Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1264470 | XP_003610300.1 | 96.552 | 377 | 7 | 2 | 1 | 375 | 1 | 373 | 0.0 | 744 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1264470 | sp|Q8GSJ1|HIS1B_ARATH | 81.894 | 359 | 64 | 1 | 18 | 375 | 55 | 413 | 0.0 | 612 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1264470 | Msa1397470 | 0.819131 | 1.364562e-52 | -8.615850e-47 |
Msa1131440 | Msa1264470 | 0.923562 | 2.253989e-89 | -8.615850e-47 |
Msa0482990 | Msa1264470 | 0.921213 | 4.770004e-88 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1264470 | MtrunA17_Chr4g0073831 | 96.552 | 377 | 7 | 2 | 1 | 375 | 1 | 373 | 0.0 | 744 |
Msa1264470 | MtrunA17_Chr2g0277331 | 77.913 | 412 | 35 | 6 | 3 | 375 | 5 | 399 | 0.0 | 614 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1264470 | AT1G09795.1 | 81.894 | 359 | 64 | 1 | 18 | 375 | 55 | 413 | 0.0 | 612 |
Msa1264470 | AT1G58080.1 | 82.789 | 337 | 58 | 0 | 39 | 375 | 75 | 411 | 0.0 | 592 |
Find 113 sgRNAs with CRISPR-Local
Find 374 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATACATGTGTTCCATTTA+TGG | 0.073539 | 8_2:+67995728 | Msa1264470:three_prime_UTR |
TCTCTTGATACTAGATAATT+TGG | 0.099377 | 8_2:+67995945 | Msa1264470:three_prime_UTR |
ATTAATTAACCTGAGGAATT+TGG | 0.106128 | 8_2:-67991127 | None:intergenic |
CCATTATCTTTCATAAATTT+AGG | 0.185647 | 8_2:-67993214 | None:intergenic |
TAACAATGTCTTTGGGTCTT+TGG | 0.196414 | 8_2:-67991261 | None:intergenic |
TCTGCATTGATAACATCTTT+AGG | 0.240128 | 8_2:-67995795 | None:intergenic |
CTCGATATACTCACTGAATT+TGG | 0.245090 | 8_2:+67991325 | Msa1264470:CDS |
CTGCATTGATAACATCTTTA+GGG | 0.247183 | 8_2:-67995794 | None:intergenic |
AATTGAAGGTGGAACTGTTT+TGG | 0.258121 | 8_2:+67994423 | Msa1264470:CDS |
AGAAGACATACGACCTTTAC+TGG | 0.266634 | 8_2:-67991036 | None:intergenic |
AATAGAGAGGTAAACGAATT+TGG | 0.271491 | 8_2:-67990914 | None:intergenic |
GGCCAGCTCATTGGTGTAGA+TGG | 0.285616 | 8_2:-67996060 | None:intergenic |
TTGTTTCAGATTCCGCAATA+TGG | 0.287466 | 8_2:+67992981 | Msa1264470:intron |
CGTCAGCTCCTTTCTAAACT+TGG | 0.295403 | 8_2:+67995698 | Msa1264470:CDS |
TTAATTAACCTGAGGAATTT+GGG | 0.303133 | 8_2:-67991126 | None:intergenic |
CCTAAATTTATGAAAGATAA+TGG | 0.327102 | 8_2:+67993214 | Msa1264470:CDS |
ATTGTTAGAAAATTGTTATC+TGG | 0.350355 | 8_2:+67991277 | Msa1264470:CDS |
AGACTTGTACAGTGCCTTCT+TGG | 0.359607 | 8_2:-67995154 | None:intergenic |
TATCGTTGTCCACGAGGCTT+TGG | 0.367464 | 8_2:+67992838 | Msa1264470:CDS |
CTCTTGATACTAGATAATTT+GGG | 0.374851 | 8_2:+67995946 | Msa1264470:three_prime_UTR |
AGATTTCAAACTTGGAAGTC+TGG | 0.377840 | 8_2:+67991236 | Msa1264470:intron |
TTATCTGGAGATCTTGATCT+TGG | 0.378632 | 8_2:+67991292 | Msa1264470:CDS |
CCATCGCGCTTGCAGAAAAC+AGG | 0.381923 | 8_2:-67995090 | None:intergenic |
CTTGGGCACACATATGACTA+TGG | 0.388474 | 8_2:-67995136 | None:intergenic |
AAGCCTCTGCGAGTTGCAAC+TGG | 0.392840 | 8_2:+67993065 | Msa1264470:CDS |
TGAGATGCTTGAAAGATTAG+AGG | 0.394252 | 8_2:+67994672 | Msa1264470:CDS |
TACACTGCAGATTTCAAACT+TGG | 0.415322 | 8_2:+67991228 | Msa1264470:intron |
ACCATCGTTAGCTGGGTTGC+AGG | 0.420563 | 8_2:+67994869 | Msa1264470:CDS |
GGGGATTGCTGATGCTATCT+TGG | 0.420913 | 8_2:+67994354 | Msa1264470:CDS |
AATTGAAGAAAAGAAACTAT+AGG | 0.421124 | 8_2:-67995917 | None:intergenic |
CTGAGCCAACCATCGTTAGC+TGG | 0.423235 | 8_2:+67994861 | Msa1264470:CDS |
ATCAAACTTCATTTGAAAGA+TGG | 0.432851 | 8_2:-67996081 | None:intergenic |
TTGTTGTGGGTGTTAAAGTA+TGG | 0.437477 | 8_2:+67995998 | Msa1264470:three_prime_UTR |
TTGAAAGATGGCCAGCTCAT+TGG | 0.443291 | 8_2:-67996069 | None:intergenic |
GACTTGTACAGTGCCTTCTT+GGG | 0.445015 | 8_2:-67995153 | None:intergenic |
GTCAGCTCCTTTCTAAACTT+GGG | 0.445359 | 8_2:+67995699 | Msa1264470:CDS |
GTTGAAAGAAAATAACTTGA+AGG | 0.459040 | 8_2:+67994399 | Msa1264470:CDS |
GAGGGCTATGGGGCAGTTCA+CGG | 0.460141 | 8_2:+67994702 | Msa1264470:CDS |
AGAGGCACATCTGAGGGCTA+TGG | 0.460886 | 8_2:+67994690 | Msa1264470:CDS |
TTCGACTGCTGACGGAGCAC+TGG | 0.466865 | 8_2:+67993255 | Msa1264470:CDS |
GTCCACGAGGCTTTGGAGTA+CGG | 0.469178 | 8_2:+67992845 | Msa1264470:CDS |
GATCTCTTGTCTTCTGCTGC+CGG | 0.470766 | 8_2:-67991000 | None:intergenic |
AGGAAGTAGTGCAGAGGAAG+TGG | 0.471067 | 8_2:+67994827 | Msa1264470:CDS |
TTGACGAGGAAACTCCTAGA+TGG | 0.477208 | 8_2:+67995675 | Msa1264470:CDS |
AGGCTGCTCTTGTTGCAAGC+AGG | 0.487061 | 8_2:+67994608 | Msa1264470:intron |
TTTAACTTCAACAATTGTTG+TGG | 0.491046 | 8_2:+67995984 | Msa1264470:three_prime_UTR |
ACGTTGTTCCACTACTTACA+AGG | 0.492916 | 8_2:-67994378 | None:intergenic |
TTGTCAATTGTCAGTCAAGC+AGG | 0.495907 | 8_2:+67991082 | Msa1264470:CDS |
TTAACTTCAACAATTGTTGT+GGG | 0.503691 | 8_2:+67995985 | Msa1264470:three_prime_UTR |
GAGGCACATCTGAGGGCTAT+GGG | 0.505249 | 8_2:+67994691 | Msa1264470:CDS |
AAATCATTGATCGGACGAAA+AGG | 0.506065 | 8_2:+67994631 | Msa1264470:CDS |
GAAAGGAGCTGACGCCATCT+AGG | 0.514685 | 8_2:-67995689 | None:intergenic |
AGGAGGAACGACGCTGATGA+TGG | 0.517427 | 8_2:-67990847 | None:intergenic |
ATGAGTCTCGGAGGAGATTG+AGG | 0.524502 | 8_2:-67990946 | None:intergenic |
CAGAAGACAAGAGATCCGTC+TGG | 0.525828 | 8_2:+67991007 | Msa1264470:CDS |
GTATGTTGCCCAAATTCCTC+AGG | 0.527688 | 8_2:+67991118 | Msa1264470:CDS |
ATACTAGATAATTTGGGATG+CGG | 0.531826 | 8_2:+67995952 | Msa1264470:three_prime_UTR |
ACTAAAGCCCAAGTTTAGAA+AGG | 0.532749 | 8_2:-67995706 | None:intergenic |
TGATAACATCTTTAGGGAGA+GGG | 0.534427 | 8_2:-67995788 | None:intergenic |
GCCAGCTCATTGGTGTAGAT+GGG | 0.545089 | 8_2:-67996059 | None:intergenic |
AATAACTTGAAGGAAATTGA+AGG | 0.546732 | 8_2:+67994409 | Msa1264470:CDS |
TTGATAACATCTTTAGGGAG+AGG | 0.551055 | 8_2:-67995789 | None:intergenic |
TGATACACTCGACCTTCTCA+AGG | 0.552104 | 8_2:+67991058 | Msa1264470:CDS |
GGCTTATCTTCTGTCCATTG+AGG | 0.552577 | 8_2:-67993047 | None:intergenic |
ATCTTGGACCTTGTAAGTAG+TGG | 0.552901 | 8_2:+67994370 | Msa1264470:CDS |
GATCTTGATCTTGGTATCGT+CGG | 0.554851 | 8_2:+67991301 | Msa1264470:CDS |
TGAGCCAACCATCGTTAGCT+GGG | 0.555529 | 8_2:+67994862 | Msa1264470:CDS |
GACTGCTGACGGAGCACTGG+AGG | 0.563946 | 8_2:+67993258 | Msa1264470:CDS |
CATACAAACTGATGCAGAGG+TGG | 0.567776 | 8_2:-67995875 | None:intergenic |
TTAGTGTTCGATTGAGACAC+GGG | 0.569033 | 8_2:-67990805 | None:intergenic |
AGTCATATGTGTGCCCAAGA+AGG | 0.572168 | 8_2:+67995140 | Msa1264470:CDS |
TATACTCACTGAATTTGGCC+AGG | 0.572345 | 8_2:+67991330 | Msa1264470:CDS |
AATGACAACACAATCTCCTC+CGG | 0.573673 | 8_2:+67990981 | Msa1264470:CDS |
AGCACTGGAGGCAGCTCCTG+CGG | 0.577767 | 8_2:+67993270 | Msa1264470:CDS |
ATTCATGTGATGCAGATTGG+AGG | 0.578035 | 8_2:+67995617 | Msa1264470:intron |
GCAACCCAGCTAACGATGGT+TGG | 0.580333 | 8_2:-67994866 | None:intergenic |
CGTCTGGGTTTACCCAGTAA+AGG | 0.581574 | 8_2:+67991023 | Msa1264470:CDS |
ACCCATCTACACCAATGAGC+TGG | 0.584141 | 8_2:+67996058 | Msa1264470:three_prime_UTR |
TGAAAATGTAAATTCACTAG+AGG | 0.584392 | 8_2:+67993010 | Msa1264470:CDS |
TTTCTGCAAGCGCGATGGAA+AGG | 0.585463 | 8_2:+67995095 | Msa1264470:CDS |
CTCTTGTCTTCTGCTGCCGG+AGG | 0.586047 | 8_2:-67990997 | None:intergenic |
AAGATTAGAGGCACATCTGA+GGG | 0.596395 | 8_2:+67994684 | Msa1264470:CDS |
GTGATGCAGATTGGAGGCAG+CGG | 0.598542 | 8_2:+67995623 | Msa1264470:intron |
GTAATTTCAACTCACCGCAA+TGG | 0.599912 | 8_2:-67992882 | None:intergenic |
GTCTATACAGCAACTGAGAG+CGG | 0.600820 | 8_2:+67995173 | Msa1264470:CDS |
AAGAACTTGATGATGAGTCT+CGG | 0.602026 | 8_2:-67990958 | None:intergenic |
GATAACATCTTTAGGGAGAG+GGG | 0.611885 | 8_2:-67995787 | None:intergenic |
GCAAGCAGGAAATCATTGAT+CGG | 0.612487 | 8_2:+67994622 | Msa1264470:CDS |
AAAGATTAGAGGCACATCTG+AGG | 0.618033 | 8_2:+67994683 | Msa1264470:CDS |
GAAGACATACGACCTTTACT+GGG | 0.626259 | 8_2:-67991035 | None:intergenic |
AGAAGACAAGAGATCCGTCT+GGG | 0.626407 | 8_2:+67991008 | Msa1264470:CDS |
ACAATTGACAATCCTTGAGA+AGG | 0.631059 | 8_2:-67991070 | None:intergenic |
ATTAGTGTTCGATTGAGACA+CGG | 0.632165 | 8_2:-67990806 | None:intergenic |
TGATTGTCGTTTATCCATTG+CGG | 0.633490 | 8_2:+67992868 | Msa1264470:CDS |
AGATAATGGTATTAAGCATG+TGG | 0.634797 | 8_2:+67993228 | Msa1264470:CDS |
CAACATACAAACTGATGCAG+AGG | 0.635116 | 8_2:-67995878 | None:intergenic |
GAGGCGTAGCAGCAATAGAG+AGG | 0.638994 | 8_2:-67990927 | None:intergenic |
CAGAAAACAGGACTTACTGT+GGG | 0.647329 | 8_2:-67995078 | None:intergenic |
CAGGTTGTAGCAAACATGAG+AGG | 0.648123 | 8_2:+67994807 | Msa1264470:intron |
AACTTGAAGGAAATTGAAGG+TGG | 0.649831 | 8_2:+67994412 | Msa1264470:CDS |
GCAGAAAACAGGACTTACTG+TGG | 0.653659 | 8_2:-67995079 | None:intergenic |
AATCCAGTTGCAACTCGCAG+AGG | 0.653851 | 8_2:-67993068 | None:intergenic |
CATGAGAGGAAGTAGTGCAG+AGG | 0.654817 | 8_2:+67994821 | Msa1264470:CDS |
ATACAAACTGATGCAGAGGT+GGG | 0.659693 | 8_2:-67995874 | None:intergenic |
AGGCACATCTGAGGGCTATG+GGG | 0.661787 | 8_2:+67994692 | Msa1264470:CDS |
AGATCTTATCGTTGTCCACG+AGG | 0.663229 | 8_2:+67992832 | Msa1264470:CDS |
ACCTGCAACCCAGCTAACGA+TGG | 0.667474 | 8_2:-67994870 | None:intergenic |
CACCGTACTCCAAAGCCTCG+TGG | 0.672065 | 8_2:-67992847 | None:intergenic |
CTTTACTGGGTAAACCCAGA+CGG | 0.678884 | 8_2:-67991022 | None:intergenic |
ATTTGGGCAACATACTGACG+TGG | 0.682664 | 8_2:-67991110 | None:intergenic |
GATGGCGAAGCTAAAGTCTG+TGG | 0.688485 | 8_2:-67990829 | None:intergenic |
CATTTGCTGCTCGATAACAG+AGG | 0.690228 | 8_2:+67995846 | Msa1264470:three_prime_UTR |
AACTTGATGATGAGTCTCGG+AGG | 0.694599 | 8_2:-67990955 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTTCTTTATTATCTTTTCT+CGG | + | chr8_2:67991365-67991384 | Msa1264470:intron | 15.0% |
!!! | TTTTATATGTTTCAATGTAT+GGG | + | chr8_2:67991405-67991424 | Msa1264470:intron | 15.0% |
!! | AAAAAACAATCACATTAATT+GGG | - | chr8_2:67991493-67991512 | None:intergenic | 15.0% |
!!! | ATAAATTCTAAGAAAATAGA+AGG | - | chr8_2:67991726-67991745 | None:intergenic | 15.0% |
!!! | TGTTTGAATTTTAAATTTAG+CGG | - | chr8_2:67992347-67992366 | None:intergenic | 15.0% |
!! | ATGTTAATTGAACTAAATAT+AGG | - | chr8_2:67992377-67992396 | None:intergenic | 15.0% |
!! | TTAAATCAAATGATAGTTAT+TGG | + | chr8_2:67993388-67993407 | Msa1264470:intron | 15.0% |
!! | TAAATCAAATGATAGTTATT+GGG | + | chr8_2:67993389-67993408 | Msa1264470:intron | 15.0% |
!! | ATATTATCTTCAAATTTCAT+AGG | + | chr8_2:67993552-67993571 | Msa1264470:intron | 15.0% |
!! | GATAAAAAATATTGAGAAAA+AGG | - | chr8_2:67994200-67994219 | None:intergenic | 15.0% |
!! | TTATTATTACAATGAAGAGA+AGG | - | chr8_2:67991171-67991190 | None:intergenic | 20.0% |
!!! | AATTTTCTAACAATGTCTTT+GGG | - | chr8_2:67991271-67991290 | None:intergenic | 20.0% |
!! | ATTGTTAGAAAATTGTTATC+TGG | + | chr8_2:67991277-67991296 | Msa1264470:CDS | 20.0% |
!!! | CTTTTATATGTTTCAATGTA+TGG | + | chr8_2:67991404-67991423 | Msa1264470:intron | 20.0% |
!! | GAAAAAACAATCACATTAAT+TGG | - | chr8_2:67991494-67991513 | None:intergenic | 20.0% |
!!! | ATTAATGTGATTGTTTTTTC+CGG | + | chr8_2:67991494-67991513 | Msa1264470:intron | 20.0% |
!! | AATTCCAAAACCAAAATTTA+TGG | - | chr8_2:67991919-67991938 | None:intergenic | 20.0% |
!!! | AATCGTTTTCTATAGAAAAA+AGG | + | chr8_2:67992213-67992232 | Msa1264470:intron | 20.0% |
!!! | GTTTGAATTTTAAATTTAGC+GGG | - | chr8_2:67992346-67992365 | None:intergenic | 20.0% |
!!! | GATAAAAATATTGATTCTCA+TGG | - | chr8_2:67992781-67992800 | None:intergenic | 20.0% |
!! | TATAACAATTATCCTTTATC+AGG | + | chr8_2:67992802-67992821 | Msa1264470:intron | 20.0% |
!! | ATAACAATTATCCTTTATCA+GGG | + | chr8_2:67992803-67992822 | Msa1264470:intron | 20.0% |
!!! | TTTTCAAATATTCCATATTG+CGG | - | chr8_2:67992996-67993015 | None:intergenic | 20.0% |
!! | CCATTATCTTTCATAAATTT+AGG | - | chr8_2:67993217-67993236 | None:intergenic | 20.0% |
!! | CCTAAATTTATGAAAGATAA+TGG | + | chr8_2:67993214-67993233 | Msa1264470:CDS | 20.0% |
!! | AGTCAAGAATTATAAATTGT+AGG | + | chr8_2:67993664-67993683 | Msa1264470:intron | 20.0% |
!! | TGAAAGATATAATAAGCTTT+AGG | + | chr8_2:67993723-67993742 | Msa1264470:intron | 20.0% |
!! | CCAGAAATTTATAATTAGAT+CGG | - | chr8_2:67993880-67993899 | None:intergenic | 20.0% |
!!! | TTTTGCTTATCATATTCATA+TGG | + | chr8_2:67995434-67995453 | Msa1264470:intron | 20.0% |
!! | ACTGTAAAAAAAACCATAAA+TGG | - | chr8_2:67995744-67995763 | None:intergenic | 20.0% |
!!! | ATGGTTTTTTTTACAGTATA+TGG | + | chr8_2:67995747-67995766 | Msa1264470:intron | 20.0% |
!! | AATTGAAGAAAAGAAACTAT+AGG | - | chr8_2:67995920-67995939 | None:intergenic | 20.0% |
! | TTAATTAACCTGAGGAATTT+GGG | - | chr8_2:67991129-67991148 | None:intergenic | 25.0% |
! | ATTAATTAACCTGAGGAATT+TGG | - | chr8_2:67991130-67991149 | None:intergenic | 25.0% |
! | GTAAGTAATTAATTAACCTG+AGG | - | chr8_2:67991137-67991156 | None:intergenic | 25.0% |
!! | CAATTTTCTAACAATGTCTT+TGG | - | chr8_2:67991272-67991291 | None:intergenic | 25.0% |
! | GCAAATGATACAAAATTACT+AGG | + | chr8_2:67991540-67991559 | Msa1264470:intron | 25.0% |
! | TGATACAAAATTACTAGGAA+AGG | + | chr8_2:67991545-67991564 | Msa1264470:intron | 25.0% |
! | GATACAAAATTACTAGGAAA+GGG | + | chr8_2:67991546-67991565 | Msa1264470:intron | 25.0% |
! | AAATTCTTTCAAATTTCGGA+GGG | - | chr8_2:67991947-67991966 | None:intergenic | 25.0% |
! | CCACAAATTCTTTCAAATTT+CGG | - | chr8_2:67991951-67991970 | None:intergenic | 25.0% |
! | TGAAAATGTAAATTCACTAG+AGG | + | chr8_2:67993010-67993029 | Msa1264470:CDS | 25.0% |
! | TAAATGTGAATCACATACAT+AGG | - | chr8_2:67993096-67993115 | None:intergenic | 25.0% |
!!! | ATGTTTTGAAGTTTTATCTG+TGG | + | chr8_2:67993120-67993139 | Msa1264470:intron | 25.0% |
!! | TTTAGAATCTGAAAACATAC+AGG | - | chr8_2:67993329-67993348 | None:intergenic | 25.0% |
! | AAATGATAGTTATTGGGATT+TGG | + | chr8_2:67993395-67993414 | Msa1264470:intron | 25.0% |
!!! | CATGGTTATCTTTGATTTTT+GGG | - | chr8_2:67993508-67993527 | None:intergenic | 25.0% |
! | AGCATTGTTTGAGTAAATTA+AGG | + | chr8_2:67993834-67993853 | Msa1264470:intron | 25.0% |
! | CCGATCTAATTATAAATTTC+TGG | + | chr8_2:67993877-67993896 | Msa1264470:intron | 25.0% |
! | AAACAGGGAAATATCTTATA+CGG | - | chr8_2:67994176-67994195 | None:intergenic | 25.0% |
! | TATTGAGAAAAAGGTAAACA+GGG | - | chr8_2:67994191-67994210 | None:intergenic | 25.0% |
! | ATATTGAGAAAAAGGTAAAC+AGG | - | chr8_2:67994192-67994211 | None:intergenic | 25.0% |
!! | TTGTCTTTTCTCTATTTAGA+TGG | + | chr8_2:67994333-67994352 | Msa1264470:intron | 25.0% |
!! | TGTCTTTTCTCTATTTAGAT+GGG | + | chr8_2:67994334-67994353 | Msa1264470:intron | 25.0% |
! | GTTGAAAGAAAATAACTTGA+AGG | + | chr8_2:67994399-67994418 | Msa1264470:CDS | 25.0% |
! | AATAACTTGAAGGAAATTGA+AGG | + | chr8_2:67994409-67994428 | Msa1264470:CDS | 25.0% |
!!! | TGATCTGCTGTTTTTTTAAA+AGG | + | chr8_2:67994490-67994509 | Msa1264470:intron | 25.0% |
!! | CCATTTTCTAATGTTAAATC+CGG | + | chr8_2:67994784-67994803 | Msa1264470:intron | 25.0% |
! | TAGGAAAAAGAAATTAGACA+CGG | + | chr8_2:67995280-67995299 | Msa1264470:intron | 25.0% |
! | TATGATAAGCAAAAATTGAG+AGG | - | chr8_2:67995428-67995447 | None:intergenic | 25.0% |
!!! | ATTCTCATACCTATTTCTTT+TGG | + | chr8_2:67995590-67995609 | Msa1264470:intron | 25.0% |
! | TCTCTTGATACTAGATAATT+TGG | + | chr8_2:67995945-67995964 | Msa1264470:three_prime_UTR | 25.0% |
! | CTCTTGATACTAGATAATTT+GGG | + | chr8_2:67995946-67995965 | Msa1264470:three_prime_UTR | 25.0% |
!! | TTTAACTTCAACAATTGTTG+TGG | + | chr8_2:67995984-67996003 | Msa1264470:three_prime_UTR | 25.0% |
! | TTAACTTCAACAATTGTTGT+GGG | + | chr8_2:67995985-67996004 | Msa1264470:three_prime_UTR | 25.0% |
! | ATCAAACTTCATTTGAAAGA+TGG | - | chr8_2:67996084-67996103 | None:intergenic | 25.0% |
AATAGAGAGGTAAACGAATT+TGG | - | chr8_2:67990917-67990936 | None:intergenic | 30.0% | |
AGAAATTAATTAAGCAGACC+TGG | - | chr8_2:67991351-67991370 | None:intergenic | 30.0% | |
! | ATGTTTCAATGTATGGGTTA+AGG | + | chr8_2:67991411-67991430 | Msa1264470:intron | 30.0% |
! | TGTTTCAATGTATGGGTTAA+GGG | + | chr8_2:67991412-67991431 | Msa1264470:intron | 30.0% |
ACAATCACATTAATTGGGAA+CGG | - | chr8_2:67991488-67991507 | None:intergenic | 30.0% | |
TGCTTCTCTGAATAAATTGA+AGG | - | chr8_2:67991625-67991644 | None:intergenic | 30.0% | |
!! | GAAATGAAGCTATTTCTACT+AGG | - | chr8_2:67991755-67991774 | None:intergenic | 30.0% |
! | TTTTACCTGTGGTTAAATTG+GGG | - | chr8_2:67991778-67991797 | None:intergenic | 30.0% |
! | CTTTTACCTGTGGTTAAATT+GGG | - | chr8_2:67991779-67991798 | None:intergenic | 30.0% |
!!! | TAAAAGCCCTGCATTTTTTT+GGG | + | chr8_2:67991793-67991812 | Msa1264470:intron | 30.0% |
AACATTCCCAAAAAAATGCA+GGG | - | chr8_2:67991802-67991821 | None:intergenic | 30.0% | |
!! | TATATGTGACTTGTTACTGA+CGG | + | chr8_2:67991859-67991878 | Msa1264470:intron | 30.0% |
! | CAACTAGAGTCCATAAATTT+TGG | + | chr8_2:67991906-67991925 | Msa1264470:intron | 30.0% |
!!! | GAGTCCATAAATTTTGGTTT+TGG | + | chr8_2:67991912-67991931 | Msa1264470:intron | 30.0% |
AATTCTTTCAAATTTCGGAG+GGG | - | chr8_2:67991946-67991965 | None:intergenic | 30.0% | |
CAAATTCTTTCAAATTTCGG+AGG | - | chr8_2:67991948-67991967 | None:intergenic | 30.0% | |
CCGAAATTTGAAAGAATTTG+TGG | + | chr8_2:67991948-67991967 | Msa1264470:intron | 30.0% | |
TTCAGATATTTGGTATTGCA+GGG | - | chr8_2:67992032-67992051 | None:intergenic | 30.0% | |
ATTCAGATATTTGGTATTGC+AGG | - | chr8_2:67992033-67992052 | None:intergenic | 30.0% | |
AGAATAAACCACCTTGAAAT+TGG | + | chr8_2:67992085-67992104 | Msa1264470:intron | 30.0% | |
GAATAAACCACCTTGAAATT+GGG | + | chr8_2:67992086-67992105 | Msa1264470:intron | 30.0% | |
AAAAAAGGAATAGCATATCC+CGG | + | chr8_2:67992228-67992247 | Msa1264470:intron | 30.0% | |
!!! | TGCAGTTAGTTTTATTCCTT+AGG | - | chr8_2:67992261-67992280 | None:intergenic | 30.0% |
AAGTTGGCATAATGGTTAAT+AGG | - | chr8_2:67992298-67992317 | None:intergenic | 30.0% | |
TGTGAATAGTTACTACTTAC+TGG | - | chr8_2:67992432-67992451 | None:intergenic | 30.0% | |
!! | TTCTTTGAAACATCTATCTC+TGG | + | chr8_2:67992552-67992571 | Msa1264470:intron | 30.0% |
CACAAAACAATGAAATCGAT+AGG | - | chr8_2:67992935-67992954 | None:intergenic | 30.0% | |
! | AGATAATGGTATTAAGCATG+TGG | + | chr8_2:67993228-67993247 | Msa1264470:CDS | 30.0% |
! | TAAATTCTGTCTTTGCTGTA+TGG | + | chr8_2:67993445-67993464 | Msa1264470:intron | 30.0% |
ATGGCTTAATACACTAATCA+TGG | + | chr8_2:67993464-67993483 | Msa1264470:intron | 30.0% | |
!! | GCATGGTTATCTTTGATTTT+TGG | - | chr8_2:67993509-67993528 | None:intergenic | 30.0% |
CAAACAATGCTACTAAAATC+AGG | - | chr8_2:67993825-67993844 | None:intergenic | 30.0% | |
!!! | TTTTTTGTGTGAAGAAGTTC+TGG | + | chr8_2:67993934-67993953 | Msa1264470:intron | 30.0% |
!!! | CTCTTTTTTTCTGGTTTATG+TGG | + | chr8_2:67993972-67993991 | Msa1264470:intron | 30.0% |
!!! | TTTTTTTCTGGTTTATGTGG+AGG | + | chr8_2:67993975-67993994 | Msa1264470:intron | 30.0% |
!!! | TTTTTTCTGGTTTATGTGGA+GGG | + | chr8_2:67993976-67993995 | Msa1264470:intron | 30.0% |
GAAATATCTTATACGGAAAG+AGG | - | chr8_2:67994169-67994188 | None:intergenic | 30.0% | |
! | GTCTTTTCTCTATTTAGATG+GGG | + | chr8_2:67994335-67994354 | Msa1264470:intron | 30.0% |
! | CTGATAATTGAACACTTTTC+AGG | + | chr8_2:67994588-67994607 | Msa1264470:intron | 30.0% |
ACAAAGAGAAAGGAAAAAAC+TGG | - | chr8_2:67994763-67994782 | None:intergenic | 30.0% | |
AGAAAATGGAACAAAGAGAA+AGG | - | chr8_2:67994773-67994792 | None:intergenic | 30.0% | |
CCGGATTTAACATTAGAAAA+TGG | - | chr8_2:67994787-67994806 | None:intergenic | 30.0% | |
TTTCTATAAGCATGTGAAGA+TGG | + | chr8_2:67995235-67995254 | Msa1264470:intron | 30.0% | |
AGGAAAAAGAAATTAGACAC+GGG | + | chr8_2:67995281-67995300 | Msa1264470:intron | 30.0% | |
AAATCAAGAATCCATACAAC+TGG | - | chr8_2:67995334-67995353 | None:intergenic | 30.0% | |
CAAGCATGACTATAAGTTAT+TGG | + | chr8_2:67995399-67995418 | Msa1264470:intron | 30.0% | |
TGAATGTAGCCAAAAGAAAT+AGG | - | chr8_2:67995602-67995621 | None:intergenic | 30.0% | |
TCGTCAAAAATATAGGTCAA+GGG | - | chr8_2:67995662-67995681 | None:intergenic | 30.0% | |
AGTTTCCTCGTCAAAAATAT+AGG | - | chr8_2:67995669-67995688 | None:intergenic | 30.0% | |
TCATACATGTGTTCCATTTA+TGG | + | chr8_2:67995728-67995747 | Msa1264470:three_prime_UTR | 30.0% | |
! | CTGCATTGATAACATCTTTA+GGG | - | chr8_2:67995797-67995816 | None:intergenic | 30.0% |
! | TCTGCATTGATAACATCTTT+AGG | - | chr8_2:67995798-67995817 | None:intergenic | 30.0% |
! | ATACTAGATAATTTGGGATG+CGG | + | chr8_2:67995952-67995971 | Msa1264470:three_prime_UTR | 30.0% |
!! | AAGAACTTGATGATGAGTCT+CGG | - | chr8_2:67990961-67990980 | None:intergenic | 35.0% |
ACAATTGACAATCCTTGAGA+AGG | - | chr8_2:67991073-67991092 | None:intergenic | 35.0% | |
TACACTGCAGATTTCAAACT+TGG | + | chr8_2:67991228-67991247 | Msa1264470:intron | 35.0% | |
AGATTTCAAACTTGGAAGTC+TGG | + | chr8_2:67991236-67991255 | Msa1264470:intron | 35.0% | |
TAACAATGTCTTTGGGTCTT+TGG | - | chr8_2:67991264-67991283 | None:intergenic | 35.0% | |
TTATCTGGAGATCTTGATCT+TGG | + | chr8_2:67991292-67991311 | Msa1264470:CDS | 35.0% | |
CTCGATATACTCACTGAATT+TGG | + | chr8_2:67991325-67991344 | Msa1264470:CDS | 35.0% | |
! | GTTTCAATGTATGGGTTAAG+GGG | + | chr8_2:67991413-67991432 | Msa1264470:intron | 35.0% |
CAAAGAAGACTGTGAAGAAA+CGG | - | chr8_2:67991667-67991686 | None:intergenic | 35.0% | |
ATATGATACTGCTGCTAATG+TGG | - | chr8_2:67991693-67991712 | None:intergenic | 35.0% | |
TTTACCTGTGGTTAAATTGG+GGG | - | chr8_2:67991777-67991796 | None:intergenic | 35.0% | |
! | GCTTTTACCTGTGGTTAAAT+TGG | - | chr8_2:67991780-67991799 | None:intergenic | 35.0% |
!!! | GTAAAAGCCCTGCATTTTTT+TGG | + | chr8_2:67991792-67991811 | Msa1264470:intron | 35.0% |
GAACATTCCCAAAAAAATGC+AGG | - | chr8_2:67991803-67991822 | None:intergenic | 35.0% | |
CAGTAACAAGTCACATATAG+AGG | - | chr8_2:67991858-67991877 | None:intergenic | 35.0% | |
ATTCTTTCAAATTTCGGAGG+GGG | - | chr8_2:67991945-67991964 | None:intergenic | 35.0% | |
GTGAGGCAAATTCAGATATT+TGG | - | chr8_2:67992042-67992061 | None:intergenic | 35.0% | |
AGGGCATACAAAAAAGATTG+TGG | - | chr8_2:67992696-67992715 | None:intergenic | 35.0% | |
AAAGCAAAGTTGCATGATCA+GGG | - | chr8_2:67992715-67992734 | None:intergenic | 35.0% | |
AAAAGCAAAGTTGCATGATC+AGG | - | chr8_2:67992716-67992735 | None:intergenic | 35.0% | |
CAATTGCAGAACAATGTTCT+GGG | + | chr8_2:67992751-67992770 | Msa1264470:intron | 35.0% | |
! | TGATTGTCGTTTATCCATTG+CGG | + | chr8_2:67992868-67992887 | Msa1264470:CDS | 35.0% |
TTGTTTCAGATTCCGCAATA+TGG | + | chr8_2:67992981-67993000 | Msa1264470:intron | 35.0% | |
GATAGTTATTGGGATTTGGA+AGG | + | chr8_2:67993399-67993418 | Msa1264470:intron | 35.0% | |
TTTCAGCCGTTAGACATTAA+CGG | - | chr8_2:67993531-67993550 | None:intergenic | 35.0% | |
GAAGATACATTCTACCTTGT+TGG | + | chr8_2:67993585-67993604 | Msa1264470:intron | 35.0% | |
! | CTACCTTGTTGGTTAATTTG+TGG | + | chr8_2:67993596-67993615 | Msa1264470:intron | 35.0% |
TAGCCACAAATTAACCAACA+AGG | - | chr8_2:67993602-67993621 | None:intergenic | 35.0% | |
! | TCCCATCTATATTTTCTCAC+CGG | + | chr8_2:67993759-67993778 | Msa1264470:intron | 35.0% |
TCCGGTGAGAAAATATAGAT+GGG | - | chr8_2:67993763-67993782 | None:intergenic | 35.0% | |
TTCCGGTGAGAAAATATAGA+TGG | - | chr8_2:67993764-67993783 | None:intergenic | 35.0% | |
ATCGGACTTCTCAATTCAAT+GGG | - | chr8_2:67993862-67993881 | None:intergenic | 35.0% | |
!!! | TTTTTCTGGTTTATGTGGAG+GGG | + | chr8_2:67993977-67993996 | Msa1264470:intron | 35.0% |
! | TTGAGTCTGTGTTTTACGAT+TGG | + | chr8_2:67994014-67994033 | Msa1264470:intron | 35.0% |
! | TGAGTCTGTGTTTTACGATT+GGG | + | chr8_2:67994015-67994034 | Msa1264470:intron | 35.0% |
AACTTGAAGGAAATTGAAGG+TGG | + | chr8_2:67994412-67994431 | Msa1264470:CDS | 35.0% | |
! | AATTGAAGGTGGAACTGTTT+TGG | + | chr8_2:67994423-67994442 | Msa1264470:CDS | 35.0% |
!!! | TGATCATACCTTGTCGTTTT+TGG | + | chr8_2:67994558-67994577 | Msa1264470:intron | 35.0% |
AAATCATTGATCGGACGAAA+AGG | + | chr8_2:67994631-67994650 | Msa1264470:CDS | 35.0% | |
TGAGATGCTTGAAAGATTAG+AGG | + | chr8_2:67994672-67994691 | Msa1264470:CDS | 35.0% | |
TTTCTAATGTTAAATCCGGC+AGG | + | chr8_2:67994788-67994807 | Msa1264470:intron | 35.0% | |
CCTAAAATGAATTAGGGTTG+GGG | - | chr8_2:67994918-67994937 | None:intergenic | 35.0% | |
CCCTAAAATGAATTAGGGTT+GGG | - | chr8_2:67994919-67994938 | None:intergenic | 35.0% | |
! | CCCAACCCTAATTCATTTTA+GGG | + | chr8_2:67994916-67994935 | Msa1264470:intron | 35.0% |
! | CCAACCCTAATTCATTTTAG+GGG | + | chr8_2:67994917-67994936 | Msa1264470:intron | 35.0% |
TCCTCCCCTAAAATGAATTA+GGG | - | chr8_2:67994924-67994943 | None:intergenic | 35.0% | |
ATCCTCCCCTAAAATGAATT+AGG | - | chr8_2:67994925-67994944 | None:intergenic | 35.0% | |
GCAGAAAGCAAATACAGAAA+GGG | - | chr8_2:67994953-67994972 | None:intergenic | 35.0% | |
TGCAGAAAGCAAATACAGAA+AGG | - | chr8_2:67994954-67994973 | None:intergenic | 35.0% | |
CTAATCACTATCACAATGCA+TGG | - | chr8_2:67994996-67995015 | None:intergenic | 35.0% | |
GAGACTCTTAAAATTAGGAG+TGG | - | chr8_2:67995035-67995054 | None:intergenic | 35.0% | |
CAAGGGAGACTCTTAAAATT+AGG | - | chr8_2:67995040-67995059 | None:intergenic | 35.0% | |
ATGCAAAGAAACCAGTTGTA+TGG | + | chr8_2:67995320-67995339 | Msa1264470:intron | 35.0% | |
AACAACAACAACAACAACCA+AGG | + | chr8_2:67995466-67995485 | Msa1264470:intron | 35.0% | |
TACATTCATGTGATGCAGAT+TGG | + | chr8_2:67995614-67995633 | Msa1264470:intron | 35.0% | |
CTCGTCAAAAATATAGGTCA+AGG | - | chr8_2:67995663-67995682 | None:intergenic | 35.0% | |
!! | CTTGACCTATATTTTTGACG+AGG | + | chr8_2:67995661-67995680 | Msa1264470:CDS | 35.0% |
ACTAAAGCCCAAGTTTAGAA+AGG | - | chr8_2:67995709-67995728 | None:intergenic | 35.0% | |
! | TGATAACATCTTTAGGGAGA+GGG | - | chr8_2:67995791-67995810 | None:intergenic | 35.0% |
! | TTGATAACATCTTTAGGGAG+AGG | - | chr8_2:67995792-67995811 | None:intergenic | 35.0% |
TTGTTGTGGGTGTTAAAGTA+TGG | + | chr8_2:67995998-67996017 | Msa1264470:three_prime_UTR | 35.0% | |
AATGACAACACAATCTCCTC+CGG | + | chr8_2:67990981-67991000 | Msa1264470:CDS | 40.0% | |
GAAGACATACGACCTTTACT+GGG | - | chr8_2:67991038-67991057 | None:intergenic | 40.0% | |
AGAAGACATACGACCTTTAC+TGG | - | chr8_2:67991039-67991058 | None:intergenic | 40.0% | |
TTGTCAATTGTCAGTCAAGC+AGG | + | chr8_2:67991082-67991101 | Msa1264470:CDS | 40.0% | |
GATCTTGATCTTGGTATCGT+CGG | + | chr8_2:67991301-67991320 | Msa1264470:CDS | 40.0% | |
TATACTCACTGAATTTGGCC+AGG | + | chr8_2:67991330-67991349 | Msa1264470:CDS | 40.0% | |
ATTTCCCCCAATTTAACCAC+AGG | + | chr8_2:67991770-67991789 | Msa1264470:intron | 40.0% | |
! | GACGGTGAAGCAATTTTCAT+CGG | + | chr8_2:67991877-67991896 | Msa1264470:intron | 40.0% |
AAGGTGGTTTATTCTTCGTG+TGG | - | chr8_2:67992080-67992099 | None:intergenic | 40.0% | |
GAAGATTCATGTTTGCGGTT+GGG | - | chr8_2:67992123-67992142 | None:intergenic | 40.0% | |
CATCGGAAGATTCATGTTTG+CGG | - | chr8_2:67992128-67992147 | None:intergenic | 40.0% | |
AATCTTCCGATGCTTTGACA+AGG | + | chr8_2:67992136-67992155 | Msa1264470:intron | 40.0% | |
AAACCATGATGAGCTTCAAG+TGG | - | chr8_2:67992170-67992189 | None:intergenic | 40.0% | |
TTATTCCTTAGGTGCAGAAC+CGG | - | chr8_2:67992250-67992269 | None:intergenic | 40.0% | |
! | ATGTTTGATGTCGCTTCACT+GGG | - | chr8_2:67992322-67992341 | None:intergenic | 40.0% |
! | AATGTTTGATGTCGCTTCAC+TGG | - | chr8_2:67992323-67992342 | None:intergenic | 40.0% |
! | TACTACTTACTGGTCTCAGT+AGG | - | chr8_2:67992422-67992441 | None:intergenic | 40.0% |
ACGACTAGCATCCTCAATTT+CGG | - | chr8_2:67992494-67992513 | None:intergenic | 40.0% | |
ACATCTATCTCTGGTCATCA+TGG | + | chr8_2:67992561-67992580 | Msa1264470:intron | 40.0% | |
!! | ATGCAACTTTGCTTTTCCCT+CGG | + | chr8_2:67992720-67992739 | Msa1264470:intron | 40.0% |
TGCAATTGCATTTAAGCCGA+GGG | - | chr8_2:67992739-67992758 | None:intergenic | 40.0% | |
GCAATTGCAGAACAATGTTC+TGG | + | chr8_2:67992750-67992769 | Msa1264470:intron | 40.0% | |
GATCTTCATTGCCCTGATAA+AGG | - | chr8_2:67992817-67992836 | None:intergenic | 40.0% | |
GTAATTTCAACTCACCGCAA+TGG | - | chr8_2:67992885-67992904 | None:intergenic | 40.0% | |
! | TTGCGGAATCTGAAACAACA+GGG | - | chr8_2:67992979-67992998 | None:intergenic | 40.0% |
! | ATTGCGGAATCTGAAACAAC+AGG | - | chr8_2:67992980-67992999 | None:intergenic | 40.0% |
AGCTAGCAAAAATGCCTCAA+TGG | + | chr8_2:67993033-67993052 | Msa1264470:CDS | 40.0% | |
TTTCCTTCTTACTCTTCAGC+TGG | + | chr8_2:67993189-67993208 | Msa1264470:intron | 40.0% | |
TTCCTTCTTACTCTTCAGCT+GGG | + | chr8_2:67993190-67993209 | Msa1264470:intron | 40.0% | |
ACCATGCCGTTAATGTCTAA+CGG | + | chr8_2:67993522-67993541 | Msa1264470:intron | 40.0% | |
ACATGGCACATAAAGCTTTC+CGG | - | chr8_2:67993781-67993800 | None:intergenic | 40.0% | |
TCGGACTTCTCAATTCAATG+GGG | - | chr8_2:67993861-67993880 | None:intergenic | 40.0% | |
GATCGGACTTCTCAATTCAA+TGG | - | chr8_2:67993863-67993882 | None:intergenic | 40.0% | |
!! | GTGAAGAAGTTCTGGTTTCT+TGG | + | chr8_2:67993942-67993961 | Msa1264470:intron | 40.0% |
!!! | GGCATTGTGCTCTTTTTTTC+TGG | + | chr8_2:67993963-67993982 | Msa1264470:intron | 40.0% |
!!! | TTTTCTGGTTTATGTGGAGG+GGG | + | chr8_2:67993978-67993997 | Msa1264470:intron | 40.0% |
TCACTAAGAGCAGAGTTCAA+TGG | - | chr8_2:67994056-67994075 | None:intergenic | 40.0% | |
ATCTTGGACCTTGTAAGTAG+TGG | + | chr8_2:67994370-67994389 | Msa1264470:CDS | 40.0% | |
ACGTTGTTCCACTACTTACA+AGG | - | chr8_2:67994381-67994400 | None:intergenic | 40.0% | |
!!! | TGGAACTGTTTTGGAAAGTC+AGG | + | chr8_2:67994432-67994451 | Msa1264470:CDS | 40.0% |
ACAGCAGATCATGCTAGTTA+GGG | - | chr8_2:67994481-67994500 | None:intergenic | 40.0% | |
AACAGCAGATCATGCTAGTT+AGG | - | chr8_2:67994482-67994501 | None:intergenic | 40.0% | |
!!! | CTGTTTTTTTAAAAGGCGCC+TGG | + | chr8_2:67994497-67994516 | Msa1264470:intron | 40.0% |
GAGTGAAACCAAAAACGACA+AGG | - | chr8_2:67994569-67994588 | None:intergenic | 40.0% | |
GCAAGCAGGAAATCATTGAT+CGG | + | chr8_2:67994622-67994641 | Msa1264470:CDS | 40.0% | |
! | AAAGATTAGAGGCACATCTG+AGG | + | chr8_2:67994683-67994702 | Msa1264470:CDS | 40.0% |
! | AAGATTAGAGGCACATCTGA+GGG | + | chr8_2:67994684-67994703 | Msa1264470:CDS | 40.0% |
GAGAAAGGAAAAAACTGGTG+AGG | - | chr8_2:67994758-67994777 | None:intergenic | 40.0% | |
! | CCCCAACCCTAATTCATTTT+AGG | + | chr8_2:67994915-67994934 | Msa1264470:intron | 40.0% |
CCCCTAAAATGAATTAGGGT+TGG | - | chr8_2:67994920-67994939 | None:intergenic | 40.0% | |
!! | ACCCTAATTCATTTTAGGGG+AGG | + | chr8_2:67994920-67994939 | Msa1264470:intron | 40.0% |
TCCCTTGATTGTCTATCTAC+AGG | + | chr8_2:67995053-67995072 | Msa1264470:intron | 40.0% | |
CCCTGTAGATAGACAATCAA+GGG | - | chr8_2:67995057-67995076 | None:intergenic | 40.0% | |
CCCTTGATTGTCTATCTACA+GGG | + | chr8_2:67995054-67995073 | Msa1264470:intron | 40.0% | |
TCCCTGTAGATAGACAATCA+AGG | - | chr8_2:67995058-67995077 | None:intergenic | 40.0% | |
CAGAAAACAGGACTTACTGT+GGG | - | chr8_2:67995081-67995100 | None:intergenic | 40.0% | |
TGAAGATGGTTGTGAGCTAA+TGG | + | chr8_2:67995249-67995268 | Msa1264470:intron | 40.0% | |
GAAGATGGTTGTGAGCTAAT+GGG | + | chr8_2:67995250-67995269 | Msa1264470:intron | 40.0% | |
AAGATGGTTGTGAGCTAATG+GGG | + | chr8_2:67995251-67995270 | Msa1264470:intron | 40.0% | |
ATTAGACACGGGTGTTTGAA+TGG | + | chr8_2:67995292-67995311 | Msa1264470:intron | 40.0% | |
TTAGACACGGGTGTTTGAAT+GGG | + | chr8_2:67995293-67995312 | Msa1264470:intron | 40.0% | |
ATTCATGTGATGCAGATTGG+AGG | + | chr8_2:67995617-67995636 | Msa1264470:intron | 40.0% | |
GTCAGCTCCTTTCTAAACTT+GGG | + | chr8_2:67995699-67995718 | Msa1264470:CDS | 40.0% | |
! | GATAACATCTTTAGGGAGAG+GGG | - | chr8_2:67995790-67995809 | None:intergenic | 40.0% |
ATACAAACTGATGCAGAGGT+GGG | - | chr8_2:67995877-67995896 | None:intergenic | 40.0% | |
CAACATACAAACTGATGCAG+AGG | - | chr8_2:67995881-67995900 | None:intergenic | 40.0% | |
!! | AACTTGATGATGAGTCTCGG+AGG | - | chr8_2:67990958-67990977 | None:intergenic | 45.0% |
AGAAGACAAGAGATCCGTCT+GGG | + | chr8_2:67991008-67991027 | Msa1264470:CDS | 45.0% | |
CTTTACTGGGTAAACCCAGA+CGG | - | chr8_2:67991025-67991044 | None:intergenic | 45.0% | |
TGATACACTCGACCTTCTCA+AGG | + | chr8_2:67991058-67991077 | Msa1264470:CDS | 45.0% | |
ATTTGGGCAACATACTGACG+TGG | - | chr8_2:67991113-67991132 | None:intergenic | 45.0% | |
GTATGTTGCCCAAATTCCTC+AGG | + | chr8_2:67991118-67991137 | Msa1264470:CDS | 45.0% | |
CAATGAAGAGAAGGTGAGTG+AGG | - | chr8_2:67991162-67991181 | None:intergenic | 45.0% | |
! | CAATGTATGGGTTAAGGGGA+AGG | + | chr8_2:67991417-67991436 | Msa1264470:intron | 45.0% |
GAAGGAGGAGATTCATAGCA+GGG | + | chr8_2:67991435-67991454 | Msa1264470:intron | 45.0% | |
TGTAGCGTAGGCTATGTAAC+CGG | - | chr8_2:67991516-67991535 | None:intergenic | 45.0% | |
TACATAGCCTACGCTACATG+TGG | + | chr8_2:67991518-67991537 | Msa1264470:intron | 45.0% | |
TCATTTGCCACATGTAGCGT+AGG | - | chr8_2:67991528-67991547 | None:intergenic | 45.0% | |
GTGAAGAAACGGAAACGAGA+AGG | - | chr8_2:67991656-67991675 | None:intergenic | 45.0% | |
! | AAATGCAGGGCTTTTACCTG+TGG | - | chr8_2:67991789-67991808 | None:intergenic | 45.0% |
! | GGCTATAGTATCTGAGACGT+CGG | - | chr8_2:67991837-67991856 | None:intergenic | 45.0% |
GGTTTCGAGCTAAGATAGTG+AGG | - | chr8_2:67992059-67992078 | None:intergenic | 45.0% | |
CTAGAGGTCTCCCAATTTCA+AGG | - | chr8_2:67992099-67992118 | None:intergenic | 45.0% | |
GGAAGATTCATGTTTGCGGT+TGG | - | chr8_2:67992124-67992143 | None:intergenic | 45.0% | |
TTACCGCCTTGTCAAAGCAT+CGG | - | chr8_2:67992145-67992164 | None:intergenic | 45.0% | |
ACTCCACTTGAAGCTCATCA+TGG | + | chr8_2:67992164-67992183 | Msa1264470:intron | 45.0% | |
TATTCCTTAGGTGCAGAACC+GGG | - | chr8_2:67992249-67992268 | None:intergenic | 45.0% | |
CACTGGGAAAGTTGGCATAA+TGG | - | chr8_2:67992306-67992325 | None:intergenic | 45.0% | |
CTCTGATGAGTCCGAAATTG+AGG | + | chr8_2:67992480-67992499 | Msa1264470:intron | 45.0% | |
TTGTGTGCTTTAGCCCTGAT+CGG | + | chr8_2:67992620-67992639 | Msa1264470:intron | 45.0% | |
CTGCAATTGCATTTAAGCCG+AGG | - | chr8_2:67992740-67992759 | None:intergenic | 45.0% | |
AGATCTTATCGTTGTCCACG+AGG | + | chr8_2:67992832-67992851 | Msa1264470:CDS | 45.0% | |
! | TGCGGAATCTGAAACAACAG+GGG | - | chr8_2:67992978-67992997 | None:intergenic | 45.0% |
GGCTTATCTTCTGTCCATTG+AGG | - | chr8_2:67993050-67993069 | None:intergenic | 45.0% | |
CAAACACTATCTCTTACCGC+AGG | - | chr8_2:67993289-67993308 | None:intergenic | 45.0% | |
GCTTTATGTGCCATGTTGAC+CGG | + | chr8_2:67993785-67993804 | Msa1264470:intron | 45.0% | |
TTCACAAATGCCGGTCAACA+TGG | - | chr8_2:67993798-67993817 | None:intergenic | 45.0% | |
TCAGGAACGTTCACAAATGC+CGG | - | chr8_2:67993807-67993826 | None:intergenic | 45.0% | |
!! | TTTCTGGTTTATGTGGAGGG+GGG | + | chr8_2:67993979-67993998 | Msa1264470:intron | 45.0% |
! | TGTTTTACGATTGGGTCCCA+AGG | + | chr8_2:67994023-67994042 | Msa1264470:intron | 45.0% |
CAGCATCAATGAGATGGTGA+CGG | - | chr8_2:67994267-67994286 | None:intergenic | 45.0% | |
TTGATGCTGCTGCCATATGT+TGG | + | chr8_2:67994278-67994297 | Msa1264470:intron | 45.0% | |
! | CATGAGAAGCAGCATTTTCC+AGG | - | chr8_2:67994518-67994537 | None:intergenic | 45.0% |
! | TGCTGCTTCTCATGTCTTGT+TGG | + | chr8_2:67994524-67994543 | Msa1264470:intron | 45.0% |
AAAAAACTGGTGAGGAGACG+AGG | - | chr8_2:67994750-67994769 | None:intergenic | 45.0% | |
! | TCATGTTTGCTACAACCTGC+CGG | - | chr8_2:67994806-67994825 | None:intergenic | 45.0% |
CAGGTTGTAGCAAACATGAG+AGG | + | chr8_2:67994807-67994826 | Msa1264470:intron | 45.0% | |
GCAGAAAACAGGACTTACTG+TGG | - | chr8_2:67995082-67995101 | None:intergenic | 45.0% | |
CTTGGGCACACATATGACTA+TGG | - | chr8_2:67995139-67995158 | None:intergenic | 45.0% | |
AGTCATATGTGTGCCCAAGA+AGG | + | chr8_2:67995140-67995159 | Msa1264470:CDS | 45.0% | |
GACTTGTACAGTGCCTTCTT+GGG | - | chr8_2:67995156-67995175 | None:intergenic | 45.0% | |
AGACTTGTACAGTGCCTTCT+TGG | - | chr8_2:67995157-67995176 | None:intergenic | 45.0% | |
GTCTATACAGCAACTGAGAG+CGG | + | chr8_2:67995173-67995192 | Msa1264470:CDS | 45.0% | |
TGAGCTAATGGGGCTAACTT+AGG | + | chr8_2:67995261-67995280 | Msa1264470:intron | 45.0% | |
CAAGGCTTATCCCACTAAGT+GGG | + | chr8_2:67995484-67995503 | Msa1264470:intron | 45.0% | |
AAGGCTTATCCCACTAAGTG+GGG | + | chr8_2:67995485-67995504 | Msa1264470:intron | 45.0% | |
TTGACGAGGAAACTCCTAGA+TGG | + | chr8_2:67995675-67995694 | Msa1264470:CDS | 45.0% | |
CGTCAGCTCCTTTCTAAACT+TGG | + | chr8_2:67995698-67995717 | Msa1264470:CDS | 45.0% | |
! | CATTTGCTGCTCGATAACAG+AGG | + | chr8_2:67995846-67995865 | Msa1264470:three_prime_UTR | 45.0% |
CATACAAACTGATGCAGAGG+TGG | - | chr8_2:67995878-67995897 | None:intergenic | 45.0% | |
TTGAAAGATGGCCAGCTCAT+TGG | - | chr8_2:67996072-67996091 | None:intergenic | 45.0% | |
GATGGCGAAGCTAAAGTCTG+TGG | - | chr8_2:67990832-67990851 | None:intergenic | 50.0% | |
ATGAGTCTCGGAGGAGATTG+AGG | - | chr8_2:67990949-67990968 | None:intergenic | 50.0% | |
GATCTCTTGTCTTCTGCTGC+CGG | - | chr8_2:67991003-67991022 | None:intergenic | 50.0% | |
CAGAAGACAAGAGATCCGTC+TGG | + | chr8_2:67991007-67991026 | Msa1264470:CDS | 50.0% | |
CGTCTGGGTTTACCCAGTAA+AGG | + | chr8_2:67991023-67991042 | Msa1264470:CDS | 50.0% | |
! | TGTATGGGTTAAGGGGAAGG+AGG | + | chr8_2:67991420-67991439 | Msa1264470:intron | 50.0% |
GGAAGGAGGAGATTCATAGC+AGG | + | chr8_2:67991434-67991453 | Msa1264470:intron | 50.0% | |
GAGGTCTCCCAATTTCAAGG+TGG | - | chr8_2:67992096-67992115 | None:intergenic | 50.0% | |
ATGTTTGCGGTTGGGTCTAG+AGG | - | chr8_2:67992115-67992134 | None:intergenic | 50.0% | |
CTTCCGATGCTTTGACAAGG+CGG | + | chr8_2:67992139-67992158 | Msa1264470:intron | 50.0% | |
ATATCCCGGTTCTGCACCTA+AGG | + | chr8_2:67992242-67992261 | Msa1264470:intron | 50.0% | |
! | TGTCGCTTCACTGGGAAAGT+TGG | - | chr8_2:67992314-67992333 | None:intergenic | 50.0% |
TTCGGACTCATCAGAGCTGT+GGG | - | chr8_2:67992476-67992495 | None:intergenic | 50.0% | |
TTTCGGACTCATCAGAGCTG+TGG | - | chr8_2:67992477-67992496 | None:intergenic | 50.0% | |
TATCGTTGTCCACGAGGCTT+TGG | + | chr8_2:67992838-67992857 | Msa1264470:CDS | 50.0% | |
AATCCAGTTGCAACTCGCAG+AGG | - | chr8_2:67993071-67993090 | None:intergenic | 50.0% | |
GACCCAGCTGAAGAGTAAGA+AGG | - | chr8_2:67993195-67993214 | None:intergenic | 50.0% | |
! | GTGGCATTTTCGACTGCTGA+CGG | + | chr8_2:67993247-67993266 | Msa1264470:CDS | 50.0% |
GCCGTTAGACATTAACGGCA+TGG | - | chr8_2:67993526-67993545 | None:intergenic | 50.0% | |
GTTCAATGGCAACAGGCCTT+GGG | - | chr8_2:67994042-67994061 | None:intergenic | 50.0% | |
AGTTCAATGGCAACAGGCCT+TGG | - | chr8_2:67994043-67994062 | None:intergenic | 50.0% | |
GAGCAGAGTTCAATGGCAAC+AGG | - | chr8_2:67994049-67994068 | None:intergenic | 50.0% | |
TGGCAGCAGCATCAATGAGA+TGG | - | chr8_2:67994273-67994292 | None:intergenic | 50.0% | |
GGGGATTGCTGATGCTATCT+TGG | + | chr8_2:67994354-67994373 | Msa1264470:CDS | 50.0% | |
CATGAGAGGAAGTAGTGCAG+AGG | + | chr8_2:67994821-67994840 | Msa1264470:CDS | 50.0% | |
AGGAAGTAGTGCAGAGGAAG+TGG | + | chr8_2:67994827-67994846 | Msa1264470:CDS | 50.0% | |
TGAGCCAACCATCGTTAGCT+GGG | + | chr8_2:67994862-67994881 | Msa1264470:CDS | 50.0% | |
CTGGGTTGCAGGTGTGATAT+GGG | + | chr8_2:67994880-67994899 | Msa1264470:intron | 50.0% | |
TTTCTGCAAGCGCGATGGAA+AGG | + | chr8_2:67995095-67995114 | Msa1264470:CDS | 50.0% | |
CCACTTAGTGGGATAAGCCT+TGG | - | chr8_2:67995486-67995505 | None:intergenic | 50.0% | |
CCAAGGCTTATCCCACTAAG+TGG | + | chr8_2:67995483-67995502 | Msa1264470:intron | 50.0% | |
CTTATCCCACTAAGTGGGGT+CGG | + | chr8_2:67995489-67995508 | Msa1264470:intron | 50.0% | |
AAGTGGGGTCGGCATTCAAA+TGG | + | chr8_2:67995500-67995519 | Msa1264470:intron | 50.0% | |
ACCCATCTACACCAATGAGC+TGG | + | chr8_2:67996058-67996077 | Msa1264470:three_prime_UTR | 50.0% | |
GCCAGCTCATTGGTGTAGAT+GGG | - | chr8_2:67996062-67996081 | None:intergenic | 50.0% | |
AGGAGGAACGACGCTGATGA+TGG | - | chr8_2:67990850-67990869 | None:intergenic | 55.0% | |
GAGGCGTAGCAGCAATAGAG+AGG | - | chr8_2:67990930-67990949 | None:intergenic | 55.0% | |
TGTGCTTTAGCCCTGATCGG+CGG | + | chr8_2:67992623-67992642 | Msa1264470:intron | 55.0% | |
GCAAGTAGAACCGCCGATCA+GGG | - | chr8_2:67992636-67992655 | None:intergenic | 55.0% | |
!! | GTCCACGAGGCTTTGGAGTA+CGG | + | chr8_2:67992845-67992864 | Msa1264470:CDS | 55.0% |
AAGCCTCTGCGAGTTGCAAC+TGG | + | chr8_2:67993065-67993084 | Msa1264470:CDS | 55.0% | |
AGGCTGCTCTTGTTGCAAGC+AGG | + | chr8_2:67994608-67994627 | Msa1264470:intron | 55.0% | |
! | AGAGGCACATCTGAGGGCTA+TGG | + | chr8_2:67994690-67994709 | Msa1264470:CDS | 55.0% |
GAGGCACATCTGAGGGCTAT+GGG | + | chr8_2:67994691-67994710 | Msa1264470:CDS | 55.0% | |
AGGCACATCTGAGGGCTATG+GGG | + | chr8_2:67994692-67994711 | Msa1264470:CDS | 55.0% | |
CTGAGCCAACCATCGTTAGC+TGG | + | chr8_2:67994861-67994880 | Msa1264470:CDS | 55.0% | |
GCAACCCAGCTAACGATGGT+TGG | - | chr8_2:67994869-67994888 | None:intergenic | 55.0% | |
ACCATCGTTAGCTGGGTTGC+AGG | + | chr8_2:67994869-67994888 | Msa1264470:CDS | 55.0% | |
ACCTGCAACCCAGCTAACGA+TGG | - | chr8_2:67994873-67994892 | None:intergenic | 55.0% | |
GCTGGGTTGCAGGTGTGATA+TGG | + | chr8_2:67994879-67994898 | Msa1264470:intron | 55.0% | |
CCATCGCGCTTGCAGAAAAC+AGG | - | chr8_2:67995093-67995112 | None:intergenic | 55.0% | |
! | CCTGTTTTCTGCAAGCGCGA+TGG | + | chr8_2:67995090-67995109 | Msa1264470:CDS | 55.0% |
GTCATGCTTGCCATCGCCAA+GGG | - | chr8_2:67995389-67995408 | None:intergenic | 55.0% | |
AGTCATGCTTGCCATCGCCA+AGG | - | chr8_2:67995390-67995409 | None:intergenic | 55.0% | |
GAATGCCGACCCCACTTAGT+GGG | - | chr8_2:67995497-67995516 | None:intergenic | 55.0% | |
TGAATGCCGACCCCACTTAG+TGG | - | chr8_2:67995498-67995517 | None:intergenic | 55.0% | |
GTGATGCAGATTGGAGGCAG+CGG | + | chr8_2:67995623-67995642 | Msa1264470:intron | 55.0% | |
GAAAGGAGCTGACGCCATCT+AGG | - | chr8_2:67995692-67995711 | None:intergenic | 55.0% | |
GGCCAGCTCATTGGTGTAGA+TGG | - | chr8_2:67996063-67996082 | None:intergenic | 55.0% | |
CTCTTGTCTTCTGCTGCCGG+AGG | - | chr8_2:67991000-67991019 | None:intergenic | 60.0% | |
CGCAAGTAGAACCGCCGATC+AGG | - | chr8_2:67992637-67992656 | None:intergenic | 60.0% | |
CACCGTACTCCAAAGCCTCG+TGG | - | chr8_2:67992850-67992869 | None:intergenic | 60.0% | |
TTCGACTGCTGACGGAGCAC+TGG | + | chr8_2:67993255-67993274 | Msa1264470:CDS | 60.0% | |
GAGGGCTATGGGGCAGTTCA+CGG | + | chr8_2:67994702-67994721 | Msa1264470:CDS | 60.0% | |
ACTCCCTGACCTGTTGCCCT+TGG | + | chr8_2:67995370-67995389 | Msa1264470:intron | 60.0% | |
TCGCCAAGGGCAACAGGTCA+GGG | - | chr8_2:67995376-67995395 | None:intergenic | 60.0% | |
ATCGCCAAGGGCAACAGGTC+AGG | - | chr8_2:67995377-67995396 | None:intergenic | 60.0% | |
TGACCTGTTGCCCTTGGCGA+TGG | + | chr8_2:67995376-67995395 | Msa1264470:intron | 60.0% | |
TTGCCATCGCCAAGGGCAAC+AGG | - | chr8_2:67995382-67995401 | None:intergenic | 60.0% | |
!! | GACTGCTGACGGAGCACTGG+AGG | + | chr8_2:67993258-67993277 | Msa1264470:CDS | 65.0% |
! | AGCACTGGAGGCAGCTCCTG+CGG | + | chr8_2:67993270-67993289 | Msa1264470:CDS | 65.0% |
GCTGCTGCTGCTGCTGCAGG+AGG | - | chr8_2:67990867-67990886 | None:intergenic | 70.0% | |
GCTGCTGCTGCTGCTGCTGC+AGG | - | chr8_2:67990870-67990889 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8_2 | gene | 67990808 | 67996111 | 67990808 | ID=Msa1264470;Name=Msa1264470 |
chr8_2 | mRNA | 67990808 | 67996111 | 67990808 | ID=Msa1264470-mRNA-1;Parent=Msa1264470;Name=Msa1264470-mRNA-1;_AED=0.18;_eAED=0.18;_QI=68|1|1|1|0.81|0.66|12|364|375 |
chr8_2 | exon | 67990808 | 67990873 | 67990808 | ID=Msa1264470-mRNA-1:exon:22454;Parent=Msa1264470-mRNA-1 |
chr8_2 | exon | 67990895 | 67991139 | 67990895 | ID=Msa1264470-mRNA-1:exon:22455;Parent=Msa1264470-mRNA-1 |
chr8_2 | exon | 67991238 | 67991351 | 67991238 | ID=Msa1264470-mRNA-1:exon:22456;Parent=Msa1264470-mRNA-1 |
chr8_2 | exon | 67992824 | 67992889 | 67992824 | ID=Msa1264470-mRNA-1:exon:22457;Parent=Msa1264470-mRNA-1 |
chr8_2 | exon | 67992990 | 67993097 | 67992990 | ID=Msa1264470-mRNA-1:exon:22458;Parent=Msa1264470-mRNA-1 |
chr8_2 | exon | 67993208 | 67993291 | 67993208 | ID=Msa1264470-mRNA-1:exon:22459;Parent=Msa1264470-mRNA-1 |
chr8_2 | exon | 67994352 | 67994453 | 67994352 | ID=Msa1264470-mRNA-1:exon:22460;Parent=Msa1264470-mRNA-1 |
chr8_2 | exon | 67994610 | 67994723 | 67994610 | ID=Msa1264470-mRNA-1:exon:22461;Parent=Msa1264470-mRNA-1 |
chr8_2 | exon | 67994810 | 67994890 | 67994810 | ID=Msa1264470-mRNA-1:exon:22462;Parent=Msa1264470-mRNA-1 |
chr8_2 | exon | 67995075 | 67995194 | 67995075 | ID=Msa1264470-mRNA-1:exon:22463;Parent=Msa1264470-mRNA-1 |
chr8_2 | exon | 67995632 | 67995749 | 67995632 | ID=Msa1264470-mRNA-1:exon:22464;Parent=Msa1264470-mRNA-1 |
chr8_2 | exon | 67995770 | 67996111 | 67995770 | ID=Msa1264470-mRNA-1:exon:22465;Parent=Msa1264470-mRNA-1 |
chr8_2 | five_prime_UTR | 67990808 | 67990873 | 67990808 | ID=Msa1264470-mRNA-1:five_prime_utr;Parent=Msa1264470-mRNA-1 |
chr8_2 | five_prime_UTR | 67990895 | 67990896 | 67990895 | ID=Msa1264470-mRNA-1:five_prime_utr;Parent=Msa1264470-mRNA-1 |
chr8_2 | CDS | 67990897 | 67991139 | 67990897 | ID=Msa1264470-mRNA-1:cds;Parent=Msa1264470-mRNA-1 |
chr8_2 | CDS | 67991238 | 67991351 | 67991238 | ID=Msa1264470-mRNA-1:cds;Parent=Msa1264470-mRNA-1 |
chr8_2 | CDS | 67992824 | 67992889 | 67992824 | ID=Msa1264470-mRNA-1:cds;Parent=Msa1264470-mRNA-1 |
chr8_2 | CDS | 67992990 | 67993097 | 67992990 | ID=Msa1264470-mRNA-1:cds;Parent=Msa1264470-mRNA-1 |
chr8_2 | CDS | 67993208 | 67993291 | 67993208 | ID=Msa1264470-mRNA-1:cds;Parent=Msa1264470-mRNA-1 |
chr8_2 | CDS | 67994352 | 67994453 | 67994352 | ID=Msa1264470-mRNA-1:cds;Parent=Msa1264470-mRNA-1 |
chr8_2 | CDS | 67994610 | 67994723 | 67994610 | ID=Msa1264470-mRNA-1:cds;Parent=Msa1264470-mRNA-1 |
chr8_2 | CDS | 67994810 | 67994890 | 67994810 | ID=Msa1264470-mRNA-1:cds;Parent=Msa1264470-mRNA-1 |
chr8_2 | CDS | 67995075 | 67995194 | 67995075 | ID=Msa1264470-mRNA-1:cds;Parent=Msa1264470-mRNA-1 |
chr8_2 | CDS | 67995632 | 67995727 | 67995632 | ID=Msa1264470-mRNA-1:cds;Parent=Msa1264470-mRNA-1 |
chr8_2 | three_prime_UTR | 67995728 | 67995749 | 67995728 | ID=Msa1264470-mRNA-1:three_prime_utr;Parent=Msa1264470-mRNA-1 |
chr8_2 | three_prime_UTR | 67995770 | 67996111 | 67995770 | ID=Msa1264470-mRNA-1:three_prime_utr;Parent=Msa1264470-mRNA-1 |
Gene Sequence |
Protein sequence |