AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1264470


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1264470 MtrunA17_Chr4g0073831 96.552 377 7 2 1 375 1 373 0.0 744
Msa1264470 MtrunA17_Chr2g0277331 77.913 412 35 6 3 375 5 399 0.0 614
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1264470 AT1G09795.1 81.894 359 64 1 18 375 55 413 0.0 612
Msa1264470 AT1G58080.1 82.789 337 58 0 39 375 75 411 0.0 592

Find 113 sgRNAs with CRISPR-Local

Find 374 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCATACATGTGTTCCATTTA+TGG 0.073539 8_2:+67995728 Msa1264470:three_prime_UTR
TCTCTTGATACTAGATAATT+TGG 0.099377 8_2:+67995945 Msa1264470:three_prime_UTR
ATTAATTAACCTGAGGAATT+TGG 0.106128 8_2:-67991127 None:intergenic
CCATTATCTTTCATAAATTT+AGG 0.185647 8_2:-67993214 None:intergenic
TAACAATGTCTTTGGGTCTT+TGG 0.196414 8_2:-67991261 None:intergenic
TCTGCATTGATAACATCTTT+AGG 0.240128 8_2:-67995795 None:intergenic
CTCGATATACTCACTGAATT+TGG 0.245090 8_2:+67991325 Msa1264470:CDS
CTGCATTGATAACATCTTTA+GGG 0.247183 8_2:-67995794 None:intergenic
AATTGAAGGTGGAACTGTTT+TGG 0.258121 8_2:+67994423 Msa1264470:CDS
AGAAGACATACGACCTTTAC+TGG 0.266634 8_2:-67991036 None:intergenic
AATAGAGAGGTAAACGAATT+TGG 0.271491 8_2:-67990914 None:intergenic
GGCCAGCTCATTGGTGTAGA+TGG 0.285616 8_2:-67996060 None:intergenic
TTGTTTCAGATTCCGCAATA+TGG 0.287466 8_2:+67992981 Msa1264470:intron
CGTCAGCTCCTTTCTAAACT+TGG 0.295403 8_2:+67995698 Msa1264470:CDS
TTAATTAACCTGAGGAATTT+GGG 0.303133 8_2:-67991126 None:intergenic
CCTAAATTTATGAAAGATAA+TGG 0.327102 8_2:+67993214 Msa1264470:CDS
ATTGTTAGAAAATTGTTATC+TGG 0.350355 8_2:+67991277 Msa1264470:CDS
AGACTTGTACAGTGCCTTCT+TGG 0.359607 8_2:-67995154 None:intergenic
TATCGTTGTCCACGAGGCTT+TGG 0.367464 8_2:+67992838 Msa1264470:CDS
CTCTTGATACTAGATAATTT+GGG 0.374851 8_2:+67995946 Msa1264470:three_prime_UTR
AGATTTCAAACTTGGAAGTC+TGG 0.377840 8_2:+67991236 Msa1264470:intron
TTATCTGGAGATCTTGATCT+TGG 0.378632 8_2:+67991292 Msa1264470:CDS
CCATCGCGCTTGCAGAAAAC+AGG 0.381923 8_2:-67995090 None:intergenic
CTTGGGCACACATATGACTA+TGG 0.388474 8_2:-67995136 None:intergenic
AAGCCTCTGCGAGTTGCAAC+TGG 0.392840 8_2:+67993065 Msa1264470:CDS
TGAGATGCTTGAAAGATTAG+AGG 0.394252 8_2:+67994672 Msa1264470:CDS
TACACTGCAGATTTCAAACT+TGG 0.415322 8_2:+67991228 Msa1264470:intron
ACCATCGTTAGCTGGGTTGC+AGG 0.420563 8_2:+67994869 Msa1264470:CDS
GGGGATTGCTGATGCTATCT+TGG 0.420913 8_2:+67994354 Msa1264470:CDS
AATTGAAGAAAAGAAACTAT+AGG 0.421124 8_2:-67995917 None:intergenic
CTGAGCCAACCATCGTTAGC+TGG 0.423235 8_2:+67994861 Msa1264470:CDS
ATCAAACTTCATTTGAAAGA+TGG 0.432851 8_2:-67996081 None:intergenic
TTGTTGTGGGTGTTAAAGTA+TGG 0.437477 8_2:+67995998 Msa1264470:three_prime_UTR
TTGAAAGATGGCCAGCTCAT+TGG 0.443291 8_2:-67996069 None:intergenic
GACTTGTACAGTGCCTTCTT+GGG 0.445015 8_2:-67995153 None:intergenic
GTCAGCTCCTTTCTAAACTT+GGG 0.445359 8_2:+67995699 Msa1264470:CDS
GTTGAAAGAAAATAACTTGA+AGG 0.459040 8_2:+67994399 Msa1264470:CDS
GAGGGCTATGGGGCAGTTCA+CGG 0.460141 8_2:+67994702 Msa1264470:CDS
AGAGGCACATCTGAGGGCTA+TGG 0.460886 8_2:+67994690 Msa1264470:CDS
TTCGACTGCTGACGGAGCAC+TGG 0.466865 8_2:+67993255 Msa1264470:CDS
GTCCACGAGGCTTTGGAGTA+CGG 0.469178 8_2:+67992845 Msa1264470:CDS
GATCTCTTGTCTTCTGCTGC+CGG 0.470766 8_2:-67991000 None:intergenic
AGGAAGTAGTGCAGAGGAAG+TGG 0.471067 8_2:+67994827 Msa1264470:CDS
TTGACGAGGAAACTCCTAGA+TGG 0.477208 8_2:+67995675 Msa1264470:CDS
AGGCTGCTCTTGTTGCAAGC+AGG 0.487061 8_2:+67994608 Msa1264470:intron
TTTAACTTCAACAATTGTTG+TGG 0.491046 8_2:+67995984 Msa1264470:three_prime_UTR
ACGTTGTTCCACTACTTACA+AGG 0.492916 8_2:-67994378 None:intergenic
TTGTCAATTGTCAGTCAAGC+AGG 0.495907 8_2:+67991082 Msa1264470:CDS
TTAACTTCAACAATTGTTGT+GGG 0.503691 8_2:+67995985 Msa1264470:three_prime_UTR
GAGGCACATCTGAGGGCTAT+GGG 0.505249 8_2:+67994691 Msa1264470:CDS
AAATCATTGATCGGACGAAA+AGG 0.506065 8_2:+67994631 Msa1264470:CDS
GAAAGGAGCTGACGCCATCT+AGG 0.514685 8_2:-67995689 None:intergenic
AGGAGGAACGACGCTGATGA+TGG 0.517427 8_2:-67990847 None:intergenic
ATGAGTCTCGGAGGAGATTG+AGG 0.524502 8_2:-67990946 None:intergenic
CAGAAGACAAGAGATCCGTC+TGG 0.525828 8_2:+67991007 Msa1264470:CDS
GTATGTTGCCCAAATTCCTC+AGG 0.527688 8_2:+67991118 Msa1264470:CDS
ATACTAGATAATTTGGGATG+CGG 0.531826 8_2:+67995952 Msa1264470:three_prime_UTR
ACTAAAGCCCAAGTTTAGAA+AGG 0.532749 8_2:-67995706 None:intergenic
TGATAACATCTTTAGGGAGA+GGG 0.534427 8_2:-67995788 None:intergenic
GCCAGCTCATTGGTGTAGAT+GGG 0.545089 8_2:-67996059 None:intergenic
AATAACTTGAAGGAAATTGA+AGG 0.546732 8_2:+67994409 Msa1264470:CDS
TTGATAACATCTTTAGGGAG+AGG 0.551055 8_2:-67995789 None:intergenic
TGATACACTCGACCTTCTCA+AGG 0.552104 8_2:+67991058 Msa1264470:CDS
GGCTTATCTTCTGTCCATTG+AGG 0.552577 8_2:-67993047 None:intergenic
ATCTTGGACCTTGTAAGTAG+TGG 0.552901 8_2:+67994370 Msa1264470:CDS
GATCTTGATCTTGGTATCGT+CGG 0.554851 8_2:+67991301 Msa1264470:CDS
TGAGCCAACCATCGTTAGCT+GGG 0.555529 8_2:+67994862 Msa1264470:CDS
GACTGCTGACGGAGCACTGG+AGG 0.563946 8_2:+67993258 Msa1264470:CDS
CATACAAACTGATGCAGAGG+TGG 0.567776 8_2:-67995875 None:intergenic
TTAGTGTTCGATTGAGACAC+GGG 0.569033 8_2:-67990805 None:intergenic
AGTCATATGTGTGCCCAAGA+AGG 0.572168 8_2:+67995140 Msa1264470:CDS
TATACTCACTGAATTTGGCC+AGG 0.572345 8_2:+67991330 Msa1264470:CDS
AATGACAACACAATCTCCTC+CGG 0.573673 8_2:+67990981 Msa1264470:CDS
AGCACTGGAGGCAGCTCCTG+CGG 0.577767 8_2:+67993270 Msa1264470:CDS
ATTCATGTGATGCAGATTGG+AGG 0.578035 8_2:+67995617 Msa1264470:intron
GCAACCCAGCTAACGATGGT+TGG 0.580333 8_2:-67994866 None:intergenic
CGTCTGGGTTTACCCAGTAA+AGG 0.581574 8_2:+67991023 Msa1264470:CDS
ACCCATCTACACCAATGAGC+TGG 0.584141 8_2:+67996058 Msa1264470:three_prime_UTR
TGAAAATGTAAATTCACTAG+AGG 0.584392 8_2:+67993010 Msa1264470:CDS
TTTCTGCAAGCGCGATGGAA+AGG 0.585463 8_2:+67995095 Msa1264470:CDS
CTCTTGTCTTCTGCTGCCGG+AGG 0.586047 8_2:-67990997 None:intergenic
AAGATTAGAGGCACATCTGA+GGG 0.596395 8_2:+67994684 Msa1264470:CDS
GTGATGCAGATTGGAGGCAG+CGG 0.598542 8_2:+67995623 Msa1264470:intron
GTAATTTCAACTCACCGCAA+TGG 0.599912 8_2:-67992882 None:intergenic
GTCTATACAGCAACTGAGAG+CGG 0.600820 8_2:+67995173 Msa1264470:CDS
AAGAACTTGATGATGAGTCT+CGG 0.602026 8_2:-67990958 None:intergenic
GATAACATCTTTAGGGAGAG+GGG 0.611885 8_2:-67995787 None:intergenic
GCAAGCAGGAAATCATTGAT+CGG 0.612487 8_2:+67994622 Msa1264470:CDS
AAAGATTAGAGGCACATCTG+AGG 0.618033 8_2:+67994683 Msa1264470:CDS
GAAGACATACGACCTTTACT+GGG 0.626259 8_2:-67991035 None:intergenic
AGAAGACAAGAGATCCGTCT+GGG 0.626407 8_2:+67991008 Msa1264470:CDS
ACAATTGACAATCCTTGAGA+AGG 0.631059 8_2:-67991070 None:intergenic
ATTAGTGTTCGATTGAGACA+CGG 0.632165 8_2:-67990806 None:intergenic
TGATTGTCGTTTATCCATTG+CGG 0.633490 8_2:+67992868 Msa1264470:CDS
AGATAATGGTATTAAGCATG+TGG 0.634797 8_2:+67993228 Msa1264470:CDS
CAACATACAAACTGATGCAG+AGG 0.635116 8_2:-67995878 None:intergenic
GAGGCGTAGCAGCAATAGAG+AGG 0.638994 8_2:-67990927 None:intergenic
CAGAAAACAGGACTTACTGT+GGG 0.647329 8_2:-67995078 None:intergenic
CAGGTTGTAGCAAACATGAG+AGG 0.648123 8_2:+67994807 Msa1264470:intron
AACTTGAAGGAAATTGAAGG+TGG 0.649831 8_2:+67994412 Msa1264470:CDS
GCAGAAAACAGGACTTACTG+TGG 0.653659 8_2:-67995079 None:intergenic
AATCCAGTTGCAACTCGCAG+AGG 0.653851 8_2:-67993068 None:intergenic
CATGAGAGGAAGTAGTGCAG+AGG 0.654817 8_2:+67994821 Msa1264470:CDS
ATACAAACTGATGCAGAGGT+GGG 0.659693 8_2:-67995874 None:intergenic
AGGCACATCTGAGGGCTATG+GGG 0.661787 8_2:+67994692 Msa1264470:CDS
AGATCTTATCGTTGTCCACG+AGG 0.663229 8_2:+67992832 Msa1264470:CDS
ACCTGCAACCCAGCTAACGA+TGG 0.667474 8_2:-67994870 None:intergenic
CACCGTACTCCAAAGCCTCG+TGG 0.672065 8_2:-67992847 None:intergenic
CTTTACTGGGTAAACCCAGA+CGG 0.678884 8_2:-67991022 None:intergenic
ATTTGGGCAACATACTGACG+TGG 0.682664 8_2:-67991110 None:intergenic
GATGGCGAAGCTAAAGTCTG+TGG 0.688485 8_2:-67990829 None:intergenic
CATTTGCTGCTCGATAACAG+AGG 0.690228 8_2:+67995846 Msa1264470:three_prime_UTR
AACTTGATGATGAGTCTCGG+AGG 0.694599 8_2:-67990955 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTCTTTATTATCTTTTCT+CGG + chr8_2:67991365-67991384 Msa1264470:intron 15.0%
!!! TTTTATATGTTTCAATGTAT+GGG + chr8_2:67991405-67991424 Msa1264470:intron 15.0%
!! AAAAAACAATCACATTAATT+GGG - chr8_2:67991493-67991512 None:intergenic 15.0%
!!! ATAAATTCTAAGAAAATAGA+AGG - chr8_2:67991726-67991745 None:intergenic 15.0%
!!! TGTTTGAATTTTAAATTTAG+CGG - chr8_2:67992347-67992366 None:intergenic 15.0%
!! ATGTTAATTGAACTAAATAT+AGG - chr8_2:67992377-67992396 None:intergenic 15.0%
!! TTAAATCAAATGATAGTTAT+TGG + chr8_2:67993388-67993407 Msa1264470:intron 15.0%
!! TAAATCAAATGATAGTTATT+GGG + chr8_2:67993389-67993408 Msa1264470:intron 15.0%
!! ATATTATCTTCAAATTTCAT+AGG + chr8_2:67993552-67993571 Msa1264470:intron 15.0%
!! GATAAAAAATATTGAGAAAA+AGG - chr8_2:67994200-67994219 None:intergenic 15.0%
!! TTATTATTACAATGAAGAGA+AGG - chr8_2:67991171-67991190 None:intergenic 20.0%
!!! AATTTTCTAACAATGTCTTT+GGG - chr8_2:67991271-67991290 None:intergenic 20.0%
!! ATTGTTAGAAAATTGTTATC+TGG + chr8_2:67991277-67991296 Msa1264470:CDS 20.0%
!!! CTTTTATATGTTTCAATGTA+TGG + chr8_2:67991404-67991423 Msa1264470:intron 20.0%
!! GAAAAAACAATCACATTAAT+TGG - chr8_2:67991494-67991513 None:intergenic 20.0%
!!! ATTAATGTGATTGTTTTTTC+CGG + chr8_2:67991494-67991513 Msa1264470:intron 20.0%
!! AATTCCAAAACCAAAATTTA+TGG - chr8_2:67991919-67991938 None:intergenic 20.0%
!!! AATCGTTTTCTATAGAAAAA+AGG + chr8_2:67992213-67992232 Msa1264470:intron 20.0%
!!! GTTTGAATTTTAAATTTAGC+GGG - chr8_2:67992346-67992365 None:intergenic 20.0%
!!! GATAAAAATATTGATTCTCA+TGG - chr8_2:67992781-67992800 None:intergenic 20.0%
!! TATAACAATTATCCTTTATC+AGG + chr8_2:67992802-67992821 Msa1264470:intron 20.0%
!! ATAACAATTATCCTTTATCA+GGG + chr8_2:67992803-67992822 Msa1264470:intron 20.0%
!!! TTTTCAAATATTCCATATTG+CGG - chr8_2:67992996-67993015 None:intergenic 20.0%
!! CCATTATCTTTCATAAATTT+AGG - chr8_2:67993217-67993236 None:intergenic 20.0%
!! CCTAAATTTATGAAAGATAA+TGG + chr8_2:67993214-67993233 Msa1264470:CDS 20.0%
!! AGTCAAGAATTATAAATTGT+AGG + chr8_2:67993664-67993683 Msa1264470:intron 20.0%
!! TGAAAGATATAATAAGCTTT+AGG + chr8_2:67993723-67993742 Msa1264470:intron 20.0%
!! CCAGAAATTTATAATTAGAT+CGG - chr8_2:67993880-67993899 None:intergenic 20.0%
!!! TTTTGCTTATCATATTCATA+TGG + chr8_2:67995434-67995453 Msa1264470:intron 20.0%
!! ACTGTAAAAAAAACCATAAA+TGG - chr8_2:67995744-67995763 None:intergenic 20.0%
!!! ATGGTTTTTTTTACAGTATA+TGG + chr8_2:67995747-67995766 Msa1264470:intron 20.0%
!! AATTGAAGAAAAGAAACTAT+AGG - chr8_2:67995920-67995939 None:intergenic 20.0%
! TTAATTAACCTGAGGAATTT+GGG - chr8_2:67991129-67991148 None:intergenic 25.0%
! ATTAATTAACCTGAGGAATT+TGG - chr8_2:67991130-67991149 None:intergenic 25.0%
! GTAAGTAATTAATTAACCTG+AGG - chr8_2:67991137-67991156 None:intergenic 25.0%
!! CAATTTTCTAACAATGTCTT+TGG - chr8_2:67991272-67991291 None:intergenic 25.0%
! GCAAATGATACAAAATTACT+AGG + chr8_2:67991540-67991559 Msa1264470:intron 25.0%
! TGATACAAAATTACTAGGAA+AGG + chr8_2:67991545-67991564 Msa1264470:intron 25.0%
! GATACAAAATTACTAGGAAA+GGG + chr8_2:67991546-67991565 Msa1264470:intron 25.0%
! AAATTCTTTCAAATTTCGGA+GGG - chr8_2:67991947-67991966 None:intergenic 25.0%
! CCACAAATTCTTTCAAATTT+CGG - chr8_2:67991951-67991970 None:intergenic 25.0%
! TGAAAATGTAAATTCACTAG+AGG + chr8_2:67993010-67993029 Msa1264470:CDS 25.0%
! TAAATGTGAATCACATACAT+AGG - chr8_2:67993096-67993115 None:intergenic 25.0%
!!! ATGTTTTGAAGTTTTATCTG+TGG + chr8_2:67993120-67993139 Msa1264470:intron 25.0%
!! TTTAGAATCTGAAAACATAC+AGG - chr8_2:67993329-67993348 None:intergenic 25.0%
! AAATGATAGTTATTGGGATT+TGG + chr8_2:67993395-67993414 Msa1264470:intron 25.0%
!!! CATGGTTATCTTTGATTTTT+GGG - chr8_2:67993508-67993527 None:intergenic 25.0%
! AGCATTGTTTGAGTAAATTA+AGG + chr8_2:67993834-67993853 Msa1264470:intron 25.0%
! CCGATCTAATTATAAATTTC+TGG + chr8_2:67993877-67993896 Msa1264470:intron 25.0%
! AAACAGGGAAATATCTTATA+CGG - chr8_2:67994176-67994195 None:intergenic 25.0%
! TATTGAGAAAAAGGTAAACA+GGG - chr8_2:67994191-67994210 None:intergenic 25.0%
! ATATTGAGAAAAAGGTAAAC+AGG - chr8_2:67994192-67994211 None:intergenic 25.0%
!! TTGTCTTTTCTCTATTTAGA+TGG + chr8_2:67994333-67994352 Msa1264470:intron 25.0%
!! TGTCTTTTCTCTATTTAGAT+GGG + chr8_2:67994334-67994353 Msa1264470:intron 25.0%
! GTTGAAAGAAAATAACTTGA+AGG + chr8_2:67994399-67994418 Msa1264470:CDS 25.0%
! AATAACTTGAAGGAAATTGA+AGG + chr8_2:67994409-67994428 Msa1264470:CDS 25.0%
!!! TGATCTGCTGTTTTTTTAAA+AGG + chr8_2:67994490-67994509 Msa1264470:intron 25.0%
!! CCATTTTCTAATGTTAAATC+CGG + chr8_2:67994784-67994803 Msa1264470:intron 25.0%
! TAGGAAAAAGAAATTAGACA+CGG + chr8_2:67995280-67995299 Msa1264470:intron 25.0%
! TATGATAAGCAAAAATTGAG+AGG - chr8_2:67995428-67995447 None:intergenic 25.0%
!!! ATTCTCATACCTATTTCTTT+TGG + chr8_2:67995590-67995609 Msa1264470:intron 25.0%
! TCTCTTGATACTAGATAATT+TGG + chr8_2:67995945-67995964 Msa1264470:three_prime_UTR 25.0%
! CTCTTGATACTAGATAATTT+GGG + chr8_2:67995946-67995965 Msa1264470:three_prime_UTR 25.0%
!! TTTAACTTCAACAATTGTTG+TGG + chr8_2:67995984-67996003 Msa1264470:three_prime_UTR 25.0%
! TTAACTTCAACAATTGTTGT+GGG + chr8_2:67995985-67996004 Msa1264470:three_prime_UTR 25.0%
! ATCAAACTTCATTTGAAAGA+TGG - chr8_2:67996084-67996103 None:intergenic 25.0%
AATAGAGAGGTAAACGAATT+TGG - chr8_2:67990917-67990936 None:intergenic 30.0%
AGAAATTAATTAAGCAGACC+TGG - chr8_2:67991351-67991370 None:intergenic 30.0%
! ATGTTTCAATGTATGGGTTA+AGG + chr8_2:67991411-67991430 Msa1264470:intron 30.0%
! TGTTTCAATGTATGGGTTAA+GGG + chr8_2:67991412-67991431 Msa1264470:intron 30.0%
ACAATCACATTAATTGGGAA+CGG - chr8_2:67991488-67991507 None:intergenic 30.0%
TGCTTCTCTGAATAAATTGA+AGG - chr8_2:67991625-67991644 None:intergenic 30.0%
!! GAAATGAAGCTATTTCTACT+AGG - chr8_2:67991755-67991774 None:intergenic 30.0%
! TTTTACCTGTGGTTAAATTG+GGG - chr8_2:67991778-67991797 None:intergenic 30.0%
! CTTTTACCTGTGGTTAAATT+GGG - chr8_2:67991779-67991798 None:intergenic 30.0%
!!! TAAAAGCCCTGCATTTTTTT+GGG + chr8_2:67991793-67991812 Msa1264470:intron 30.0%
AACATTCCCAAAAAAATGCA+GGG - chr8_2:67991802-67991821 None:intergenic 30.0%
!! TATATGTGACTTGTTACTGA+CGG + chr8_2:67991859-67991878 Msa1264470:intron 30.0%
! CAACTAGAGTCCATAAATTT+TGG + chr8_2:67991906-67991925 Msa1264470:intron 30.0%
!!! GAGTCCATAAATTTTGGTTT+TGG + chr8_2:67991912-67991931 Msa1264470:intron 30.0%
AATTCTTTCAAATTTCGGAG+GGG - chr8_2:67991946-67991965 None:intergenic 30.0%
CAAATTCTTTCAAATTTCGG+AGG - chr8_2:67991948-67991967 None:intergenic 30.0%
CCGAAATTTGAAAGAATTTG+TGG + chr8_2:67991948-67991967 Msa1264470:intron 30.0%
TTCAGATATTTGGTATTGCA+GGG - chr8_2:67992032-67992051 None:intergenic 30.0%
ATTCAGATATTTGGTATTGC+AGG - chr8_2:67992033-67992052 None:intergenic 30.0%
AGAATAAACCACCTTGAAAT+TGG + chr8_2:67992085-67992104 Msa1264470:intron 30.0%
GAATAAACCACCTTGAAATT+GGG + chr8_2:67992086-67992105 Msa1264470:intron 30.0%
AAAAAAGGAATAGCATATCC+CGG + chr8_2:67992228-67992247 Msa1264470:intron 30.0%
!!! TGCAGTTAGTTTTATTCCTT+AGG - chr8_2:67992261-67992280 None:intergenic 30.0%
AAGTTGGCATAATGGTTAAT+AGG - chr8_2:67992298-67992317 None:intergenic 30.0%
TGTGAATAGTTACTACTTAC+TGG - chr8_2:67992432-67992451 None:intergenic 30.0%
!! TTCTTTGAAACATCTATCTC+TGG + chr8_2:67992552-67992571 Msa1264470:intron 30.0%
CACAAAACAATGAAATCGAT+AGG - chr8_2:67992935-67992954 None:intergenic 30.0%
! AGATAATGGTATTAAGCATG+TGG + chr8_2:67993228-67993247 Msa1264470:CDS 30.0%
! TAAATTCTGTCTTTGCTGTA+TGG + chr8_2:67993445-67993464 Msa1264470:intron 30.0%
ATGGCTTAATACACTAATCA+TGG + chr8_2:67993464-67993483 Msa1264470:intron 30.0%
!! GCATGGTTATCTTTGATTTT+TGG - chr8_2:67993509-67993528 None:intergenic 30.0%
CAAACAATGCTACTAAAATC+AGG - chr8_2:67993825-67993844 None:intergenic 30.0%
!!! TTTTTTGTGTGAAGAAGTTC+TGG + chr8_2:67993934-67993953 Msa1264470:intron 30.0%
!!! CTCTTTTTTTCTGGTTTATG+TGG + chr8_2:67993972-67993991 Msa1264470:intron 30.0%
!!! TTTTTTTCTGGTTTATGTGG+AGG + chr8_2:67993975-67993994 Msa1264470:intron 30.0%
!!! TTTTTTCTGGTTTATGTGGA+GGG + chr8_2:67993976-67993995 Msa1264470:intron 30.0%
GAAATATCTTATACGGAAAG+AGG - chr8_2:67994169-67994188 None:intergenic 30.0%
! GTCTTTTCTCTATTTAGATG+GGG + chr8_2:67994335-67994354 Msa1264470:intron 30.0%
! CTGATAATTGAACACTTTTC+AGG + chr8_2:67994588-67994607 Msa1264470:intron 30.0%
ACAAAGAGAAAGGAAAAAAC+TGG - chr8_2:67994763-67994782 None:intergenic 30.0%
AGAAAATGGAACAAAGAGAA+AGG - chr8_2:67994773-67994792 None:intergenic 30.0%
CCGGATTTAACATTAGAAAA+TGG - chr8_2:67994787-67994806 None:intergenic 30.0%
TTTCTATAAGCATGTGAAGA+TGG + chr8_2:67995235-67995254 Msa1264470:intron 30.0%
AGGAAAAAGAAATTAGACAC+GGG + chr8_2:67995281-67995300 Msa1264470:intron 30.0%
AAATCAAGAATCCATACAAC+TGG - chr8_2:67995334-67995353 None:intergenic 30.0%
CAAGCATGACTATAAGTTAT+TGG + chr8_2:67995399-67995418 Msa1264470:intron 30.0%
TGAATGTAGCCAAAAGAAAT+AGG - chr8_2:67995602-67995621 None:intergenic 30.0%
TCGTCAAAAATATAGGTCAA+GGG - chr8_2:67995662-67995681 None:intergenic 30.0%
AGTTTCCTCGTCAAAAATAT+AGG - chr8_2:67995669-67995688 None:intergenic 30.0%
TCATACATGTGTTCCATTTA+TGG + chr8_2:67995728-67995747 Msa1264470:three_prime_UTR 30.0%
! CTGCATTGATAACATCTTTA+GGG - chr8_2:67995797-67995816 None:intergenic 30.0%
! TCTGCATTGATAACATCTTT+AGG - chr8_2:67995798-67995817 None:intergenic 30.0%
! ATACTAGATAATTTGGGATG+CGG + chr8_2:67995952-67995971 Msa1264470:three_prime_UTR 30.0%
!! AAGAACTTGATGATGAGTCT+CGG - chr8_2:67990961-67990980 None:intergenic 35.0%
ACAATTGACAATCCTTGAGA+AGG - chr8_2:67991073-67991092 None:intergenic 35.0%
TACACTGCAGATTTCAAACT+TGG + chr8_2:67991228-67991247 Msa1264470:intron 35.0%
AGATTTCAAACTTGGAAGTC+TGG + chr8_2:67991236-67991255 Msa1264470:intron 35.0%
TAACAATGTCTTTGGGTCTT+TGG - chr8_2:67991264-67991283 None:intergenic 35.0%
TTATCTGGAGATCTTGATCT+TGG + chr8_2:67991292-67991311 Msa1264470:CDS 35.0%
CTCGATATACTCACTGAATT+TGG + chr8_2:67991325-67991344 Msa1264470:CDS 35.0%
! GTTTCAATGTATGGGTTAAG+GGG + chr8_2:67991413-67991432 Msa1264470:intron 35.0%
CAAAGAAGACTGTGAAGAAA+CGG - chr8_2:67991667-67991686 None:intergenic 35.0%
ATATGATACTGCTGCTAATG+TGG - chr8_2:67991693-67991712 None:intergenic 35.0%
TTTACCTGTGGTTAAATTGG+GGG - chr8_2:67991777-67991796 None:intergenic 35.0%
! GCTTTTACCTGTGGTTAAAT+TGG - chr8_2:67991780-67991799 None:intergenic 35.0%
!!! GTAAAAGCCCTGCATTTTTT+TGG + chr8_2:67991792-67991811 Msa1264470:intron 35.0%
GAACATTCCCAAAAAAATGC+AGG - chr8_2:67991803-67991822 None:intergenic 35.0%
CAGTAACAAGTCACATATAG+AGG - chr8_2:67991858-67991877 None:intergenic 35.0%
ATTCTTTCAAATTTCGGAGG+GGG - chr8_2:67991945-67991964 None:intergenic 35.0%
GTGAGGCAAATTCAGATATT+TGG - chr8_2:67992042-67992061 None:intergenic 35.0%
AGGGCATACAAAAAAGATTG+TGG - chr8_2:67992696-67992715 None:intergenic 35.0%
AAAGCAAAGTTGCATGATCA+GGG - chr8_2:67992715-67992734 None:intergenic 35.0%
AAAAGCAAAGTTGCATGATC+AGG - chr8_2:67992716-67992735 None:intergenic 35.0%
CAATTGCAGAACAATGTTCT+GGG + chr8_2:67992751-67992770 Msa1264470:intron 35.0%
! TGATTGTCGTTTATCCATTG+CGG + chr8_2:67992868-67992887 Msa1264470:CDS 35.0%
TTGTTTCAGATTCCGCAATA+TGG + chr8_2:67992981-67993000 Msa1264470:intron 35.0%
GATAGTTATTGGGATTTGGA+AGG + chr8_2:67993399-67993418 Msa1264470:intron 35.0%
TTTCAGCCGTTAGACATTAA+CGG - chr8_2:67993531-67993550 None:intergenic 35.0%
GAAGATACATTCTACCTTGT+TGG + chr8_2:67993585-67993604 Msa1264470:intron 35.0%
! CTACCTTGTTGGTTAATTTG+TGG + chr8_2:67993596-67993615 Msa1264470:intron 35.0%
TAGCCACAAATTAACCAACA+AGG - chr8_2:67993602-67993621 None:intergenic 35.0%
! TCCCATCTATATTTTCTCAC+CGG + chr8_2:67993759-67993778 Msa1264470:intron 35.0%
TCCGGTGAGAAAATATAGAT+GGG - chr8_2:67993763-67993782 None:intergenic 35.0%
TTCCGGTGAGAAAATATAGA+TGG - chr8_2:67993764-67993783 None:intergenic 35.0%
ATCGGACTTCTCAATTCAAT+GGG - chr8_2:67993862-67993881 None:intergenic 35.0%
!!! TTTTTCTGGTTTATGTGGAG+GGG + chr8_2:67993977-67993996 Msa1264470:intron 35.0%
! TTGAGTCTGTGTTTTACGAT+TGG + chr8_2:67994014-67994033 Msa1264470:intron 35.0%
! TGAGTCTGTGTTTTACGATT+GGG + chr8_2:67994015-67994034 Msa1264470:intron 35.0%
AACTTGAAGGAAATTGAAGG+TGG + chr8_2:67994412-67994431 Msa1264470:CDS 35.0%
! AATTGAAGGTGGAACTGTTT+TGG + chr8_2:67994423-67994442 Msa1264470:CDS 35.0%
!!! TGATCATACCTTGTCGTTTT+TGG + chr8_2:67994558-67994577 Msa1264470:intron 35.0%
AAATCATTGATCGGACGAAA+AGG + chr8_2:67994631-67994650 Msa1264470:CDS 35.0%
TGAGATGCTTGAAAGATTAG+AGG + chr8_2:67994672-67994691 Msa1264470:CDS 35.0%
TTTCTAATGTTAAATCCGGC+AGG + chr8_2:67994788-67994807 Msa1264470:intron 35.0%
CCTAAAATGAATTAGGGTTG+GGG - chr8_2:67994918-67994937 None:intergenic 35.0%
CCCTAAAATGAATTAGGGTT+GGG - chr8_2:67994919-67994938 None:intergenic 35.0%
! CCCAACCCTAATTCATTTTA+GGG + chr8_2:67994916-67994935 Msa1264470:intron 35.0%
! CCAACCCTAATTCATTTTAG+GGG + chr8_2:67994917-67994936 Msa1264470:intron 35.0%
TCCTCCCCTAAAATGAATTA+GGG - chr8_2:67994924-67994943 None:intergenic 35.0%
ATCCTCCCCTAAAATGAATT+AGG - chr8_2:67994925-67994944 None:intergenic 35.0%
GCAGAAAGCAAATACAGAAA+GGG - chr8_2:67994953-67994972 None:intergenic 35.0%
TGCAGAAAGCAAATACAGAA+AGG - chr8_2:67994954-67994973 None:intergenic 35.0%
CTAATCACTATCACAATGCA+TGG - chr8_2:67994996-67995015 None:intergenic 35.0%
GAGACTCTTAAAATTAGGAG+TGG - chr8_2:67995035-67995054 None:intergenic 35.0%
CAAGGGAGACTCTTAAAATT+AGG - chr8_2:67995040-67995059 None:intergenic 35.0%
ATGCAAAGAAACCAGTTGTA+TGG + chr8_2:67995320-67995339 Msa1264470:intron 35.0%
AACAACAACAACAACAACCA+AGG + chr8_2:67995466-67995485 Msa1264470:intron 35.0%
TACATTCATGTGATGCAGAT+TGG + chr8_2:67995614-67995633 Msa1264470:intron 35.0%
CTCGTCAAAAATATAGGTCA+AGG - chr8_2:67995663-67995682 None:intergenic 35.0%
!! CTTGACCTATATTTTTGACG+AGG + chr8_2:67995661-67995680 Msa1264470:CDS 35.0%
ACTAAAGCCCAAGTTTAGAA+AGG - chr8_2:67995709-67995728 None:intergenic 35.0%
! TGATAACATCTTTAGGGAGA+GGG - chr8_2:67995791-67995810 None:intergenic 35.0%
! TTGATAACATCTTTAGGGAG+AGG - chr8_2:67995792-67995811 None:intergenic 35.0%
TTGTTGTGGGTGTTAAAGTA+TGG + chr8_2:67995998-67996017 Msa1264470:three_prime_UTR 35.0%
AATGACAACACAATCTCCTC+CGG + chr8_2:67990981-67991000 Msa1264470:CDS 40.0%
GAAGACATACGACCTTTACT+GGG - chr8_2:67991038-67991057 None:intergenic 40.0%
AGAAGACATACGACCTTTAC+TGG - chr8_2:67991039-67991058 None:intergenic 40.0%
TTGTCAATTGTCAGTCAAGC+AGG + chr8_2:67991082-67991101 Msa1264470:CDS 40.0%
GATCTTGATCTTGGTATCGT+CGG + chr8_2:67991301-67991320 Msa1264470:CDS 40.0%
TATACTCACTGAATTTGGCC+AGG + chr8_2:67991330-67991349 Msa1264470:CDS 40.0%
ATTTCCCCCAATTTAACCAC+AGG + chr8_2:67991770-67991789 Msa1264470:intron 40.0%
! GACGGTGAAGCAATTTTCAT+CGG + chr8_2:67991877-67991896 Msa1264470:intron 40.0%
AAGGTGGTTTATTCTTCGTG+TGG - chr8_2:67992080-67992099 None:intergenic 40.0%
GAAGATTCATGTTTGCGGTT+GGG - chr8_2:67992123-67992142 None:intergenic 40.0%
CATCGGAAGATTCATGTTTG+CGG - chr8_2:67992128-67992147 None:intergenic 40.0%
AATCTTCCGATGCTTTGACA+AGG + chr8_2:67992136-67992155 Msa1264470:intron 40.0%
AAACCATGATGAGCTTCAAG+TGG - chr8_2:67992170-67992189 None:intergenic 40.0%
TTATTCCTTAGGTGCAGAAC+CGG - chr8_2:67992250-67992269 None:intergenic 40.0%
! ATGTTTGATGTCGCTTCACT+GGG - chr8_2:67992322-67992341 None:intergenic 40.0%
! AATGTTTGATGTCGCTTCAC+TGG - chr8_2:67992323-67992342 None:intergenic 40.0%
! TACTACTTACTGGTCTCAGT+AGG - chr8_2:67992422-67992441 None:intergenic 40.0%
ACGACTAGCATCCTCAATTT+CGG - chr8_2:67992494-67992513 None:intergenic 40.0%
ACATCTATCTCTGGTCATCA+TGG + chr8_2:67992561-67992580 Msa1264470:intron 40.0%
!! ATGCAACTTTGCTTTTCCCT+CGG + chr8_2:67992720-67992739 Msa1264470:intron 40.0%
TGCAATTGCATTTAAGCCGA+GGG - chr8_2:67992739-67992758 None:intergenic 40.0%
GCAATTGCAGAACAATGTTC+TGG + chr8_2:67992750-67992769 Msa1264470:intron 40.0%
GATCTTCATTGCCCTGATAA+AGG - chr8_2:67992817-67992836 None:intergenic 40.0%
GTAATTTCAACTCACCGCAA+TGG - chr8_2:67992885-67992904 None:intergenic 40.0%
! TTGCGGAATCTGAAACAACA+GGG - chr8_2:67992979-67992998 None:intergenic 40.0%
! ATTGCGGAATCTGAAACAAC+AGG - chr8_2:67992980-67992999 None:intergenic 40.0%
AGCTAGCAAAAATGCCTCAA+TGG + chr8_2:67993033-67993052 Msa1264470:CDS 40.0%
TTTCCTTCTTACTCTTCAGC+TGG + chr8_2:67993189-67993208 Msa1264470:intron 40.0%
TTCCTTCTTACTCTTCAGCT+GGG + chr8_2:67993190-67993209 Msa1264470:intron 40.0%
ACCATGCCGTTAATGTCTAA+CGG + chr8_2:67993522-67993541 Msa1264470:intron 40.0%
ACATGGCACATAAAGCTTTC+CGG - chr8_2:67993781-67993800 None:intergenic 40.0%
TCGGACTTCTCAATTCAATG+GGG - chr8_2:67993861-67993880 None:intergenic 40.0%
GATCGGACTTCTCAATTCAA+TGG - chr8_2:67993863-67993882 None:intergenic 40.0%
!! GTGAAGAAGTTCTGGTTTCT+TGG + chr8_2:67993942-67993961 Msa1264470:intron 40.0%
!!! GGCATTGTGCTCTTTTTTTC+TGG + chr8_2:67993963-67993982 Msa1264470:intron 40.0%
!!! TTTTCTGGTTTATGTGGAGG+GGG + chr8_2:67993978-67993997 Msa1264470:intron 40.0%
TCACTAAGAGCAGAGTTCAA+TGG - chr8_2:67994056-67994075 None:intergenic 40.0%
ATCTTGGACCTTGTAAGTAG+TGG + chr8_2:67994370-67994389 Msa1264470:CDS 40.0%
ACGTTGTTCCACTACTTACA+AGG - chr8_2:67994381-67994400 None:intergenic 40.0%
!!! TGGAACTGTTTTGGAAAGTC+AGG + chr8_2:67994432-67994451 Msa1264470:CDS 40.0%
ACAGCAGATCATGCTAGTTA+GGG - chr8_2:67994481-67994500 None:intergenic 40.0%
AACAGCAGATCATGCTAGTT+AGG - chr8_2:67994482-67994501 None:intergenic 40.0%
!!! CTGTTTTTTTAAAAGGCGCC+TGG + chr8_2:67994497-67994516 Msa1264470:intron 40.0%
GAGTGAAACCAAAAACGACA+AGG - chr8_2:67994569-67994588 None:intergenic 40.0%
GCAAGCAGGAAATCATTGAT+CGG + chr8_2:67994622-67994641 Msa1264470:CDS 40.0%
! AAAGATTAGAGGCACATCTG+AGG + chr8_2:67994683-67994702 Msa1264470:CDS 40.0%
! AAGATTAGAGGCACATCTGA+GGG + chr8_2:67994684-67994703 Msa1264470:CDS 40.0%
GAGAAAGGAAAAAACTGGTG+AGG - chr8_2:67994758-67994777 None:intergenic 40.0%
! CCCCAACCCTAATTCATTTT+AGG + chr8_2:67994915-67994934 Msa1264470:intron 40.0%
CCCCTAAAATGAATTAGGGT+TGG - chr8_2:67994920-67994939 None:intergenic 40.0%
!! ACCCTAATTCATTTTAGGGG+AGG + chr8_2:67994920-67994939 Msa1264470:intron 40.0%
TCCCTTGATTGTCTATCTAC+AGG + chr8_2:67995053-67995072 Msa1264470:intron 40.0%
CCCTGTAGATAGACAATCAA+GGG - chr8_2:67995057-67995076 None:intergenic 40.0%
CCCTTGATTGTCTATCTACA+GGG + chr8_2:67995054-67995073 Msa1264470:intron 40.0%
TCCCTGTAGATAGACAATCA+AGG - chr8_2:67995058-67995077 None:intergenic 40.0%
CAGAAAACAGGACTTACTGT+GGG - chr8_2:67995081-67995100 None:intergenic 40.0%
TGAAGATGGTTGTGAGCTAA+TGG + chr8_2:67995249-67995268 Msa1264470:intron 40.0%
GAAGATGGTTGTGAGCTAAT+GGG + chr8_2:67995250-67995269 Msa1264470:intron 40.0%
AAGATGGTTGTGAGCTAATG+GGG + chr8_2:67995251-67995270 Msa1264470:intron 40.0%
ATTAGACACGGGTGTTTGAA+TGG + chr8_2:67995292-67995311 Msa1264470:intron 40.0%
TTAGACACGGGTGTTTGAAT+GGG + chr8_2:67995293-67995312 Msa1264470:intron 40.0%
ATTCATGTGATGCAGATTGG+AGG + chr8_2:67995617-67995636 Msa1264470:intron 40.0%
GTCAGCTCCTTTCTAAACTT+GGG + chr8_2:67995699-67995718 Msa1264470:CDS 40.0%
! GATAACATCTTTAGGGAGAG+GGG - chr8_2:67995790-67995809 None:intergenic 40.0%
ATACAAACTGATGCAGAGGT+GGG - chr8_2:67995877-67995896 None:intergenic 40.0%
CAACATACAAACTGATGCAG+AGG - chr8_2:67995881-67995900 None:intergenic 40.0%
!! AACTTGATGATGAGTCTCGG+AGG - chr8_2:67990958-67990977 None:intergenic 45.0%
AGAAGACAAGAGATCCGTCT+GGG + chr8_2:67991008-67991027 Msa1264470:CDS 45.0%
CTTTACTGGGTAAACCCAGA+CGG - chr8_2:67991025-67991044 None:intergenic 45.0%
TGATACACTCGACCTTCTCA+AGG + chr8_2:67991058-67991077 Msa1264470:CDS 45.0%
ATTTGGGCAACATACTGACG+TGG - chr8_2:67991113-67991132 None:intergenic 45.0%
GTATGTTGCCCAAATTCCTC+AGG + chr8_2:67991118-67991137 Msa1264470:CDS 45.0%
CAATGAAGAGAAGGTGAGTG+AGG - chr8_2:67991162-67991181 None:intergenic 45.0%
! CAATGTATGGGTTAAGGGGA+AGG + chr8_2:67991417-67991436 Msa1264470:intron 45.0%
GAAGGAGGAGATTCATAGCA+GGG + chr8_2:67991435-67991454 Msa1264470:intron 45.0%
TGTAGCGTAGGCTATGTAAC+CGG - chr8_2:67991516-67991535 None:intergenic 45.0%
TACATAGCCTACGCTACATG+TGG + chr8_2:67991518-67991537 Msa1264470:intron 45.0%
TCATTTGCCACATGTAGCGT+AGG - chr8_2:67991528-67991547 None:intergenic 45.0%
GTGAAGAAACGGAAACGAGA+AGG - chr8_2:67991656-67991675 None:intergenic 45.0%
! AAATGCAGGGCTTTTACCTG+TGG - chr8_2:67991789-67991808 None:intergenic 45.0%
! GGCTATAGTATCTGAGACGT+CGG - chr8_2:67991837-67991856 None:intergenic 45.0%
GGTTTCGAGCTAAGATAGTG+AGG - chr8_2:67992059-67992078 None:intergenic 45.0%
CTAGAGGTCTCCCAATTTCA+AGG - chr8_2:67992099-67992118 None:intergenic 45.0%
GGAAGATTCATGTTTGCGGT+TGG - chr8_2:67992124-67992143 None:intergenic 45.0%
TTACCGCCTTGTCAAAGCAT+CGG - chr8_2:67992145-67992164 None:intergenic 45.0%
ACTCCACTTGAAGCTCATCA+TGG + chr8_2:67992164-67992183 Msa1264470:intron 45.0%
TATTCCTTAGGTGCAGAACC+GGG - chr8_2:67992249-67992268 None:intergenic 45.0%
CACTGGGAAAGTTGGCATAA+TGG - chr8_2:67992306-67992325 None:intergenic 45.0%
CTCTGATGAGTCCGAAATTG+AGG + chr8_2:67992480-67992499 Msa1264470:intron 45.0%
TTGTGTGCTTTAGCCCTGAT+CGG + chr8_2:67992620-67992639 Msa1264470:intron 45.0%
CTGCAATTGCATTTAAGCCG+AGG - chr8_2:67992740-67992759 None:intergenic 45.0%
AGATCTTATCGTTGTCCACG+AGG + chr8_2:67992832-67992851 Msa1264470:CDS 45.0%
! TGCGGAATCTGAAACAACAG+GGG - chr8_2:67992978-67992997 None:intergenic 45.0%
GGCTTATCTTCTGTCCATTG+AGG - chr8_2:67993050-67993069 None:intergenic 45.0%
CAAACACTATCTCTTACCGC+AGG - chr8_2:67993289-67993308 None:intergenic 45.0%
GCTTTATGTGCCATGTTGAC+CGG + chr8_2:67993785-67993804 Msa1264470:intron 45.0%
TTCACAAATGCCGGTCAACA+TGG - chr8_2:67993798-67993817 None:intergenic 45.0%
TCAGGAACGTTCACAAATGC+CGG - chr8_2:67993807-67993826 None:intergenic 45.0%
!! TTTCTGGTTTATGTGGAGGG+GGG + chr8_2:67993979-67993998 Msa1264470:intron 45.0%
! TGTTTTACGATTGGGTCCCA+AGG + chr8_2:67994023-67994042 Msa1264470:intron 45.0%
CAGCATCAATGAGATGGTGA+CGG - chr8_2:67994267-67994286 None:intergenic 45.0%
TTGATGCTGCTGCCATATGT+TGG + chr8_2:67994278-67994297 Msa1264470:intron 45.0%
! CATGAGAAGCAGCATTTTCC+AGG - chr8_2:67994518-67994537 None:intergenic 45.0%
! TGCTGCTTCTCATGTCTTGT+TGG + chr8_2:67994524-67994543 Msa1264470:intron 45.0%
AAAAAACTGGTGAGGAGACG+AGG - chr8_2:67994750-67994769 None:intergenic 45.0%
! TCATGTTTGCTACAACCTGC+CGG - chr8_2:67994806-67994825 None:intergenic 45.0%
CAGGTTGTAGCAAACATGAG+AGG + chr8_2:67994807-67994826 Msa1264470:intron 45.0%
GCAGAAAACAGGACTTACTG+TGG - chr8_2:67995082-67995101 None:intergenic 45.0%
CTTGGGCACACATATGACTA+TGG - chr8_2:67995139-67995158 None:intergenic 45.0%
AGTCATATGTGTGCCCAAGA+AGG + chr8_2:67995140-67995159 Msa1264470:CDS 45.0%
GACTTGTACAGTGCCTTCTT+GGG - chr8_2:67995156-67995175 None:intergenic 45.0%
AGACTTGTACAGTGCCTTCT+TGG - chr8_2:67995157-67995176 None:intergenic 45.0%
GTCTATACAGCAACTGAGAG+CGG + chr8_2:67995173-67995192 Msa1264470:CDS 45.0%
TGAGCTAATGGGGCTAACTT+AGG + chr8_2:67995261-67995280 Msa1264470:intron 45.0%
CAAGGCTTATCCCACTAAGT+GGG + chr8_2:67995484-67995503 Msa1264470:intron 45.0%
AAGGCTTATCCCACTAAGTG+GGG + chr8_2:67995485-67995504 Msa1264470:intron 45.0%
TTGACGAGGAAACTCCTAGA+TGG + chr8_2:67995675-67995694 Msa1264470:CDS 45.0%
CGTCAGCTCCTTTCTAAACT+TGG + chr8_2:67995698-67995717 Msa1264470:CDS 45.0%
! CATTTGCTGCTCGATAACAG+AGG + chr8_2:67995846-67995865 Msa1264470:three_prime_UTR 45.0%
CATACAAACTGATGCAGAGG+TGG - chr8_2:67995878-67995897 None:intergenic 45.0%
TTGAAAGATGGCCAGCTCAT+TGG - chr8_2:67996072-67996091 None:intergenic 45.0%
GATGGCGAAGCTAAAGTCTG+TGG - chr8_2:67990832-67990851 None:intergenic 50.0%
ATGAGTCTCGGAGGAGATTG+AGG - chr8_2:67990949-67990968 None:intergenic 50.0%
GATCTCTTGTCTTCTGCTGC+CGG - chr8_2:67991003-67991022 None:intergenic 50.0%
CAGAAGACAAGAGATCCGTC+TGG + chr8_2:67991007-67991026 Msa1264470:CDS 50.0%
CGTCTGGGTTTACCCAGTAA+AGG + chr8_2:67991023-67991042 Msa1264470:CDS 50.0%
! TGTATGGGTTAAGGGGAAGG+AGG + chr8_2:67991420-67991439 Msa1264470:intron 50.0%
GGAAGGAGGAGATTCATAGC+AGG + chr8_2:67991434-67991453 Msa1264470:intron 50.0%
GAGGTCTCCCAATTTCAAGG+TGG - chr8_2:67992096-67992115 None:intergenic 50.0%
ATGTTTGCGGTTGGGTCTAG+AGG - chr8_2:67992115-67992134 None:intergenic 50.0%
CTTCCGATGCTTTGACAAGG+CGG + chr8_2:67992139-67992158 Msa1264470:intron 50.0%
ATATCCCGGTTCTGCACCTA+AGG + chr8_2:67992242-67992261 Msa1264470:intron 50.0%
! TGTCGCTTCACTGGGAAAGT+TGG - chr8_2:67992314-67992333 None:intergenic 50.0%
TTCGGACTCATCAGAGCTGT+GGG - chr8_2:67992476-67992495 None:intergenic 50.0%
TTTCGGACTCATCAGAGCTG+TGG - chr8_2:67992477-67992496 None:intergenic 50.0%
TATCGTTGTCCACGAGGCTT+TGG + chr8_2:67992838-67992857 Msa1264470:CDS 50.0%
AATCCAGTTGCAACTCGCAG+AGG - chr8_2:67993071-67993090 None:intergenic 50.0%
GACCCAGCTGAAGAGTAAGA+AGG - chr8_2:67993195-67993214 None:intergenic 50.0%
! GTGGCATTTTCGACTGCTGA+CGG + chr8_2:67993247-67993266 Msa1264470:CDS 50.0%
GCCGTTAGACATTAACGGCA+TGG - chr8_2:67993526-67993545 None:intergenic 50.0%
GTTCAATGGCAACAGGCCTT+GGG - chr8_2:67994042-67994061 None:intergenic 50.0%
AGTTCAATGGCAACAGGCCT+TGG - chr8_2:67994043-67994062 None:intergenic 50.0%
GAGCAGAGTTCAATGGCAAC+AGG - chr8_2:67994049-67994068 None:intergenic 50.0%
TGGCAGCAGCATCAATGAGA+TGG - chr8_2:67994273-67994292 None:intergenic 50.0%
GGGGATTGCTGATGCTATCT+TGG + chr8_2:67994354-67994373 Msa1264470:CDS 50.0%
CATGAGAGGAAGTAGTGCAG+AGG + chr8_2:67994821-67994840 Msa1264470:CDS 50.0%
AGGAAGTAGTGCAGAGGAAG+TGG + chr8_2:67994827-67994846 Msa1264470:CDS 50.0%
TGAGCCAACCATCGTTAGCT+GGG + chr8_2:67994862-67994881 Msa1264470:CDS 50.0%
CTGGGTTGCAGGTGTGATAT+GGG + chr8_2:67994880-67994899 Msa1264470:intron 50.0%
TTTCTGCAAGCGCGATGGAA+AGG + chr8_2:67995095-67995114 Msa1264470:CDS 50.0%
CCACTTAGTGGGATAAGCCT+TGG - chr8_2:67995486-67995505 None:intergenic 50.0%
CCAAGGCTTATCCCACTAAG+TGG + chr8_2:67995483-67995502 Msa1264470:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG + chr8_2:67995489-67995508 Msa1264470:intron 50.0%
AAGTGGGGTCGGCATTCAAA+TGG + chr8_2:67995500-67995519 Msa1264470:intron 50.0%
ACCCATCTACACCAATGAGC+TGG + chr8_2:67996058-67996077 Msa1264470:three_prime_UTR 50.0%
GCCAGCTCATTGGTGTAGAT+GGG - chr8_2:67996062-67996081 None:intergenic 50.0%
AGGAGGAACGACGCTGATGA+TGG - chr8_2:67990850-67990869 None:intergenic 55.0%
GAGGCGTAGCAGCAATAGAG+AGG - chr8_2:67990930-67990949 None:intergenic 55.0%
TGTGCTTTAGCCCTGATCGG+CGG + chr8_2:67992623-67992642 Msa1264470:intron 55.0%
GCAAGTAGAACCGCCGATCA+GGG - chr8_2:67992636-67992655 None:intergenic 55.0%
!! GTCCACGAGGCTTTGGAGTA+CGG + chr8_2:67992845-67992864 Msa1264470:CDS 55.0%
AAGCCTCTGCGAGTTGCAAC+TGG + chr8_2:67993065-67993084 Msa1264470:CDS 55.0%
AGGCTGCTCTTGTTGCAAGC+AGG + chr8_2:67994608-67994627 Msa1264470:intron 55.0%
! AGAGGCACATCTGAGGGCTA+TGG + chr8_2:67994690-67994709 Msa1264470:CDS 55.0%
GAGGCACATCTGAGGGCTAT+GGG + chr8_2:67994691-67994710 Msa1264470:CDS 55.0%
AGGCACATCTGAGGGCTATG+GGG + chr8_2:67994692-67994711 Msa1264470:CDS 55.0%
CTGAGCCAACCATCGTTAGC+TGG + chr8_2:67994861-67994880 Msa1264470:CDS 55.0%
GCAACCCAGCTAACGATGGT+TGG - chr8_2:67994869-67994888 None:intergenic 55.0%
ACCATCGTTAGCTGGGTTGC+AGG + chr8_2:67994869-67994888 Msa1264470:CDS 55.0%
ACCTGCAACCCAGCTAACGA+TGG - chr8_2:67994873-67994892 None:intergenic 55.0%
GCTGGGTTGCAGGTGTGATA+TGG + chr8_2:67994879-67994898 Msa1264470:intron 55.0%
CCATCGCGCTTGCAGAAAAC+AGG - chr8_2:67995093-67995112 None:intergenic 55.0%
! CCTGTTTTCTGCAAGCGCGA+TGG + chr8_2:67995090-67995109 Msa1264470:CDS 55.0%
GTCATGCTTGCCATCGCCAA+GGG - chr8_2:67995389-67995408 None:intergenic 55.0%
AGTCATGCTTGCCATCGCCA+AGG - chr8_2:67995390-67995409 None:intergenic 55.0%
GAATGCCGACCCCACTTAGT+GGG - chr8_2:67995497-67995516 None:intergenic 55.0%
TGAATGCCGACCCCACTTAG+TGG - chr8_2:67995498-67995517 None:intergenic 55.0%
GTGATGCAGATTGGAGGCAG+CGG + chr8_2:67995623-67995642 Msa1264470:intron 55.0%
GAAAGGAGCTGACGCCATCT+AGG - chr8_2:67995692-67995711 None:intergenic 55.0%
GGCCAGCTCATTGGTGTAGA+TGG - chr8_2:67996063-67996082 None:intergenic 55.0%
CTCTTGTCTTCTGCTGCCGG+AGG - chr8_2:67991000-67991019 None:intergenic 60.0%
CGCAAGTAGAACCGCCGATC+AGG - chr8_2:67992637-67992656 None:intergenic 60.0%
CACCGTACTCCAAAGCCTCG+TGG - chr8_2:67992850-67992869 None:intergenic 60.0%
TTCGACTGCTGACGGAGCAC+TGG + chr8_2:67993255-67993274 Msa1264470:CDS 60.0%
GAGGGCTATGGGGCAGTTCA+CGG + chr8_2:67994702-67994721 Msa1264470:CDS 60.0%
ACTCCCTGACCTGTTGCCCT+TGG + chr8_2:67995370-67995389 Msa1264470:intron 60.0%
TCGCCAAGGGCAACAGGTCA+GGG - chr8_2:67995376-67995395 None:intergenic 60.0%
ATCGCCAAGGGCAACAGGTC+AGG - chr8_2:67995377-67995396 None:intergenic 60.0%
TGACCTGTTGCCCTTGGCGA+TGG + chr8_2:67995376-67995395 Msa1264470:intron 60.0%
TTGCCATCGCCAAGGGCAAC+AGG - chr8_2:67995382-67995401 None:intergenic 60.0%
!! GACTGCTGACGGAGCACTGG+AGG + chr8_2:67993258-67993277 Msa1264470:CDS 65.0%
! AGCACTGGAGGCAGCTCCTG+CGG + chr8_2:67993270-67993289 Msa1264470:CDS 65.0%
GCTGCTGCTGCTGCTGCAGG+AGG - chr8_2:67990867-67990886 None:intergenic 70.0%
GCTGCTGCTGCTGCTGCTGC+AGG - chr8_2:67990870-67990889 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 67990808 67996111 67990808 ID=Msa1264470;Name=Msa1264470
chr8_2 mRNA 67990808 67996111 67990808 ID=Msa1264470-mRNA-1;Parent=Msa1264470;Name=Msa1264470-mRNA-1;_AED=0.18;_eAED=0.18;_QI=68|1|1|1|0.81|0.66|12|364|375
chr8_2 exon 67990808 67990873 67990808 ID=Msa1264470-mRNA-1:exon:22454;Parent=Msa1264470-mRNA-1
chr8_2 exon 67990895 67991139 67990895 ID=Msa1264470-mRNA-1:exon:22455;Parent=Msa1264470-mRNA-1
chr8_2 exon 67991238 67991351 67991238 ID=Msa1264470-mRNA-1:exon:22456;Parent=Msa1264470-mRNA-1
chr8_2 exon 67992824 67992889 67992824 ID=Msa1264470-mRNA-1:exon:22457;Parent=Msa1264470-mRNA-1
chr8_2 exon 67992990 67993097 67992990 ID=Msa1264470-mRNA-1:exon:22458;Parent=Msa1264470-mRNA-1
chr8_2 exon 67993208 67993291 67993208 ID=Msa1264470-mRNA-1:exon:22459;Parent=Msa1264470-mRNA-1
chr8_2 exon 67994352 67994453 67994352 ID=Msa1264470-mRNA-1:exon:22460;Parent=Msa1264470-mRNA-1
chr8_2 exon 67994610 67994723 67994610 ID=Msa1264470-mRNA-1:exon:22461;Parent=Msa1264470-mRNA-1
chr8_2 exon 67994810 67994890 67994810 ID=Msa1264470-mRNA-1:exon:22462;Parent=Msa1264470-mRNA-1
chr8_2 exon 67995075 67995194 67995075 ID=Msa1264470-mRNA-1:exon:22463;Parent=Msa1264470-mRNA-1
chr8_2 exon 67995632 67995749 67995632 ID=Msa1264470-mRNA-1:exon:22464;Parent=Msa1264470-mRNA-1
chr8_2 exon 67995770 67996111 67995770 ID=Msa1264470-mRNA-1:exon:22465;Parent=Msa1264470-mRNA-1
chr8_2 five_prime_UTR 67990808 67990873 67990808 ID=Msa1264470-mRNA-1:five_prime_utr;Parent=Msa1264470-mRNA-1
chr8_2 five_prime_UTR 67990895 67990896 67990895 ID=Msa1264470-mRNA-1:five_prime_utr;Parent=Msa1264470-mRNA-1
chr8_2 CDS 67990897 67991139 67990897 ID=Msa1264470-mRNA-1:cds;Parent=Msa1264470-mRNA-1
chr8_2 CDS 67991238 67991351 67991238 ID=Msa1264470-mRNA-1:cds;Parent=Msa1264470-mRNA-1
chr8_2 CDS 67992824 67992889 67992824 ID=Msa1264470-mRNA-1:cds;Parent=Msa1264470-mRNA-1
chr8_2 CDS 67992990 67993097 67992990 ID=Msa1264470-mRNA-1:cds;Parent=Msa1264470-mRNA-1
chr8_2 CDS 67993208 67993291 67993208 ID=Msa1264470-mRNA-1:cds;Parent=Msa1264470-mRNA-1
chr8_2 CDS 67994352 67994453 67994352 ID=Msa1264470-mRNA-1:cds;Parent=Msa1264470-mRNA-1
chr8_2 CDS 67994610 67994723 67994610 ID=Msa1264470-mRNA-1:cds;Parent=Msa1264470-mRNA-1
chr8_2 CDS 67994810 67994890 67994810 ID=Msa1264470-mRNA-1:cds;Parent=Msa1264470-mRNA-1
chr8_2 CDS 67995075 67995194 67995075 ID=Msa1264470-mRNA-1:cds;Parent=Msa1264470-mRNA-1
chr8_2 CDS 67995632 67995727 67995632 ID=Msa1264470-mRNA-1:cds;Parent=Msa1264470-mRNA-1
chr8_2 three_prime_UTR 67995728 67995749 67995728 ID=Msa1264470-mRNA-1:three_prime_utr;Parent=Msa1264470-mRNA-1
chr8_2 three_prime_UTR 67995770 67996111 67995770 ID=Msa1264470-mRNA-1:three_prime_utr;Parent=Msa1264470-mRNA-1
Gene Sequence

>Msa1264470

ATGTTGACGATGATGAGCCAAATTCGTTTACCTCTCTATTGCTGCTACGCCTCAATCTCCTCCGAGACTCATCATCAAGTTCTTAATGACAACACAATCTCCTCCGGCAGCAGAAGACAAGAGATCCGTCTGGGTTTACCCAGTAAAGGTCGTATGTCTTCTGATACACTCGACCTTCTCAAGGATTGTCAATTGTCAGTCAAGCAGGTCAATCCACGTCAGTATGTTGCCCAAATTCCTCAGATTTCAAACTTGGAAGTCTGGTTCCAAAGACCCAAAGACATTGTTAGAAAATTGTTATCTGGAGATCTTGATCTTGGTATCGTCGGACTCGATATACTCACTGAATTTGGCCAGGGCAATGAAGATCTTATCGTTGTCCACGAGGCTTTGGAGTACGGTGATTGTCGTTTATCCATTGCGATTCCGCAATATGGAATATTTGAAAATGTAAATTCACTAGAGGAGCTAGCAAAAATGCCTCAATGGACAGAAGATAAGCCTCTGCGAGTTGCAACTGGATTCACCTATCTGGGTCCTAAATTTATGAAAGATAATGGTATTAAGCATGTGGCATTTTCGACTGCTGACGGAGCACTGGAGGCAGCTCCTGCGATGGGGATTGCTGATGCTATCTTGGACCTTGTAAGTAGTGGAACAACGTTGAAAGAAAATAACTTGAAGGAAATTGAAGGTGGAACTGTTTTGGAAAGTCAGGCTGCTCTTGTTGCAAGCAGGAAATCATTGATCGGACGAAAAGGAGTACTTGAAACAACTCATGAGATGCTTGAAAGATTAGAGGCACATCTGAGGGCTATGGGGCAGTTCACGGTTGTAGCAAACATGAGAGGAAGTAGTGCAGAGGAAGTGGCTGAGAGAGTACTGAGCCAACCATCGTTAGCTGGGTTGCAGGGACCCACAGTAAGTCCTGTTTTCTGCAAGCGCGATGGAAAGGTATCAGCAGACTACTATGCCATAGTCATATGTGTGCCCAAGAAGGCACTGTACAAGTCTATACAGCAACTGAGAGCGATTGGAGGCAGCGGAGTTCTTGTATCACCCTTGACCTATATTTTTGACGAGGAAACTCCTAGATGGCGTCAGCTCCTTTCTAAACTTGGGCTTTAG

Protein sequence

>Msa1264470

MLTMMSQIRLPLYCCYASISSETHHQVLNDNTISSGSRRQEIRLGLPSKGRMSSDTLDLLKDCQLSVKQVNPRQYVAQIPQISNLEVWFQRPKDIVRKLLSGDLDLGIVGLDILTEFGQGNEDLIVVHEALEYGDCRLSIAIPQYGIFENVNSLEELAKMPQWTEDKPLRVATGFTYLGPKFMKDNGIKHVAFSTADGALEAAPAMGIADAILDLVSSGTTLKENNLKEIEGGTVLESQAALVASRKSLIGRKGVLETTHEMLERLEAHLRAMGQFTVVANMRGSSAEEVAERVLSQPSLAGLQGPTVSPVFCKRDGKVSADYYAIVICVPKKALYKSIQQLRAIGGSGVLVSPLTYIFDEETPRWRQLLSKLGL*