Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1264770 | XP_013458571.1 | 98.600 | 500 | 7 | 0 | 1 | 500 | 1 | 500 | 0.0 | 1026 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1264770 | sp|Q3V384|AFG1L_MOUSE | 40.097 | 414 | 214 | 10 | 85 | 480 | 74 | 471 | 8.20e-83 | 267 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1264770 | A0A072USG5 | 98.600 | 500 | 7 | 0 | 1 | 500 | 1 | 500 | 0.0 | 1026 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0622600 | Msa1264770 | 0.921208 | 4.800840e-88 | -8.615850e-47 |
| Msa1222280 | Msa1264770 | 0.885243 | 9.615065e-72 | -8.615850e-47 |
| Msa0881160 | Msa1264770 | 0.921842 | 2.127796e-88 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1264770 | MtrunA17_Chr4g0073421 | 98.600 | 500 | 7 | 0 | 1 | 500 | 1 | 500 | 0.0 | 1026 |
| Msa1264770 | MtrunA17_Chr1g0149221 | 32.537 | 335 | 170 | 9 | 150 | 428 | 184 | 518 | 3.52e-45 | 167 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1264770 | AT4G30490.1 | 72.685 | 432 | 107 | 3 | 67 | 487 | 63 | 494 | 0.0 | 663 |
| Msa1264770 | AT4G28070.2 | 73.923 | 418 | 105 | 2 | 77 | 490 | 53 | 470 | 0.0 | 649 |
| Msa1264770 | AT4G28070.1 | 71.770 | 418 | 105 | 3 | 77 | 490 | 53 | 461 | 0.0 | 623 |
| Msa1264770 | AT2G25530.1 | 30.732 | 410 | 209 | 12 | 148 | 482 | 233 | 642 | 9.63e-46 | 169 |
| Msa1264770 | AT2G25530.2 | 31.229 | 301 | 151 | 9 | 148 | 392 | 233 | 533 | 1.27e-37 | 145 |
Find 121 sgRNAs with CRISPR-Local
Find 262 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTTTCATTTCCTCATTTC+TGG | 0.034647 | 8_2:+68316337 | Msa1264770:five_prime_UTR |
| GTAAAAGGTTTATATCTTTA+TGG | 0.140769 | 8_2:+68317654 | Msa1264770:CDS |
| CTTGGAGCTGCAGATTATTT+TGG | 0.152535 | 8_2:+68319248 | Msa1264770:CDS |
| CACTCCATTGTACATTATTT+TGG | 0.164150 | 8_2:-68320701 | None:intergenic |
| CATTACTACTTCCACTTCTT+GGG | 0.228752 | 8_2:-68319035 | None:intergenic |
| CCTTCGCATTCACCTGTAAA+AGG | 0.235163 | 8_2:+68317639 | Msa1264770:CDS |
| CCATTACTACTTCCACTTCT+TGG | 0.244604 | 8_2:-68319036 | None:intergenic |
| CTAGTTAGTATCATAGTTAT+TGG | 0.246189 | 8_2:+68320671 | Msa1264770:three_prime_UTR |
| GTGTCATGTCATGTTGGTTT+TGG | 0.251233 | 8_2:-68316162 | None:intergenic |
| CCTTTCATTTCCTCATTTCT+GGG | 0.272586 | 8_2:+68316338 | Msa1264770:five_prime_UTR |
| CCACCCTCATATAGATTATC+TGG | 0.285514 | 8_2:-68318635 | None:intergenic |
| AAGCTCTTCAAAAGGAAAAT+AGG | 0.293582 | 8_2:-68319213 | None:intergenic |
| GCATACATAGGGAGTGAAAA+TGG | 0.307071 | 8_2:+68320501 | Msa1264770:three_prime_UTR |
| TTTCATACTTTAGCACTTGA+TGG | 0.308394 | 8_2:+68319521 | Msa1264770:CDS |
| ATTATGCCTTGATGAATTCA+TGG | 0.316826 | 8_2:+68318322 | Msa1264770:CDS |
| AAATATCCTATATACCTTAC+AGG | 0.319411 | 8_2:-68317474 | None:intergenic |
| TCTCGATCTCGAAGAGGTCC+TGG | 0.326019 | 8_2:-68320046 | None:intergenic |
| TCATCCCCAGGCCCTCAAAT+TGG | 0.346659 | 8_2:+68317921 | Msa1264770:intron |
| TCTTATCTTATCATCATTCC+AGG | 0.347369 | 8_2:+68316381 | Msa1264770:five_prime_UTR |
| CAAAACAGCAATATTGATAT+TGG | 0.349390 | 8_2:-68316253 | None:intergenic |
| TGTAACACAAACAACAATAT+TGG | 0.349539 | 8_2:+68320545 | Msa1264770:three_prime_UTR |
| GGGTGGCCAAGGATTCTATT+TGG | 0.353872 | 8_2:+68318943 | Msa1264770:intron |
| ATCAGCATCTTCCCTCTATC+TGG | 0.354219 | 8_2:+68316053 | Msa1264770:five_prime_UTR |
| TATGTAAACTTACTTGTAAT+AGG | 0.356860 | 8_2:-68317991 | None:intergenic |
| AATCCTATCTTCAAGCTTCA+AGG | 0.384402 | 8_2:-68320437 | None:intergenic |
| TTTACAGACACGGGTGGCTT+TGG | 0.384999 | 8_2:+68317598 | Msa1264770:intron |
| TTGGTTGGCAGTGATTCATC+TGG | 0.385310 | 8_2:+68318962 | Msa1264770:CDS |
| GATCAACAGCAGAGAGTACT+TGG | 0.388002 | 8_2:+68320368 | Msa1264770:CDS |
| AAGAATTGCTAATGGTGAAT+TGG | 0.392844 | 8_2:+68317161 | Msa1264770:CDS |
| CTTGTGGATGTGGTAATAAA+TGG | 0.393880 | 8_2:-68316951 | None:intergenic |
| CATCTGCAGACCGTTAGATT+TGG | 0.396173 | 8_2:+68320617 | Msa1264770:three_prime_UTR |
| TGCACATAGGTTTGTCACTT+TGG | 0.400483 | 8_2:+68319577 | Msa1264770:CDS |
| CAGGTCCCGTTGGGAGCTAA+TGG | 0.404694 | 8_2:+68319185 | Msa1264770:intron |
| ACCCTTCATTGCAACATTGA+AGG | 0.413167 | 8_2:+68318679 | Msa1264770:CDS |
| TCTTGCCAAGTGCTTATTGT+TGG | 0.414479 | 8_2:+68320753 | Msa1264770:three_prime_UTR |
| TGTCCTTGAAGCTTGAAGAT+AGG | 0.415577 | 8_2:+68320434 | Msa1264770:exon |
| GATCCACTGGATGTTGTTGC+AGG | 0.421672 | 8_2:+68318275 | Msa1264770:CDS |
| CTTTGTGTTGACAATGAACT+AGG | 0.429854 | 8_2:+68320087 | Msa1264770:CDS |
| AAAATAAAACATCCAGATAG+AGG | 0.431655 | 8_2:-68316065 | None:intergenic |
| ATCAGCTGAACACAATAATC+TGG | 0.439826 | 8_2:-68319962 | None:intergenic |
| CATACATAGGGAGTGAAAAT+GGG | 0.442649 | 8_2:+68320502 | Msa1264770:three_prime_UTR |
| TTTCTTCATCAGGTCCCGTT+GGG | 0.444742 | 8_2:+68319176 | Msa1264770:intron |
| TACCTTCAATGTTGCAATGA+AGG | 0.448596 | 8_2:-68318681 | None:intergenic |
| AATGATGATAAGATAAGAAC+AGG | 0.451540 | 8_2:-68316376 | None:intergenic |
| GGCCAAGGATTCTATTTGGT+TGG | 0.453292 | 8_2:+68318947 | Msa1264770:CDS |
| GAGCTTTGTGACAAACCTCT+TGG | 0.455322 | 8_2:+68319230 | Msa1264770:CDS |
| ATATATATCATACCTACTAA+TGG | 0.455546 | 8_2:-68320127 | None:intergenic |
| CAAAGGACCGCACCATTAGT+AGG | 0.457309 | 8_2:+68320115 | Msa1264770:CDS |
| TGCTCCAGATAATCTATATG+AGG | 0.460863 | 8_2:+68318631 | Msa1264770:CDS |
| TCTGATAAACACGTCTCAAT+TGG | 0.461827 | 8_2:-68316800 | None:intergenic |
| ATTGTTGTTGTAGCATACAT+AGG | 0.466535 | 8_2:+68320489 | Msa1264770:three_prime_UTR |
| CAAGAAGTGGAAGTAGTAAT+GGG | 0.466955 | 8_2:+68319037 | Msa1264770:CDS |
| CCAAGAAGTGGAAGTAGTAA+TGG | 0.474250 | 8_2:+68319036 | Msa1264770:CDS |
| TTTCAGAATTGCGATCCAAT+TGG | 0.474325 | 8_2:-68317449 | None:intergenic |
| TGCCAACCAAATAGAATCCT+TGG | 0.478466 | 8_2:-68318949 | None:intergenic |
| CAAGGGCCTGTCAGATCCAC+TGG | 0.483629 | 8_2:+68318262 | Msa1264770:CDS |
| GCTAATGGTGAATTGGTAGA+TGG | 0.483791 | 8_2:+68317168 | Msa1264770:CDS |
| CTCGATCTCGAAGAGGTCCT+GGG | 0.489313 | 8_2:-68320045 | None:intergenic |
| TTGTCACAAAGCTCTTCAAA+AGG | 0.489550 | 8_2:-68319221 | None:intergenic |
| GGGTGCCCTTTGTTTAGCCT+CGG | 0.490152 | 8_2:-68320025 | None:intergenic |
| CACATCCATTAGCTCCCAAC+GGG | 0.490986 | 8_2:-68319190 | None:intergenic |
| TTATATCTTTATGGAGGAGT+AGG | 0.496721 | 8_2:+68317663 | Msa1264770:CDS |
| AGATTATTGTGTTCAGCTGA+TGG | 0.497678 | 8_2:+68319964 | Msa1264770:CDS |
| TTTGGACTGTAGGGTGGCCA+AGG | 0.500631 | 8_2:+68318932 | Msa1264770:intron |
| GGTAGATGGTGATAGTTGTC+AGG | 0.502390 | 8_2:+68317182 | Msa1264770:CDS |
| AGATGCATAGCTCATGAGAT+TGG | 0.505032 | 8_2:+68318793 | Msa1264770:CDS |
| GCATGCCGATGAATGCCAAT+TGG | 0.513381 | 8_2:+68317434 | Msa1264770:CDS |
| ACTTCCACTTCTTGGGGAGT+AGG | 0.514314 | 8_2:-68319028 | None:intergenic |
| TATGAACGAAGAATTGCTAA+TGG | 0.515907 | 8_2:+68317153 | Msa1264770:CDS |
| TTTCAGCAGTTGATTGGAGA+AGG | 0.524309 | 8_2:+68319001 | Msa1264770:CDS |
| ATTACTACTTCCACTTCTTG+GGG | 0.531458 | 8_2:-68319034 | None:intergenic |
| GCGATCCAATTGGCATTCAT+CGG | 0.533556 | 8_2:-68317439 | None:intergenic |
| GATGCTGTGAAGATCACAAA+TGG | 0.541513 | 8_2:+68316987 | Msa1264770:CDS |
| TTGTTGTTGTAGCATACATA+GGG | 0.543752 | 8_2:+68320490 | Msa1264770:three_prime_UTR |
| ACATAGGTTTGTCACTTTGG+TGG | 0.544354 | 8_2:+68319580 | Msa1264770:CDS |
| AATATCCGAGGCTAAACAAA+GGG | 0.547286 | 8_2:+68320020 | Msa1264770:CDS |
| AATTTACCATGAATTCATCA+AGG | 0.550011 | 8_2:-68318328 | None:intergenic |
| ATCTGGAGCACGATTTGAAG+TGG | 0.553243 | 8_2:-68318618 | None:intergenic |
| ACCTTCAATGTTGCAATGAA+GGG | 0.553846 | 8_2:-68318680 | None:intergenic |
| AGAAGAGAATCCCAGAAATG+AGG | 0.554653 | 8_2:-68316348 | None:intergenic |
| CACTGGCAAAACTATGCTGA+TGG | 0.554874 | 8_2:+68317686 | Msa1264770:CDS |
| AAAGGTTTATATCTTTATGG+AGG | 0.555222 | 8_2:+68317657 | Msa1264770:CDS |
| TGTGCAAGTGCCAAATCTAA+CGG | 0.557812 | 8_2:-68320627 | None:intergenic |
| TTTCAAATAAAAGAAAAGAA+AGG | 0.562961 | 8_2:+68320592 | Msa1264770:three_prime_UTR |
| GTTACAGTAACTAACAGAAG+TGG | 0.569680 | 8_2:+68317117 | Msa1264770:intron |
| GGAGTGAAAATGGGGTCAAG+TGG | 0.570176 | 8_2:+68320511 | Msa1264770:three_prime_UTR |
| CAAATCTAACGGTCTGCAGA+TGG | 0.575054 | 8_2:-68320616 | None:intergenic |
| TGAGATAGATCTTGTGGATG+TGG | 0.578254 | 8_2:-68316961 | None:intergenic |
| TTCAGACATCTATTCAGCAA+AGG | 0.578860 | 8_2:+68318471 | Msa1264770:CDS |
| CTTTATGGAGGAGTAGGCAC+TGG | 0.579507 | 8_2:+68317669 | Msa1264770:CDS |
| TTTGTGTTGACAATGAACTA+GGG | 0.582172 | 8_2:+68320088 | Msa1264770:CDS |
| AGCAGAAAAGAAAGAAAGAG+AGG | 0.582199 | 8_2:+68320404 | Msa1264770:CDS |
| CTTCGTTCATACTCGACAAG+AGG | 0.582706 | 8_2:-68317141 | None:intergenic |
| CACACCTACTCCCCAAGAAG+TGG | 0.584261 | 8_2:+68319024 | Msa1264770:CDS |
| GATATTGTGTCATGTCATGT+TGG | 0.587354 | 8_2:-68316168 | None:intergenic |
| ATCAGCTGAGATAGATCTTG+TGG | 0.587879 | 8_2:-68316967 | None:intergenic |
| ATATGAGGGTGGACTGCAGA+GGG | 0.590233 | 8_2:+68318646 | Msa1264770:CDS |
| GTAATAAAGCAGCTGCACAT+AGG | 0.592138 | 8_2:+68319564 | Msa1264770:CDS |
| CCCAGAAATGAGGAAATGAA+AGG | 0.592333 | 8_2:-68316338 | None:intergenic |
| GCGATTAAGTATCAATGCAT+CGG | 0.592840 | 8_2:-68318445 | None:intergenic |
| AAATAAAACATCCAGATAGA+GGG | 0.600644 | 8_2:-68316064 | None:intergenic |
| TGTGTCCTTGTAGAAGCACA+AGG | 0.601086 | 8_2:+68318244 | Msa1264770:intron |
| TTTGAGTTGGACATTTGACT+CGG | 0.602275 | 8_2:-68316122 | None:intergenic |
| CAACATCCAGTGGATCTGAC+AGG | 0.604333 | 8_2:-68318268 | None:intergenic |
| TGACTACCGCAAAATGACTT+CGG | 0.612203 | 8_2:+68318825 | Msa1264770:CDS |
| AGAACCAAAATAATGTACAA+TGG | 0.615266 | 8_2:+68320697 | Msa1264770:three_prime_UTR |
| TCTCCTGCAACAACATCCAG+TGG | 0.615366 | 8_2:-68318278 | None:intergenic |
| ATTAACCAACAATAAGCACT+TGG | 0.628041 | 8_2:-68320758 | None:intergenic |
| GCTCCAGATAATCTATATGA+GGG | 0.631147 | 8_2:+68318632 | Msa1264770:CDS |
| AAATAATCTGCAGCTCCAAG+AGG | 0.636094 | 8_2:-68319245 | None:intergenic |
| CCAGATAATCTATATGAGGG+TGG | 0.640752 | 8_2:+68318635 | Msa1264770:CDS |
| GCACATCCATTAGCTCCCAA+CGG | 0.641018 | 8_2:-68319191 | None:intergenic |
| CAATGAACTAGGGTTTGCAA+AGG | 0.642707 | 8_2:+68320098 | Msa1264770:CDS |
| CAATATCCGAGGCTAAACAA+AGG | 0.645978 | 8_2:+68320019 | Msa1264770:CDS |
| TATATGAGGGTGGACTGCAG+AGG | 0.648674 | 8_2:+68318645 | Msa1264770:CDS |
| TATCATACCTACTAATGGTG+CGG | 0.651113 | 8_2:-68320122 | None:intergenic |
| ATACATAGGGAGTGAAAATG+GGG | 0.651485 | 8_2:+68320503 | Msa1264770:three_prime_UTR |
| AGGCTAAACAAAGGGCACCC+AGG | 0.661005 | 8_2:+68320028 | Msa1264770:CDS |
| GTGTCCTTGTAGAAGCACAA+GGG | 0.667573 | 8_2:+68318245 | Msa1264770:intron |
| TGGATGTGGTAATAAATGGA+CGG | 0.699883 | 8_2:-68316947 | None:intergenic |
| GCTGTGAAGATCACAAATGG+AGG | 0.734691 | 8_2:+68316990 | Msa1264770:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTTGAACATTAATTAATTT+TGG | + | chr8_2:68318136-68318155 | Msa1264770:intron | 15.0% |
| !!! | GCTTTAAATATTTTTATAGT+TGG | + | chr8_2:68318705-68318724 | Msa1264770:intron | 15.0% |
| !!! | TATTTGTTTTTATGCTAATT+TGG | + | chr8_2:68318914-68318933 | Msa1264770:intron | 15.0% |
| !! | ATTAATTTAATGTTCCAAAA+TGG | - | chr8_2:68319334-68319353 | None:intergenic | 15.0% |
| !!! | ATCTTTAAAATTAGAATTTC+AGG | - | chr8_2:68319784-68319803 | None:intergenic | 15.0% |
| !!! | AAAAATTGTACAATTAGTTT+TGG | + | chr8_2:68320157-68320176 | Msa1264770:intron | 15.0% |
| !!! | TTGGTTTTTATTCATAAAAT+AGG | + | chr8_2:68320258-68320277 | Msa1264770:intron | 15.0% |
| !!! | TGGTTTTTATTCATAAAATA+GGG | + | chr8_2:68320259-68320278 | Msa1264770:intron | 15.0% |
| !! | TTTCAAATAAAAGAAAAGAA+AGG | + | chr8_2:68320592-68320611 | Msa1264770:three_prime_UTR | 15.0% |
| !!! | TTATTTTTGTAATTGTAACG+TGG | + | chr8_2:68316081-68316100 | Msa1264770:five_prime_UTR | 20.0% |
| !!! | TGATGTTTTTTTTTTTGAGT+TGG | - | chr8_2:68316138-68316157 | None:intergenic | 20.0% |
| !!! | ATTTTTGCATGTATTGTAAT+TGG | - | chr8_2:68316286-68316305 | None:intergenic | 20.0% |
| !!! | TTTTCTTATCTGATTTGTAT+TGG | + | chr8_2:68317080-68317099 | Msa1264770:intron | 20.0% |
| !!! | CTTTTTTTTTTTTACAGACA+CGG | + | chr8_2:68317588-68317607 | Msa1264770:intron | 20.0% |
| !!! | TTTTTTTTTTTTACAGACAC+GGG | + | chr8_2:68317589-68317608 | Msa1264770:intron | 20.0% |
| !!! | TAAAGATATAAACCTTTTAC+AGG | - | chr8_2:68317654-68317673 | None:intergenic | 20.0% |
| !! | GTAAAAGGTTTATATCTTTA+TGG | + | chr8_2:68317654-68317673 | Msa1264770:CDS | 20.0% |
| !! | ACAAAATTAAGAAATCAAGA+CGG | - | chr8_2:68317753-68317772 | None:intergenic | 20.0% |
| !! | TATGTAAACTTACTTGTAAT+AGG | - | chr8_2:68317994-68318013 | None:intergenic | 20.0% |
| !! | AAAAAAAGGATACATCTAAA+AGG | - | chr8_2:68318029-68318048 | None:intergenic | 20.0% |
| !! | CCAAAAGAATACATAATTAT+TGG | - | chr8_2:68318081-68318100 | None:intergenic | 20.0% |
| !!! | CCAATAATTATGTATTCTTT+TGG | + | chr8_2:68318078-68318097 | Msa1264770:intron | 20.0% |
| !!! | AATATTTTTATAGTTGGAAG+TGG | + | chr8_2:68318711-68318730 | Msa1264770:intron | 20.0% |
| !! | TTCTTTCATTGTGATAATTT+CGG | + | chr8_2:68319391-68319410 | Msa1264770:intron | 20.0% |
| !!! | TATTAAAATATGAAGTGCTT+GGG | - | chr8_2:68319677-68319696 | None:intergenic | 20.0% |
| !! | ATATATATCATACCTACTAA+TGG | - | chr8_2:68320130-68320149 | None:intergenic | 20.0% |
| !! | ATGAATAAAAACCAAACAAT+GGG | - | chr8_2:68320253-68320272 | None:intergenic | 20.0% |
| !! | TATGAATAAAAACCAAACAA+TGG | - | chr8_2:68320254-68320273 | None:intergenic | 20.0% |
| ! | AAATAAAACATCCAGATAGA+GGG | - | chr8_2:68316067-68316086 | None:intergenic | 25.0% |
| ! | AAAATAAAACATCCAGATAG+AGG | - | chr8_2:68316068-68316087 | None:intergenic | 25.0% |
| ! | CAAAACAGCAATATTGATAT+TGG | - | chr8_2:68316256-68316275 | None:intergenic | 25.0% |
| !!! | AATGAAAGGTTGAGTTTTTT+GGG | - | chr8_2:68316327-68316346 | None:intergenic | 25.0% |
| !!! | AAATGAAAGGTTGAGTTTTT+TGG | - | chr8_2:68316328-68316347 | None:intergenic | 25.0% |
| ! | AATGATGATAAGATAAGAAC+AGG | - | chr8_2:68316379-68316398 | None:intergenic | 25.0% |
| ! | CTAACATATTGGAATGAATT+GGG | + | chr8_2:68316510-68316529 | Msa1264770:intron | 25.0% |
| ! | AATGAATTGGGATTTGAAAA+TGG | + | chr8_2:68316522-68316541 | Msa1264770:intron | 25.0% |
| !!! | ACGTGTTTTTTTTTTATTGC+AGG | + | chr8_2:68316691-68316710 | Msa1264770:intron | 25.0% |
| !!! | CGTGTTTTTTTTTTATTGCA+GGG | + | chr8_2:68316692-68316711 | Msa1264770:intron | 25.0% |
| !! | GGATTCTTGAAAAATTTTGT+GGG | + | chr8_2:68316713-68316732 | Msa1264770:five_prime_UTR | 25.0% |
| !! | TGAAATTATTTTCCCTACTT+TGG | + | chr8_2:68317241-68317260 | Msa1264770:intron | 25.0% |
| ! | AAATATCCTATATACCTTAC+AGG | - | chr8_2:68317477-68317496 | None:intergenic | 25.0% |
| ! | TGTTCAAATCTTGAACTTTA+TGG | + | chr8_2:68317520-68317539 | Msa1264770:intron | 25.0% |
| ! | CGTGTCTGTAAAAAAAAAAA+AGG | - | chr8_2:68317590-68317609 | None:intergenic | 25.0% |
| ! | AAAGGTTTATATCTTTATGG+AGG | + | chr8_2:68317657-68317676 | Msa1264770:CDS | 25.0% |
| ! | TTTATGATCAATTGTGAGTT+TGG | + | chr8_2:68317715-68317734 | Msa1264770:intron | 25.0% |
| !! | TTTTGTATTACATGCTATTG+AGG | + | chr8_2:68317767-68317786 | Msa1264770:intron | 25.0% |
| ! | AATTTACCATGAATTCATCA+AGG | - | chr8_2:68318331-68318350 | None:intergenic | 25.0% |
| ! | CATAAAATCATGTTGTATAG+AGG | - | chr8_2:68318527-68318546 | None:intergenic | 25.0% |
| !! | CTCTATACAACATGATTTTA+TGG | + | chr8_2:68318525-68318544 | Msa1264770:intron | 25.0% |
| ! | AGATAATGATTTCATTGTTG+TGG | + | chr8_2:68319358-68319377 | Msa1264770:intron | 25.0% |
| ! | GGAAATCTGTAAAATTATGA+AGG | - | chr8_2:68319440-68319459 | None:intergenic | 25.0% |
| ! | TTTATGGATCTCTCATATAA+TGG | - | chr8_2:68319461-68319480 | None:intergenic | 25.0% |
| !!! | CATTGTGTAACATTGATTTA+TGG | - | chr8_2:68319477-68319496 | None:intergenic | 25.0% |
| ! | TTATTACTAAGCCCAAAAAT+CGG | - | chr8_2:68319551-68319570 | None:intergenic | 25.0% |
| ! | AGAAGACAAAGTTTAAATGT+GGG | - | chr8_2:68319630-68319649 | None:intergenic | 25.0% |
| !! | CTATTAAAATATGAAGTGCT+TGG | - | chr8_2:68319678-68319697 | None:intergenic | 25.0% |
| !!! | TTTTTTGAAAGAGATCAAGA+GGG | - | chr8_2:68319993-68320012 | None:intergenic | 25.0% |
| !!! | ATTTTTTGAAAGAGATCAAG+AGG | - | chr8_2:68319994-68320013 | None:intergenic | 25.0% |
| ! | AAAAATAGTAACAATATCCG+AGG | + | chr8_2:68320008-68320027 | Msa1264770:CDS | 25.0% |
| ! | TGAATAAAAACCAAACAATG+GGG | - | chr8_2:68320252-68320271 | None:intergenic | 25.0% |
| ! | TGATCAGTAATCATTAATCA+TGG | - | chr8_2:68320320-68320339 | None:intergenic | 25.0% |
| ! | TGTAACACAAACAACAATAT+TGG | + | chr8_2:68320545-68320564 | Msa1264770:three_prime_UTR | 25.0% |
| ! | CTAGTTAGTATCATAGTTAT+TGG | + | chr8_2:68320671-68320690 | Msa1264770:three_prime_UTR | 25.0% |
| ! | AGAACCAAAATAATGTACAA+TGG | + | chr8_2:68320697-68320716 | Msa1264770:three_prime_UTR | 25.0% |
| TCTTATCTTATCATCATTCC+AGG | + | chr8_2:68316381-68316400 | Msa1264770:five_prime_UTR | 30.0% | |
| TAGGAAGATTGCTGAAAAAA+GGG | - | chr8_2:68316493-68316512 | None:intergenic | 30.0% | |
| TTAGGAAGATTGCTGAAAAA+AGG | - | chr8_2:68316494-68316513 | None:intergenic | 30.0% | |
| CCAATTCATTCCAATATGTT+AGG | - | chr8_2:68316512-68316531 | None:intergenic | 30.0% | |
| CCTAACATATTGGAATGAAT+TGG | + | chr8_2:68316509-68316528 | Msa1264770:intron | 30.0% | |
| ! | GGGATTCTTGAAAAATTTTG+TGG | + | chr8_2:68316712-68316731 | Msa1264770:intron | 30.0% |
| ! | CAACACTTTTCAAAGTAACA+AGG | - | chr8_2:68316867-68316886 | None:intergenic | 30.0% |
| TATGAACGAAGAATTGCTAA+TGG | + | chr8_2:68317153-68317172 | Msa1264770:CDS | 30.0% | |
| AAGAATTGCTAATGGTGAAT+TGG | + | chr8_2:68317161-68317180 | Msa1264770:CDS | 30.0% | |
| !! | TTTTCCCTACTTTGGTTTAT+CGG | + | chr8_2:68317249-68317268 | Msa1264770:intron | 30.0% |
| ! | TTTCTTGCTTTCTTTTGTTG+AGG | + | chr8_2:68317361-68317380 | Msa1264770:intron | 30.0% |
| GAAAAACCTGTAAGGTATAT+AGG | + | chr8_2:68317468-68317487 | Msa1264770:intron | 30.0% | |
| TTATATCTTTATGGAGGAGT+AGG | + | chr8_2:68317663-68317682 | Msa1264770:CDS | 30.0% | |
| !!! | ATTTTCAAGTCTCAGTGTAA+GGG | + | chr8_2:68317803-68317822 | Msa1264770:intron | 30.0% |
| TTTAACCTCATAAGAACACA+TGG | - | chr8_2:68317861-68317880 | None:intergenic | 30.0% | |
| ! | CTCTTTTTCTTCCAATTTGA+GGG | - | chr8_2:68317935-68317954 | None:intergenic | 30.0% |
| CAAGTAGGGAATAGAAAAAA+AGG | - | chr8_2:68318043-68318062 | None:intergenic | 30.0% | |
| TAATTGACAAACAGAGTATG+AGG | + | chr8_2:68318196-68318215 | Msa1264770:intron | 30.0% | |
| ATTATGCCTTGATGAATTCA+TGG | + | chr8_2:68318322-68318341 | Msa1264770:CDS | 30.0% | |
| CTTCATTTCTTCAATGTGTT+TGG | + | chr8_2:68318573-68318592 | Msa1264770:intron | 30.0% | |
| TACATCAGTATACACATACT+AGG | - | chr8_2:68318769-68318788 | None:intergenic | 30.0% | |
| TAGTATGTGTATACTGATGT+AGG | + | chr8_2:68318768-68318787 | Msa1264770:intron | 30.0% | |
| TTTATGCTAATTTGGACTGT+AGG | + | chr8_2:68318922-68318941 | Msa1264770:intron | 30.0% | |
| TTATGCTAATTTGGACTGTA+GGG | + | chr8_2:68318923-68318942 | Msa1264770:intron | 30.0% | |
| AAAAAGTTTCAGCAGTTGAT+TGG | + | chr8_2:68318995-68319014 | Msa1264770:CDS | 30.0% | |
| AAGCTCTTCAAAAGGAAAAT+AGG | - | chr8_2:68319216-68319235 | None:intergenic | 30.0% | |
| TTTCATACTTTAGCACTTGA+TGG | + | chr8_2:68319521-68319540 | Msa1264770:CDS | 30.0% | |
| TATTACTAAGCCCAAAAATC+GGG | - | chr8_2:68319550-68319569 | None:intergenic | 30.0% | |
| ! | TGGATGTAAGTCCTTTTAAA+TGG | + | chr8_2:68319600-68319619 | Msa1264770:intron | 30.0% |
| GAGAAGACAAAGTTTAAATG+TGG | - | chr8_2:68319631-68319650 | None:intergenic | 30.0% | |
| ACATAATCTCATTCATAGCT+AGG | - | chr8_2:68319721-68319740 | None:intergenic | 30.0% | |
| AAGCTTATTCCACTTCAATA+AGG | + | chr8_2:68319818-68319837 | Msa1264770:intron | 30.0% | |
| GCAGGAAATAGAAATATAGA+GGG | - | chr8_2:68319880-68319899 | None:intergenic | 30.0% | |
| ! | CTCTATATTTCTATTTCCTG+CGG | + | chr8_2:68319879-68319898 | Msa1264770:intron | 30.0% |
| TGTTACAAACAAACAAAGCA+TGG | - | chr8_2:68319922-68319941 | None:intergenic | 30.0% | |
| !! | ATGCTTTGTTTGTTTGTAAC+AGG | + | chr8_2:68319921-68319940 | Msa1264770:intron | 30.0% |
| ! | TTTGTGTTGACAATGAACTA+GGG | + | chr8_2:68320088-68320107 | Msa1264770:CDS | 30.0% |
| TCATAAAATAGGGCGAAAAA+TGG | + | chr8_2:68320269-68320288 | Msa1264770:intron | 30.0% | |
| ! | ATTGTTGTTGTAGCATACAT+AGG | + | chr8_2:68320489-68320508 | Msa1264770:three_prime_UTR | 30.0% |
| ! | TTGTTGTTGTAGCATACATA+GGG | + | chr8_2:68320490-68320509 | Msa1264770:three_prime_UTR | 30.0% |
| ! | CACTCCATTGTACATTATTT+TGG | - | chr8_2:68320704-68320723 | None:intergenic | 30.0% |
| ATTAACCAACAATAAGCACT+TGG | - | chr8_2:68320761-68320780 | None:intergenic | 30.0% | |
| !! | TTTGAGTTGGACATTTGACT+CGG | - | chr8_2:68316125-68316144 | None:intergenic | 35.0% |
| !!! | TGTCATGTCATGTTGGTTTT+GGG | - | chr8_2:68316164-68316183 | None:intergenic | 35.0% |
| GATATTGTGTCATGTCATGT+TGG | - | chr8_2:68316171-68316190 | None:intergenic | 35.0% | |
| !!! | GTTTTTTGGGAGTGAAAAGA+GGG | - | chr8_2:68316314-68316333 | None:intergenic | 35.0% |
| !!! | AGTTTTTTGGGAGTGAAAAG+AGG | - | chr8_2:68316315-68316334 | None:intergenic | 35.0% |
| ACCTTTCATTTCCTCATTTC+TGG | + | chr8_2:68316337-68316356 | Msa1264770:five_prime_UTR | 35.0% | |
| CCTTTCATTTCCTCATTTCT+GGG | + | chr8_2:68316338-68316357 | Msa1264770:five_prime_UTR | 35.0% | |
| TAATGATGACAAAACGAACC+TGG | - | chr8_2:68316402-68316421 | None:intergenic | 35.0% | |
| CAGCAATCTTCCTAACATAT+TGG | + | chr8_2:68316499-68316518 | Msa1264770:intron | 35.0% | |
| TCTGATAAACACGTCTCAAT+TGG | - | chr8_2:68316803-68316822 | None:intergenic | 35.0% | |
| TGGATGTGGTAATAAATGGA+CGG | - | chr8_2:68316950-68316969 | None:intergenic | 35.0% | |
| CTTGTGGATGTGGTAATAAA+TGG | - | chr8_2:68316954-68316973 | None:intergenic | 35.0% | |
| GTTACAGTAACTAACAGAAG+TGG | + | chr8_2:68317117-68317136 | Msa1264770:intron | 35.0% | |
| ! | TTTCCCTACTTTGGTTTATC+GGG | + | chr8_2:68317250-68317269 | Msa1264770:intron | 35.0% |
| TTTCCCGATAAACCAAAGTA+GGG | - | chr8_2:68317256-68317275 | None:intergenic | 35.0% | |
| ! | TTTTCCCGATAAACCAAAGT+AGG | - | chr8_2:68317257-68317276 | None:intergenic | 35.0% |
| ATCATGCATGCATTTGTTCA+TGG | + | chr8_2:68317296-68317315 | Msa1264770:intron | 35.0% | |
| ! | TTGCTTTCTTTTGTTGAGGT+AGG | + | chr8_2:68317365-68317384 | Msa1264770:intron | 35.0% |
| TTTCAGAATTGCGATCCAAT+TGG | - | chr8_2:68317452-68317471 | None:intergenic | 35.0% | |
| ! | GCAATTCTGAAAAACCTGTA+AGG | + | chr8_2:68317460-68317479 | Msa1264770:CDS | 35.0% |
| ATTTGAACAGACATATCAGC+AGG | - | chr8_2:68317509-68317528 | None:intergenic | 35.0% | |
| ! | TCTGTTTTCACATCATGTTG+AGG | + | chr8_2:68317545-68317564 | Msa1264770:intron | 35.0% |
| !!! | TTTTTTTTTACAGACACGGG+TGG | + | chr8_2:68317592-68317611 | Msa1264770:intron | 35.0% |
| ! | TGCTATTGAGGCAAATTTTG+AGG | + | chr8_2:68317779-68317798 | Msa1264770:intron | 35.0% |
| !!! | CATTTTCAAGTCTCAGTGTA+AGG | + | chr8_2:68317802-68317821 | Msa1264770:intron | 35.0% |
| !!! | TTTTCAAGTCTCAGTGTAAG+GGG | + | chr8_2:68317804-68317823 | Msa1264770:intron | 35.0% |
| ! | AGTGTAAGGGGAATATTTTG+AGG | + | chr8_2:68317816-68317835 | Msa1264770:intron | 35.0% |
| TTATGCCATGTGTTCTTATG+AGG | + | chr8_2:68317853-68317872 | Msa1264770:intron | 35.0% | |
| AATCAAGCATACAATAGAGC+TGG | - | chr8_2:68317897-68317916 | None:intergenic | 35.0% | |
| ! | CCTCTTTTTCTTCCAATTTG+AGG | - | chr8_2:68317936-68317955 | None:intergenic | 35.0% |
| CCTCAAATTGGAAGAAAAAG+AGG | + | chr8_2:68317933-68317952 | Msa1264770:CDS | 35.0% | |
| TTCTATTCCCTACTTGACAT+AGG | + | chr8_2:68318047-68318066 | Msa1264770:intron | 35.0% | |
| TCTATTCCCTACTTGACATA+GGG | + | chr8_2:68318048-68318067 | Msa1264770:intron | 35.0% | |
| ATTCTTCCCTATGTCAAGTA+GGG | - | chr8_2:68318057-68318076 | None:intergenic | 35.0% | |
| AATTCTTCCCTATGTCAAGT+AGG | - | chr8_2:68318058-68318077 | None:intergenic | 35.0% | |
| GCGATTAAGTATCAATGCAT+CGG | - | chr8_2:68318448-68318467 | None:intergenic | 35.0% | |
| TTCAGACATCTATTCAGCAA+AGG | + | chr8_2:68318471-68318490 | Msa1264770:CDS | 35.0% | |
| TGCTCCAGATAATCTATATG+AGG | + | chr8_2:68318631-68318650 | Msa1264770:CDS | 35.0% | |
| GCTCCAGATAATCTATATGA+GGG | + | chr8_2:68318632-68318651 | Msa1264770:CDS | 35.0% | |
| ACCTTCAATGTTGCAATGAA+GGG | - | chr8_2:68318683-68318702 | None:intergenic | 35.0% | |
| TACCTTCAATGTTGCAATGA+AGG | - | chr8_2:68318684-68318703 | None:intergenic | 35.0% | |
| ATTACTACTTCCACTTCTTG+GGG | - | chr8_2:68319037-68319056 | None:intergenic | 35.0% | |
| CATTACTACTTCCACTTCTT+GGG | - | chr8_2:68319038-68319057 | None:intergenic | 35.0% | |
| CAAGAAGTGGAAGTAGTAAT+GGG | + | chr8_2:68319037-68319056 | Msa1264770:CDS | 35.0% | |
| ! | TATTGCTCGTTTTCTTCATC+AGG | + | chr8_2:68319166-68319185 | Msa1264770:intron | 35.0% |
| TTGTCACAAAGCTCTTCAAA+AGG | - | chr8_2:68319224-68319243 | None:intergenic | 35.0% | |
| ATGTGGGCAAACCATTTAAA+AGG | - | chr8_2:68319614-68319633 | None:intergenic | 35.0% | |
| ! | CACTTCAATAAGGCATCATT+GGG | + | chr8_2:68319828-68319847 | Msa1264770:intron | 35.0% |
| AGAGGGTAACTAAAATGCAT+AGG | - | chr8_2:68319863-68319882 | None:intergenic | 35.0% | |
| CGCAGGAAATAGAAATATAG+AGG | - | chr8_2:68319881-68319900 | None:intergenic | 35.0% | |
| ! | ATTAATTTTACTCTCACCGC+AGG | - | chr8_2:68319898-68319917 | None:intergenic | 35.0% |
| ATCAGCTGAACACAATAATC+TGG | - | chr8_2:68319965-68319984 | None:intergenic | 35.0% | |
| AGATTATTGTGTTCAGCTGA+TGG | + | chr8_2:68319964-68319983 | Msa1264770:CDS | 35.0% | |
| AATATCCGAGGCTAAACAAA+GGG | + | chr8_2:68320020-68320039 | Msa1264770:CDS | 35.0% | |
| !!! | ATTTTTTCTCGATCTCGAAG+AGG | - | chr8_2:68320055-68320074 | None:intergenic | 35.0% |
| GAGATCGAGAAAAAATGATG+AGG | + | chr8_2:68320059-68320078 | Msa1264770:CDS | 35.0% | |
| ! | CTTTGTGTTGACAATGAACT+AGG | + | chr8_2:68320087-68320106 | Msa1264770:CDS | 35.0% |
| TATCATACCTACTAATGGTG+CGG | - | chr8_2:68320125-68320144 | None:intergenic | 35.0% | |
| ATGTAAATTGCCCCATTGTT+TGG | + | chr8_2:68320239-68320258 | Msa1264770:intron | 35.0% | |
| AGCAGAAAAGAAAGAAAGAG+AGG | + | chr8_2:68320404-68320423 | Msa1264770:CDS | 35.0% | |
| AATCCTATCTTCAAGCTTCA+AGG | - | chr8_2:68320440-68320459 | None:intergenic | 35.0% | |
| CATACATAGGGAGTGAAAAT+GGG | + | chr8_2:68320502-68320521 | Msa1264770:three_prime_UTR | 35.0% | |
| ATACATAGGGAGTGAAAATG+GGG | + | chr8_2:68320503-68320522 | Msa1264770:three_prime_UTR | 35.0% | |
| !!! | GTGTCATGTCATGTTGGTTT+TGG | - | chr8_2:68316165-68316184 | None:intergenic | 40.0% |
| CCCAGAAATGAGGAAATGAA+AGG | - | chr8_2:68316341-68316360 | None:intergenic | 40.0% | |
| AGAAGAGAATCCCAGAAATG+AGG | - | chr8_2:68316351-68316370 | None:intergenic | 40.0% | |
| TGAGATAGATCTTGTGGATG+TGG | - | chr8_2:68316964-68316983 | None:intergenic | 40.0% | |
| ATCAGCTGAGATAGATCTTG+TGG | - | chr8_2:68316970-68316989 | None:intergenic | 40.0% | |
| GATGCTGTGAAGATCACAAA+TGG | + | chr8_2:68316987-68317006 | Msa1264770:CDS | 40.0% | |
| GCTAATGGTGAATTGGTAGA+TGG | + | chr8_2:68317168-68317187 | Msa1264770:CDS | 40.0% | |
| GTTTATCGGGAAAATGTTGC+TGG | + | chr8_2:68317263-68317282 | Msa1264770:intron | 40.0% | |
| !!! | GCTTGATTTTTTTCATCCCC+AGG | + | chr8_2:68317909-68317928 | Msa1264770:intron | 40.0% |
| TGTCACAGCTTGAGATTTGT+TGG | + | chr8_2:68318399-68318418 | Msa1264770:intron | 40.0% | |
| !! | GAGATTTGTTGGTCTTCTGT+AGG | + | chr8_2:68318410-68318429 | Msa1264770:intron | 40.0% |
| CCACCCTCATATAGATTATC+TGG | - | chr8_2:68318638-68318657 | None:intergenic | 40.0% | |
| CCAGATAATCTATATGAGGG+TGG | + | chr8_2:68318635-68318654 | Msa1264770:CDS | 40.0% | |
| ACCCTTCATTGCAACATTGA+AGG | + | chr8_2:68318679-68318698 | Msa1264770:CDS | 40.0% | |
| AGATGCATAGCTCATGAGAT+TGG | + | chr8_2:68318793-68318812 | Msa1264770:CDS | 40.0% | |
| TGACTACCGCAAAATGACTT+CGG | + | chr8_2:68318825-68318844 | Msa1264770:CDS | 40.0% | |
| !! | GTCATACCGAAGTCATTTTG+CGG | - | chr8_2:68318834-68318853 | None:intergenic | 40.0% |
| TGCCAACCAAATAGAATCCT+TGG | - | chr8_2:68318952-68318971 | None:intergenic | 40.0% | |
| TTTCAGCAGTTGATTGGAGA+AGG | + | chr8_2:68319001-68319020 | Msa1264770:CDS | 40.0% | |
| CCATTACTACTTCCACTTCT+TGG | - | chr8_2:68319039-68319058 | None:intergenic | 40.0% | |
| CCAAGAAGTGGAAGTAGTAA+TGG | + | chr8_2:68319036-68319055 | Msa1264770:CDS | 40.0% | |
| AAATAATCTGCAGCTCCAAG+AGG | - | chr8_2:68319248-68319267 | None:intergenic | 40.0% | |
| ! | CTTGGAGCTGCAGATTATTT+TGG | + | chr8_2:68319248-68319267 | Msa1264770:CDS | 40.0% |
| TCTCATGCAAAATGCAAACG+AGG | + | chr8_2:68319304-68319323 | Msa1264770:intron | 40.0% | |
| CTCATGCAAAATGCAAACGA+GGG | + | chr8_2:68319305-68319324 | Msa1264770:intron | 40.0% | |
| !! | TTGATGGCATCCCGATTTTT+GGG | + | chr8_2:68319537-68319556 | Msa1264770:CDS | 40.0% |
| GTAATAAAGCAGCTGCACAT+AGG | + | chr8_2:68319564-68319583 | Msa1264770:CDS | 40.0% | |
| ! | TGCACATAGGTTTGTCACTT+TGG | + | chr8_2:68319577-68319596 | Msa1264770:CDS | 40.0% |
| !! | ACATAGGTTTGTCACTTTGG+TGG | + | chr8_2:68319580-68319599 | Msa1264770:CDS | 40.0% |
| ! | CCAATGATGCCTTATTGAAG+TGG | - | chr8_2:68319830-68319849 | None:intergenic | 40.0% |
| ! | CCACTTCAATAAGGCATCAT+TGG | + | chr8_2:68319827-68319846 | Msa1264770:intron | 40.0% |
| ! | TCAATAAGGCATCATTGGGA+CGG | + | chr8_2:68319832-68319851 | Msa1264770:intron | 40.0% |
| CAATATCCGAGGCTAAACAA+AGG | + | chr8_2:68320019-68320038 | Msa1264770:CDS | 40.0% | |
| CAATGAACTAGGGTTTGCAA+AGG | + | chr8_2:68320098-68320117 | Msa1264770:CDS | 40.0% | |
| AGATCATGAACAAACTCCAG+AGG | + | chr8_2:68320197-68320216 | Msa1264770:intron | 40.0% | |
| TGTCCTTGAAGCTTGAAGAT+AGG | + | chr8_2:68320434-68320453 | Msa1264770:exon | 40.0% | |
| GCATACATAGGGAGTGAAAA+TGG | + | chr8_2:68320501-68320520 | Msa1264770:three_prime_UTR | 40.0% | |
| TGTGCAAGTGCCAAATCTAA+CGG | - | chr8_2:68320630-68320649 | None:intergenic | 40.0% | |
| TTTGGCACTTGCACAAAAAG+CGG | + | chr8_2:68320635-68320654 | Msa1264770:three_prime_UTR | 40.0% | |
| TCTTGCCAAGTGCTTATTGT+TGG | + | chr8_2:68320753-68320772 | Msa1264770:three_prime_UTR | 40.0% | |
| ATCAGCATCTTCCCTCTATC+TGG | + | chr8_2:68316053-68316072 | Msa1264770:five_prime_UTR | 45.0% | |
| GCTGTGAAGATCACAAATGG+AGG | + | chr8_2:68316990-68317009 | Msa1264770:CDS | 45.0% | |
| CTTCGTTCATACTCGACAAG+AGG | - | chr8_2:68317144-68317163 | None:intergenic | 45.0% | |
| GGTAGATGGTGATAGTTGTC+AGG | + | chr8_2:68317182-68317201 | Msa1264770:CDS | 45.0% | |
| GCGATCCAATTGGCATTCAT+CGG | - | chr8_2:68317442-68317461 | None:intergenic | 45.0% | |
| TTCACATCATGTTGAGGCTC+TGG | + | chr8_2:68317551-68317570 | Msa1264770:intron | 45.0% | |
| ! | CCTTTTACAGGTGAATGCGA+AGG | - | chr8_2:68317642-68317661 | None:intergenic | 45.0% |
| CCTTCGCATTCACCTGTAAA+AGG | + | chr8_2:68317639-68317658 | Msa1264770:CDS | 45.0% | |
| CACTGGCAAAACTATGCTGA+TGG | + | chr8_2:68317686-68317705 | Msa1264770:CDS | 45.0% | |
| TTCTTCCAATTTGAGGGCCT+GGG | - | chr8_2:68317929-68317948 | None:intergenic | 45.0% | |
| TTTCTTCCAATTTGAGGGCC+TGG | - | chr8_2:68317930-68317949 | None:intergenic | 45.0% | |
| ! | TGTGTCCTTGTAGAAGCACA+AGG | + | chr8_2:68318244-68318263 | Msa1264770:intron | 45.0% |
| ! | GTGTCCTTGTAGAAGCACAA+GGG | + | chr8_2:68318245-68318264 | Msa1264770:intron | 45.0% |
| ! | ATCTGGAGCACGATTTGAAG+TGG | - | chr8_2:68318621-68318640 | None:intergenic | 45.0% |
| TGCTAATTTGGACTGTAGGG+TGG | + | chr8_2:68318926-68318945 | Msa1264770:intron | 45.0% | |
| GGCCAAGGATTCTATTTGGT+TGG | + | chr8_2:68318947-68318966 | Msa1264770:CDS | 45.0% | |
| TTGGTTGGCAGTGATTCATC+TGG | + | chr8_2:68318962-68318981 | Msa1264770:CDS | 45.0% | |
| ! | TTTTCTTCATCAGGTCCCGT+TGG | + | chr8_2:68319175-68319194 | Msa1264770:intron | 45.0% |
| TTTCTTCATCAGGTCCCGTT+GGG | + | chr8_2:68319176-68319195 | Msa1264770:intron | 45.0% | |
| ! | GAGCTTTGTGACAAACCTCT+TGG | + | chr8_2:68319230-68319249 | Msa1264770:CDS | 45.0% |
| ! | GCAAACGAGGGTTTCCATTT+TGG | + | chr8_2:68319317-68319336 | Msa1264770:intron | 45.0% |
| !! | CTTGATGGCATCCCGATTTT+TGG | + | chr8_2:68319536-68319555 | Msa1264770:CDS | 45.0% |
| TGAACAAACTCCAGAGGTTG+AGG | + | chr8_2:68320203-68320222 | Msa1264770:intron | 45.0% | |
| !! | GATCAACAGCAGAGAGTACT+TGG | + | chr8_2:68320368-68320387 | Msa1264770:CDS | 45.0% |
| CAAATCTAACGGTCTGCAGA+TGG | - | chr8_2:68320619-68320638 | None:intergenic | 45.0% | |
| CATCTGCAGACCGTTAGATT+TGG | + | chr8_2:68320617-68320636 | Msa1264770:three_prime_UTR | 45.0% | |
| !!! | TCTTTTTATTATTTAATTTT+CGG | + | chr8_2:68316625-68316644 | Msa1264770:intron | 5.0% |
| GCATGCCGATGAATGCCAAT+TGG | + | chr8_2:68317434-68317453 | Msa1264770:CDS | 50.0% | |
| TTTACAGACACGGGTGGCTT+TGG | + | chr8_2:68317598-68317617 | Msa1264770:intron | 50.0% | |
| CTTTATGGAGGAGTAGGCAC+TGG | + | chr8_2:68317669-68317688 | Msa1264770:CDS | 50.0% | |
| TCTTCCAATTTGAGGGCCTG+GGG | - | chr8_2:68317928-68317947 | None:intergenic | 50.0% | |
| CAACATCCAGTGGATCTGAC+AGG | - | chr8_2:68318271-68318290 | None:intergenic | 50.0% | |
| GATCCACTGGATGTTGTTGC+AGG | + | chr8_2:68318275-68318294 | Msa1264770:CDS | 50.0% | |
| TCTCCTGCAACAACATCCAG+TGG | - | chr8_2:68318281-68318300 | None:intergenic | 50.0% | |
| !! | TATATGAGGGTGGACTGCAG+AGG | + | chr8_2:68318645-68318664 | Msa1264770:CDS | 50.0% |
| !! | ATATGAGGGTGGACTGCAGA+GGG | + | chr8_2:68318646-68318665 | Msa1264770:CDS | 50.0% |
| GGGTGGCCAAGGATTCTATT+TGG | + | chr8_2:68318943-68318962 | Msa1264770:intron | 50.0% | |
| ACTTCCACTTCTTGGGGAGT+AGG | - | chr8_2:68319031-68319050 | None:intergenic | 50.0% | |
| CACATCCATTAGCTCCCAAC+GGG | - | chr8_2:68319193-68319212 | None:intergenic | 50.0% | |
| GCACATCCATTAGCTCCCAA+CGG | - | chr8_2:68319194-68319213 | None:intergenic | 50.0% | |
| CAAAGGACCGCACCATTAGT+AGG | + | chr8_2:68320115-68320134 | Msa1264770:CDS | 50.0% | |
| ACTTGTAGCACCTCAACCTC+TGG | - | chr8_2:68320216-68320235 | None:intergenic | 50.0% | |
| GGAGTGAAAATGGGGTCAAG+TGG | + | chr8_2:68320511-68320530 | Msa1264770:three_prime_UTR | 50.0% | |
| TCATCCCCAGGCCCTCAAAT+TGG | + | chr8_2:68317921-68317940 | Msa1264770:intron | 55.0% | |
| CAGGCCCTTGTGCTTCTACA+AGG | - | chr8_2:68318252-68318271 | None:intergenic | 55.0% | |
| TTTGGACTGTAGGGTGGCCA+AGG | + | chr8_2:68318932-68318951 | Msa1264770:intron | 55.0% | |
| CACACCTACTCCCCAAGAAG+TGG | + | chr8_2:68319024-68319043 | Msa1264770:CDS | 55.0% | |
| ! | GGGTGCCCTTTGTTTAGCCT+CGG | - | chr8_2:68320028-68320047 | None:intergenic | 55.0% |
| !! | AGGCTAAACAAAGGGCACCC+AGG | + | chr8_2:68320028-68320047 | Msa1264770:CDS | 55.0% |
| CTCGATCTCGAAGAGGTCCT+GGG | - | chr8_2:68320048-68320067 | None:intergenic | 55.0% | |
| TCTCGATCTCGAAGAGGTCC+TGG | - | chr8_2:68320049-68320068 | None:intergenic | 55.0% | |
| CAAGGGCCTGTCAGATCCAC+TGG | + | chr8_2:68318262-68318281 | Msa1264770:CDS | 60.0% | |
| CAGGTCCCGTTGGGAGCTAA+TGG | + | chr8_2:68319185-68319204 | Msa1264770:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 68316041 | 68320816 | 68316041 | ID=Msa1264770;Name=Msa1264770 |
| chr8_2 | mRNA | 68316041 | 68320816 | 68316041 | ID=Msa1264770-mRNA-1;Parent=Msa1264770;Name=Msa1264770-mRNA-1;_AED=0.07;_eAED=0.07;_QI=423|1|1|1|0.92|0.86|15|367|500 |
| chr8_2 | exon | 68316041 | 68316402 | 68316041 | ID=Msa1264770-mRNA-1:exon:22583;Parent=Msa1264770-mRNA-1 |
| chr8_2 | exon | 68316713 | 68317011 | 68316713 | ID=Msa1264770-mRNA-1:exon:22584;Parent=Msa1264770-mRNA-1 |
| chr8_2 | exon | 68317124 | 68317203 | 68317124 | ID=Msa1264770-mRNA-1:exon:22585;Parent=Msa1264770-mRNA-1 |
| chr8_2 | exon | 68317387 | 68317481 | 68317387 | ID=Msa1264770-mRNA-1:exon:22586;Parent=Msa1264770-mRNA-1 |
| chr8_2 | exon | 68317605 | 68317727 | 68317605 | ID=Msa1264770-mRNA-1:exon:22587;Parent=Msa1264770-mRNA-1 |
| chr8_2 | exon | 68317931 | 68318000 | 68317931 | ID=Msa1264770-mRNA-1:exon:22588;Parent=Msa1264770-mRNA-1 |
| chr8_2 | exon | 68318257 | 68318343 | 68318257 | ID=Msa1264770-mRNA-1:exon:22589;Parent=Msa1264770-mRNA-1 |
| chr8_2 | exon | 68318432 | 68318497 | 68318432 | ID=Msa1264770-mRNA-1:exon:22590;Parent=Msa1264770-mRNA-1 |
| chr8_2 | exon | 68318608 | 68318700 | 68318608 | ID=Msa1264770-mRNA-1:exon:22591;Parent=Msa1264770-mRNA-1 |
| chr8_2 | exon | 68318790 | 68318846 | 68318790 | ID=Msa1264770-mRNA-1:exon:22592;Parent=Msa1264770-mRNA-1 |
| chr8_2 | exon | 68318944 | 68319072 | 68318944 | ID=Msa1264770-mRNA-1:exon:22593;Parent=Msa1264770-mRNA-1 |
| chr8_2 | exon | 68319188 | 68319278 | 68319188 | ID=Msa1264770-mRNA-1:exon:22594;Parent=Msa1264770-mRNA-1 |
| chr8_2 | exon | 68319516 | 68319604 | 68319516 | ID=Msa1264770-mRNA-1:exon:22595;Parent=Msa1264770-mRNA-1 |
| chr8_2 | exon | 68319943 | 68320136 | 68319943 | ID=Msa1264770-mRNA-1:exon:22596;Parent=Msa1264770-mRNA-1 |
| chr8_2 | exon | 68320359 | 68320816 | 68320359 | ID=Msa1264770-mRNA-1:exon:22597;Parent=Msa1264770-mRNA-1 |
| chr8_2 | five_prime_UTR | 68316041 | 68316402 | 68316041 | ID=Msa1264770-mRNA-1:five_prime_utr;Parent=Msa1264770-mRNA-1 |
| chr8_2 | five_prime_UTR | 68316713 | 68316773 | 68316713 | ID=Msa1264770-mRNA-1:five_prime_utr;Parent=Msa1264770-mRNA-1 |
| chr8_2 | CDS | 68316774 | 68317011 | 68316774 | ID=Msa1264770-mRNA-1:cds;Parent=Msa1264770-mRNA-1 |
| chr8_2 | CDS | 68317124 | 68317203 | 68317124 | ID=Msa1264770-mRNA-1:cds;Parent=Msa1264770-mRNA-1 |
| chr8_2 | CDS | 68317387 | 68317481 | 68317387 | ID=Msa1264770-mRNA-1:cds;Parent=Msa1264770-mRNA-1 |
| chr8_2 | CDS | 68317605 | 68317727 | 68317605 | ID=Msa1264770-mRNA-1:cds;Parent=Msa1264770-mRNA-1 |
| chr8_2 | CDS | 68317931 | 68318000 | 68317931 | ID=Msa1264770-mRNA-1:cds;Parent=Msa1264770-mRNA-1 |
| chr8_2 | CDS | 68318257 | 68318343 | 68318257 | ID=Msa1264770-mRNA-1:cds;Parent=Msa1264770-mRNA-1 |
| chr8_2 | CDS | 68318432 | 68318497 | 68318432 | ID=Msa1264770-mRNA-1:cds;Parent=Msa1264770-mRNA-1 |
| chr8_2 | CDS | 68318608 | 68318700 | 68318608 | ID=Msa1264770-mRNA-1:cds;Parent=Msa1264770-mRNA-1 |
| chr8_2 | CDS | 68318790 | 68318846 | 68318790 | ID=Msa1264770-mRNA-1:cds;Parent=Msa1264770-mRNA-1 |
| chr8_2 | CDS | 68318944 | 68319072 | 68318944 | ID=Msa1264770-mRNA-1:cds;Parent=Msa1264770-mRNA-1 |
| chr8_2 | CDS | 68319188 | 68319278 | 68319188 | ID=Msa1264770-mRNA-1:cds;Parent=Msa1264770-mRNA-1 |
| chr8_2 | CDS | 68319516 | 68319604 | 68319516 | ID=Msa1264770-mRNA-1:cds;Parent=Msa1264770-mRNA-1 |
| chr8_2 | CDS | 68319943 | 68320136 | 68319943 | ID=Msa1264770-mRNA-1:cds;Parent=Msa1264770-mRNA-1 |
| chr8_2 | CDS | 68320359 | 68320449 | 68320359 | ID=Msa1264770-mRNA-1:cds;Parent=Msa1264770-mRNA-1 |
| chr8_2 | three_prime_UTR | 68320450 | 68320816 | 68320450 | ID=Msa1264770-mRNA-1:three_prime_utr;Parent=Msa1264770-mRNA-1 |
| Gene Sequence |
| Protein sequence |
