Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1131440 | XP_003610300.1 | 96.552 | 377 | 7 | 2 | 1 | 375 | 1 | 373 | 0.0 | 744 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1131440 | sp|Q8GSJ1|HIS1B_ARATH | 81.894 | 359 | 64 | 1 | 18 | 375 | 55 | 413 | 0.0 | 612 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1131440 | G7JFL4 | 96.552 | 377 | 7 | 2 | 1 | 375 | 1 | 373 | 0.0 | 744 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0017940 | Msa1131440 | 0.801876 | 7.320942e-49 | -8.615850e-47 |
Msa0642650 | Msa1131440 | 0.800206 | 1.606830e-48 | -8.615850e-47 |
Msa0703760 | Msa1131440 | 0.805664 | 1.196731e-49 | -8.615850e-47 |
Msa0141830 | Msa1131440 | 0.801249 | 9.843711e-49 | -8.615850e-47 |
Msa0367370 | Msa1131440 | 0.803146 | 4.007428e-49 | -8.615850e-47 |
Msa1131440 | Msa1264470 | 0.923562 | 2.253989e-89 | -8.615850e-47 |
Msa0482990 | Msa1131440 | 0.910119 | 2.675072e-82 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1131440 | MtrunA17_Chr4g0073831 | 96.552 | 377 | 7 | 2 | 1 | 375 | 1 | 373 | 0.0 | 744 |
Msa1131440 | MtrunA17_Chr2g0277331 | 77.913 | 412 | 35 | 6 | 3 | 375 | 5 | 399 | 0.0 | 614 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1131440 | AT1G09795.1 | 81.894 | 359 | 64 | 1 | 18 | 375 | 55 | 413 | 0.0 | 612 |
Msa1131440 | AT1G58080.1 | 82.789 | 337 | 58 | 0 | 39 | 375 | 75 | 411 | 0.0 | 592 |
Find 116 sgRNAs with CRISPR-Local
Find 378 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTCTTGATACTAGATAATT+TGG | 0.099377 | 7_3:-83972794 | Msa1131440:three_prime_UTR |
ATTAATTAACCTGAGGAATT+TGG | 0.106128 | 7_3:+83977719 | None:intergenic |
TCATACATGTGTTCCATTTA+TGG | 0.107480 | 7_3:-83973015 | Msa1131440:three_prime_UTR |
CCATTATCTTTCATAAATTT+AGG | 0.185647 | 7_3:+83975529 | None:intergenic |
TAACAATGTCTTTGGGTCTT+TGG | 0.196414 | 7_3:+83977592 | None:intergenic |
TCTGCATTGATAACATCTTT+AGG | 0.240128 | 7_3:+83972944 | None:intergenic |
CTCGATATACTCACTGAATT+TGG | 0.245090 | 7_3:-83977528 | Msa1131440:CDS |
CTGCATTGATAACATCTTTA+GGG | 0.247183 | 7_3:+83972945 | None:intergenic |
AATTGAAGGTGGAACTGTTT+TGG | 0.258121 | 7_3:-83974320 | Msa1131440:CDS |
AGAAGACATACGACCTTTAC+TGG | 0.266634 | 7_3:+83977810 | None:intergenic |
AATAGAGAGGTAAACGAATT+TGG | 0.271491 | 7_3:+83977932 | None:intergenic |
TTGTTTCAGATTCCGCAATA+TGG | 0.287466 | 7_3:-83975762 | Msa1131440:intron |
CGTCAGCTCCTTTCTAAACT+TGG | 0.295403 | 7_3:-83973045 | Msa1131440:CDS |
TTAATTAACCTGAGGAATTT+GGG | 0.303133 | 7_3:+83977720 | None:intergenic |
CCTAAATTTATGAAAGATAA+TGG | 0.327102 | 7_3:-83975529 | Msa1131440:CDS |
ATTGTTAGAAAATTGTTATC+TGG | 0.350355 | 7_3:-83977576 | Msa1131440:CDS |
AGACTTGTACAGTGCCTTCT+TGG | 0.359607 | 7_3:+83973589 | None:intergenic |
TATCGTTGTCCACGAGGCTT+TGG | 0.367464 | 7_3:-83975905 | Msa1131440:CDS |
CTCTTGATACTAGATAATTT+GGG | 0.374851 | 7_3:-83972793 | Msa1131440:three_prime_UTR |
AGATTTCAAACTTGGAAGTC+TGG | 0.377840 | 7_3:-83977617 | Msa1131440:CDS |
TTATCTGGAGATCTTGATCT+TGG | 0.378632 | 7_3:-83977561 | Msa1131440:CDS |
CCATCGCGCTTGCAGAAAAC+AGG | 0.381923 | 7_3:+83973653 | None:intergenic |
CTTGGGCACACATATGACTA+TGG | 0.388474 | 7_3:+83973607 | None:intergenic |
AAGCCTCTGCGAGTTGCAAC+TGG | 0.392840 | 7_3:-83975678 | Msa1131440:CDS |
TGAGATGCTTGAAAGATTAG+AGG | 0.394252 | 7_3:-83974071 | Msa1131440:CDS |
TACACTGCAGATTTCAAACT+TGG | 0.415322 | 7_3:-83977625 | Msa1131440:intron |
ACCATCGTTAGCTGGGTTGC+AGG | 0.420563 | 7_3:-83973874 | Msa1131440:intron |
GGGGATTGCTGATGCTATCT+TGG | 0.420913 | 7_3:-83974389 | Msa1131440:CDS |
TGAGACACCCCGGTTTGGTT+GGG | 0.423002 | 7_3:+83978032 | None:intergenic |
CTGAGCCAACCATCGTTAGC+TGG | 0.423235 | 7_3:-83973882 | Msa1131440:CDS |
AATTAAAGACCCAACCAAAC+CGG | 0.424516 | 7_3:-83978041 | Msa1131440:five_prime_UTR |
GACTTGTACAGTGCCTTCTT+GGG | 0.445015 | 7_3:+83973590 | None:intergenic |
GTCAGCTCCTTTCTAAACTT+GGG | 0.445359 | 7_3:-83973044 | Msa1131440:CDS |
CTTCATTTGTTGCTCGATAA+CGG | 0.446176 | 7_3:-83972896 | Msa1131440:three_prime_UTR |
TTGAGACACCCCGGTTTGGT+TGG | 0.457570 | 7_3:+83978031 | None:intergenic |
GTTGAAAGAAAATAACTTGA+AGG | 0.459040 | 7_3:-83974344 | Msa1131440:CDS |
GAGGGCTATGGGGCAGTTCA+CGG | 0.460141 | 7_3:-83974041 | Msa1131440:intron |
AGAGGCACATCTGAGGGCTA+TGG | 0.460886 | 7_3:-83974053 | Msa1131440:CDS |
TTCGACTGCTGACGGAGCAC+TGG | 0.466865 | 7_3:-83975488 | Msa1131440:CDS |
GTCCACGAGGCTTTGGAGTA+CGG | 0.469178 | 7_3:-83975898 | Msa1131440:CDS |
GATCTCTTGTCTTCTGCTGC+CGG | 0.470766 | 7_3:+83977846 | None:intergenic |
AGGAAGTAGTGCAGAGGAAG+TGG | 0.471067 | 7_3:-83973916 | Msa1131440:CDS |
AATTGAAGAAAAGAAACTAT+AGG | 0.475203 | 7_3:+83972822 | None:intergenic |
TTGACGAGGAAACTCCTAGA+TGG | 0.477208 | 7_3:-83973068 | Msa1131440:CDS |
TCGATTGAGACACCCCGGTT+TGG | 0.482709 | 7_3:+83978027 | None:intergenic |
TTGTTGTGGGAGTTAAAGTA+TGG | 0.483141 | 7_3:-83972741 | Msa1131440:three_prime_UTR |
AGGCTGCTCTTGTTGCAAGC+AGG | 0.487061 | 7_3:-83974135 | Msa1131440:CDS |
ACGTTGTTCCACTACTTACA+AGG | 0.492916 | 7_3:+83974365 | None:intergenic |
TTTAACTTCAACAATTGTTG+TGG | 0.494697 | 7_3:-83972755 | Msa1131440:three_prime_UTR |
TTGTCAATTGTCAGTCAAGC+AGG | 0.495907 | 7_3:-83977764 | Msa1131440:CDS |
TTAACTTCAACAATTGTTGT+GGG | 0.502935 | 7_3:-83972754 | Msa1131440:three_prime_UTR |
GAGGCACATCTGAGGGCTAT+GGG | 0.505249 | 7_3:-83974052 | Msa1131440:CDS |
AAATCATTGATCGGACGAAA+AGG | 0.506065 | 7_3:-83974112 | Msa1131440:CDS |
GAAAGGAGCTGACGCCATCT+AGG | 0.514685 | 7_3:+83973054 | None:intergenic |
ATTAAAGACCCAACCAAACC+GGG | 0.517060 | 7_3:-83978040 | Msa1131440:five_prime_UTR |
AGGAGGAACGACGCTGATGA+TGG | 0.517427 | 7_3:+83977978 | None:intergenic |
ATGAGTCTCGGAGGAGATTG+AGG | 0.524502 | 7_3:+83977900 | None:intergenic |
CAGAAGACAAGAGATCCGTC+TGG | 0.525828 | 7_3:-83977839 | Msa1131440:CDS |
GTATGTTGCCCAAATTCCTC+AGG | 0.527688 | 7_3:-83977728 | Msa1131440:intron |
ATCATCGTCAACATTGCTGC+AGG | 0.528756 | 7_3:+83977958 | None:intergenic |
ATACTAGATAATTTGGGATG+CGG | 0.531826 | 7_3:-83972787 | Msa1131440:three_prime_UTR |
ACTAAAGCCCAAGTTTAGAA+AGG | 0.532749 | 7_3:+83973037 | None:intergenic |
TGATAACATCTTTAGGGAGA+GGG | 0.534427 | 7_3:+83972951 | None:intergenic |
AATAACTTGAAGGAAATTGA+AGG | 0.546732 | 7_3:-83974334 | Msa1131440:CDS |
TTGATAACATCTTTAGGGAG+AGG | 0.551055 | 7_3:+83972950 | None:intergenic |
TGATACACTCGACCTTCTCA+AGG | 0.552104 | 7_3:-83977788 | Msa1131440:CDS |
GGCTTATCTTCTGTCCATTG+AGG | 0.552577 | 7_3:+83975696 | None:intergenic |
ATCTTGGACCTTGTAAGTAG+TGG | 0.552901 | 7_3:-83974373 | Msa1131440:CDS |
GATCTTGATCTTGGTATCGT+CGG | 0.554851 | 7_3:-83977552 | Msa1131440:CDS |
TGAGCCAACCATCGTTAGCT+GGG | 0.555529 | 7_3:-83973881 | Msa1131440:CDS |
GACTGCTGACGGAGCACTGG+AGG | 0.563946 | 7_3:-83975485 | Msa1131440:CDS |
CATACAAACTGATGCAGAGG+TGG | 0.567776 | 7_3:+83972864 | None:intergenic |
AGTCATATGTGTGCCCAAGA+AGG | 0.572168 | 7_3:-83973603 | Msa1131440:CDS |
TATACTCACTGAATTTGGCC+AGG | 0.572345 | 7_3:-83977523 | Msa1131440:intron |
AATGACAACACAATCTCCTC+CGG | 0.573673 | 7_3:-83977865 | Msa1131440:CDS |
AGCACTGGAGGCAGCTCCTG+CGG | 0.577767 | 7_3:-83975473 | Msa1131440:intron |
ATTCATGTGATGCAGATTGG+AGG | 0.578035 | 7_3:-83973126 | Msa1131440:intron |
GCAACCCAGCTAACGATGGT+TGG | 0.580333 | 7_3:+83973877 | None:intergenic |
CGTCTGGGTTTACCCAGTAA+AGG | 0.581574 | 7_3:-83977823 | Msa1131440:CDS |
TGAAAATGTAAATTCACTAG+AGG | 0.584392 | 7_3:-83975733 | Msa1131440:CDS |
TTTCTGCAAGCGCGATGGAA+AGG | 0.585463 | 7_3:-83973648 | Msa1131440:CDS |
CTCTTGTCTTCTGCTGCCGG+AGG | 0.586047 | 7_3:+83977849 | None:intergenic |
AAGATTAGAGGCACATCTGA+GGG | 0.596395 | 7_3:-83974059 | Msa1131440:CDS |
GTGATGCAGATTGGAGGCAG+CGG | 0.598542 | 7_3:-83973120 | Msa1131440:intron |
GTAATTTCAACTCACCGCAA+TGG | 0.599912 | 7_3:+83975861 | None:intergenic |
GTCTATACAGCAACTGAGAG+CGG | 0.600820 | 7_3:-83973570 | Msa1131440:intron |
AAGAACTTGATGATGAGTCT+CGG | 0.602026 | 7_3:+83977888 | None:intergenic |
GATAACATCTTTAGGGAGAG+GGG | 0.611885 | 7_3:+83972952 | None:intergenic |
GCAAGCAGGAAATCATTGAT+CGG | 0.612487 | 7_3:-83974121 | Msa1131440:CDS |
ATCGTCAACATTGCTGCAGG+AGG | 0.616930 | 7_3:+83977961 | None:intergenic |
AAAGATTAGAGGCACATCTG+AGG | 0.618033 | 7_3:-83974060 | Msa1131440:CDS |
GAAGACATACGACCTTTACT+GGG | 0.626259 | 7_3:+83977811 | None:intergenic |
AGAAGACAAGAGATCCGTCT+GGG | 0.626407 | 7_3:-83977838 | Msa1131440:CDS |
ACAATTGACAATCCTTGAGA+AGG | 0.631059 | 7_3:+83977776 | None:intergenic |
TGATTGTCGTTTATCCATTG+CGG | 0.633490 | 7_3:-83975875 | Msa1131440:intron |
AGATAATGGTATTAAGCATG+TGG | 0.634797 | 7_3:-83975515 | Msa1131440:CDS |
CAACATACAAACTGATGCAG+AGG | 0.635116 | 7_3:+83972861 | None:intergenic |
GAGGCGTAGCAGCAATAGAG+AGG | 0.638994 | 7_3:+83977919 | None:intergenic |
CAGAAAACAGGACTTACTGT+GGG | 0.647329 | 7_3:+83973665 | None:intergenic |
CAGGTTGTAGCAAACATGAG+AGG | 0.648123 | 7_3:-83973936 | Msa1131440:CDS |
AACTTGAAGGAAATTGAAGG+TGG | 0.649831 | 7_3:-83974331 | Msa1131440:CDS |
GCAGAAAACAGGACTTACTG+TGG | 0.653659 | 7_3:+83973664 | None:intergenic |
AATCCAGTTGCAACTCGCAG+AGG | 0.653851 | 7_3:+83975675 | None:intergenic |
AGTGTTCGATTGAGACACCC+CGG | 0.654360 | 7_3:+83978022 | None:intergenic |
CATGAGAGGAAGTAGTGCAG+AGG | 0.654817 | 7_3:-83973922 | Msa1131440:CDS |
ATACAAACTGATGCAGAGGT+GGG | 0.659693 | 7_3:+83972865 | None:intergenic |
AGGCACATCTGAGGGCTATG+GGG | 0.661787 | 7_3:-83974051 | Msa1131440:CDS |
AGATCTTATCGTTGTCCACG+AGG | 0.663229 | 7_3:-83975911 | Msa1131440:CDS |
ACCTGCAACCCAGCTAACGA+TGG | 0.667474 | 7_3:+83973873 | None:intergenic |
CACCGTACTCCAAAGCCTCG+TGG | 0.672065 | 7_3:+83975896 | None:intergenic |
CTTTACTGGGTAAACCCAGA+CGG | 0.678884 | 7_3:+83977824 | None:intergenic |
ATTTGGGCAACATACTGACG+TGG | 0.682664 | 7_3:+83977736 | None:intergenic |
GATGGCGAAGCTAAAGTCTG+TGG | 0.688485 | 7_3:+83977996 | None:intergenic |
AACTTGATGATGAGTCTCGG+AGG | 0.694599 | 7_3:+83977891 | None:intergenic |
CATTTGTTGCTCGATAACGG+AGG | 0.710681 | 7_3:-83972893 | Msa1131440:three_prime_UTR |
TTAAAGACCCAACCAAACCG+GGG | 0.720593 | 7_3:-83978039 | Msa1131440:five_prime_UTR |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTAATTTAAATATATATT+TGG | + | chr7_3:83972702-83972721 | None:intergenic | 0.0% |
!! | ATTATCTAAATGAATAAAAA+AGG | + | chr7_3:83976334-83976353 | None:intergenic | 10.0% |
!! | TTATTATTATAATGAAGAGA+AGG | + | chr7_3:83973088-83973107 | None:intergenic | 15.0% |
!!! | ATTTCTTTATTATCTTTTCT+CGG | - | chr7_3:83973279-83973298 | Msa1131440:intron | 15.0% |
!!! | TTTTATATGTTTCAATGTAT+GGG | - | chr7_3:83973319-83973338 | Msa1131440:intron | 15.0% |
!! | AAAAAACAATCACATTAATT+GGG | + | chr7_3:83973376-83973395 | None:intergenic | 15.0% |
!! | AAAAAAACAATCACATTAAT+TGG | + | chr7_3:83973377-83973396 | None:intergenic | 15.0% |
!! | AAAAAACAATCACATTAATT+GGG | + | chr7_3:83973376-83973395 | None:intergenic | 15.0% |
!!! | TGTTTGAATTTTAAATTTAG+CGG | + | chr7_3:83974371-83974390 | None:intergenic | 15.0% |
!! | ATGTTAATTGTACTAAATAT+AGG | + | chr7_3:83974401-83974420 | None:intergenic | 15.0% |
!! | TTAAATCAAATGATAGTTAT+TGG | - | chr7_3:83975412-83975431 | Msa1131440:intron | 15.0% |
!! | TAAATCAAATGATAGTTATT+GGG | - | chr7_3:83975413-83975432 | Msa1131440:intron | 15.0% |
!! | ATATTATCTTCAAATTTCAT+AGG | - | chr7_3:83975576-83975595 | Msa1131440:intron | 15.0% |
!! | GATAAAAAATATTGAGAAAA+AGG | + | chr7_3:83976224-83976243 | None:intergenic | 15.0% |
!!! | AATTTTCTAACAATGTCTTT+GGG | + | chr7_3:83973185-83973204 | None:intergenic | 20.0% |
!! | ATTGTTAGAAAATTGTTATC+TGG | - | chr7_3:83973191-83973210 | Msa1131440:intron | 20.0% |
!!! | CTTTTATATGTTTCAATGTA+TGG | - | chr7_3:83973318-83973337 | Msa1131440:intron | 20.0% |
!! | GAAAAAACAATCACATTAAT+TGG | + | chr7_3:83973470-83973489 | None:intergenic | 20.0% |
!!! | ATTAATGTGATTGTTTTTTC+CGG | - | chr7_3:83973470-83973489 | Msa1131440:intron | 20.0% |
!!! | GATAAATTCTAAGAAATAGA+AGG | + | chr7_3:83973704-83973723 | None:intergenic | 20.0% |
!!! | TTAATATTTCTATGCTTACT+TGG | + | chr7_3:83973972-83973991 | None:intergenic | 20.0% |
!!! | AATCGTTTTCTATAGAAAAA+AGG | - | chr7_3:83974237-83974256 | Msa1131440:intron | 20.0% |
!!! | GTTTGAATTTTAAATTTAGC+GGG | + | chr7_3:83974370-83974389 | None:intergenic | 20.0% |
!!! | GATAAAAATATTGATTCTCA+TGG | + | chr7_3:83974805-83974824 | None:intergenic | 20.0% |
!! | TATAACAATTATCCTTTATC+AGG | - | chr7_3:83974826-83974845 | Msa1131440:intron | 20.0% |
!! | ATAACAATTATCCTTTATCA+GGG | - | chr7_3:83974827-83974846 | Msa1131440:intron | 20.0% |
!!! | TTTTCAAATATTCCATATTG+CGG | + | chr7_3:83975020-83975039 | None:intergenic | 20.0% |
!! | CCATTATCTTTCATAAATTT+AGG | + | chr7_3:83975241-83975260 | None:intergenic | 20.0% |
!! | CCTAAATTTATGAAAGATAA+TGG | - | chr7_3:83975238-83975257 | Msa1131440:intron | 20.0% |
!! | AGTCAAGAATTATAAATTGT+AGG | - | chr7_3:83975688-83975707 | Msa1131440:CDS | 20.0% |
!! | TGAAAGATATAATAAGCTTT+AGG | - | chr7_3:83975747-83975766 | Msa1131440:CDS | 20.0% |
!! | CTGATCTAATTATAAATTTC+TGG | - | chr7_3:83975901-83975920 | Msa1131440:CDS | 20.0% |
!!! | TTTTGCTTATCATATTCATA+TGG | - | chr7_3:83977458-83977477 | Msa1131440:intron | 20.0% |
!! | TGTAAAAAAAACTCCATAAA+TGG | + | chr7_3:83977768-83977787 | None:intergenic | 20.0% |
!! | AATTGAAGAAAAGAAACTAT+AGG | + | chr7_3:83977948-83977967 | None:intergenic | 20.0% |
! | TTAATTAACCTGAGGAATTT+GGG | + | chr7_3:83973050-83973069 | None:intergenic | 25.0% |
! | ATTAATTAACCTGAGGAATT+TGG | + | chr7_3:83973051-83973070 | None:intergenic | 25.0% |
! | GTAAGTAATTAATTAACCTG+AGG | + | chr7_3:83973058-83973077 | None:intergenic | 25.0% |
!! | CAATTTTCTAACAATGTCTT+TGG | + | chr7_3:83973186-83973205 | None:intergenic | 25.0% |
! | GCAAATGATACAAAATTACT+AGG | - | chr7_3:83973516-83973535 | Msa1131440:intron | 25.0% |
! | TGATACAAAATTACTAGGAA+AGG | - | chr7_3:83973521-83973540 | Msa1131440:intron | 25.0% |
! | GATACAAAATTACTAGGAAA+GGG | - | chr7_3:83973522-83973541 | Msa1131440:intron | 25.0% |
! | AAGAAATAGAAGGTTAAAAG+AGG | + | chr7_3:83973694-83973713 | None:intergenic | 25.0% |
!!! | TTTTAACTGTGCTTAAATTG+GGG | + | chr7_3:83973755-83973774 | None:intergenic | 25.0% |
!!! | CTTTTAACTGTGCTTAAATT+GGG | + | chr7_3:83973756-83973775 | None:intergenic | 25.0% |
! | AACATTCCTAAAAATATGCA+GGG | + | chr7_3:83973779-83973798 | None:intergenic | 25.0% |
!!! | TATTTTTAGGAATGTTCACT+TGG | - | chr7_3:83973783-83973802 | Msa1131440:intron | 25.0% |
! | AATTCCAAAACCAAAATTTG+TGG | + | chr7_3:83973896-83973915 | None:intergenic | 25.0% |
! | AAATTCTTTCAAATTTCGGA+GGG | + | chr7_3:83973924-83973943 | None:intergenic | 25.0% |
! | CCACAAATTCTTTCAAATTT+CGG | + | chr7_3:83973928-83973947 | None:intergenic | 25.0% |
! | TGAAAATGTAAATTCACTAG+AGG | - | chr7_3:83975034-83975053 | Msa1131440:intron | 25.0% |
! | TAAATGTGAATCACATACAT+AGG | + | chr7_3:83975120-83975139 | None:intergenic | 25.0% |
!!! | ATGTTTTGAAGTTTTATCTG+TGG | - | chr7_3:83975144-83975163 | Msa1131440:intron | 25.0% |
!! | TTTAGAATCTGAAAACATAC+AGG | + | chr7_3:83975353-83975372 | None:intergenic | 25.0% |
! | AAATGATAGTTATTGGGATT+TGG | - | chr7_3:83975419-83975438 | Msa1131440:intron | 25.0% |
! | ATAGCTTAATACACTAATCA+TGG | - | chr7_3:83975488-83975507 | Msa1131440:CDS | 25.0% |
!!! | CATGGTTATCTTTGATTTTT+GGG | + | chr7_3:83975532-83975551 | None:intergenic | 25.0% |
! | TCAAACAATGCTACTAAAAT+CGG | + | chr7_3:83975850-83975869 | None:intergenic | 25.0% |
! | AGCATTGTTTGAGTAAATTA+AGG | - | chr7_3:83975858-83975877 | Msa1131440:intron | 25.0% |
! | AAACAGGGAAATATCTTATA+CGG | + | chr7_3:83976200-83976219 | None:intergenic | 25.0% |
! | TATTGAGAAAAAGGTAAACA+GGG | + | chr7_3:83976215-83976234 | None:intergenic | 25.0% |
! | ATATTGAGAAAAAGGTAAAC+AGG | + | chr7_3:83976216-83976235 | None:intergenic | 25.0% |
!! | TTGTCTTTTCTCTATTTAGA+TGG | - | chr7_3:83976357-83976376 | Msa1131440:intron | 25.0% |
!! | TGTCTTTTCTCTATTTAGAT+GGG | - | chr7_3:83976358-83976377 | Msa1131440:intron | 25.0% |
! | GTTGAAAGAAAATAACTTGA+AGG | - | chr7_3:83976423-83976442 | Msa1131440:intron | 25.0% |
! | AATAACTTGAAGGAAATTGA+AGG | - | chr7_3:83976433-83976452 | Msa1131440:intron | 25.0% |
!!! | TGATCTGCTGTTTTTTTAAA+AGG | - | chr7_3:83976514-83976533 | Msa1131440:intron | 25.0% |
! | TAGGAAAAAGAAATTAGACA+CGG | - | chr7_3:83977304-83977323 | Msa1131440:intron | 25.0% |
! | TATGATAAGCAAAAATTGAG+AGG | + | chr7_3:83977452-83977471 | None:intergenic | 25.0% |
!!! | ATTCTCATACCTATTTCTTT+TGG | - | chr7_3:83977614-83977633 | Msa1131440:CDS | 25.0% |
!!! | GGAGTTTTTTTTACAGTATA+TGG | - | chr7_3:83977773-83977792 | Msa1131440:CDS | 25.0% |
! | TCTCTTGATACTAGATAATT+TGG | - | chr7_3:83977973-83977992 | Msa1131440:five_prime_UTR | 25.0% |
! | CTCTTGATACTAGATAATTT+GGG | - | chr7_3:83977974-83977993 | Msa1131440:five_prime_UTR | 25.0% |
!! | TTTAACTTCAACAATTGTTG+TGG | - | chr7_3:83978012-83978031 | Msa1131440:five_prime_UTR | 25.0% |
! | TTAACTTCAACAATTGTTGT+GGG | - | chr7_3:83978013-83978032 | Msa1131440:five_prime_UTR | 25.0% |
AATAGAGAGGTAAACGAATT+TGG | + | chr7_3:83972838-83972857 | None:intergenic | 30.0% | |
ATTATAATGAAGAGAAGGTG+AGG | + | chr7_3:83973083-83973102 | None:intergenic | 30.0% | |
AGAAATTAATTAAGCAGACC+TGG | + | chr7_3:83973265-83973284 | None:intergenic | 30.0% | |
TGCTTCTCTGAATAAATTGA+AGG | + | chr7_3:83973603-83973622 | None:intergenic | 30.0% | |
!! | GAAATGAAGCTATTTCTACT+AGG | + | chr7_3:83973732-83973751 | None:intergenic | 30.0% |
TTTAACTGTGCTTAAATTGG+GGG | + | chr7_3:83973754-83973773 | None:intergenic | 30.0% | |
!! | GCTTTTAACTGTGCTTAAAT+TGG | + | chr7_3:83973757-83973776 | None:intergenic | 30.0% |
! | TAAAAGCCCTGCATATTTTT+AGG | - | chr7_3:83973770-83973789 | Msa1131440:intron | 30.0% |
GAACATTCCTAAAAATATGC+AGG | + | chr7_3:83973780-83973799 | None:intergenic | 30.0% | |
AATTCTTTCAAATTTCGGAG+GGG | + | chr7_3:83973923-83973942 | None:intergenic | 30.0% | |
CAAATTCTTTCAAATTTCGG+AGG | + | chr7_3:83973925-83973944 | None:intergenic | 30.0% | |
CCGAAATTTGAAAGAATTTG+TGG | - | chr7_3:83973925-83973944 | Msa1131440:CDS | 30.0% | |
TTCAGATATTTGGTATTGCA+GGG | + | chr7_3:83974056-83974075 | None:intergenic | 30.0% | |
ATTCAGATATTTGGTATTGC+AGG | + | chr7_3:83974057-83974076 | None:intergenic | 30.0% | |
AGAATAAACCACCTTGAAAT+TGG | - | chr7_3:83974109-83974128 | Msa1131440:CDS | 30.0% | |
GAATAAACCACCTTGAAATT+GGG | - | chr7_3:83974110-83974129 | Msa1131440:CDS | 30.0% | |
AAAAAAGGAATAGCATATCC+CGG | - | chr7_3:83974252-83974271 | Msa1131440:intron | 30.0% | |
!!! | TGCAGTTAGTTTTATTCCTT+AGG | + | chr7_3:83974285-83974304 | None:intergenic | 30.0% |
AAGTTGGCATAATGGTTAAT+AGG | + | chr7_3:83974322-83974341 | None:intergenic | 30.0% | |
!! | TTCTTTGAAACATCTATCTC+TGG | - | chr7_3:83974576-83974595 | Msa1131440:intron | 30.0% |
CACAAAACAATGAAATCGAT+AGG | + | chr7_3:83974959-83974978 | None:intergenic | 30.0% | |
! | AGATAATGGTATTAAGCATG+TGG | - | chr7_3:83975252-83975271 | Msa1131440:intron | 30.0% |
!! | CCATGGTTATCTTTGATTTT+TGG | + | chr7_3:83975533-83975552 | None:intergenic | 30.0% |
CCAAAAATCAAAGATAACCA+TGG | - | chr7_3:83975530-83975549 | Msa1131440:CDS | 30.0% | |
CAAACAATGCTACTAAAATC+GGG | + | chr7_3:83975849-83975868 | None:intergenic | 30.0% | |
ATCAGACTTCTCAATTCAAT+GGG | + | chr7_3:83975886-83975905 | None:intergenic | 30.0% | |
!!! | TTTTTTGTGTGAAGAAGTTC+TGG | - | chr7_3:83975958-83975977 | Msa1131440:intron | 30.0% |
!!! | CTCTTTTTTTCTGGTTTATG+TGG | - | chr7_3:83975996-83976015 | Msa1131440:intron | 30.0% |
!!! | TTTTTTTCTGGTTTATGTGG+AGG | - | chr7_3:83975999-83976018 | Msa1131440:intron | 30.0% |
!!! | TTTTTTCTGGTTTATGTGGA+GGG | - | chr7_3:83976000-83976019 | Msa1131440:intron | 30.0% |
GAAATATCTTATACGGAAAG+AGG | + | chr7_3:83976193-83976212 | None:intergenic | 30.0% | |
! | GTCTTTTCTCTATTTAGATG+GGG | - | chr7_3:83976359-83976378 | Msa1131440:intron | 30.0% |
! | CTGATAATTGAACACTTTTC+AGG | - | chr7_3:83976612-83976631 | Msa1131440:intron | 30.0% |
! | CCATTTTCTAATGCTAAATC+CGG | - | chr7_3:83976808-83976827 | Msa1131440:intron | 30.0% |
TTTCTATAAGCATGTGAAGA+TGG | - | chr7_3:83977259-83977278 | Msa1131440:intron | 30.0% | |
AGGAAAAAGAAATTAGACAC+GGG | - | chr7_3:83977305-83977324 | Msa1131440:intron | 30.0% | |
AAATCAAGAATCCATACAAC+TGG | + | chr7_3:83977358-83977377 | None:intergenic | 30.0% | |
CAAGCATGACTATAAGTTAT+TGG | - | chr7_3:83977423-83977442 | Msa1131440:intron | 30.0% | |
TGAATGTAGCCAAAAGAAAT+AGG | + | chr7_3:83977626-83977645 | None:intergenic | 30.0% | |
TCGTCAAAAATATAGGTCAA+GGG | + | chr7_3:83977686-83977705 | None:intergenic | 30.0% | |
AGTTTCCTCGTCAAAAATAT+AGG | + | chr7_3:83977693-83977712 | None:intergenic | 30.0% | |
TCATACATGTGTTCCATTTA+TGG | - | chr7_3:83977752-83977771 | Msa1131440:CDS | 30.0% | |
! | CTGCATTGATAACATCTTTA+GGG | + | chr7_3:83977825-83977844 | None:intergenic | 30.0% |
! | TCTGCATTGATAACATCTTT+AGG | + | chr7_3:83977826-83977845 | None:intergenic | 30.0% |
! | ATACTAGATAATTTGGGATG+CGG | - | chr7_3:83977980-83977999 | Msa1131440:five_prime_UTR | 30.0% |
AATTAAAGACCCAACCAAAC+CGG | - | chr7_3:83972726-83972745 | Msa1131440:three_prime_UTR | 35.0% | |
!! | AAGAACTTGATGATGAGTCT+CGG | + | chr7_3:83972882-83972901 | None:intergenic | 35.0% |
ACAATTGACAATCCTTGAGA+AGG | + | chr7_3:83972994-83973013 | None:intergenic | 35.0% | |
TACACTGCAGATTTCAAACT+TGG | - | chr7_3:83973142-83973161 | Msa1131440:intron | 35.0% | |
AGATTTCAAACTTGGAAGTC+TGG | - | chr7_3:83973150-83973169 | Msa1131440:intron | 35.0% | |
TAACAATGTCTTTGGGTCTT+TGG | + | chr7_3:83973178-83973197 | None:intergenic | 35.0% | |
TTATCTGGAGATCTTGATCT+TGG | - | chr7_3:83973206-83973225 | Msa1131440:intron | 35.0% | |
CTCGATATACTCACTGAATT+TGG | - | chr7_3:83973239-83973258 | Msa1131440:intron | 35.0% | |
! | CAATGTATGGGTTAATGAGA+AGG | - | chr7_3:83973331-83973350 | Msa1131440:intron | 35.0% |
CAAAAAAGACTGCGAAGAAA+CGG | + | chr7_3:83973645-83973664 | None:intergenic | 35.0% | |
ATATGATACCACTGCTAATG+TGG | + | chr7_3:83973671-83973690 | None:intergenic | 35.0% | |
! | GATGGTGAAGCAATTTTCAT+CGG | - | chr7_3:83973854-83973873 | Msa1131440:intron | 35.0% |
! | CAACTAGAGTCCACAAATTT+TGG | - | chr7_3:83973883-83973902 | Msa1131440:CDS | 35.0% |
!!! | GAGTCCACAAATTTTGGTTT+TGG | - | chr7_3:83973889-83973908 | Msa1131440:CDS | 35.0% |
ATTCTTTCAAATTTCGGAGG+GGG | + | chr7_3:83973922-83973941 | None:intergenic | 35.0% | |
TATGCTTACTTGGTATTGCA+GGG | + | chr7_3:83974009-83974028 | None:intergenic | 35.0% | |
GTGAGGCAAATTCAGATATT+TGG | + | chr7_3:83974066-83974085 | None:intergenic | 35.0% | |
TGTGAATAGTCACTACTTAC+TGG | + | chr7_3:83974456-83974475 | None:intergenic | 35.0% | |
AGGGCATACAAAAAAGATTG+TGG | + | chr7_3:83974720-83974739 | None:intergenic | 35.0% | |
AAAGCAAAGTTGCATGATCA+GGG | + | chr7_3:83974739-83974758 | None:intergenic | 35.0% | |
AAAAGCAAAGTTGCATGATC+AGG | + | chr7_3:83974740-83974759 | None:intergenic | 35.0% | |
CAATTGCAGAACAATGTTCT+GGG | - | chr7_3:83974775-83974794 | Msa1131440:intron | 35.0% | |
! | TGATTGTCGTTTATCCATTG+CGG | - | chr7_3:83974892-83974911 | Msa1131440:intron | 35.0% |
TTGTTTCAGATTCCGCAATA+TGG | - | chr7_3:83975005-83975024 | Msa1131440:intron | 35.0% | |
GATAGTTATTGGGATTTGGA+AGG | - | chr7_3:83975423-83975442 | Msa1131440:intron | 35.0% | |
GAAGATACATTCTACCTTGT+TGG | - | chr7_3:83975609-83975628 | Msa1131440:intron | 35.0% | |
! | CTACCTTGTTGGTTAATTTG+TGG | - | chr7_3:83975620-83975639 | Msa1131440:intron | 35.0% |
TAGCCACAAATTAACCAACA+AGG | + | chr7_3:83975626-83975645 | None:intergenic | 35.0% | |
! | TCCCATCTATATTTTCTCAC+CGG | - | chr7_3:83975783-83975802 | Msa1131440:intron | 35.0% |
TCCGGTGAGAAAATATAGAT+GGG | + | chr7_3:83975787-83975806 | None:intergenic | 35.0% | |
TTCCGGTGAGAAAATATAGA+TGG | + | chr7_3:83975788-83975807 | None:intergenic | 35.0% | |
TCAGACTTCTCAATTCAATG+GGG | + | chr7_3:83975885-83975904 | None:intergenic | 35.0% | |
GATCAGACTTCTCAATTCAA+TGG | + | chr7_3:83975887-83975906 | None:intergenic | 35.0% | |
!!! | TTTTTCTGGTTTATGTGGAG+GGG | - | chr7_3:83976001-83976020 | Msa1131440:intron | 35.0% |
! | TTGAGTCTGTGTTTTACGAT+TGG | - | chr7_3:83976038-83976057 | Msa1131440:intron | 35.0% |
! | TGAGTCTGTGTTTTACGATT+GGG | - | chr7_3:83976039-83976058 | Msa1131440:intron | 35.0% |
AAAAGGTCAACTCCAACATA+TGG | + | chr7_3:83976317-83976336 | None:intergenic | 35.0% | |
AACTTGAAGGAAATTGAAGG+TGG | - | chr7_3:83976436-83976455 | Msa1131440:intron | 35.0% | |
! | AATTGAAGGTGGAACTGTTT+TGG | - | chr7_3:83976447-83976466 | Msa1131440:intron | 35.0% |
!!! | TAAGCATACCTTGTCGTTTT+TGG | - | chr7_3:83976582-83976601 | Msa1131440:intron | 35.0% |
AAATCATTGATCGGACGAAA+AGG | - | chr7_3:83976655-83976674 | Msa1131440:intron | 35.0% | |
TGAGATGCTTGAAAGATTAG+AGG | - | chr7_3:83976696-83976715 | Msa1131440:intron | 35.0% | |
ACAAAGAGAGAGGAAAAAAC+TGG | + | chr7_3:83976787-83976806 | None:intergenic | 35.0% | |
AGAAAATGGAACAAAGAGAG+AGG | + | chr7_3:83976797-83976816 | None:intergenic | 35.0% | |
CCGGATTTAGCATTAGAAAA+TGG | + | chr7_3:83976811-83976830 | None:intergenic | 35.0% | |
CCTAAAATGAATTAGGGTTG+GGG | + | chr7_3:83976942-83976961 | None:intergenic | 35.0% | |
CCCTAAAATGAATTAGGGTT+GGG | + | chr7_3:83976943-83976962 | None:intergenic | 35.0% | |
! | CCCAACCCTAATTCATTTTA+GGG | - | chr7_3:83976940-83976959 | Msa1131440:intron | 35.0% |
! | CCAACCCTAATTCATTTTAG+GGG | - | chr7_3:83976941-83976960 | Msa1131440:intron | 35.0% |
TCCTCCCCTAAAATGAATTA+GGG | + | chr7_3:83976948-83976967 | None:intergenic | 35.0% | |
ATCCTCCCCTAAAATGAATT+AGG | + | chr7_3:83976949-83976968 | None:intergenic | 35.0% | |
GCAGAAAGCAAATACAGAAA+GGG | + | chr7_3:83976977-83976996 | None:intergenic | 35.0% | |
TGCAGAAAGCAAATACAGAA+AGG | + | chr7_3:83976978-83976997 | None:intergenic | 35.0% | |
GAGACTCTTAAAATTAGGAG+TGG | + | chr7_3:83977059-83977078 | None:intergenic | 35.0% | |
CAAGGGAGACTCTTAAAATT+AGG | + | chr7_3:83977064-83977083 | None:intergenic | 35.0% | |
ATGCAAAGAAACCAGTTGTA+TGG | - | chr7_3:83977344-83977363 | Msa1131440:intron | 35.0% | |
AACAACAACAACAACAACCA+AGG | - | chr7_3:83977490-83977509 | Msa1131440:intron | 35.0% | |
TACATTCATGTGATGCAGAT+TGG | - | chr7_3:83977638-83977657 | Msa1131440:intron | 35.0% | |
CTCGTCAAAAATATAGGTCA+AGG | + | chr7_3:83977687-83977706 | None:intergenic | 35.0% | |
!! | CTTGACCTATATTTTTGACG+AGG | - | chr7_3:83977685-83977704 | Msa1131440:intron | 35.0% |
ACTAAAGCCCAAGTTTAGAA+AGG | + | chr7_3:83977733-83977752 | None:intergenic | 35.0% | |
! | TGATAACATCTTTAGGGAGA+GGG | + | chr7_3:83977819-83977838 | None:intergenic | 35.0% |
! | TTGATAACATCTTTAGGGAG+AGG | + | chr7_3:83977820-83977839 | None:intergenic | 35.0% |
! | CTTCATTTGTTGCTCGATAA+CGG | - | chr7_3:83977871-83977890 | Msa1131440:CDS | 35.0% |
TTGTTGTGGGAGTTAAAGTA+TGG | - | chr7_3:83978026-83978045 | Msa1131440:five_prime_UTR | 35.0% | |
ATTAAAGACCCAACCAAACC+GGG | - | chr7_3:83972727-83972746 | Msa1131440:three_prime_UTR | 40.0% | |
AATGACAACACAATCTCCTC+CGG | - | chr7_3:83972902-83972921 | Msa1131440:three_prime_UTR | 40.0% | |
GAAGACATACGACCTTTACT+GGG | + | chr7_3:83972959-83972978 | None:intergenic | 40.0% | |
AGAAGACATACGACCTTTAC+TGG | + | chr7_3:83972960-83972979 | None:intergenic | 40.0% | |
TTGTCAATTGTCAGTCAAGC+AGG | - | chr7_3:83973003-83973022 | Msa1131440:three_prime_UTR | 40.0% | |
GATCTTGATCTTGGTATCGT+CGG | - | chr7_3:83973215-83973234 | Msa1131440:intron | 40.0% | |
TATACTCACTGAATTTGGCC+AGG | - | chr7_3:83973244-83973263 | Msa1131440:intron | 40.0% | |
GAGAAGGAGTAGATTCATTG+CGG | - | chr7_3:83973347-83973366 | Msa1131440:intron | 40.0% | |
AGAAGGAGTAGATTCATTGC+GGG | - | chr7_3:83973348-83973367 | Msa1131440:intron | 40.0% | |
!! | TCTATGCGACTTGTTACTGA+TGG | - | chr7_3:83973836-83973855 | Msa1131440:intron | 40.0% |
CTATGCTTACTTGGTATTGC+AGG | + | chr7_3:83974010-83974029 | None:intergenic | 40.0% | |
AAGGTGGTTTATTCTTCGTG+TGG | + | chr7_3:83974104-83974123 | None:intergenic | 40.0% | |
GAAGATTCATGTTTGCGGTT+GGG | + | chr7_3:83974147-83974166 | None:intergenic | 40.0% | |
CATCGGAAGATTCATGTTTG+CGG | + | chr7_3:83974152-83974171 | None:intergenic | 40.0% | |
AATCTTCCGATGCTTTGACA+AGG | - | chr7_3:83974160-83974179 | Msa1131440:intron | 40.0% | |
AAACCATGATGAGCTTCAAG+TGG | + | chr7_3:83974194-83974213 | None:intergenic | 40.0% | |
TTATTCCTTAGGTGCAGAAC+CGG | + | chr7_3:83974274-83974293 | None:intergenic | 40.0% | |
! | ATGTTTGATGTCGCTTCACT+GGG | + | chr7_3:83974346-83974365 | None:intergenic | 40.0% |
! | AATGTTTGATGTCGCTTCAC+TGG | + | chr7_3:83974347-83974366 | None:intergenic | 40.0% |
ACGACTAGCATCCTCAATTT+CGG | + | chr7_3:83974518-83974537 | None:intergenic | 40.0% | |
ACATCTATCTCTGGTCATCA+TGG | - | chr7_3:83974585-83974604 | Msa1131440:intron | 40.0% | |
!! | ATGCAACTTTGCTTTTCCCT+CGG | - | chr7_3:83974744-83974763 | Msa1131440:intron | 40.0% |
TGCAATTGCATTTAAGCCGA+GGG | + | chr7_3:83974763-83974782 | None:intergenic | 40.0% | |
GCAATTGCAGAACAATGTTC+TGG | - | chr7_3:83974774-83974793 | Msa1131440:intron | 40.0% | |
GATCTTCATTGCCCTGATAA+AGG | + | chr7_3:83974841-83974860 | None:intergenic | 40.0% | |
GTAATTTCAACTCACCGCAA+TGG | + | chr7_3:83974909-83974928 | None:intergenic | 40.0% | |
! | ATTGCGGAATCTGAAACAAC+AGG | + | chr7_3:83975004-83975023 | None:intergenic | 40.0% |
AGCTAGCAAAAATGCCTCAA+TGG | - | chr7_3:83975057-83975076 | Msa1131440:intron | 40.0% | |
TTTCCTTCTTACTCTTCAGC+TGG | - | chr7_3:83975213-83975232 | Msa1131440:intron | 40.0% | |
TTCCTTCTTACTCTTCAGCT+GGG | - | chr7_3:83975214-83975233 | Msa1131440:intron | 40.0% | |
ACCATGGCGTTAATGTCTAA+CGG | - | chr7_3:83975546-83975565 | Msa1131440:intron | 40.0% | |
!! | GTGAAGAAGTTCTGGTTTCT+TGG | - | chr7_3:83975966-83975985 | Msa1131440:intron | 40.0% |
!!! | GGCATTGTGCTCTTTTTTTC+TGG | - | chr7_3:83975987-83976006 | Msa1131440:intron | 40.0% |
!!! | TTTTCTGGTTTATGTGGAGG+GGG | - | chr7_3:83976002-83976021 | Msa1131440:intron | 40.0% |
TCACTAAGAGCAGAGTTCAA+TGG | + | chr7_3:83976080-83976099 | None:intergenic | 40.0% | |
ATCTTGGACCTTGTAAGTAG+TGG | - | chr7_3:83976394-83976413 | Msa1131440:intron | 40.0% | |
ACGTTGTTCCACTACTTACA+AGG | + | chr7_3:83976405-83976424 | None:intergenic | 40.0% | |
!!! | TGGAACTGTTTTGGAAAGTC+AGG | - | chr7_3:83976456-83976475 | Msa1131440:intron | 40.0% |
ACAGCAGATCATGCTAGTTA+GGG | + | chr7_3:83976505-83976524 | None:intergenic | 40.0% | |
AACAGCAGATCATGCTAGTT+AGG | + | chr7_3:83976506-83976525 | None:intergenic | 40.0% | |
!!! | CTGTTTTTTTAAAAGGCGCC+TGG | - | chr7_3:83976521-83976540 | Msa1131440:intron | 40.0% |
!!! | TTTTAAAAGGCGCCTGGAAA+AGG | - | chr7_3:83976527-83976546 | Msa1131440:intron | 40.0% |
GAGTGAAACCAAAAACGACA+AGG | + | chr7_3:83976593-83976612 | None:intergenic | 40.0% | |
GCAAGCAGGAAATCATTGAT+CGG | - | chr7_3:83976646-83976665 | Msa1131440:intron | 40.0% | |
! | AAAGATTAGAGGCACATCTG+AGG | - | chr7_3:83976707-83976726 | Msa1131440:intron | 40.0% |
! | AAGATTAGAGGCACATCTGA+GGG | - | chr7_3:83976708-83976727 | Msa1131440:intron | 40.0% |
TTTCTAATGCTAAATCCGGC+AGG | - | chr7_3:83976812-83976831 | Msa1131440:intron | 40.0% | |
! | CCCCAACCCTAATTCATTTT+AGG | - | chr7_3:83976939-83976958 | Msa1131440:intron | 40.0% |
CCCCTAAAATGAATTAGGGT+TGG | + | chr7_3:83976944-83976963 | None:intergenic | 40.0% | |
!! | ACCCTAATTCATTTTAGGGG+AGG | - | chr7_3:83976944-83976963 | Msa1131440:intron | 40.0% |
CTACTCACTATCACAATGCA+TGG | + | chr7_3:83977020-83977039 | None:intergenic | 40.0% | |
TCCCTTGATTGTCTATCTAC+AGG | - | chr7_3:83977077-83977096 | Msa1131440:intron | 40.0% | |
CCCTGTAGATAGACAATCAA+GGG | + | chr7_3:83977081-83977100 | None:intergenic | 40.0% | |
CCCTTGATTGTCTATCTACA+GGG | - | chr7_3:83977078-83977097 | Msa1131440:intron | 40.0% | |
TCCCTGTAGATAGACAATCA+AGG | + | chr7_3:83977082-83977101 | None:intergenic | 40.0% | |
CAGAAAACAGGACTTACTGT+GGG | + | chr7_3:83977105-83977124 | None:intergenic | 40.0% | |
TGAAGATGGTTGTGAGCTAA+TGG | - | chr7_3:83977273-83977292 | Msa1131440:intron | 40.0% | |
GAAGATGGTTGTGAGCTAAT+GGG | - | chr7_3:83977274-83977293 | Msa1131440:intron | 40.0% | |
AAGATGGTTGTGAGCTAATG+GGG | - | chr7_3:83977275-83977294 | Msa1131440:intron | 40.0% | |
ATTAGACACGGGTGTTTGAA+TGG | - | chr7_3:83977316-83977335 | Msa1131440:intron | 40.0% | |
TTAGACACGGGTGTTTGAAT+GGG | - | chr7_3:83977317-83977336 | Msa1131440:intron | 40.0% | |
ATTCATGTGATGCAGATTGG+AGG | - | chr7_3:83977641-83977660 | Msa1131440:intron | 40.0% | |
GTCAGCTCCTTTCTAAACTT+GGG | - | chr7_3:83977723-83977742 | Msa1131440:intron | 40.0% | |
! | GATAACATCTTTAGGGAGAG+GGG | + | chr7_3:83977818-83977837 | None:intergenic | 40.0% |
ATACAAACTGATGCAGAGGT+GGG | + | chr7_3:83977905-83977924 | None:intergenic | 40.0% | |
CAACATACAAACTGATGCAG+AGG | + | chr7_3:83977909-83977928 | None:intergenic | 40.0% | |
TTAAAGACCCAACCAAACCG+GGG | - | chr7_3:83972728-83972747 | Msa1131440:three_prime_UTR | 45.0% | |
ATCATCGTCAACATTGCTGC+AGG | + | chr7_3:83972812-83972831 | None:intergenic | 45.0% | |
!! | AACTTGATGATGAGTCTCGG+AGG | + | chr7_3:83972879-83972898 | None:intergenic | 45.0% |
AGAAGACAAGAGATCCGTCT+GGG | - | chr7_3:83972929-83972948 | Msa1131440:three_prime_UTR | 45.0% | |
CTTTACTGGGTAAACCCAGA+CGG | + | chr7_3:83972946-83972965 | None:intergenic | 45.0% | |
TGATACACTCGACCTTCTCA+AGG | - | chr7_3:83972979-83972998 | Msa1131440:three_prime_UTR | 45.0% | |
ATTTGGGCAACATACTGACG+TGG | + | chr7_3:83973034-83973053 | None:intergenic | 45.0% | |
GTATGTTGCCCAAATTCCTC+AGG | - | chr7_3:83973039-83973058 | Msa1131440:CDS | 45.0% | |
GAAGGAGTAGATTCATTGCG+GGG | - | chr7_3:83973349-83973368 | Msa1131440:intron | 45.0% | |
TGTAGCGTAGGCTATGTAAC+CGG | + | chr7_3:83973492-83973511 | None:intergenic | 45.0% | |
TACATAGCCTACGCTACATG+TGG | - | chr7_3:83973494-83973513 | Msa1131440:intron | 45.0% | |
TCATTTGCCACATGTAGCGT+AGG | + | chr7_3:83973504-83973523 | None:intergenic | 45.0% | |
! | TTTTGCTGCCACATTAGCAG+TGG | - | chr7_3:83973660-83973679 | Msa1131440:CDS | 45.0% |
CAGTAACAAGTCGCATAGAG+AGG | + | chr7_3:83973835-83973854 | None:intergenic | 45.0% | |
GGTTTCGAGCTAAGATAGTG+AGG | + | chr7_3:83974083-83974102 | None:intergenic | 45.0% | |
CTAGAGGACTCCCAATTTCA+AGG | + | chr7_3:83974123-83974142 | None:intergenic | 45.0% | |
GGAAGATTCATGTTTGCGGT+TGG | + | chr7_3:83974148-83974167 | None:intergenic | 45.0% | |
TTACCGCCTTGTCAAAGCAT+CGG | + | chr7_3:83974169-83974188 | None:intergenic | 45.0% | |
ACTCCACTTGAAGCTCATCA+TGG | - | chr7_3:83974188-83974207 | Msa1131440:intron | 45.0% | |
TATTCCTTAGGTGCAGAACC+GGG | + | chr7_3:83974273-83974292 | None:intergenic | 45.0% | |
CACTGGGAAAGTTGGCATAA+TGG | + | chr7_3:83974330-83974349 | None:intergenic | 45.0% | |
! | CACTACTTACTGGTCTCAGT+AGG | + | chr7_3:83974446-83974465 | None:intergenic | 45.0% |
CTCTGATGAGTCCGAAATTG+AGG | - | chr7_3:83974504-83974523 | Msa1131440:intron | 45.0% | |
TTGTGTGCTTTAGCCCTGAT+CGG | - | chr7_3:83974644-83974663 | Msa1131440:intron | 45.0% | |
CTGCAATTGCATTTAAGCCG+AGG | + | chr7_3:83974764-83974783 | None:intergenic | 45.0% | |
AGATCTTATCGTTGTCCACG+AGG | - | chr7_3:83974856-83974875 | Msa1131440:intron | 45.0% | |
GGCTTATCTTCTGTCCATTG+AGG | + | chr7_3:83975074-83975093 | None:intergenic | 45.0% | |
CAAACACTATCTCTTACCGC+AGG | + | chr7_3:83975313-83975332 | None:intergenic | 45.0% | |
ACATGGCACATAGAGCTTTC+CGG | + | chr7_3:83975805-83975824 | None:intergenic | 45.0% | |
TTCACAAATGCCGGTCAACA+TGG | + | chr7_3:83975822-83975841 | None:intergenic | 45.0% | |
!! | TTTCTGGTTTATGTGGAGGG+GGG | - | chr7_3:83976003-83976022 | Msa1131440:intron | 45.0% |
! | TGTTTTACGATTGGGTCCCA+AGG | - | chr7_3:83976047-83976066 | Msa1131440:intron | 45.0% |
CAGCATCAATGAGATGGTGA+CGG | + | chr7_3:83976291-83976310 | None:intergenic | 45.0% | |
TTGATGCTGCTGCCATATGT+TGG | - | chr7_3:83976302-83976321 | Msa1131440:intron | 45.0% | |
AAAAAACTGGTGAGGAGACG+AGG | + | chr7_3:83976774-83976793 | None:intergenic | 45.0% | |
GAGAGAGGAAAAAACTGGTG+AGG | + | chr7_3:83976782-83976801 | None:intergenic | 45.0% | |
! | TCATGTTTGCTACAACCTGC+CGG | + | chr7_3:83976830-83976849 | None:intergenic | 45.0% |
CAGGTTGTAGCAAACATGAG+AGG | - | chr7_3:83976831-83976850 | Msa1131440:intron | 45.0% | |
GCAGAAAACAGGACTTACTG+TGG | + | chr7_3:83977106-83977125 | None:intergenic | 45.0% | |
CTTGGGCACACATATGACTA+TGG | + | chr7_3:83977163-83977182 | None:intergenic | 45.0% | |
AGTCATATGTGTGCCCAAGA+AGG | - | chr7_3:83977164-83977183 | Msa1131440:intron | 45.0% | |
GACTTGTACAGTGCCTTCTT+GGG | + | chr7_3:83977180-83977199 | None:intergenic | 45.0% | |
AGACTTGTACAGTGCCTTCT+TGG | + | chr7_3:83977181-83977200 | None:intergenic | 45.0% | |
GTCTATACAGCAACTGAGAG+CGG | - | chr7_3:83977197-83977216 | Msa1131440:intron | 45.0% | |
TGAGCTAATGGGGCTAACTT+AGG | - | chr7_3:83977285-83977304 | Msa1131440:intron | 45.0% | |
CAAGGCTTATCCCACTAAGT+GGG | - | chr7_3:83977508-83977527 | Msa1131440:intron | 45.0% | |
AAGGCTTATCCCACTAAGTG+GGG | - | chr7_3:83977509-83977528 | Msa1131440:intron | 45.0% | |
TTGACGAGGAAACTCCTAGA+TGG | - | chr7_3:83977699-83977718 | Msa1131440:intron | 45.0% | |
CGTCAGCTCCTTTCTAAACT+TGG | - | chr7_3:83977722-83977741 | Msa1131440:intron | 45.0% | |
! | CATTTGTTGCTCGATAACGG+AGG | - | chr7_3:83977874-83977893 | Msa1131440:CDS | 45.0% |
CATACAAACTGATGCAGAGG+TGG | + | chr7_3:83977906-83977925 | None:intergenic | 45.0% | |
AGTGTTCGATTGAGACACCC+CGG | + | chr7_3:83972748-83972767 | None:intergenic | 50.0% | |
GATGGCGAAGCTAAAGTCTG+TGG | + | chr7_3:83972774-83972793 | None:intergenic | 50.0% | |
ATCGTCAACATTGCTGCAGG+AGG | + | chr7_3:83972809-83972828 | None:intergenic | 50.0% | |
ATGAGTCTCGGAGGAGATTG+AGG | + | chr7_3:83972870-83972889 | None:intergenic | 50.0% | |
GATCTCTTGTCTTCTGCTGC+CGG | + | chr7_3:83972924-83972943 | None:intergenic | 50.0% | |
CAGAAGACAAGAGATCCGTC+TGG | - | chr7_3:83972928-83972947 | Msa1131440:three_prime_UTR | 50.0% | |
CGTCTGGGTTTACCCAGTAA+AGG | - | chr7_3:83972944-83972963 | Msa1131440:three_prime_UTR | 50.0% | |
GCGAAGAAACGGAAACGAGA+AGG | + | chr7_3:83973634-83973653 | None:intergenic | 50.0% | |
GAGGACTCCCAATTTCAAGG+TGG | + | chr7_3:83974120-83974139 | None:intergenic | 50.0% | |
ATGTTTGCGGTTGGGTCTAG+AGG | + | chr7_3:83974139-83974158 | None:intergenic | 50.0% | |
CTTCCGATGCTTTGACAAGG+CGG | - | chr7_3:83974163-83974182 | Msa1131440:intron | 50.0% | |
ATATCCCGGTTCTGCACCTA+AGG | - | chr7_3:83974266-83974285 | Msa1131440:intron | 50.0% | |
! | TGTCGCTTCACTGGGAAAGT+TGG | + | chr7_3:83974338-83974357 | None:intergenic | 50.0% |
TTCGGACTCATCAGAGCTGT+GGG | + | chr7_3:83974500-83974519 | None:intergenic | 50.0% | |
TTTCGGACTCATCAGAGCTG+TGG | + | chr7_3:83974501-83974520 | None:intergenic | 50.0% | |
TATCGTTGTCCACGAGGCTT+TGG | - | chr7_3:83974862-83974881 | Msa1131440:intron | 50.0% | |
AATCCAGTTGCAACTCGCAG+AGG | + | chr7_3:83975095-83975114 | None:intergenic | 50.0% | |
GACCCAGCTGAAGAGTAAGA+AGG | + | chr7_3:83975219-83975238 | None:intergenic | 50.0% | |
! | GTGGCATTTTCGACTGCTGA+CGG | - | chr7_3:83975271-83975290 | Msa1131440:intron | 50.0% |
GCCGTTAGACATTAACGCCA+TGG | + | chr7_3:83975550-83975569 | None:intergenic | 50.0% | |
GCTCTATGTGCCATGTTGAC+CGG | - | chr7_3:83975809-83975828 | Msa1131440:intron | 50.0% | |
TCGGGAACGTTCACAAATGC+CGG | + | chr7_3:83975831-83975850 | None:intergenic | 50.0% | |
GTTCAATGGCAACAGGCCTT+GGG | + | chr7_3:83976066-83976085 | None:intergenic | 50.0% | |
AGTTCAATGGCAACAGGCCT+TGG | + | chr7_3:83976067-83976086 | None:intergenic | 50.0% | |
GAGCAGAGTTCAATGGCAAC+AGG | + | chr7_3:83976073-83976092 | None:intergenic | 50.0% | |
TGGCAGCAGCATCAATGAGA+TGG | + | chr7_3:83976297-83976316 | None:intergenic | 50.0% | |
GGGGATTGCTGATGCTATCT+TGG | - | chr7_3:83976378-83976397 | Msa1131440:intron | 50.0% | |
! | CATGAGAAGCAGCCTTTTCC+AGG | + | chr7_3:83976542-83976561 | None:intergenic | 50.0% |
GGCTGCTTCTCATGTCTTGT+TGG | - | chr7_3:83976548-83976567 | Msa1131440:intron | 50.0% | |
CATGAGAGGAAGTAGTGCAG+AGG | - | chr7_3:83976845-83976864 | Msa1131440:intron | 50.0% | |
AGGAAGTAGTGCAGAGGAAG+TGG | - | chr7_3:83976851-83976870 | Msa1131440:intron | 50.0% | |
TGAGCCAACCATCGTTAGCT+GGG | - | chr7_3:83976886-83976905 | Msa1131440:intron | 50.0% | |
CTGGGTTGCAGGTGTGATAT+GGG | - | chr7_3:83976904-83976923 | Msa1131440:intron | 50.0% | |
TTTCTGCAAGCGCGATGGAA+AGG | - | chr7_3:83977119-83977138 | Msa1131440:intron | 50.0% | |
CCACTTAGTGGGATAAGCCT+TGG | + | chr7_3:83977510-83977529 | None:intergenic | 50.0% | |
CCAAGGCTTATCCCACTAAG+TGG | - | chr7_3:83977507-83977526 | Msa1131440:intron | 50.0% | |
CTTATCCCACTAAGTGGGGT+CGG | - | chr7_3:83977513-83977532 | Msa1131440:intron | 50.0% | |
AAGTGGGGTCGGCATTCAAA+TGG | - | chr7_3:83977524-83977543 | Msa1131440:CDS | 50.0% | |
!! | TGAGACACCCCGGTTTGGTT+GGG | + | chr7_3:83972738-83972757 | None:intergenic | 55.0% |
!! | TTGAGACACCCCGGTTTGGT+TGG | + | chr7_3:83972739-83972758 | None:intergenic | 55.0% |
TCGATTGAGACACCCCGGTT+TGG | + | chr7_3:83972743-83972762 | None:intergenic | 55.0% | |
AGGAGGAACGACGCTGATGA+TGG | + | chr7_3:83972792-83972811 | None:intergenic | 55.0% | |
GAGGCGTAGCAGCAATAGAG+AGG | + | chr7_3:83972851-83972870 | None:intergenic | 55.0% | |
TGTGCTTTAGCCCTGATCGG+CGG | - | chr7_3:83974647-83974666 | Msa1131440:intron | 55.0% | |
GCAAGTAGAACCGCCGATCA+GGG | + | chr7_3:83974660-83974679 | None:intergenic | 55.0% | |
!! | GTCCACGAGGCTTTGGAGTA+CGG | - | chr7_3:83974869-83974888 | Msa1131440:intron | 55.0% |
AAGCCTCTGCGAGTTGCAAC+TGG | - | chr7_3:83975089-83975108 | Msa1131440:intron | 55.0% | |
AGGCTGCTCTTGTTGCAAGC+AGG | - | chr7_3:83976632-83976651 | Msa1131440:intron | 55.0% | |
! | AGAGGCACATCTGAGGGCTA+TGG | - | chr7_3:83976714-83976733 | Msa1131440:intron | 55.0% |
GAGGCACATCTGAGGGCTAT+GGG | - | chr7_3:83976715-83976734 | Msa1131440:intron | 55.0% | |
AGGCACATCTGAGGGCTATG+GGG | - | chr7_3:83976716-83976735 | Msa1131440:intron | 55.0% | |
CTGAGCCAACCATCGTTAGC+TGG | - | chr7_3:83976885-83976904 | Msa1131440:intron | 55.0% | |
GCAACCCAGCTAACGATGGT+TGG | + | chr7_3:83976893-83976912 | None:intergenic | 55.0% | |
ACCATCGTTAGCTGGGTTGC+AGG | - | chr7_3:83976893-83976912 | Msa1131440:intron | 55.0% | |
ACCTGCAACCCAGCTAACGA+TGG | + | chr7_3:83976897-83976916 | None:intergenic | 55.0% | |
GCTGGGTTGCAGGTGTGATA+TGG | - | chr7_3:83976903-83976922 | Msa1131440:intron | 55.0% | |
CCATCGCGCTTGCAGAAAAC+AGG | + | chr7_3:83977117-83977136 | None:intergenic | 55.0% | |
! | CCTGTTTTCTGCAAGCGCGA+TGG | - | chr7_3:83977114-83977133 | Msa1131440:intron | 55.0% |
GTCATGCTTGCCATCGCCAA+GGG | + | chr7_3:83977413-83977432 | None:intergenic | 55.0% | |
AGTCATGCTTGCCATCGCCA+AGG | + | chr7_3:83977414-83977433 | None:intergenic | 55.0% | |
GAATGCCGACCCCACTTAGT+GGG | + | chr7_3:83977521-83977540 | None:intergenic | 55.0% | |
TGAATGCCGACCCCACTTAG+TGG | + | chr7_3:83977522-83977541 | None:intergenic | 55.0% | |
GTGATGCAGATTGGAGGCAG+CGG | - | chr7_3:83977647-83977666 | Msa1131440:intron | 55.0% | |
GAAAGGAGCTGACGCCATCT+AGG | + | chr7_3:83977716-83977735 | None:intergenic | 55.0% | |
CTCTTGTCTTCTGCTGCCGG+AGG | + | chr7_3:83972921-83972940 | None:intergenic | 60.0% | |
CGCAAGTAGAACCGCCGATC+AGG | + | chr7_3:83974661-83974680 | None:intergenic | 60.0% | |
CACCGTACTCCAAAGCCTCG+TGG | + | chr7_3:83974874-83974893 | None:intergenic | 60.0% | |
TTCGACTGCTGACGGAGCAC+TGG | - | chr7_3:83975279-83975298 | Msa1131440:intron | 60.0% | |
GAGGGCTATGGGGCAGTTCA+CGG | - | chr7_3:83976726-83976745 | Msa1131440:intron | 60.0% | |
ACTCCCTGACCTGTTGCCCT+TGG | - | chr7_3:83977394-83977413 | Msa1131440:intron | 60.0% | |
TCGCCAAGGGCAACAGGTCA+GGG | + | chr7_3:83977400-83977419 | None:intergenic | 60.0% | |
ATCGCCAAGGGCAACAGGTC+AGG | + | chr7_3:83977401-83977420 | None:intergenic | 60.0% | |
TGACCTGTTGCCCTTGGCGA+TGG | - | chr7_3:83977400-83977419 | Msa1131440:intron | 60.0% | |
TTGCCATCGCCAAGGGCAAC+AGG | + | chr7_3:83977406-83977425 | None:intergenic | 60.0% | |
!! | GACTGCTGACGGAGCACTGG+AGG | - | chr7_3:83975282-83975301 | Msa1131440:intron | 65.0% |
! | AGCACTGGAGGCAGCTCCTG+CGG | - | chr7_3:83975294-83975313 | Msa1131440:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 83972699 | 83978090 | 83972699 | ID=Msa1131440;Name=Msa1131440 |
chr7_3 | mRNA | 83972699 | 83978090 | 83972699 | ID=Msa1131440-mRNA-1;Parent=Msa1131440;Name=Msa1131440-mRNA-1;_AED=0.15;_eAED=0.15;_QI=119|1|1|1|1|1|10|339|375 |
chr7_3 | exon | 83972699 | 83973133 | 83972699 | ID=Msa1131440-mRNA-1:exon:24957;Parent=Msa1131440-mRNA-1 |
chr7_3 | exon | 83973571 | 83973690 | 83973571 | ID=Msa1131440-mRNA-1:exon:24956;Parent=Msa1131440-mRNA-1 |
chr7_3 | exon | 83973875 | 83973955 | 83973875 | ID=Msa1131440-mRNA-1:exon:24955;Parent=Msa1131440-mRNA-1 |
chr7_3 | exon | 83974042 | 83974155 | 83974042 | ID=Msa1131440-mRNA-1:exon:24954;Parent=Msa1131440-mRNA-1 |
chr7_3 | exon | 83974312 | 83974413 | 83974312 | ID=Msa1131440-mRNA-1:exon:24953;Parent=Msa1131440-mRNA-1 |
chr7_3 | exon | 83975474 | 83975557 | 83975474 | ID=Msa1131440-mRNA-1:exon:24952;Parent=Msa1131440-mRNA-1 |
chr7_3 | exon | 83975668 | 83975775 | 83975668 | ID=Msa1131440-mRNA-1:exon:24951;Parent=Msa1131440-mRNA-1 |
chr7_3 | exon | 83975876 | 83975941 | 83975876 | ID=Msa1131440-mRNA-1:exon:24950;Parent=Msa1131440-mRNA-1 |
chr7_3 | exon | 83977524 | 83977637 | 83977524 | ID=Msa1131440-mRNA-1:exon:24949;Parent=Msa1131440-mRNA-1 |
chr7_3 | exon | 83977729 | 83978090 | 83977729 | ID=Msa1131440-mRNA-1:exon:24948;Parent=Msa1131440-mRNA-1 |
chr7_3 | five_prime_UTR | 83977972 | 83978090 | 83977972 | ID=Msa1131440-mRNA-1:five_prime_utr;Parent=Msa1131440-mRNA-1 |
chr7_3 | CDS | 83977729 | 83977971 | 83977729 | ID=Msa1131440-mRNA-1:cds;Parent=Msa1131440-mRNA-1 |
chr7_3 | CDS | 83977524 | 83977637 | 83977524 | ID=Msa1131440-mRNA-1:cds;Parent=Msa1131440-mRNA-1 |
chr7_3 | CDS | 83975876 | 83975941 | 83975876 | ID=Msa1131440-mRNA-1:cds;Parent=Msa1131440-mRNA-1 |
chr7_3 | CDS | 83975668 | 83975775 | 83975668 | ID=Msa1131440-mRNA-1:cds;Parent=Msa1131440-mRNA-1 |
chr7_3 | CDS | 83975474 | 83975557 | 83975474 | ID=Msa1131440-mRNA-1:cds;Parent=Msa1131440-mRNA-1 |
chr7_3 | CDS | 83974312 | 83974413 | 83974312 | ID=Msa1131440-mRNA-1:cds;Parent=Msa1131440-mRNA-1 |
chr7_3 | CDS | 83974042 | 83974155 | 83974042 | ID=Msa1131440-mRNA-1:cds;Parent=Msa1131440-mRNA-1 |
chr7_3 | CDS | 83973875 | 83973955 | 83973875 | ID=Msa1131440-mRNA-1:cds;Parent=Msa1131440-mRNA-1 |
chr7_3 | CDS | 83973571 | 83973690 | 83973571 | ID=Msa1131440-mRNA-1:cds;Parent=Msa1131440-mRNA-1 |
chr7_3 | CDS | 83973038 | 83973133 | 83973038 | ID=Msa1131440-mRNA-1:cds;Parent=Msa1131440-mRNA-1 |
chr7_3 | three_prime_UTR | 83972699 | 83973037 | 83972699 | ID=Msa1131440-mRNA-1:three_prime_utr;Parent=Msa1131440-mRNA-1 |
Gene Sequence |
Protein sequence |