTT+GGG | + | chr7_1:52740519-52740538 | None:intergenic | 35.0% | |
| ! | CTGGTCATTCATAGTGATTT+TGG | - | chr7_1:52740718-52740737 | Msa1024180:intron | 35.0% |
| GAGTTAGGATGTGTATGATA+GGG | - | chr7_1:52740832-52740851 | Msa1024180:CDS | 35.0% | |
| AGCCTCTCATATTATTCAGT+GGG | + | chr7_1:52740868-52740887 | None:intergenic | 35.0% | |
| AAGCCTCTCATATTATTCAG+TGG | + | chr7_1:52740869-52740888 | None:intergenic | 35.0% | |
| TCTCAAAAACTAGTTGCCAA+GGG | + | chr7_1:52740922-52740941 | None:intergenic | 35.0% | |
| TTCTCAAAAACTAGTTGCCA+AGG | + | chr7_1:52740923-52740942 | None:intergenic | 35.0% | |
| AAATCGCTCGTACATATACT+CGG | + | chr7_1:52740964-52740983 | None:intergenic | 35.0% | |
| ! | ATGTACGAGCGATTTTACAA+AGG | - | chr7_1:52740969-52740988 | Msa1024180:intron | 35.0% |
| ! | AAATCATAACTTGTGCTCCA+AGG | - | chr7_1:52741201-52741220 | Msa1024180:CDS | 35.0% |
| GAAAATGTCAGAATTTGCCA+AGG | + | chr7_1:52741289-52741308 | None:intergenic | 35.0% | |
| CTCTAACCGTTTAAATCAAC+TGG | - | chr7_1:52741364-52741383 | Msa1024180:intron | 35.0% | |
| !! | ATGTCATTTCCTTTTTCACC+TGG | - | chr7_1:52741431-52741450 | Msa1024180:intron | 35.0% |
| !! | TGTCATTTCCTTTTTCACCT+GGG | - | chr7_1:52741432-52741451 | Msa1024180:intron | 35.0% |
| TCAAATAGCCAAATTCCAGT+TGG | + | chr7_1:52741529-52741548 | None:intergenic | 35.0% | |
| ATCCTCAATGAATGTACTAG+CGG | - | chr7_1:52741549-52741568 | Msa1024180:intron | 35.0% | |
| TCATTGCATTTCACTCTCTG+AGG | - | chr7_1:52736259-52736278 | Msa1024180:three_prime_UTR | 40.0% | |
| TCAATCACCACTACAGAGTT+TGG | + | chr7_1:52736419-52736438 | None:intergenic | 40.0% | |
| GGTGATTGATTATGTAACGG+GGG | - | chr7_1:52736430-52736449 | Msa1024180:three_prime_UTR | 40.0% | |
| TCATTGAGTTCTCACAATGG+CGG | - | chr7_1:52736489-52736508 | Msa1024180:three_prime_UTR | 40.0% | |
| GATGAAGCAAGTGAAGAGAA+AGG | - | chr7_1:52736627-52736646 | Msa1024180:CDS | 40.0% | |
| TCATTGTGATGTGTTCGCTT+TGG | - | chr7_1:52736692-52736711 | Msa1024180:CDS | 40.0% | |
| GAAATATTAGCTATGACGCG+TGG | + | chr7_1:52736879-52736898 | None:intergenic | 40.0% | |
| TGTACAGTCATCATTTGTCG+GGG | - | chr7_1:52736972-52736991 | Msa1024180:intron | 40.0% | |
| AGCAGGGTTATCAATGTGAA+GGG | + | chr7_1:52737219-52737238 | None:intergenic | 40.0% | |
| TTTAAGGGAGGCAGAAAAGT+TGG | - | chr7_1:52737325-52737344 | Msa1024180:CDS | 40.0% | |
| TGATTCACATTCCGAGTGTT+AGG | - | chr7_1:52737405-52737424 | Msa1024180:CDS | 40.0% | |
| AAACATCAGGGTAGACGATA+AGG | + | chr7_1:52737478-52737497 | None:intergenic | 40.0% | |
| AAGAATAAAAGTGGCAGCCT+TGG | + | chr7_1:52737700-52737719 | None:intergenic | 40.0% | |
| ACAGAAAACTGCAGTATGGA+CGG | + | chr7_1:52737887-52737906 | None:intergenic | 40.0% | |
| CATGACAGAAAACTGCAGTA+TGG | + | chr7_1:52737891-52737910 | None:intergenic | 40.0% | |
| ! | CTGCAGTTTTCTGTCATGTT+TGG | - | chr7_1:52737893-52737912 | Msa1024180:intron | 40.0% |
| ! | TCGTAATGCATTGGTAGAGA+AGG | - | chr7_1:52738018-52738037 | Msa1024180:intron | 40.0% |
| ! | CTTGTCTTGCGAGAGAATTT+TGG | + | chr7_1:52738273-52738292 | None:intergenic | 40.0% |
| CAAAATTCTCTCGCAAGACA+AGG | - | chr7_1:52738271-52738290 | Msa1024180:CDS | 40.0% | |
| ! | ATCGTTTACAAAGCACTCCA+AGG | + | chr7_1:52738680-52738699 | None:intergenic | 40.0% |
| TCACTGATAAGGGTTGAACA+TGG | - | chr7_1:52738702-52738721 | Msa1024180:intron | 40.0% | |
| CTCCGGGTTTCTTTATAATC+TGG | + | chr7_1:52738991-52739010 | None:intergenic | 40.0% | |
| CAGATTATAAAGAAACCCGG+AGG | - | chr7_1:52738989-52739008 | Msa1024180:intron | 40.0% | |
| CTTTGCATTCTCTATGCGTT+TGG | + | chr7_1:52739315-52739334 | None:intergenic | 40.0% | |
| ACTAGTTGCAAACACTGCAA+TGG | - | chr7_1:52739337-52739356 | Msa1024180:intron | 40.0% | |
| GCTAAAGTTGCTGAGATTGA+AGG | - | chr7_1:52739410-52739429 | Msa1024180:intron | 40.0% | |
| CTTTGCTGATGCAGGAATAT+TGG | - | chr7_1:52739535-52739554 | Msa1024180:CDS | 40.0% | |
| !! | TTTTGATGGTATTGAGCGTC+TGG | - | chr7_1:52739574-52739593 | Msa1024180:CDS | 40.0% |
| !!! | CAAGTTTTCTGGTGTTGCAA+TGG | - | chr7_1:52739706-52739725 | Msa1024180:intron | 40.0% |
| !!! | AGTTTTCTGGTGTTGCAATG+GGG | - | chr7_1:52739708-52739727 | Msa1024180:intron | 40.0% |
| TTCGATCAATGCATTTGAGC+TGG | - | chr7_1:52740208-52740227 | Msa1024180:intron | 40.0% | |
| GCATTTGAGCTGGATATGTA+TGG | - | chr7_1:52740218-52740237 | Msa1024180:intron | 40.0% | |
| !!! | AAGCCTGACATCTGTTTTTG+TGG | - | chr7_1:52740289-52740308 | Msa1024180:intron | 40.0% |
| TCAGACTGTCAATGATAGCA+GGG | - | chr7_1:52740372-52740391 | Msa1024180:intron | 40.0% | |
| !! | AATGATAGCAGGGTGTTACT+TGG | - | chr7_1:52740382-52740401 | Msa1024180:intron | 40.0% |
| TCCTTTGCCATTACCATTTC+AGG | + | chr7_1:52740418-52740437 | None:intergenic | 40.0% | |
| GGCAAAGGAAATTGATGCAT+TGG | - | chr7_1:52740429-52740448 | Msa1024180:intron | 40.0% | |
| GCATTATCAGCAATGGTTGT+TGG | + | chr7_1:52740520-52740539 | None:intergenic | 40.0% | |
| ! | ACAACCATTGCTGATAATGC+TGG | - | chr7_1:52740520-52740539 | Msa1024180:CDS | 40.0% |
| CAATCCAGCATTATCAGCAA+TGG | + | chr7_1:52740527-52740546 | None:intergenic | 40.0% | |
| ! | CATTGCTGATAATGCTGGAT+TGG | - | chr7_1:52740525-52740544 | Msa1024180:CDS | 40.0% |
| TAACTCCACTGTATCCACTA+GGG | + | chr7_1:52740818-52740837 | None:intergenic | 40.0% | |
| GGAGTTAGGATGTGTATGAT+AGG | - | chr7_1:52740831-52740850 | Msa1024180:CDS | 40.0% | |
| GATGTGTATGATAGGGACTT+TGG | - | chr7_1:52740839-52740858 | Msa1024180:CDS | 40.0% | |
| GTCCCACTGAATAATATGAG+AGG | - | chr7_1:52740863-52740882 | Msa1024180:intron | 40.0% | |
| GTGACTTGATTCTTTACCCT+TGG | - | chr7_1:52740903-52740922 | Msa1024180:intron | 40.0% | |
| ! | AACCTACGAGAAGTACACAT+CGG | + | chr7_1:52741081-52741100 | None:intergenic | 40.0% |
| AGGTTGGAGACATGTTTCAA+CGG | - | chr7_1:52741096-52741115 | Msa1024180:intron | 40.0% | |
| TGTATTGCTATCTGCAACAG+AGG | - | chr7_1:52741151-52741170 | Msa1024180:intron | 40.0% | |
| GATCCCAGATTGCAAATTTC+TGG | + | chr7_1:52741311-52741330 | None:intergenic | 40.0% | |
| AACCGCTAGTACATTCATTG+AGG | + | chr7_1:52741554-52741573 | None:intergenic | 40.0% | |
| CTTTCTAACCTGTGTCCTAA+AGG | - | chr7_1:52741681-52741700 | Msa1024180:five_prime_UTR | 40.0% | |
| CAAGTGAAGAGAAAGGAGAG+CGG | - | chr7_1:52736634-52736653 | Msa1024180:CDS | 45.0% | |
| AAGTGAAGAGAAAGGAGAGC+GGG | - | chr7_1:52736635-52736654 | Msa1024180:CDS | 45.0% | |
| CATGTGAGTCTACGGAAAGT+TGG | - | chr7_1:52736915-52736934 | Msa1024180:intron | 45.0% | |
| ! | GGCTATGGCTATTGCTGATT+TGG | - | chr7_1:52736993-52737012 | Msa1024180:intron | 45.0% |
| TAAGACTACCTTAGGCCCAA+AGG | - | chr7_1:52737017-52737036 | Msa1024180:intron | 45.0% | |
| AAGACTACCTTAGGCCCAAA+GGG | - | chr7_1:52737018-52737037 | Msa1024180:intron | 45.0% | |
| CAGCAGGGTTATCAATGTGA+AGG | + | chr7_1:52737220-52737239 | None:intergenic | 45.0% | |
| CAACAAGGACTTTAGCAGCA+GGG | + | chr7_1:52737235-52737254 | None:intergenic | 45.0% | |
| TCAACAAGGACTTTAGCAGC+AGG | + | chr7_1:52737236-52737255 | None:intergenic | 45.0% | |
| CAAGATGATGAAGTTGGCGA+TGG | - | chr7_1:52737269-52737288 | Msa1024180:CDS | 45.0% | |
| ! | ACCTCTGTTGTTGTATTGGC+TGG | - | chr7_1:52737296-52737315 | Msa1024180:CDS | 45.0% |
| !! | CCTCTGTTGTTGTATTGGCT+GGG | - | chr7_1:52737297-52737316 | Msa1024180:CDS | 45.0% |
| !! | CTCTGTTGTTGTATTGGCTG+GGG | - | chr7_1:52737298-52737317 | Msa1024180:CDS | 45.0% |
| !! | TATTGGCTGGGGAGCTTTTA+AGG | - | chr7_1:52737309-52737328 | Msa1024180:CDS | 45.0% |
| ! | ATTGGCTGGGGAGCTTTTAA+GGG | - | chr7_1:52737310-52737329 | Msa1024180:CDS | 45.0% |
| TGAGTGTGCTCGTAATGCAT+TGG | - | chr7_1:52738009-52738028 | Msa1024180:intron | 45.0% | |
| ! | TGCATTGGTAGAGAAGGTTG+TGG | - | chr7_1:52738024-52738043 | Msa1024180:intron | 45.0% |
| GTGGACAACAAAGAAGATGC+TGG | - | chr7_1:52738043-52738062 | Msa1024180:intron | 45.0% | |
| TTCAAAGGCTACAGAGCCAA+TGG | + | chr7_1:52738100-52738119 | None:intergenic | 45.0% | |
| ! | ATGATAGCTAGTTTGGGCCT+TGG | - | chr7_1:52738660-52738679 | Msa1024180:intron | 45.0% |
| TGAGTCTATCAGTGATCCTC+CGG | + | chr7_1:52739008-52739027 | None:intergenic | 45.0% | |
| TGAGATTGAAGGAGCTGAGA+AGG | - | chr7_1:52739421-52739440 | Msa1024180:intron | 45.0% | |
| AACAGACTCAGGGTTGTCAA+AGG | + | chr7_1:52739630-52739649 | None:intergenic | 45.0% | |
| AACCCTGAGTCTGTTAAGCT+TGG | - | chr7_1:52739635-52739654 | Msa1024180:intron | 45.0% | |
| ACCCTGAGTCTGTTAAGCTT+GGG | - | chr7_1:52739636-52739655 | Msa1024180:intron | 45.0% | |
| !! | GCATGCACAATAGTTCTGAG+AGG | - | chr7_1:52739734-52739753 | Msa1024180:intron | 45.0% |
| !! | CAATAGTTCTGAGAGGTGCT+AGG | - | chr7_1:52739741-52739760 | Msa1024180:intron | 45.0% |
| GTAAGGAGCAGGGCAATAAA+AGG | + | chr7_1:52740175-52740194 | None:intergenic | 45.0% | |
| CTGCCACAAAAACAGATGTC+AGG | + | chr7_1:52740295-52740314 | None:intergenic | 45.0% | |
| CTCAGACTGTCAATGATAGC+AGG | - | chr7_1:52740371-52740390 | Msa1024180:intron | 45.0% | |
| !! | GCCTGAAATGGTAATGGCAA+AGG | - | chr7_1:52740414-52740433 | Msa1024180:intron | 45.0% |
| !! | GCATTGGCTAGAAAAACTCC+AGG | - | chr7_1:52740445-52740464 | Msa1024180:intron | 45.0% |
| !!! | TTGCAATGGAGGCATTTTCC+CGG | - | chr7_1:52740479-52740498 | Msa1024180:CDS | 45.0% |
| GCTGGAATTGATGTCATCTC+TGG | - | chr7_1:52740604-52740623 | Msa1024180:CDS | 45.0% | |
| TCTGATCACTGCATTCACTC+TGG | - | chr7_1:52740699-52740718 | Msa1024180:intron | 45.0% | |
| ! | TTACTCCCTAGTGGATACAG+TGG | - | chr7_1:52740810-52740829 | Msa1024180:CDS | 45.0% |
| CTAACTCCACTGTATCCACT+AGG | + | chr7_1:52740819-52740838 | None:intergenic | 45.0% | |
| ! | CTAGTGGATACAGTGGAGTT+AGG | - | chr7_1:52740817-52740836 | Msa1024180:CDS | 45.0% |
| GATGTGTACTTCTCGTAGGT+TGG | - | chr7_1:52741080-52741099 | Msa1024180:intron | 45.0% | |
| GGTTGGAGACATGTTTCAAC+GGG | - | chr7_1:52741097-52741116 | Msa1024180:intron | 45.0% | |
| GTTGGAGACATGTTTCAACG+GGG | - | chr7_1:52741098-52741117 | Msa1024180:intron | 45.0% | |
| ATTGCTATCTGCAACAGAGG+CGG | - | chr7_1:52741154-52741173 | Msa1024180:intron | 45.0% | |
| ! | TCATAACTTGTGCTCCAAGG+AGG | - | chr7_1:52741204-52741223 | Msa1024180:CDS | 45.0% |
| ATTCTGTCTTCTCTCCTCCT+TGG | + | chr7_1:52741221-52741240 | None:intergenic | 45.0% | |
| TGTCAGAATTTGCCAAGGCA+TGG | + | chr7_1:52741284-52741303 | None:intergenic | 45.0% | |
| AGAAGAAAAAGCTAGCACCC+AGG | + | chr7_1:52741452-52741471 | None:intergenic | 45.0% | |
| TCTAGCTGCCAACTGGAATT+TGG | - | chr7_1:52741518-52741537 | Msa1024180:intron | 45.0% | |
| !! | AACATGTGCCTTTAGGACAC+AGG | + | chr7_1:52741692-52741711 | None:intergenic | 45.0% |
| !!! | ATTAAAGTTTTTTTTTTTTA+AGG | + | chr7_1:52740008-52740027 | None:intergenic | 5.0% |
| ! | TAGAAAGCGCGAGAGAGAGT+TGG | + | chr7_1:52736234-52736253 | None:intergenic | 50.0% |
| GTCATCATTTGTCGGGGCTA+TGG | - | chr7_1:52736978-52736997 | Msa1024180:intron | 50.0% | |
| TACCTTAGGCCCAAAGGGAA+TGG | - | chr7_1:52737023-52737042 | Msa1024180:intron | 50.0% | |
| TACCATTCCCTTTGGGCCTA+AGG | + | chr7_1:52737028-52737047 | None:intergenic | 50.0% | |
| ATTCTGCAGTCAACGGGTAG+AGG | - | chr7_1:52737149-52737168 | Msa1024180:intron | 50.0% | |
| TTCTGCAGTCAACGGGTAGA+GGG | - | chr7_1:52737150-52737169 | Msa1024180:intron | 50.0% | |
| CCCAGCCAATACAACAACAG+AGG | + | chr7_1:52737300-52737319 | None:intergenic | 50.0% | |
| AACTGCAGTATGGACGGAGT+GGG | + | chr7_1:52737881-52737900 | None:intergenic | 50.0% | |
| AAACTGCAGTATGGACGGAG+TGG | + | chr7_1:52737882-52737901 | None:intergenic | 50.0% | |
| GAGTCTATCAGTGATCCTCC+GGG | + | chr7_1:52739007-52739026 | None:intergenic | 50.0% | |
| CACTGCAATGGACACAGACA+AGG | - | chr7_1:52739349-52739368 | Msa1024180:intron | 50.0% | |
| CATAGAGTCGACACGAACAC+GGG | + | chr7_1:52739390-52739409 | None:intergenic | 50.0% | |
| CCATAGAGTCGACACGAACA+CGG | + | chr7_1:52739391-52739410 | None:intergenic | 50.0% | |
| CATCAGCAAAGAGCTCCTCT+GGG | + | chr7_1:52739526-52739545 | None:intergenic | 50.0% | |
| GCCCAAGCTTAACAGACTCA+GGG | + | chr7_1:52739640-52739659 | None:intergenic | 50.0% | |
| TGCCCAAGCTTAACAGACTC+AGG | + | chr7_1:52739641-52739660 | None:intergenic | 50.0% | |
| TCTCAGCCTCATCAAGGACA+TGG | + | chr7_1:52740321-52740340 | None:intergenic | 50.0% | |
| ATGTCCTTGATGAGGCTGAG+AGG | - | chr7_1:52740320-52740339 | Msa1024180:intron | 50.0% | |
| ATGACCTCTCAGCCTCATCA+AGG | + | chr7_1:52740327-52740346 | None:intergenic | 50.0% | |
| !! | GATAGCAGGGTGTTACTTGG+AGG | - | chr7_1:52740385-52740404 | Msa1024180:intron | 50.0% |
| !!! | TGCAATGGAGGCATTTTCCC+GGG | - | chr7_1:52740480-52740499 | Msa1024180:CDS | 50.0% |
| ! | AAGGAAGCATGCTGAGCTAG+CGG | + | chr7_1:52741028-52741047 | None:intergenic | 50.0% |
| GACCGATGTGTACTTCTCGT+AGG | - | chr7_1:52741076-52741095 | Msa1024180:intron | 50.0% | |
| GGTGGCAAGCATCTGAAAGT+TGG | + | chr7_1:52741263-52741282 | None:intergenic | 50.0% | |
| CAGAATTTGCCAAGGCATGG+TGG | + | chr7_1:52741281-52741300 | None:intergenic | 50.0% | |
| AGCTAGCACCCAGGTGAAAA+AGG | + | chr7_1:52741443-52741462 | None:intergenic | 50.0% | |
| GTATGAGTCTAGCTGCCAAC+TGG | - | chr7_1:52741511-52741530 | Msa1024180:intron | 50.0% | |
| !! | CCGTGTTCGTGTCGACTCTA+TGG | - | chr7_1:52739388-52739407 | Msa1024180:intron | 55.0% |
| GCATCAGCAAAGAGCTCCTC+TGG | + | chr7_1:52739527-52739546 | None:intergenic | 55.0% | |
| GAGGAGCTCTTTGCTGATGC+AGG | - | chr7_1:52739527-52739546 | Msa1024180:CDS | 55.0% | |
| ! | TGGTATTGAGCGTCTGGCTC+TGG | - | chr7_1:52739580-52739599 | Msa1024180:CDS | 55.0% |
| !! | TTCTGGTGTTGCAATGGGGC+AGG | - | chr7_1:52739712-52739731 | Msa1024180:intron | 55.0% |
| CAGCCACCATGTCCTTGATG+AGG | - | chr7_1:52740312-52740331 | Msa1024180:intron | 55.0% | |
| CAGCCTCATCAAGGACATGG+TGG | + | chr7_1:52740318-52740337 | None:intergenic | 55.0% | |
| !! | AGCAGGGTGTTACTTGGAGG+CGG | - | chr7_1:52740388-52740407 | Msa1024180:intron | 55.0% |
| CGGGTGGCCTGAAATGGTAA+TGG | - | chr7_1:52740408-52740427 | Msa1024180:intron | 55.0% | |
| !! | TTGGGATAGCCAAGAGTGCC+CGG | + | chr7_1:52740501-52740520 | None:intergenic | 55.0% |
| CAGCAGTACATCCCTCGTTC+TGG | + | chr7_1:52740588-52740607 | None:intergenic | 55.0% | |
| CAGAACGAGGGATGTACTGC+TGG | - | chr7_1:52740586-52740605 | Msa1024180:CDS | 55.0% | |
| AGATGCTTGCCACCATGCCT+TGG | - | chr7_1:52741269-52741288 | Msa1024180:intron | 55.0% | |
| ! | CGAGAGAGAGTTGGCTGGCT+AGG | + | chr7_1:52736225-52736244 | None:intergenic | 60.0% |
| AAGCGCGAGAGAGAGTTGGC+TGG | + | chr7_1:52736230-52736249 | None:intergenic | 60.0% | |
| GAAAGGAGAGCGGGCGAGAA+TGG | - | chr7_1:52736644-52736663 | Msa1024180:CDS | 60.0% | |
| !! | GGCTGGGGAGCTTTTAAGGG+AGG | - | chr7_1:52737313-52737332 | Msa1024180:CDS | 60.0% |
| GAGCACACTCAGCCGCCATT+CGG | + | chr7_1:52738000-52738019 | None:intergenic | 60.0% | |
| !! | GAGCGTCTGGCTCTGGTAAC+TGG | - | chr7_1:52739587-52739606 | Msa1024180:CDS | 60.0% |
| !! | CGTCTGGCTCTGGTAACTGG+TGG | - | chr7_1:52739590-52739609 | Msa1024180:CDS | 60.0% |
| !! | GCAGGGTGTTACTTGGAGGC+GGG | - | chr7_1:52740389-52740408 | Msa1024180:intron | 60.0% |
| ! | GGCATTTTCCCGGGCACTCT+TGG | - | chr7_1:52740489-52740508 | Msa1024180:CDS | 60.0% |
| !! | TGGGATAGCCAAGAGTGCCC+GGG | + | chr7_1:52740500-52740519 | None:intergenic | 60.0% |
| CCTCGTTCTGGTGCTCAGCA+CGG | + | chr7_1:52740576-52740595 | None:intergenic | 60.0% | |
| CGTGCTGAGCACCAGAACGA+GGG | - | chr7_1:52740574-52740593 | Msa1024180:CDS | 60.0% | |
| !! | GGGTGTTACTTGGAGGCGGG+TGG | - | chr7_1:52740392-52740411 | Msa1024180:intron | 65.0% |
| TGGAGGCGGGTGGCCTGAAA+TGG | - | chr7_1:52740402-52740421 | Msa1024180:intron | 65.0% | |
| CCGTGCTGAGCACCAGAACG+AGG | - | chr7_1:52740573-52740592 | Msa1024180:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 52736142 | 52741711 | 52736142 | ID=Msa1024180;Name=Msa1024180 |
| chr7_1 | mRNA | 52736142 | 52741711 | 52736142 | ID=Msa1024180-mRNA-1;Parent=Msa1024180;Name=Msa1024180-mRNA-1;_AED=0.33;_eAED=0.33;_QI=170|1|1|1|0.75|0.61|13|412|527 |
| chr7_1 | exon | 52736142 | 52736374 | 52736142 | ID=Msa1024180-mRNA-1:exon:10522;Parent=Msa1024180-mRNA-1 |
| chr7_1 | exon | 52736404 | 52736575 | 52736404 | ID=Msa1024180-mRNA-1:exon:10521;Parent=Msa1024180-mRNA-1 |
| chr7_1 | exon | 52736602 | 52736755 | 52736602 | ID=Msa1024180-mRNA-1:exon:10520;Parent=Msa1024180-mRNA-1 |
| chr7_1 | exon | 52737223 | 52737538 | 52737223 | ID=Msa1024180-mRNA-1:exon:10519;Parent=Msa1024180-mRNA-1 |
| chr7_1 | exon | 52738091 | 52738576 | 52738091 | ID=Msa1024180-mRNA-1:exon:10518;Parent=Msa1024180-mRNA-1 |
| chr7_1 | exon | 52738812 | 52738888 | 52738812 | ID=Msa1024180-mRNA-1:exon:10517;Parent=Msa1024180-mRNA-1 |
| chr7_1 | exon | 52739516 | 52739631 | 52739516 | ID=Msa1024180-mRNA-1:exon:10516;Parent=Msa1024180-mRNA-1 |
| chr7_1 | exon | 52739789 | 52739860 | 52739789 | ID=Msa1024180-mRNA-1:exon:10515;Parent=Msa1024180-mRNA-1 |
| chr7_1 | exon | 52740470 | 52740710 | 52740470 | ID=Msa1024180-mRNA-1:exon:10514;Parent=Msa1024180-mRNA-1 |
| chr7_1 | exon | 52740809 | 52740874 | 52740809 | ID=Msa1024180-mRNA-1:exon:10513;Parent=Msa1024180-mRNA-1 |
| chr7_1 | exon | 52741188 | 52741244 | 52741188 | ID=Msa1024180-mRNA-1:exon:10512;Parent=Msa1024180-mRNA-1 |
| chr7_1 | exon | 52741343 | 52741379 | 52741343 | ID=Msa1024180-mRNA-1:exon:10511;Parent=Msa1024180-mRNA-1 |
| chr7_1 | exon | 52741573 | 52741711 | 52741573 | ID=Msa1024180-mRNA-1:exon:10510;Parent=Msa1024180-mRNA-1 |
| chr7_1 | five_prime_UTR | 52741573 | 52741711 | 52741573 | ID=Msa1024180-mRNA-1:five_prime_utr;Parent=Msa1024180-mRNA-1 |
| chr7_1 | five_prime_UTR | 52741349 | 52741379 | 52741349 | ID=Msa1024180-mRNA-1:five_prime_utr;Parent=Msa1024180-mRNA-1 |
| chr7_1 | CDS | 52741343 | 52741348 | 52741343 | ID=Msa1024180-mRNA-1:cds;Parent=Msa1024180-mRNA-1 |
| chr7_1 | CDS | 52741188 | 52741244 | 52741188 | ID=Msa1024180-mRNA-1:cds;Parent=Msa1024180-mRNA-1 |
| chr7_1 | CDS | 52740809 | 52740874 | 52740809 | ID=Msa1024180-mRNA-1:cds;Parent=Msa1024180-mRNA-1 |
| chr7_1 | CDS | 52740470 | 52740710 | 52740470 | ID=Msa1024180-mRNA-1:cds;Parent=Msa1024180-mRNA-1 |
| chr7_1 | CDS | 52739789 | 52739860 | 52739789 | ID=Msa1024180-mRNA-1:cds;Parent=Msa1024180-mRNA-1 |
| chr7_1 | CDS | 52739516 | 52739631 | 52739516 | ID=Msa1024180-mRNA-1:cds;Parent=Msa1024180-mRNA-1 |
| chr7_1 | CDS | 52738812 | 52738888 | 52738812 | ID=Msa1024180-mRNA-1:cds;Parent=Msa1024180-mRNA-1 |
| chr7_1 | CDS | 52738091 | 52738576 | 52738091 | ID=Msa1024180-mRNA-1:cds;Parent=Msa1024180-mRNA-1 |
| chr7_1 | CDS | 52737223 | 52737538 | 52737223 | ID=Msa1024180-mRNA-1:cds;Parent=Msa1024180-mRNA-1 |
| chr7_1 | CDS | 52736609 | 52736755 | 52736609 | ID=Msa1024180-mRNA-1:cds;Parent=Msa1024180-mRNA-1 |
| chr7_1 | three_prime_UTR | 52736602 | 52736608 | 52736602 | ID=Msa1024180-mRNA-1:three_prime_utr;Parent=Msa1024180-mRNA-1 |
| chr7_1 | three_prime_UTR | 52736404 | 52736575 | 52736404 | ID=Msa1024180-mRNA-1:three_prime_utr;Parent=Msa1024180-mRNA-1 |
| chr7_1 | three_prime_UTR | 52736142 | 52736374 | 52736142 | ID=Msa1024180-mRNA-1:three_prime_utr;Parent=Msa1024180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
