AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1131440


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1131440 MtrunA17_Chr4g0073831 96.552 377 7 2 1 375 1 373 0.0 744
Msa1131440 MtrunA17_Chr2g0277331 77.913 412 35 6 3 375 5 399 0.0 614
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1131440 AT1G09795.1 81.894 359 64 1 18 375 55 413 0.0 612
Msa1131440 AT1G58080.1 82.789 337 58 0 39 375 75 411 0.0 592

Find 116 sgRNAs with CRISPR-Local

Find 378 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTTGATACTAGATAATT+TGG 0.099377 7_3:-83972794 Msa1131440:three_prime_UTR
ATTAATTAACCTGAGGAATT+TGG 0.106128 7_3:+83977719 None:intergenic
TCATACATGTGTTCCATTTA+TGG 0.107480 7_3:-83973015 Msa1131440:three_prime_UTR
CCATTATCTTTCATAAATTT+AGG 0.185647 7_3:+83975529 None:intergenic
TAACAATGTCTTTGGGTCTT+TGG 0.196414 7_3:+83977592 None:intergenic
TCTGCATTGATAACATCTTT+AGG 0.240128 7_3:+83972944 None:intergenic
CTCGATATACTCACTGAATT+TGG 0.245090 7_3:-83977528 Msa1131440:CDS
CTGCATTGATAACATCTTTA+GGG 0.247183 7_3:+83972945 None:intergenic
AATTGAAGGTGGAACTGTTT+TGG 0.258121 7_3:-83974320 Msa1131440:CDS
AGAAGACATACGACCTTTAC+TGG 0.266634 7_3:+83977810 None:intergenic
AATAGAGAGGTAAACGAATT+TGG 0.271491 7_3:+83977932 None:intergenic
TTGTTTCAGATTCCGCAATA+TGG 0.287466 7_3:-83975762 Msa1131440:intron
CGTCAGCTCCTTTCTAAACT+TGG 0.295403 7_3:-83973045 Msa1131440:CDS
TTAATTAACCTGAGGAATTT+GGG 0.303133 7_3:+83977720 None:intergenic
CCTAAATTTATGAAAGATAA+TGG 0.327102 7_3:-83975529 Msa1131440:CDS
ATTGTTAGAAAATTGTTATC+TGG 0.350355 7_3:-83977576 Msa1131440:CDS
AGACTTGTACAGTGCCTTCT+TGG 0.359607 7_3:+83973589 None:intergenic
TATCGTTGTCCACGAGGCTT+TGG 0.367464 7_3:-83975905 Msa1131440:CDS
CTCTTGATACTAGATAATTT+GGG 0.374851 7_3:-83972793 Msa1131440:three_prime_UTR
AGATTTCAAACTTGGAAGTC+TGG 0.377840 7_3:-83977617 Msa1131440:CDS
TTATCTGGAGATCTTGATCT+TGG 0.378632 7_3:-83977561 Msa1131440:CDS
CCATCGCGCTTGCAGAAAAC+AGG 0.381923 7_3:+83973653 None:intergenic
CTTGGGCACACATATGACTA+TGG 0.388474 7_3:+83973607 None:intergenic
AAGCCTCTGCGAGTTGCAAC+TGG 0.392840 7_3:-83975678 Msa1131440:CDS
TGAGATGCTTGAAAGATTAG+AGG 0.394252 7_3:-83974071 Msa1131440:CDS
TACACTGCAGATTTCAAACT+TGG 0.415322 7_3:-83977625 Msa1131440:intron
ACCATCGTTAGCTGGGTTGC+AGG 0.420563 7_3:-83973874 Msa1131440:intron
GGGGATTGCTGATGCTATCT+TGG 0.420913 7_3:-83974389 Msa1131440:CDS
TGAGACACCCCGGTTTGGTT+GGG 0.423002 7_3:+83978032 None:intergenic
CTGAGCCAACCATCGTTAGC+TGG 0.423235 7_3:-83973882 Msa1131440:CDS
AATTAAAGACCCAACCAAAC+CGG 0.424516 7_3:-83978041 Msa1131440:five_prime_UTR
GACTTGTACAGTGCCTTCTT+GGG 0.445015 7_3:+83973590 None:intergenic
GTCAGCTCCTTTCTAAACTT+GGG 0.445359 7_3:-83973044 Msa1131440:CDS
CTTCATTTGTTGCTCGATAA+CGG 0.446176 7_3:-83972896 Msa1131440:three_prime_UTR
TTGAGACACCCCGGTTTGGT+TGG 0.457570 7_3:+83978031 None:intergenic
GTTGAAAGAAAATAACTTGA+AGG 0.459040 7_3:-83974344 Msa1131440:CDS
GAGGGCTATGGGGCAGTTCA+CGG 0.460141 7_3:-83974041 Msa1131440:intron
AGAGGCACATCTGAGGGCTA+TGG 0.460886 7_3:-83974053 Msa1131440:CDS
TTCGACTGCTGACGGAGCAC+TGG 0.466865 7_3:-83975488 Msa1131440:CDS
GTCCACGAGGCTTTGGAGTA+CGG 0.469178 7_3:-83975898 Msa1131440:CDS
GATCTCTTGTCTTCTGCTGC+CGG 0.470766 7_3:+83977846 None:intergenic
AGGAAGTAGTGCAGAGGAAG+TGG 0.471067 7_3:-83973916 Msa1131440:CDS
AATTGAAGAAAAGAAACTAT+AGG 0.475203 7_3:+83972822 None:intergenic
TTGACGAGGAAACTCCTAGA+TGG 0.477208 7_3:-83973068 Msa1131440:CDS
TCGATTGAGACACCCCGGTT+TGG 0.482709 7_3:+83978027 None:intergenic
TTGTTGTGGGAGTTAAAGTA+TGG 0.483141 7_3:-83972741 Msa1131440:three_prime_UTR
AGGCTGCTCTTGTTGCAAGC+AGG 0.487061 7_3:-83974135 Msa1131440:CDS
ACGTTGTTCCACTACTTACA+AGG 0.492916 7_3:+83974365 None:intergenic
TTTAACTTCAACAATTGTTG+TGG 0.494697 7_3:-83972755 Msa1131440:three_prime_UTR
TTGTCAATTGTCAGTCAAGC+AGG 0.495907 7_3:-83977764 Msa1131440:CDS
TTAACTTCAACAATTGTTGT+GGG 0.502935 7_3:-83972754 Msa1131440:three_prime_UTR
GAGGCACATCTGAGGGCTAT+GGG 0.505249 7_3:-83974052 Msa1131440:CDS
AAATCATTGATCGGACGAAA+AGG 0.506065 7_3:-83974112 Msa1131440:CDS
GAAAGGAGCTGACGCCATCT+AGG 0.514685 7_3:+83973054 None:intergenic
ATTAAAGACCCAACCAAACC+GGG 0.517060 7_3:-83978040 Msa1131440:five_prime_UTR
AGGAGGAACGACGCTGATGA+TGG 0.517427 7_3:+83977978 None:intergenic
ATGAGTCTCGGAGGAGATTG+AGG 0.524502 7_3:+83977900 None:intergenic
CAGAAGACAAGAGATCCGTC+TGG 0.525828 7_3:-83977839 Msa1131440:CDS
GTATGTTGCCCAAATTCCTC+AGG 0.527688 7_3:-83977728 Msa1131440:intron
ATCATCGTCAACATTGCTGC+AGG 0.528756 7_3:+83977958 None:intergenic
ATACTAGATAATTTGGGATG+CGG 0.531826 7_3:-83972787 Msa1131440:three_prime_UTR
ACTAAAGCCCAAGTTTAGAA+AGG 0.532749 7_3:+83973037 None:intergenic
TGATAACATCTTTAGGGAGA+GGG 0.534427 7_3:+83972951 None:intergenic
AATAACTTGAAGGAAATTGA+AGG 0.546732 7_3:-83974334 Msa1131440:CDS
TTGATAACATCTTTAGGGAG+AGG 0.551055 7_3:+83972950 None:intergenic
TGATACACTCGACCTTCTCA+AGG 0.552104 7_3:-83977788 Msa1131440:CDS
GGCTTATCTTCTGTCCATTG+AGG 0.552577 7_3:+83975696 None:intergenic
ATCTTGGACCTTGTAAGTAG+TGG 0.552901 7_3:-83974373 Msa1131440:CDS
GATCTTGATCTTGGTATCGT+CGG 0.554851 7_3:-83977552 Msa1131440:CDS
TGAGCCAACCATCGTTAGCT+GGG 0.555529 7_3:-83973881 Msa1131440:CDS
GACTGCTGACGGAGCACTGG+AGG 0.563946 7_3:-83975485 Msa1131440:CDS
CATACAAACTGATGCAGAGG+TGG 0.567776 7_3:+83972864 None:intergenic
AGTCATATGTGTGCCCAAGA+AGG 0.572168 7_3:-83973603 Msa1131440:CDS
TATACTCACTGAATTTGGCC+AGG 0.572345 7_3:-83977523 Msa1131440:intron
AATGACAACACAATCTCCTC+CGG 0.573673 7_3:-83977865 Msa1131440:CDS
AGCACTGGAGGCAGCTCCTG+CGG 0.577767 7_3:-83975473 Msa1131440:intron
ATTCATGTGATGCAGATTGG+AGG 0.578035 7_3:-83973126 Msa1131440:intron
GCAACCCAGCTAACGATGGT+TGG 0.580333 7_3:+83973877 None:intergenic
CGTCTGGGTTTACCCAGTAA+AGG 0.581574 7_3:-83977823 Msa1131440:CDS
TGAAAATGTAAATTCACTAG+AGG 0.584392 7_3:-83975733 Msa1131440:CDS
TTTCTGCAAGCGCGATGGAA+AGG 0.585463 7_3:-83973648 Msa1131440:CDS
CTCTTGTCTTCTGCTGCCGG+AGG 0.586047 7_3:+83977849 None:intergenic
AAGATTAGAGGCACATCTGA+GGG 0.596395 7_3:-83974059 Msa1131440:CDS
GTGATGCAGATTGGAGGCAG+CGG 0.598542 7_3:-83973120 Msa1131440:intron
GTAATTTCAACTCACCGCAA+TGG 0.599912 7_3:+83975861 None:intergenic
GTCTATACAGCAACTGAGAG+CGG 0.600820 7_3:-83973570 Msa1131440:intron
AAGAACTTGATGATGAGTCT+CGG 0.602026 7_3:+83977888 None:intergenic
GATAACATCTTTAGGGAGAG+GGG 0.611885 7_3:+83972952 None:intergenic
GCAAGCAGGAAATCATTGAT+CGG 0.612487 7_3:-83974121 Msa1131440:CDS
ATCGTCAACATTGCTGCAGG+AGG 0.616930 7_3:+83977961 None:intergenic
AAAGATTAGAGGCACATCTG+AGG 0.618033 7_3:-83974060 Msa1131440:CDS
GAAGACATACGACCTTTACT+GGG 0.626259 7_3:+83977811 None:intergenic
AGAAGACAAGAGATCCGTCT+GGG 0.626407 7_3:-83977838 Msa1131440:CDS
ACAATTGACAATCCTTGAGA+AGG 0.631059 7_3:+83977776 None:intergenic
TGATTGTCGTTTATCCATTG+CGG 0.633490 7_3:-83975875 Msa1131440:intron
AGATAATGGTATTAAGCATG+TGG 0.634797 7_3:-83975515 Msa1131440:CDS
CAACATACAAACTGATGCAG+AGG 0.635116 7_3:+83972861 None:intergenic
GAGGCGTAGCAGCAATAGAG+AGG 0.638994 7_3:+83977919 None:intergenic
CAGAAAACAGGACTTACTGT+GGG 0.647329 7_3:+83973665 None:intergenic
CAGGTTGTAGCAAACATGAG+AGG 0.648123 7_3:-83973936 Msa1131440:CDS
AACTTGAAGGAAATTGAAGG+TGG 0.649831 7_3:-83974331 Msa1131440:CDS
GCAGAAAACAGGACTTACTG+TGG 0.653659 7_3:+83973664 None:intergenic
AATCCAGTTGCAACTCGCAG+AGG 0.653851 7_3:+83975675 None:intergenic
AGTGTTCGATTGAGACACCC+CGG 0.654360 7_3:+83978022 None:intergenic
CATGAGAGGAAGTAGTGCAG+AGG 0.654817 7_3:-83973922 Msa1131440:CDS
ATACAAACTGATGCAGAGGT+GGG 0.659693 7_3:+83972865 None:intergenic
AGGCACATCTGAGGGCTATG+GGG 0.661787 7_3:-83974051 Msa1131440:CDS
AGATCTTATCGTTGTCCACG+AGG 0.663229 7_3:-83975911 Msa1131440:CDS
ACCTGCAACCCAGCTAACGA+TGG 0.667474 7_3:+83973873 None:intergenic
CACCGTACTCCAAAGCCTCG+TGG 0.672065 7_3:+83975896 None:intergenic
CTTTACTGGGTAAACCCAGA+CGG 0.678884 7_3:+83977824 None:intergenic
ATTTGGGCAACATACTGACG+TGG 0.682664 7_3:+83977736 None:intergenic
GATGGCGAAGCTAAAGTCTG+TGG 0.688485 7_3:+83977996 None:intergenic
AACTTGATGATGAGTCTCGG+AGG 0.694599 7_3:+83977891 None:intergenic
CATTTGTTGCTCGATAACGG+AGG 0.710681 7_3:-83972893 Msa1131440:three_prime_UTR
TTAAAGACCCAACCAAACCG+GGG 0.720593 7_3:-83978039 Msa1131440:five_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAATTTAAATATATATT+TGG + chr7_3:83972702-83972721 None:intergenic 0.0%
!! ATTATCTAAATGAATAAAAA+AGG + chr7_3:83976334-83976353 None:intergenic 10.0%
!! TTATTATTATAATGAAGAGA+AGG + chr7_3:83973088-83973107 None:intergenic 15.0%
!!! ATTTCTTTATTATCTTTTCT+CGG - chr7_3:83973279-83973298 Msa1131440:intron 15.0%
!!! TTTTATATGTTTCAATGTAT+GGG - chr7_3:83973319-83973338 Msa1131440:intron 15.0%
!! AAAAAACAATCACATTAATT+GGG + chr7_3:83973376-83973395 None:intergenic 15.0%
!! AAAAAAACAATCACATTAAT+TGG + chr7_3:83973377-83973396 None:intergenic 15.0%
!! AAAAAACAATCACATTAATT+GGG + chr7_3:83973376-83973395 None:intergenic 15.0%
!!! TGTTTGAATTTTAAATTTAG+CGG + chr7_3:83974371-83974390 None:intergenic 15.0%
!! ATGTTAATTGTACTAAATAT+AGG + chr7_3:83974401-83974420 None:intergenic 15.0%
!! TTAAATCAAATGATAGTTAT+TGG - chr7_3:83975412-83975431 Msa1131440:intron 15.0%
!! TAAATCAAATGATAGTTATT+GGG - chr7_3:83975413-83975432 Msa1131440:intron 15.0%
!! ATATTATCTTCAAATTTCAT+AGG - chr7_3:83975576-83975595 Msa1131440:intron 15.0%
!! GATAAAAAATATTGAGAAAA+AGG + chr7_3:83976224-83976243 None:intergenic 15.0%
!!! AATTTTCTAACAATGTCTTT+GGG + chr7_3:83973185-83973204 None:intergenic 20.0%
!! ATTGTTAGAAAATTGTTATC+TGG - chr7_3:83973191-83973210 Msa1131440:intron 20.0%
!!! CTTTTATATGTTTCAATGTA+TGG - chr7_3:83973318-83973337 Msa1131440:intron 20.0%
!! GAAAAAACAATCACATTAAT+TGG + chr7_3:83973470-83973489 None:intergenic 20.0%
!!! ATTAATGTGATTGTTTTTTC+CGG - chr7_3:83973470-83973489 Msa1131440:intron 20.0%
!!! GATAAATTCTAAGAAATAGA+AGG + chr7_3:83973704-83973723 None:intergenic 20.0%
!!! TTAATATTTCTATGCTTACT+TGG + chr7_3:83973972-83973991 None:intergenic 20.0%
!!! AATCGTTTTCTATAGAAAAA+AGG - chr7_3:83974237-83974256 Msa1131440:intron 20.0%
!!! GTTTGAATTTTAAATTTAGC+GGG + chr7_3:83974370-83974389 None:intergenic 20.0%
!!! GATAAAAATATTGATTCTCA+TGG + chr7_3:83974805-83974824 None:intergenic 20.0%
!! TATAACAATTATCCTTTATC+AGG - chr7_3:83974826-83974845 Msa1131440:intron 20.0%
!! ATAACAATTATCCTTTATCA+GGG - chr7_3:83974827-83974846 Msa1131440:intron 20.0%
!!! TTTTCAAATATTCCATATTG+CGG + chr7_3:83975020-83975039 None:intergenic 20.0%
!! CCATTATCTTTCATAAATTT+AGG + chr7_3:83975241-83975260 None:intergenic 20.0%
!! CCTAAATTTATGAAAGATAA+TGG - chr7_3:83975238-83975257 Msa1131440:intron 20.0%
!! AGTCAAGAATTATAAATTGT+AGG - chr7_3:83975688-83975707 Msa1131440:CDS 20.0%
!! TGAAAGATATAATAAGCTTT+AGG - chr7_3:83975747-83975766 Msa1131440:CDS 20.0%
!! CTGATCTAATTATAAATTTC+TGG - chr7_3:83975901-83975920 Msa1131440:CDS 20.0%
!!! TTTTGCTTATCATATTCATA+TGG - chr7_3:83977458-83977477 Msa1131440:intron 20.0%
!! TGTAAAAAAAACTCCATAAA+TGG + chr7_3:83977768-83977787 None:intergenic 20.0%
!! AATTGAAGAAAAGAAACTAT+AGG + chr7_3:83977948-83977967 None:intergenic 20.0%
! TTAATTAACCTGAGGAATTT+GGG + chr7_3:83973050-83973069 None:intergenic 25.0%
! ATTAATTAACCTGAGGAATT+TGG + chr7_3:83973051-83973070 None:intergenic 25.0%
! GTAAGTAATTAATTAACCTG+AGG + chr7_3:83973058-83973077 None:intergenic 25.0%
!! CAATTTTCTAACAATGTCTT+TGG + chr7_3:83973186-83973205 None:intergenic 25.0%
! GCAAATGATACAAAATTACT+AGG - chr7_3:83973516-83973535 Msa1131440:intron 25.0%
! TGATACAAAATTACTAGGAA+AGG - chr7_3:83973521-83973540 Msa1131440:intron 25.0%
! GATACAAAATTACTAGGAAA+GGG - chr7_3:83973522-83973541 Msa1131440:intron 25.0%
! AAGAAATAGAAGGTTAAAAG+AGG + chr7_3:83973694-83973713 None:intergenic 25.0%
!!! TTTTAACTGTGCTTAAATTG+GGG + chr7_3:83973755-83973774 None:intergenic 25.0%
!!! CTTTTAACTGTGCTTAAATT+GGG + chr7_3:83973756-83973775 None:intergenic 25.0%
! AACATTCCTAAAAATATGCA+GGG + chr7_3:83973779-83973798 None:intergenic 25.0%
!!! TATTTTTAGGAATGTTCACT+TGG - chr7_3:83973783-83973802 Msa1131440:intron 25.0%
! AATTCCAAAACCAAAATTTG+TGG + chr7_3:83973896-83973915 None:intergenic 25.0%
! AAATTCTTTCAAATTTCGGA+GGG + chr7_3:83973924-83973943 None:intergenic 25.0%
! CCACAAATTCTTTCAAATTT+CGG + chr7_3:83973928-83973947 None:intergenic 25.0%
! TGAAAATGTAAATTCACTAG+AGG - chr7_3:83975034-83975053 Msa1131440:intron 25.0%
! TAAATGTGAATCACATACAT+AGG + chr7_3:83975120-83975139 None:intergenic 25.0%
!!! ATGTTTTGAAGTTTTATCTG+TGG - chr7_3:83975144-83975163 Msa1131440:intron 25.0%
!! TTTAGAATCTGAAAACATAC+AGG + chr7_3:83975353-83975372 None:intergenic 25.0%
! AAATGATAGTTATTGGGATT+TGG - chr7_3:83975419-83975438 Msa1131440:intron 25.0%
! ATAGCTTAATACACTAATCA+TGG - chr7_3:83975488-83975507 Msa1131440:CDS 25.0%
!!! CATGGTTATCTTTGATTTTT+GGG + chr7_3:83975532-83975551 None:intergenic 25.0%
! TCAAACAATGCTACTAAAAT+CGG + chr7_3:83975850-83975869 None:intergenic 25.0%
! AGCATTGTTTGAGTAAATTA+AGG - chr7_3:83975858-83975877 Msa1131440:intron 25.0%
! AAACAGGGAAATATCTTATA+CGG + chr7_3:83976200-83976219 None:intergenic 25.0%
! TATTGAGAAAAAGGTAAACA+GGG + chr7_3:83976215-83976234 None:intergenic 25.0%
! ATATTGAGAAAAAGGTAAAC+AGG + chr7_3:83976216-83976235 None:intergenic 25.0%
!! TTGTCTTTTCTCTATTTAGA+TGG - chr7_3:83976357-83976376 Msa1131440:intron 25.0%
!! TGTCTTTTCTCTATTTAGAT+GGG - chr7_3:83976358-83976377 Msa1131440:intron 25.0%
! GTTGAAAGAAAATAACTTGA+AGG - chr7_3:83976423-83976442 Msa1131440:intron 25.0%
! AATAACTTGAAGGAAATTGA+AGG - chr7_3:83976433-83976452 Msa1131440:intron 25.0%
!!! TGATCTGCTGTTTTTTTAAA+AGG - chr7_3:83976514-83976533 Msa1131440:intron 25.0%
! TAGGAAAAAGAAATTAGACA+CGG - chr7_3:83977304-83977323 Msa1131440:intron 25.0%
! TATGATAAGCAAAAATTGAG+AGG + chr7_3:83977452-83977471 None:intergenic 25.0%
!!! ATTCTCATACCTATTTCTTT+TGG - chr7_3:83977614-83977633 Msa1131440:CDS 25.0%
!!! GGAGTTTTTTTTACAGTATA+TGG - chr7_3:83977773-83977792 Msa1131440:CDS 25.0%
! TCTCTTGATACTAGATAATT+TGG - chr7_3:83977973-83977992 Msa1131440:five_prime_UTR 25.0%
! CTCTTGATACTAGATAATTT+GGG - chr7_3:83977974-83977993 Msa1131440:five_prime_UTR 25.0%
!! TTTAACTTCAACAATTGTTG+TGG - chr7_3:83978012-83978031 Msa1131440:five_prime_UTR 25.0%
! TTAACTTCAACAATTGTTGT+GGG - chr7_3:83978013-83978032 Msa1131440:five_prime_UTR 25.0%
AATAGAGAGGTAAACGAATT+TGG + chr7_3:83972838-83972857 None:intergenic 30.0%
ATTATAATGAAGAGAAGGTG+AGG + chr7_3:83973083-83973102 None:intergenic 30.0%
AGAAATTAATTAAGCAGACC+TGG + chr7_3:83973265-83973284 None:intergenic 30.0%
TGCTTCTCTGAATAAATTGA+AGG + chr7_3:83973603-83973622 None:intergenic 30.0%
!! GAAATGAAGCTATTTCTACT+AGG + chr7_3:83973732-83973751 None:intergenic 30.0%
TTTAACTGTGCTTAAATTGG+GGG + chr7_3:83973754-83973773 None:intergenic 30.0%
!! GCTTTTAACTGTGCTTAAAT+TGG + chr7_3:83973757-83973776 None:intergenic 30.0%
! TAAAAGCCCTGCATATTTTT+AGG - chr7_3:83973770-83973789 Msa1131440:intron 30.0%
GAACATTCCTAAAAATATGC+AGG + chr7_3:83973780-83973799 None:intergenic 30.0%
AATTCTTTCAAATTTCGGAG+GGG + chr7_3:83973923-83973942 None:intergenic 30.0%
CAAATTCTTTCAAATTTCGG+AGG + chr7_3:83973925-83973944 None:intergenic 30.0%
CCGAAATTTGAAAGAATTTG+TGG - chr7_3:83973925-83973944 Msa1131440:CDS 30.0%
TTCAGATATTTGGTATTGCA+GGG + chr7_3:83974056-83974075 None:intergenic 30.0%
ATTCAGATATTTGGTATTGC+AGG + chr7_3:83974057-83974076 None:intergenic 30.0%
AGAATAAACCACCTTGAAAT+TGG - chr7_3:83974109-83974128 Msa1131440:CDS 30.0%
GAATAAACCACCTTGAAATT+GGG - chr7_3:83974110-83974129 Msa1131440:CDS 30.0%
AAAAAAGGAATAGCATATCC+CGG - chr7_3:83974252-83974271 Msa1131440:intron 30.0%
!!! TGCAGTTAGTTTTATTCCTT+AGG + chr7_3:83974285-83974304 None:intergenic 30.0%
AAGTTGGCATAATGGTTAAT+AGG + chr7_3:83974322-83974341 None:intergenic 30.0%
!! TTCTTTGAAACATCTATCTC+TGG - chr7_3:83974576-83974595 Msa1131440:intron 30.0%
CACAAAACAATGAAATCGAT+AGG + chr7_3:83974959-83974978 None:intergenic 30.0%
! AGATAATGGTATTAAGCATG+TGG - chr7_3:83975252-83975271 Msa1131440:intron 30.0%
!! CCATGGTTATCTTTGATTTT+TGG + chr7_3:83975533-83975552 None:intergenic 30.0%
CCAAAAATCAAAGATAACCA+TGG - chr7_3:83975530-83975549 Msa1131440:CDS 30.0%
CAAACAATGCTACTAAAATC+GGG + chr7_3:83975849-83975868 None:intergenic 30.0%
ATCAGACTTCTCAATTCAAT+GGG + chr7_3:83975886-83975905 None:intergenic 30.0%
!!! TTTTTTGTGTGAAGAAGTTC+TGG - chr7_3:83975958-83975977 Msa1131440:intron 30.0%
!!! CTCTTTTTTTCTGGTTTATG+TGG - chr7_3:83975996-83976015 Msa1131440:intron 30.0%
!!! TTTTTTTCTGGTTTATGTGG+AGG - chr7_3:83975999-83976018 Msa1131440:intron 30.0%
!!! TTTTTTCTGGTTTATGTGGA+GGG - chr7_3:83976000-83976019 Msa1131440:intron 30.0%
GAAATATCTTATACGGAAAG+AGG + chr7_3:83976193-83976212 None:intergenic 30.0%
! GTCTTTTCTCTATTTAGATG+GGG - chr7_3:83976359-83976378 Msa1131440:intron 30.0%
! CTGATAATTGAACACTTTTC+AGG - chr7_3:83976612-83976631 Msa1131440:intron 30.0%
! CCATTTTCTAATGCTAAATC+CGG - chr7_3:83976808-83976827 Msa1131440:intron 30.0%
TTTCTATAAGCATGTGAAGA+TGG - chr7_3:83977259-83977278 Msa1131440:intron 30.0%
AGGAAAAAGAAATTAGACAC+GGG - chr7_3:83977305-83977324 Msa1131440:intron 30.0%
AAATCAAGAATCCATACAAC+TGG + chr7_3:83977358-83977377 None:intergenic 30.0%
CAAGCATGACTATAAGTTAT+TGG - chr7_3:83977423-83977442 Msa1131440:intron 30.0%
TGAATGTAGCCAAAAGAAAT+AGG + chr7_3:83977626-83977645 None:intergenic 30.0%
TCGTCAAAAATATAGGTCAA+GGG + chr7_3:83977686-83977705 None:intergenic 30.0%
AGTTTCCTCGTCAAAAATAT+AGG + chr7_3:83977693-83977712 None:intergenic 30.0%
TCATACATGTGTTCCATTTA+TGG - chr7_3:83977752-83977771 Msa1131440:CDS 30.0%
! CTGCATTGATAACATCTTTA+GGG + chr7_3:83977825-83977844 None:intergenic 30.0%
! TCTGCATTGATAACATCTTT+AGG + chr7_3:83977826-83977845 None:intergenic 30.0%
! ATACTAGATAATTTGGGATG+CGG - chr7_3:83977980-83977999 Msa1131440:five_prime_UTR 30.0%
AATTAAAGACCCAACCAAAC+CGG - chr7_3:83972726-83972745 Msa1131440:three_prime_UTR 35.0%
!! AAGAACTTGATGATGAGTCT+CGG + chr7_3:83972882-83972901 None:intergenic 35.0%
ACAATTGACAATCCTTGAGA+AGG + chr7_3:83972994-83973013 None:intergenic 35.0%
TACACTGCAGATTTCAAACT+TGG - chr7_3:83973142-83973161 Msa1131440:intron 35.0%
AGATTTCAAACTTGGAAGTC+TGG - chr7_3:83973150-83973169 Msa1131440:intron 35.0%
TAACAATGTCTTTGGGTCTT+TGG + chr7_3:83973178-83973197 None:intergenic 35.0%
TTATCTGGAGATCTTGATCT+TGG - chr7_3:83973206-83973225 Msa1131440:intron 35.0%
CTCGATATACTCACTGAATT+TGG - chr7_3:83973239-83973258 Msa1131440:intron 35.0%
! CAATGTATGGGTTAATGAGA+AGG - chr7_3:83973331-83973350 Msa1131440:intron 35.0%
CAAAAAAGACTGCGAAGAAA+CGG + chr7_3:83973645-83973664 None:intergenic 35.0%
ATATGATACCACTGCTAATG+TGG + chr7_3:83973671-83973690 None:intergenic 35.0%
! GATGGTGAAGCAATTTTCAT+CGG - chr7_3:83973854-83973873 Msa1131440:intron 35.0%
! CAACTAGAGTCCACAAATTT+TGG - chr7_3:83973883-83973902 Msa1131440:CDS 35.0%
!!! GAGTCCACAAATTTTGGTTT+TGG - chr7_3:83973889-83973908 Msa1131440:CDS 35.0%
ATTCTTTCAAATTTCGGAGG+GGG + chr7_3:83973922-83973941 None:intergenic 35.0%
TATGCTTACTTGGTATTGCA+GGG + chr7_3:83974009-83974028 None:intergenic 35.0%
GTGAGGCAAATTCAGATATT+TGG + chr7_3:83974066-83974085 None:intergenic 35.0%
TGTGAATAGTCACTACTTAC+TGG + chr7_3:83974456-83974475 None:intergenic 35.0%
AGGGCATACAAAAAAGATTG+TGG + chr7_3:83974720-83974739 None:intergenic 35.0%
AAAGCAAAGTTGCATGATCA+GGG + chr7_3:83974739-83974758 None:intergenic 35.0%
AAAAGCAAAGTTGCATGATC+AGG + chr7_3:83974740-83974759 None:intergenic 35.0%
CAATTGCAGAACAATGTTCT+GGG - chr7_3:83974775-83974794 Msa1131440:intron 35.0%
! TGATTGTCGTTTATCCATTG+CGG - chr7_3:83974892-83974911 Msa1131440:intron 35.0%
TTGTTTCAGATTCCGCAATA+TGG - chr7_3:83975005-83975024 Msa1131440:intron 35.0%
GATAGTTATTGGGATTTGGA+AGG - chr7_3:83975423-83975442 Msa1131440:intron 35.0%
GAAGATACATTCTACCTTGT+TGG - chr7_3:83975609-83975628 Msa1131440:intron 35.0%
! CTACCTTGTTGGTTAATTTG+TGG - chr7_3:83975620-83975639 Msa1131440:intron 35.0%
TAGCCACAAATTAACCAACA+AGG + chr7_3:83975626-83975645 None:intergenic 35.0%
! TCCCATCTATATTTTCTCAC+CGG - chr7_3:83975783-83975802 Msa1131440:intron 35.0%
TCCGGTGAGAAAATATAGAT+GGG + chr7_3:83975787-83975806 None:intergenic 35.0%
TTCCGGTGAGAAAATATAGA+TGG + chr7_3:83975788-83975807 None:intergenic 35.0%
TCAGACTTCTCAATTCAATG+GGG + chr7_3:83975885-83975904 None:intergenic 35.0%
GATCAGACTTCTCAATTCAA+TGG + chr7_3:83975887-83975906 None:intergenic 35.0%
!!! TTTTTCTGGTTTATGTGGAG+GGG - chr7_3:83976001-83976020 Msa1131440:intron 35.0%
! TTGAGTCTGTGTTTTACGAT+TGG - chr7_3:83976038-83976057 Msa1131440:intron 35.0%
! TGAGTCTGTGTTTTACGATT+GGG - chr7_3:83976039-83976058 Msa1131440:intron 35.0%
AAAAGGTCAACTCCAACATA+TGG + chr7_3:83976317-83976336 None:intergenic 35.0%
AACTTGAAGGAAATTGAAGG+TGG - chr7_3:83976436-83976455 Msa1131440:intron 35.0%
! AATTGAAGGTGGAACTGTTT+TGG - chr7_3:83976447-83976466 Msa1131440:intron 35.0%
!!! TAAGCATACCTTGTCGTTTT+TGG - chr7_3:83976582-83976601 Msa1131440:intron 35.0%
AAATCATTGATCGGACGAAA+AGG - chr7_3:83976655-83976674 Msa1131440:intron 35.0%
TGAGATGCTTGAAAGATTAG+AGG - chr7_3:83976696-83976715 Msa1131440:intron 35.0%
ACAAAGAGAGAGGAAAAAAC+TGG + chr7_3:83976787-83976806 None:intergenic 35.0%
AGAAAATGGAACAAAGAGAG+AGG + chr7_3:83976797-83976816 None:intergenic 35.0%
CCGGATTTAGCATTAGAAAA+TGG + chr7_3:83976811-83976830 None:intergenic 35.0%
CCTAAAATGAATTAGGGTTG+GGG + chr7_3:83976942-83976961 None:intergenic 35.0%
CCCTAAAATGAATTAGGGTT+GGG + chr7_3:83976943-83976962 None:intergenic 35.0%
! CCCAACCCTAATTCATTTTA+GGG - chr7_3:83976940-83976959 Msa1131440:intron 35.0%
! CCAACCCTAATTCATTTTAG+GGG - chr7_3:83976941-83976960 Msa1131440:intron 35.0%
TCCTCCCCTAAAATGAATTA+GGG + chr7_3:83976948-83976967 None:intergenic 35.0%
ATCCTCCCCTAAAATGAATT+AGG + chr7_3:83976949-83976968 None:intergenic 35.0%
GCAGAAAGCAAATACAGAAA+GGG + chr7_3:83976977-83976996 None:intergenic 35.0%
TGCAGAAAGCAAATACAGAA+AGG + chr7_3:83976978-83976997 None:intergenic 35.0%
GAGACTCTTAAAATTAGGAG+TGG + chr7_3:83977059-83977078 None:intergenic 35.0%
CAAGGGAGACTCTTAAAATT+AGG + chr7_3:83977064-83977083 None:intergenic 35.0%
ATGCAAAGAAACCAGTTGTA+TGG - chr7_3:83977344-83977363 Msa1131440:intron 35.0%
AACAACAACAACAACAACCA+AGG - chr7_3:83977490-83977509 Msa1131440:intron 35.0%
TACATTCATGTGATGCAGAT+TGG - chr7_3:83977638-83977657 Msa1131440:intron 35.0%
CTCGTCAAAAATATAGGTCA+AGG + chr7_3:83977687-83977706 None:intergenic 35.0%
!! CTTGACCTATATTTTTGACG+AGG - chr7_3:83977685-83977704 Msa1131440:intron 35.0%
ACTAAAGCCCAAGTTTAGAA+AGG + chr7_3:83977733-83977752 None:intergenic 35.0%
! TGATAACATCTTTAGGGAGA+GGG + chr7_3:83977819-83977838 None:intergenic 35.0%
! TTGATAACATCTTTAGGGAG+AGG + chr7_3:83977820-83977839 None:intergenic 35.0%
! CTTCATTTGTTGCTCGATAA+CGG - chr7_3:83977871-83977890 Msa1131440:CDS 35.0%
TTGTTGTGGGAGTTAAAGTA+TGG - chr7_3:83978026-83978045 Msa1131440:five_prime_UTR 35.0%
ATTAAAGACCCAACCAAACC+GGG - chr7_3:83972727-83972746 Msa1131440:three_prime_UTR 40.0%
AATGACAACACAATCTCCTC+CGG - chr7_3:83972902-83972921 Msa1131440:three_prime_UTR 40.0%
GAAGACATACGACCTTTACT+GGG + chr7_3:83972959-83972978 None:intergenic 40.0%
AGAAGACATACGACCTTTAC+TGG + chr7_3:83972960-83972979 None:intergenic 40.0%
TTGTCAATTGTCAGTCAAGC+AGG - chr7_3:83973003-83973022 Msa1131440:three_prime_UTR 40.0%
GATCTTGATCTTGGTATCGT+CGG - chr7_3:83973215-83973234 Msa1131440:intron 40.0%
TATACTCACTGAATTTGGCC+AGG - chr7_3:83973244-83973263 Msa1131440:intron 40.0%
GAGAAGGAGTAGATTCATTG+CGG - chr7_3:83973347-83973366 Msa1131440:intron 40.0%
AGAAGGAGTAGATTCATTGC+GGG - chr7_3:83973348-83973367 Msa1131440:intron 40.0%
!! TCTATGCGACTTGTTACTGA+TGG - chr7_3:83973836-83973855 Msa1131440:intron 40.0%
CTATGCTTACTTGGTATTGC+AGG + chr7_3:83974010-83974029 None:intergenic 40.0%
AAGGTGGTTTATTCTTCGTG+TGG + chr7_3:83974104-83974123 None:intergenic 40.0%
GAAGATTCATGTTTGCGGTT+GGG + chr7_3:83974147-83974166 None:intergenic 40.0%
CATCGGAAGATTCATGTTTG+CGG + chr7_3:83974152-83974171 None:intergenic 40.0%
AATCTTCCGATGCTTTGACA+AGG - chr7_3:83974160-83974179 Msa1131440:intron 40.0%
AAACCATGATGAGCTTCAAG+TGG + chr7_3:83974194-83974213 None:intergenic 40.0%
TTATTCCTTAGGTGCAGAAC+CGG + chr7_3:83974274-83974293 None:intergenic 40.0%
! ATGTTTGATGTCGCTTCACT+GGG + chr7_3:83974346-83974365 None:intergenic 40.0%
! AATGTTTGATGTCGCTTCAC+TGG + chr7_3:83974347-83974366 None:intergenic 40.0%
ACGACTAGCATCCTCAATTT+CGG + chr7_3:83974518-83974537 None:intergenic 40.0%
ACATCTATCTCTGGTCATCA+TGG - chr7_3:83974585-83974604 Msa1131440:intron 40.0%
!! ATGCAACTTTGCTTTTCCCT+CGG - chr7_3:83974744-83974763 Msa1131440:intron 40.0%
TGCAATTGCATTTAAGCCGA+GGG + chr7_3:83974763-83974782 None:intergenic 40.0%
GCAATTGCAGAACAATGTTC+TGG - chr7_3:83974774-83974793 Msa1131440:intron 40.0%
GATCTTCATTGCCCTGATAA+AGG + chr7_3:83974841-83974860 None:intergenic 40.0%
GTAATTTCAACTCACCGCAA+TGG + chr7_3:83974909-83974928 None:intergenic 40.0%
! ATTGCGGAATCTGAAACAAC+AGG + chr7_3:83975004-83975023 None:intergenic 40.0%
AGCTAGCAAAAATGCCTCAA+TGG - chr7_3:83975057-83975076 Msa1131440:intron 40.0%
TTTCCTTCTTACTCTTCAGC+TGG - chr7_3:83975213-83975232 Msa1131440:intron 40.0%
TTCCTTCTTACTCTTCAGCT+GGG - chr7_3:83975214-83975233 Msa1131440:intron 40.0%
ACCATGGCGTTAATGTCTAA+CGG - chr7_3:83975546-83975565 Msa1131440:intron 40.0%
!! GTGAAGAAGTTCTGGTTTCT+TGG - chr7_3:83975966-83975985 Msa1131440:intron 40.0%
!!! GGCATTGTGCTCTTTTTTTC+TGG - chr7_3:83975987-83976006 Msa1131440:intron 40.0%
!!! TTTTCTGGTTTATGTGGAGG+GGG - chr7_3:83976002-83976021 Msa1131440:intron 40.0%
TCACTAAGAGCAGAGTTCAA+TGG + chr7_3:83976080-83976099 None:intergenic 40.0%
ATCTTGGACCTTGTAAGTAG+TGG - chr7_3:83976394-83976413 Msa1131440:intron 40.0%
ACGTTGTTCCACTACTTACA+AGG + chr7_3:83976405-83976424 None:intergenic 40.0%
!!! TGGAACTGTTTTGGAAAGTC+AGG - chr7_3:83976456-83976475 Msa1131440:intron 40.0%
ACAGCAGATCATGCTAGTTA+GGG + chr7_3:83976505-83976524 None:intergenic 40.0%
AACAGCAGATCATGCTAGTT+AGG + chr7_3:83976506-83976525 None:intergenic 40.0%
!!! CTGTTTTTTTAAAAGGCGCC+TGG - chr7_3:83976521-83976540 Msa1131440:intron 40.0%
!!! TTTTAAAAGGCGCCTGGAAA+AGG - chr7_3:83976527-83976546 Msa1131440:intron 40.0%
GAGTGAAACCAAAAACGACA+AGG + chr7_3:83976593-83976612 None:intergenic 40.0%
GCAAGCAGGAAATCATTGAT+CGG - chr7_3:83976646-83976665 Msa1131440:intron 40.0%
! AAAGATTAGAGGCACATCTG+AGG - chr7_3:83976707-83976726 Msa1131440:intron 40.0%
! AAGATTAGAGGCACATCTGA+GGG - chr7_3:83976708-83976727 Msa1131440:intron 40.0%
TTTCTAATGCTAAATCCGGC+AGG - chr7_3:83976812-83976831 Msa1131440:intron 40.0%
! CCCCAACCCTAATTCATTTT+AGG - chr7_3:83976939-83976958 Msa1131440:intron 40.0%
CCCCTAAAATGAATTAGGGT+TGG + chr7_3:83976944-83976963 None:intergenic 40.0%
!! ACCCTAATTCATTTTAGGGG+AGG - chr7_3:83976944-83976963 Msa1131440:intron 40.0%
CTACTCACTATCACAATGCA+TGG + chr7_3:83977020-83977039 None:intergenic 40.0%
TCCCTTGATTGTCTATCTAC+AGG - chr7_3:83977077-83977096 Msa1131440:intron 40.0%
CCCTGTAGATAGACAATCAA+GGG + chr7_3:83977081-83977100 None:intergenic 40.0%
CCCTTGATTGTCTATCTACA+GGG - chr7_3:83977078-83977097 Msa1131440:intron 40.0%
TCCCTGTAGATAGACAATCA+AGG + chr7_3:83977082-83977101 None:intergenic 40.0%
CAGAAAACAGGACTTACTGT+GGG + chr7_3:83977105-83977124 None:intergenic 40.0%
TGAAGATGGTTGTGAGCTAA+TGG - chr7_3:83977273-83977292 Msa1131440:intron 40.0%
GAAGATGGTTGTGAGCTAAT+GGG - chr7_3:83977274-83977293 Msa1131440:intron 40.0%
AAGATGGTTGTGAGCTAATG+GGG - chr7_3:83977275-83977294 Msa1131440:intron 40.0%
ATTAGACACGGGTGTTTGAA+TGG - chr7_3:83977316-83977335 Msa1131440:intron 40.0%
TTAGACACGGGTGTTTGAAT+GGG - chr7_3:83977317-83977336 Msa1131440:intron 40.0%
ATTCATGTGATGCAGATTGG+AGG - chr7_3:83977641-83977660 Msa1131440:intron 40.0%
GTCAGCTCCTTTCTAAACTT+GGG - chr7_3:83977723-83977742 Msa1131440:intron 40.0%
! GATAACATCTTTAGGGAGAG+GGG + chr7_3:83977818-83977837 None:intergenic 40.0%
ATACAAACTGATGCAGAGGT+GGG + chr7_3:83977905-83977924 None:intergenic 40.0%
CAACATACAAACTGATGCAG+AGG + chr7_3:83977909-83977928 None:intergenic 40.0%
TTAAAGACCCAACCAAACCG+GGG - chr7_3:83972728-83972747 Msa1131440:three_prime_UTR 45.0%
ATCATCGTCAACATTGCTGC+AGG + chr7_3:83972812-83972831 None:intergenic 45.0%
!! AACTTGATGATGAGTCTCGG+AGG + chr7_3:83972879-83972898 None:intergenic 45.0%
AGAAGACAAGAGATCCGTCT+GGG - chr7_3:83972929-83972948 Msa1131440:three_prime_UTR 45.0%
CTTTACTGGGTAAACCCAGA+CGG + chr7_3:83972946-83972965 None:intergenic 45.0%
TGATACACTCGACCTTCTCA+AGG - chr7_3:83972979-83972998 Msa1131440:three_prime_UTR 45.0%
ATTTGGGCAACATACTGACG+TGG + chr7_3:83973034-83973053 None:intergenic 45.0%
GTATGTTGCCCAAATTCCTC+AGG - chr7_3:83973039-83973058 Msa1131440:CDS 45.0%
GAAGGAGTAGATTCATTGCG+GGG - chr7_3:83973349-83973368 Msa1131440:intron 45.0%
TGTAGCGTAGGCTATGTAAC+CGG + chr7_3:83973492-83973511 None:intergenic 45.0%
TACATAGCCTACGCTACATG+TGG - chr7_3:83973494-83973513 Msa1131440:intron 45.0%
TCATTTGCCACATGTAGCGT+AGG + chr7_3:83973504-83973523 None:intergenic 45.0%
! TTTTGCTGCCACATTAGCAG+TGG - chr7_3:83973660-83973679 Msa1131440:CDS 45.0%
CAGTAACAAGTCGCATAGAG+AGG + chr7_3:83973835-83973854 None:intergenic 45.0%
GGTTTCGAGCTAAGATAGTG+AGG + chr7_3:83974083-83974102 None:intergenic 45.0%
CTAGAGGACTCCCAATTTCA+AGG + chr7_3:83974123-83974142 None:intergenic 45.0%
GGAAGATTCATGTTTGCGGT+TGG + chr7_3:83974148-83974167 None:intergenic 45.0%
TTACCGCCTTGTCAAAGCAT+CGG + chr7_3:83974169-83974188 None:intergenic 45.0%
ACTCCACTTGAAGCTCATCA+TGG - chr7_3:83974188-83974207 Msa1131440:intron 45.0%
TATTCCTTAGGTGCAGAACC+GGG + chr7_3:83974273-83974292 None:intergenic 45.0%
CACTGGGAAAGTTGGCATAA+TGG + chr7_3:83974330-83974349 None:intergenic 45.0%
! CACTACTTACTGGTCTCAGT+AGG + chr7_3:83974446-83974465 None:intergenic 45.0%
CTCTGATGAGTCCGAAATTG+AGG - chr7_3:83974504-83974523 Msa1131440:intron 45.0%
TTGTGTGCTTTAGCCCTGAT+CGG - chr7_3:83974644-83974663 Msa1131440:intron 45.0%
CTGCAATTGCATTTAAGCCG+AGG + chr7_3:83974764-83974783 None:intergenic 45.0%
AGATCTTATCGTTGTCCACG+AGG - chr7_3:83974856-83974875 Msa1131440:intron 45.0%
GGCTTATCTTCTGTCCATTG+AGG + chr7_3:83975074-83975093 None:intergenic 45.0%
CAAACACTATCTCTTACCGC+AGG + chr7_3:83975313-83975332 None:intergenic 45.0%
ACATGGCACATAGAGCTTTC+CGG + chr7_3:83975805-83975824 None:intergenic 45.0%
TTCACAAATGCCGGTCAACA+TGG + chr7_3:83975822-83975841 None:intergenic 45.0%
!! TTTCTGGTTTATGTGGAGGG+GGG - chr7_3:83976003-83976022 Msa1131440:intron 45.0%
! TGTTTTACGATTGGGTCCCA+AGG - chr7_3:83976047-83976066 Msa1131440:intron 45.0%
CAGCATCAATGAGATGGTGA+CGG + chr7_3:83976291-83976310 None:intergenic 45.0%
TTGATGCTGCTGCCATATGT+TGG - chr7_3:83976302-83976321 Msa1131440:intron 45.0%
AAAAAACTGGTGAGGAGACG+AGG + chr7_3:83976774-83976793 None:intergenic 45.0%
GAGAGAGGAAAAAACTGGTG+AGG + chr7_3:83976782-83976801 None:intergenic 45.0%
! TCATGTTTGCTACAACCTGC+CGG + chr7_3:83976830-83976849 None:intergenic 45.0%
CAGGTTGTAGCAAACATGAG+AGG - chr7_3:83976831-83976850 Msa1131440:intron 45.0%
GCAGAAAACAGGACTTACTG+TGG + chr7_3:83977106-83977125 None:intergenic 45.0%
CTTGGGCACACATATGACTA+TGG + chr7_3:83977163-83977182 None:intergenic 45.0%
AGTCATATGTGTGCCCAAGA+AGG - chr7_3:83977164-83977183 Msa1131440:intron 45.0%
GACTTGTACAGTGCCTTCTT+GGG + chr7_3:83977180-83977199 None:intergenic 45.0%
AGACTTGTACAGTGCCTTCT+TGG + chr7_3:83977181-83977200 None:intergenic 45.0%
GTCTATACAGCAACTGAGAG+CGG - chr7_3:83977197-83977216 Msa1131440:intron 45.0%
TGAGCTAATGGGGCTAACTT+AGG - chr7_3:83977285-83977304 Msa1131440:intron 45.0%
CAAGGCTTATCCCACTAAGT+GGG - chr7_3:83977508-83977527 Msa1131440:intron 45.0%
AAGGCTTATCCCACTAAGTG+GGG - chr7_3:83977509-83977528 Msa1131440:intron 45.0%
TTGACGAGGAAACTCCTAGA+TGG - chr7_3:83977699-83977718 Msa1131440:intron 45.0%
CGTCAGCTCCTTTCTAAACT+TGG - chr7_3:83977722-83977741 Msa1131440:intron 45.0%
! CATTTGTTGCTCGATAACGG+AGG - chr7_3:83977874-83977893 Msa1131440:CDS 45.0%
CATACAAACTGATGCAGAGG+TGG + chr7_3:83977906-83977925 None:intergenic 45.0%
AGTGTTCGATTGAGACACCC+CGG + chr7_3:83972748-83972767 None:intergenic 50.0%
GATGGCGAAGCTAAAGTCTG+TGG + chr7_3:83972774-83972793 None:intergenic 50.0%
ATCGTCAACATTGCTGCAGG+AGG + chr7_3:83972809-83972828 None:intergenic 50.0%
ATGAGTCTCGGAGGAGATTG+AGG + chr7_3:83972870-83972889 None:intergenic 50.0%
GATCTCTTGTCTTCTGCTGC+CGG + chr7_3:83972924-83972943 None:intergenic 50.0%
CAGAAGACAAGAGATCCGTC+TGG - chr7_3:83972928-83972947 Msa1131440:three_prime_UTR 50.0%
CGTCTGGGTTTACCCAGTAA+AGG - chr7_3:83972944-83972963 Msa1131440:three_prime_UTR 50.0%
GCGAAGAAACGGAAACGAGA+AGG + chr7_3:83973634-83973653 None:intergenic 50.0%
GAGGACTCCCAATTTCAAGG+TGG + chr7_3:83974120-83974139 None:intergenic 50.0%
ATGTTTGCGGTTGGGTCTAG+AGG + chr7_3:83974139-83974158 None:intergenic 50.0%
CTTCCGATGCTTTGACAAGG+CGG - chr7_3:83974163-83974182 Msa1131440:intron 50.0%
ATATCCCGGTTCTGCACCTA+AGG - chr7_3:83974266-83974285 Msa1131440:intron 50.0%
! TGTCGCTTCACTGGGAAAGT+TGG + chr7_3:83974338-83974357 None:intergenic 50.0%
TTCGGACTCATCAGAGCTGT+GGG + chr7_3:83974500-83974519 None:intergenic 50.0%
TTTCGGACTCATCAGAGCTG+TGG + chr7_3:83974501-83974520 None:intergenic 50.0%
TATCGTTGTCCACGAGGCTT+TGG - chr7_3:83974862-83974881 Msa1131440:intron 50.0%
AATCCAGTTGCAACTCGCAG+AGG + chr7_3:83975095-83975114 None:intergenic 50.0%
GACCCAGCTGAAGAGTAAGA+AGG + chr7_3:83975219-83975238 None:intergenic 50.0%
! GTGGCATTTTCGACTGCTGA+CGG - chr7_3:83975271-83975290 Msa1131440:intron 50.0%
GCCGTTAGACATTAACGCCA+TGG + chr7_3:83975550-83975569 None:intergenic 50.0%
GCTCTATGTGCCATGTTGAC+CGG - chr7_3:83975809-83975828 Msa1131440:intron 50.0%
TCGGGAACGTTCACAAATGC+CGG + chr7_3:83975831-83975850 None:intergenic 50.0%
GTTCAATGGCAACAGGCCTT+GGG + chr7_3:83976066-83976085 None:intergenic 50.0%
AGTTCAATGGCAACAGGCCT+TGG + chr7_3:83976067-83976086 None:intergenic 50.0%
GAGCAGAGTTCAATGGCAAC+AGG + chr7_3:83976073-83976092 None:intergenic 50.0%
TGGCAGCAGCATCAATGAGA+TGG + chr7_3:83976297-83976316 None:intergenic 50.0%
GGGGATTGCTGATGCTATCT+TGG - chr7_3:83976378-83976397 Msa1131440:intron 50.0%
! CATGAGAAGCAGCCTTTTCC+AGG + chr7_3:83976542-83976561 None:intergenic 50.0%
GGCTGCTTCTCATGTCTTGT+TGG - chr7_3:83976548-83976567 Msa1131440:intron 50.0%
CATGAGAGGAAGTAGTGCAG+AGG - chr7_3:83976845-83976864 Msa1131440:intron 50.0%
AGGAAGTAGTGCAGAGGAAG+TGG - chr7_3:83976851-83976870 Msa1131440:intron 50.0%
TGAGCCAACCATCGTTAGCT+GGG - chr7_3:83976886-83976905 Msa1131440:intron 50.0%
CTGGGTTGCAGGTGTGATAT+GGG - chr7_3:83976904-83976923 Msa1131440:intron 50.0%
TTTCTGCAAGCGCGATGGAA+AGG - chr7_3:83977119-83977138 Msa1131440:intron 50.0%
CCACTTAGTGGGATAAGCCT+TGG + chr7_3:83977510-83977529 None:intergenic 50.0%
CCAAGGCTTATCCCACTAAG+TGG - chr7_3:83977507-83977526 Msa1131440:intron 50.0%
CTTATCCCACTAAGTGGGGT+CGG - chr7_3:83977513-83977532 Msa1131440:intron 50.0%
AAGTGGGGTCGGCATTCAAA+TGG - chr7_3:83977524-83977543 Msa1131440:CDS 50.0%
!! TGAGACACCCCGGTTTGGTT+GGG + chr7_3:83972738-83972757 None:intergenic 55.0%
!! TTGAGACACCCCGGTTTGGT+TGG + chr7_3:83972739-83972758 None:intergenic 55.0%
TCGATTGAGACACCCCGGTT+TGG + chr7_3:83972743-83972762 None:intergenic 55.0%
AGGAGGAACGACGCTGATGA+TGG + chr7_3:83972792-83972811 None:intergenic 55.0%
GAGGCGTAGCAGCAATAGAG+AGG + chr7_3:83972851-83972870 None:intergenic 55.0%
TGTGCTTTAGCCCTGATCGG+CGG - chr7_3:83974647-83974666 Msa1131440:intron 55.0%
GCAAGTAGAACCGCCGATCA+GGG + chr7_3:83974660-83974679 None:intergenic 55.0%
!! GTCCACGAGGCTTTGGAGTA+CGG - chr7_3:83974869-83974888 Msa1131440:intron 55.0%
AAGCCTCTGCGAGTTGCAAC+TGG - chr7_3:83975089-83975108 Msa1131440:intron 55.0%
AGGCTGCTCTTGTTGCAAGC+AGG - chr7_3:83976632-83976651 Msa1131440:intron 55.0%
! AGAGGCACATCTGAGGGCTA+TGG - chr7_3:83976714-83976733 Msa1131440:intron 55.0%
GAGGCACATCTGAGGGCTAT+GGG - chr7_3:83976715-83976734 Msa1131440:intron 55.0%
AGGCACATCTGAGGGCTATG+GGG - chr7_3:83976716-83976735 Msa1131440:intron 55.0%
CTGAGCCAACCATCGTTAGC+TGG - chr7_3:83976885-83976904 Msa1131440:intron 55.0%
GCAACCCAGCTAACGATGGT+TGG + chr7_3:83976893-83976912 None:intergenic 55.0%
ACCATCGTTAGCTGGGTTGC+AGG - chr7_3:83976893-83976912 Msa1131440:intron 55.0%
ACCTGCAACCCAGCTAACGA+TGG + chr7_3:83976897-83976916 None:intergenic 55.0%
GCTGGGTTGCAGGTGTGATA+TGG - chr7_3:83976903-83976922 Msa1131440:intron 55.0%
CCATCGCGCTTGCAGAAAAC+AGG + chr7_3:83977117-83977136 None:intergenic 55.0%
! CCTGTTTTCTGCAAGCGCGA+TGG - chr7_3:83977114-83977133 Msa1131440:intron 55.0%
GTCATGCTTGCCATCGCCAA+GGG + chr7_3:83977413-83977432 None:intergenic 55.0%
AGTCATGCTTGCCATCGCCA+AGG + chr7_3:83977414-83977433 None:intergenic 55.0%
GAATGCCGACCCCACTTAGT+GGG + chr7_3:83977521-83977540 None:intergenic 55.0%
TGAATGCCGACCCCACTTAG+TGG + chr7_3:83977522-83977541 None:intergenic 55.0%
GTGATGCAGATTGGAGGCAG+CGG - chr7_3:83977647-83977666 Msa1131440:intron 55.0%
GAAAGGAGCTGACGCCATCT+AGG + chr7_3:83977716-83977735 None:intergenic 55.0%
CTCTTGTCTTCTGCTGCCGG+AGG + chr7_3:83972921-83972940 None:intergenic 60.0%
CGCAAGTAGAACCGCCGATC+AGG + chr7_3:83974661-83974680 None:intergenic 60.0%
CACCGTACTCCAAAGCCTCG+TGG + chr7_3:83974874-83974893 None:intergenic 60.0%
TTCGACTGCTGACGGAGCAC+TGG - chr7_3:83975279-83975298 Msa1131440:intron 60.0%
GAGGGCTATGGGGCAGTTCA+CGG - chr7_3:83976726-83976745 Msa1131440:intron 60.0%
ACTCCCTGACCTGTTGCCCT+TGG - chr7_3:83977394-83977413 Msa1131440:intron 60.0%
TCGCCAAGGGCAACAGGTCA+GGG + chr7_3:83977400-83977419 None:intergenic 60.0%
ATCGCCAAGGGCAACAGGTC+AGG + chr7_3:83977401-83977420 None:intergenic 60.0%
TGACCTGTTGCCCTTGGCGA+TGG - chr7_3:83977400-83977419 Msa1131440:intron 60.0%
TTGCCATCGCCAAGGGCAAC+AGG + chr7_3:83977406-83977425 None:intergenic 60.0%
!! GACTGCTGACGGAGCACTGG+AGG - chr7_3:83975282-83975301 Msa1131440:intron 65.0%
! AGCACTGGAGGCAGCTCCTG+CGG - chr7_3:83975294-83975313 Msa1131440:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 83972699 83978090 83972699 ID=Msa1131440;Name=Msa1131440
chr7_3 mRNA 83972699 83978090 83972699 ID=Msa1131440-mRNA-1;Parent=Msa1131440;Name=Msa1131440-mRNA-1;_AED=0.15;_eAED=0.15;_QI=119|1|1|1|1|1|10|339|375
chr7_3 exon 83972699 83973133 83972699 ID=Msa1131440-mRNA-1:exon:24957;Parent=Msa1131440-mRNA-1
chr7_3 exon 83973571 83973690 83973571 ID=Msa1131440-mRNA-1:exon:24956;Parent=Msa1131440-mRNA-1
chr7_3 exon 83973875 83973955 83973875 ID=Msa1131440-mRNA-1:exon:24955;Parent=Msa1131440-mRNA-1
chr7_3 exon 83974042 83974155 83974042 ID=Msa1131440-mRNA-1:exon:24954;Parent=Msa1131440-mRNA-1
chr7_3 exon 83974312 83974413 83974312 ID=Msa1131440-mRNA-1:exon:24953;Parent=Msa1131440-mRNA-1
chr7_3 exon 83975474 83975557 83975474 ID=Msa1131440-mRNA-1:exon:24952;Parent=Msa1131440-mRNA-1
chr7_3 exon 83975668 83975775 83975668 ID=Msa1131440-mRNA-1:exon:24951;Parent=Msa1131440-mRNA-1
chr7_3 exon 83975876 83975941 83975876 ID=Msa1131440-mRNA-1:exon:24950;Parent=Msa1131440-mRNA-1
chr7_3 exon 83977524 83977637 83977524 ID=Msa1131440-mRNA-1:exon:24949;Parent=Msa1131440-mRNA-1
chr7_3 exon 83977729 83978090 83977729 ID=Msa1131440-mRNA-1:exon:24948;Parent=Msa1131440-mRNA-1
chr7_3 five_prime_UTR 83977972 83978090 83977972 ID=Msa1131440-mRNA-1:five_prime_utr;Parent=Msa1131440-mRNA-1
chr7_3 CDS 83977729 83977971 83977729 ID=Msa1131440-mRNA-1:cds;Parent=Msa1131440-mRNA-1
chr7_3 CDS 83977524 83977637 83977524 ID=Msa1131440-mRNA-1:cds;Parent=Msa1131440-mRNA-1
chr7_3 CDS 83975876 83975941 83975876 ID=Msa1131440-mRNA-1:cds;Parent=Msa1131440-mRNA-1
chr7_3 CDS 83975668 83975775 83975668 ID=Msa1131440-mRNA-1:cds;Parent=Msa1131440-mRNA-1
chr7_3 CDS 83975474 83975557 83975474 ID=Msa1131440-mRNA-1:cds;Parent=Msa1131440-mRNA-1
chr7_3 CDS 83974312 83974413 83974312 ID=Msa1131440-mRNA-1:cds;Parent=Msa1131440-mRNA-1
chr7_3 CDS 83974042 83974155 83974042 ID=Msa1131440-mRNA-1:cds;Parent=Msa1131440-mRNA-1
chr7_3 CDS 83973875 83973955 83973875 ID=Msa1131440-mRNA-1:cds;Parent=Msa1131440-mRNA-1
chr7_3 CDS 83973571 83973690 83973571 ID=Msa1131440-mRNA-1:cds;Parent=Msa1131440-mRNA-1
chr7_3 CDS 83973038 83973133 83973038 ID=Msa1131440-mRNA-1:cds;Parent=Msa1131440-mRNA-1
chr7_3 three_prime_UTR 83972699 83973037 83972699 ID=Msa1131440-mRNA-1:three_prime_utr;Parent=Msa1131440-mRNA-1
Gene Sequence

>Msa1131440

ATGTTGACGATGATGAGCCAAATTCGTTTACCTCTCTATTGCTGCTACGCCTCAATCTCCTCCGAGACTCATCATCAAGTTCTTAATGACAACACAATCTCCTCCGGCAGCAGAAGACAAGAGATCCGTCTGGGTTTACCCAGTAAAGGTCGTATGTCTTCTGATACACTCGACCTTCTCAAGGATTGTCAATTGTCAGTCAAGCAGGTCAATCCACGTCAGTATGTTGCCCAAATTCCTCAGATTTCAAACTTGGAAGTCTGGTTCCAAAGACCCAAAGACATTGTTAGAAAATTGTTATCTGGAGATCTTGATCTTGGTATCGTCGGACTCGATATACTCACTGAATTTGGCCAGGGCAATGAAGATCTTATCGTTGTCCACGAGGCTTTGGAGTACGGTGATTGTCGTTTATCCATTGCGATTCCGCAATATGGAATATTTGAAAATGTAAATTCACTAGAGGAGCTAGCAAAAATGCCTCAATGGACAGAAGATAAGCCTCTGCGAGTTGCAACTGGATTCACCTATCTGGGTCCTAAATTTATGAAAGATAATGGTATTAAGCATGTGGCATTTTCGACTGCTGACGGAGCACTGGAGGCAGCTCCTGCGATGGGGATTGCTGATGCTATCTTGGACCTTGTAAGTAGTGGAACAACGTTGAAAGAAAATAACTTGAAGGAAATTGAAGGTGGAACTGTTTTGGAAAGTCAGGCTGCTCTTGTTGCAAGCAGGAAATCATTGATCGGACGAAAAGGAGTACTTGAAACAACTCATGAGATGCTTGAAAGATTAGAGGCACATCTGAGGGCTATGGGGCAGTTCACGGTTGTAGCAAACATGAGAGGAAGTAGTGCAGAGGAAGTGGCTGAGAGAGTACTGAGCCAACCATCGTTAGCTGGGTTGCAGGGACCCACAGTAAGTCCTGTTTTCTGCAAGCGCGATGGAAAGGTATCAGCAGACTACTATGCCATAGTCATATGTGTGCCCAAGAAGGCACTGTACAAGTCTATACAGCAACTGAGAGCGATTGGAGGCAGCGGAGTTCTTGTATCACCCTTGACCTATATTTTTGACGAGGAAACTCCTAGATGGCGTCAGCTCCTTTCTAAACTTGGGCTTTAG

Protein sequence

>Msa1131440

MLTMMSQIRLPLYCCYASISSETHHQVLNDNTISSGSRRQEIRLGLPSKGRMSSDTLDLLKDCQLSVKQVNPRQYVAQIPQISNLEVWFQRPKDIVRKLLSGDLDLGIVGLDILTEFGQGNEDLIVVHEALEYGDCRLSIAIPQYGIFENVNSLEELAKMPQWTEDKPLRVATGFTYLGPKFMKDNGIKHVAFSTADGALEAAPAMGIADAILDLVSSGTTLKENNLKEIEGGTVLESQAALVASRKSLIGRKGVLETTHEMLERLEAHLRAMGQFTVVANMRGSSAEEVAERVLSQPSLAGLQGPTVSPVFCKRDGKVSADYYAIVICVPKKALYKSIQQLRAIGGSGVLVSPLTYIFDEETPRWRQLLSKLGL*