Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1265510 | XP_003610094.1 | 97.872 | 188 | 2 | 1 | 1 | 188 | 1 | 186 | 1.24e-120 | 348 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1265510 | sp|Q6GLZ8|SNR27_XENLA | 45.263 | 95 | 39 | 4 | 89 | 182 | 72 | 154 | 2.71e-13 | 67.4 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1265510 | Msa1361510 | 0.972831 | 2.062245e-135 | -8.615850e-47 |
| Msa1037030 | Msa1265510 | 0.811438 | 7.001323e-51 | -8.615850e-47 |
| Msa1221180 | Msa1265510 | 0.856516 | 3.051106e-62 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1265510 | MtrunA17_Chr4g0072231 | 97.872 | 188 | 2 | 1 | 1 | 188 | 1 | 186 | 1.14e-124 | 348 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1265510 | AT5G57370.1 | 54.857 | 175 | 50 | 7 | 39 | 188 | 49 | 219 | 1.14e-41 | 140 |
Find 77 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGAGTTCATGACTTAATT+TGG | 0.231974 | 8_2:+69891707 | None:intergenic |
| CACCAACTGTTTCTGCCTTC+AGG | 0.232895 | 8_2:+69887620 | None:intergenic |
| TTTGGTGGCGGTTCAATCTT+TGG | 0.236360 | 8_2:-69887647 | Msa1265510:three_prime_UTR |
| ATGTTTAACTAATACTCTTT+AGG | 0.250935 | 8_2:-69887357 | Msa1265510:three_prime_UTR |
| TGCATATAGGTAATATCTTT+TGG | 0.274225 | 8_2:-69887665 | Msa1265510:intron |
| TGTAGGTTATGTTAGTTAGT+AGG | 0.294728 | 8_2:-69887463 | Msa1265510:three_prime_UTR |
| GTAAAACATGACAATTAAAA+AGG | 0.301208 | 8_2:+69887332 | None:intergenic |
| GGTCGCTCATGGTGGAAGAT+AGG | 0.327312 | 8_2:+69891682 | None:intergenic |
| TCGGAACGACAAACATTTGT+AGG | 0.329970 | 8_2:-69887480 | Msa1265510:three_prime_UTR |
| TTCGTCTCTTTGTGTTCTTT+CGG | 0.343797 | 8_2:+69891396 | None:intergenic |
| GGAGCAAAGATGTTTATTAC+AGG | 0.348183 | 8_2:-69891738 | Msa1265510:five_prime_UTR |
| GTAGGTTATGTTAGTTAGTA+GGG | 0.387111 | 8_2:-69887462 | Msa1265510:three_prime_UTR |
| TGACGCTTTCTCGGAGGGTC+TGG | 0.391144 | 8_2:+69891444 | None:intergenic |
| CTCTGTCGCGGTGGCGCTCA+CGG | 0.393021 | 8_2:+69891661 | None:intergenic |
| TCACGCCGGTGACGCTTTCT+CGG | 0.409946 | 8_2:+69891435 | None:intergenic |
| TTGGTGGCGGTTCAATCTTT+GGG | 0.419989 | 8_2:-69887646 | Msa1265510:three_prime_UTR |
| CTGGAGAAGGTGTACGGTGG+TGG | 0.431728 | 8_2:+69891463 | None:intergenic |
| AGAGCGGTCGACGGGAGAAC+GGG | 0.445654 | 8_2:+69891497 | None:intergenic |
| TTCTTTCGGCTCGTCATCGA+CGG | 0.449334 | 8_2:+69891410 | None:intergenic |
| CAGCAAAAGCAGAAAGAGAA+TGG | 0.458617 | 8_2:-69891327 | Msa1265510:CDS |
| GTCAGCTCGATTGAAGAGTT+AGG | 0.464960 | 8_2:+69887429 | None:intergenic |
| TTCAATCGAGCTGACTGCTT+GGG | 0.465058 | 8_2:-69887421 | Msa1265510:three_prime_UTR |
| CTTCAATCGAGCTGACTGCT+TGG | 0.469096 | 8_2:-69887422 | Msa1265510:three_prime_UTR |
| CACGGTCAGGTGAACGTGTA+CGG | 0.473082 | 8_2:+69891541 | None:intergenic |
| CCCTAGCGATTCTTCTCAGC+AGG | 0.485061 | 8_2:+69891123 | None:intergenic |
| GTGGCGCTCACGGTCGCTCA+TGG | 0.487006 | 8_2:+69891671 | None:intergenic |
| CTCTGTCACGGTCACGGTCA+CGG | 0.489950 | 8_2:+69891580 | None:intergenic |
| TGACGAGAGCGTACACGGTC+AGG | 0.504053 | 8_2:+69891528 | None:intergenic |
| ACGGTCAGGTGAACGTGTAC+GGG | 0.508514 | 8_2:+69891542 | None:intergenic |
| GTGTACGGTGGTGGCGTCGA+CGG | 0.509241 | 8_2:+69891472 | None:intergenic |
| TTAGTGGAATCAAAACCAAC+AGG | 0.512200 | 8_2:+69891249 | None:intergenic |
| GTCGCTCATGGTGGAAGATA+GGG | 0.516293 | 8_2:+69891683 | None:intergenic |
| ACCCTCCGAGAAAGCGTCAC+CGG | 0.516482 | 8_2:-69891440 | Msa1265510:CDS |
| TCTTGCTGCGTGCTCTGTCA+CGG | 0.518504 | 8_2:+69891568 | None:intergenic |
| CGATTCTTCTCAGCAGGCAA+TGG | 0.522636 | 8_2:+69891129 | None:intergenic |
| ATGTTTGATATCAATTACAT+AGG | 0.523413 | 8_2:+69887390 | None:intergenic |
| GAGGGTCTGGAGAAGGTGTA+CGG | 0.524478 | 8_2:+69891457 | None:intergenic |
| TGCGTGCTCTGTCACGGTCA+CGG | 0.525050 | 8_2:+69891574 | None:intergenic |
| CACGATCGACGTCACGGTCG+CGG | 0.530206 | 8_2:+69891610 | None:intergenic |
| GAGAGCGGTCGACGGGAGAA+CGG | 0.536449 | 8_2:+69891496 | None:intergenic |
| GATCGAGATGATGAAGATGA+TGG | 0.542072 | 8_2:-69891277 | Msa1265510:CDS |
| TTTGAAAACAACATATAATG+TGG | 0.545775 | 8_2:+69887295 | None:intergenic |
| GTGGTGTCTGACTTCGTTGA+CGG | 0.549348 | 8_2:-69891369 | Msa1265510:CDS |
| AACACCGCTGACGTCAGCAC+CGG | 0.551004 | 8_2:+69891212 | None:intergenic |
| TTTCTCGGAGGGTCTGGAGA+AGG | 0.552400 | 8_2:+69891450 | None:intergenic |
| ATATCAATTACATAGGACAT+TGG | 0.557490 | 8_2:+69887397 | None:intergenic |
| TTCGCTCTCTTTCTCTGTCG+CGG | 0.559998 | 8_2:+69891649 | None:intergenic |
| GGCAGTATATGAATCGTCGT+GGG | 0.565157 | 8_2:-69891164 | Msa1265510:CDS |
| TCAATCTTTGGGAAGCCTGA+AGG | 0.565643 | 8_2:-69887635 | Msa1265510:three_prime_UTR |
| TACACTGGACATTGAGCTGA+AGG | 0.571442 | 8_2:+69887509 | None:intergenic |
| GTGTTAGAGCTGTTACGAAA+CGG | 0.577061 | 8_2:-69891194 | Msa1265510:CDS |
| CATTGAGCTGAAGGTAGCAA+AGG | 0.579411 | 8_2:+69887518 | None:intergenic |
| GCCTGCTGAGAAGAATCGCT+AGG | 0.579705 | 8_2:-69891124 | Msa1265510:intron |
| ACACAAAGAGACGAAGAAAG+TGG | 0.583689 | 8_2:-69891388 | Msa1265510:CDS |
| CGCCGGTGACGCTTTCTCGG+AGG | 0.583974 | 8_2:+69891438 | None:intergenic |
| ATTGAGCTGAAGGTAGCAAA+GGG | 0.589137 | 8_2:+69887519 | None:intergenic |
| TCGACGGTGAGAGCGGTCGA+CGG | 0.590232 | 8_2:+69891488 | None:intergenic |
| GAGAGTGACGAGAGCGTACA+CGG | 0.596965 | 8_2:+69891523 | None:intergenic |
| AAGATGATGGGAATTCCTGT+TGG | 0.599922 | 8_2:-69891264 | Msa1265510:CDS |
| GAGCAAAGATGTTTATTACA+GGG | 0.606977 | 8_2:-69891737 | Msa1265510:five_prime_UTR |
| CGACGATTCATATACTGCCT+CGG | 0.608944 | 8_2:+69891168 | None:intergenic |
| CCTGCTGAGAAGAATCGCTA+GGG | 0.615054 | 8_2:-69891123 | Msa1265510:intron |
| TGCGATCACGATCGACGTCA+CGG | 0.615119 | 8_2:+69891604 | None:intergenic |
| ATCGAGATGATGAAGATGAT+GGG | 0.616560 | 8_2:-69891276 | Msa1265510:CDS |
| GCGCTCACGGTCGCTCATGG+TGG | 0.631908 | 8_2:+69891674 | None:intergenic |
| GGTGGCGTCGACGGTGAGAG+CGG | 0.632925 | 8_2:+69891481 | None:intergenic |
| CTGAAGGCAGAAACAGTTGG+TGG | 0.634654 | 8_2:-69887619 | Msa1265510:three_prime_UTR |
| CTTCGTTGACGGAATCGCGA+AGG | 0.638838 | 8_2:-69891358 | Msa1265510:CDS |
| AGGCAGTATATGAATCGTCG+TGG | 0.641387 | 8_2:-69891165 | Msa1265510:CDS |
| TGGTGGAAACTAAAGAAGCA+AGG | 0.647494 | 8_2:-69887602 | Msa1265510:three_prime_UTR |
| AGCCTGAAGGCAGAAACAGT+TGG | 0.648842 | 8_2:-69887622 | Msa1265510:three_prime_UTR |
| GCTCTCTTTCTCTGTCGCGG+TGG | 0.660278 | 8_2:+69891652 | None:intergenic |
| GCAGTATATGAATCGTCGTG+GGG | 0.662492 | 8_2:-69891163 | Msa1265510:CDS |
| CAGTATATGAATCGTCGTGG+GGG | 0.663384 | 8_2:-69891162 | Msa1265510:CDS |
| GGTCTGGAGAAGGTGTACGG+TGG | 0.669757 | 8_2:+69891460 | None:intergenic |
| CGTCATCGACGGAATCACGC+CGG | 0.683749 | 8_2:+69891421 | None:intergenic |
| ACTAAGGGAAAACCAGTACC+CGG | 0.686892 | 8_2:-69891231 | Msa1265510:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAAAAAGAAAAAAGA+AGG | + | chr8_2:69891252-69891271 | None:intergenic | 10.0% |
| !! | TTAGGAATATCAAAATAATA+TGG | - | chr8_2:69889126-69889145 | Msa1265510:intron | 15.0% |
| !! | TCTTATCATTCTGATTTATT+TGG | - | chr8_2:69888291-69888310 | Msa1265510:intron | 20.0% |
| !! | AATTTGATTGTGTTACAATA+TGG | - | chr8_2:69889010-69889029 | Msa1265510:intron | 20.0% |
| !!! | TTACCTATTTATTTAGGATA+AGG | + | chr8_2:69889105-69889124 | None:intergenic | 20.0% |
| !! | CCTAATTTACCTATTTATTT+AGG | + | chr8_2:69889111-69889130 | None:intergenic | 20.0% |
| !! | CCTAAATAAATAGGTAAATT+AGG | - | chr8_2:69889108-69889127 | Msa1265510:intron | 20.0% |
| !!! | AATGGTATATTTGTTACAAA+TGG | + | chr8_2:69889214-69889233 | None:intergenic | 20.0% |
| !! | TTACAATTAAACAAAAGAAG+TGG | - | chr8_2:69889729-69889748 | Msa1265510:intron | 20.0% |
| !! | TACAATTAAACAAAAGAAGT+GGG | - | chr8_2:69889730-69889749 | Msa1265510:intron | 20.0% |
| !!! | ATGCATTTATTTTATTTCTG+AGG | - | chr8_2:69890829-69890848 | Msa1265510:intron | 20.0% |
| !!! | ATTGCATCTTTGAAAATTTA+GGG | + | chr8_2:69891066-69891085 | None:intergenic | 20.0% |
| !!! | ATTGTGCAGAAAATATTTTA+CGG | + | chr8_2:69891323-69891342 | None:intergenic | 20.0% |
| !! | ATGTTTGATATCAATTACAT+AGG | + | chr8_2:69891663-69891682 | None:intergenic | 20.0% |
| !! | ATGTTTAACTAATACTCTTT+AGG | - | chr8_2:69891693-69891712 | Msa1265510:five_prime_UTR | 20.0% |
| !! | GTAAAACATGACAATTAAAA+AGG | + | chr8_2:69891721-69891740 | None:intergenic | 20.0% |
| ! | TTAGAGTTCATGACTTAATT+TGG | + | chr8_2:69887346-69887365 | None:intergenic | 25.0% |
| ! | ACCCTAATTTATGATAGATT+AGG | - | chr8_2:69887989-69888008 | Msa1265510:intron | 25.0% |
| ! | CCCTAATCTATCATAAATTA+GGG | + | chr8_2:69887993-69888012 | None:intergenic | 25.0% |
| ! | CCCTAATTTATGATAGATTA+GGG | - | chr8_2:69887990-69888009 | Msa1265510:intron | 25.0% |
| ! | ACCCTAATCTATCATAAATT+AGG | + | chr8_2:69887994-69888013 | None:intergenic | 25.0% |
| !! | GATAACCTGTTAATTTGAAT+TGG | - | chr8_2:69888136-69888155 | Msa1265510:intron | 25.0% |
| !! | TTGTGATTAGTTCAATATTG+TGG | - | chr8_2:69888219-69888238 | Msa1265510:intron | 25.0% |
| ! | GTTTATTAAGACATATCTCT+GGG | + | chr8_2:69888341-69888360 | None:intergenic | 25.0% |
| ! | TGTTTATTAAGACATATCTC+TGG | + | chr8_2:69888342-69888361 | None:intergenic | 25.0% |
| !!! | AGGTTTTCTAAAAAACATCA+AGG | + | chr8_2:69888596-69888615 | None:intergenic | 25.0% |
| ! | TTCCTAACAAATACATTTAC+AGG | + | chr8_2:69888673-69888692 | None:intergenic | 25.0% |
| !! | TGTAAATGTATTTGTTAGGA+AGG | - | chr8_2:69888672-69888691 | Msa1265510:intron | 25.0% |
| ! | AATCATAGAACGATCATTAA+GGG | - | chr8_2:69888745-69888764 | Msa1265510:intron | 25.0% |
| ! | AGTGAAAAAAGATGGAAATA+CGG | + | chr8_2:69888934-69888953 | None:intergenic | 25.0% |
| !!! | TTTCCATCTTTTTTCACTTT+TGG | - | chr8_2:69888936-69888955 | Msa1265510:intron | 25.0% |
| !!! | TTCCATCTTTTTTCACTTTT+GGG | - | chr8_2:69888937-69888956 | Msa1265510:intron | 25.0% |
| ! | ACTCCTTATCCTAAATAAAT+AGG | - | chr8_2:69889099-69889118 | Msa1265510:intron | 25.0% |
| ! | ATAATATGGAAACTAATCCT+AGG | - | chr8_2:69889140-69889159 | Msa1265510:intron | 25.0% |
| ! | AATATCTTAGATAATCTCCT+AGG | + | chr8_2:69889160-69889179 | None:intergenic | 25.0% |
| !! | GAGATTATCTAAGATATTCT+TGG | - | chr8_2:69889162-69889181 | Msa1265510:intron | 25.0% |
| ! | TGACATTAGAATAAGATTGA+AGG | + | chr8_2:69889300-69889319 | None:intergenic | 25.0% |
| ! | AATAGTAAAAAACTCCAATC+TGG | - | chr8_2:69889336-69889355 | Msa1265510:intron | 25.0% |
| ! | ATAGTAAAAAACTCCAATCT+GGG | - | chr8_2:69889337-69889356 | Msa1265510:intron | 25.0% |
| ! | TTGCTTCTATTAAGTAGTAA+AGG | + | chr8_2:69889483-69889502 | None:intergenic | 25.0% |
| ! | TCATGTGTTTATATTTGACA+AGG | + | chr8_2:69889648-69889667 | None:intergenic | 25.0% |
| ! | AAACAAAGAGGAAAAACAAA+AGG | - | chr8_2:69890029-69890048 | Msa1265510:intron | 25.0% |
| ! | AACAAAGAGGAAAAACAAAA+GGG | - | chr8_2:69890030-69890049 | Msa1265510:intron | 25.0% |
| ! | ATGATATAGAAACTAATCCT+AGG | - | chr8_2:69890315-69890334 | Msa1265510:intron | 25.0% |
| ! | TGTAGTTTATCTCATACTAT+AGG | + | chr8_2:69890365-69890384 | None:intergenic | 25.0% |
| ! | ATTTCTGTTCTGTGAAAATT+AGG | - | chr8_2:69890575-69890594 | Msa1265510:intron | 25.0% |
| ! | TTTCTGTTCTGTGAAAATTA+GGG | - | chr8_2:69890576-69890595 | Msa1265510:intron | 25.0% |
| !!! | CAATTTTAAATAAAGCATCC+AGG | + | chr8_2:69890656-69890675 | None:intergenic | 25.0% |
| !!! | CTGGATGCTTTATTTAAAAT+TGG | - | chr8_2:69890654-69890673 | Msa1265510:intron | 25.0% |
| !! | CTTTATTTAAAATTGGAGAC+TGG | - | chr8_2:69890661-69890680 | Msa1265510:intron | 25.0% |
| !!! | TTATTTCTGAGGTTTTTGTT+TGG | - | chr8_2:69890840-69890859 | Msa1265510:intron | 25.0% |
| !!! | TATTTCTGAGGTTTTTGTTT+GGG | - | chr8_2:69890841-69890860 | Msa1265510:intron | 25.0% |
| ! | AATGGAACACATATTAAACA+GGG | + | chr8_2:69890982-69891001 | None:intergenic | 25.0% |
| ! | TAATGGAACACATATTAAAC+AGG | + | chr8_2:69890983-69891002 | None:intergenic | 25.0% |
| ! | CATAGGGCTTAAAAATATAA+TGG | + | chr8_2:69891000-69891019 | None:intergenic | 25.0% |
| !! | CATTGCATCTTTGAAAATTT+AGG | + | chr8_2:69891067-69891086 | None:intergenic | 25.0% |
| ! | ATGATGCTTATGAATGAAAT+TGG | - | chr8_2:69891226-69891245 | Msa1265510:CDS | 25.0% |
| !! | TGCATATAGGTAATATCTTT+TGG | - | chr8_2:69891385-69891404 | Msa1265510:CDS | 25.0% |
| !! | ATATAGGTAATATCTTTTGG+TGG | - | chr8_2:69891388-69891407 | Msa1265510:CDS | 25.0% |
| !!! | AATGTCCAGTGTAATTTTTT+CGG | - | chr8_2:69891551-69891570 | Msa1265510:CDS | 25.0% |
| ! | ATATCAATTACATAGGACAT+TGG | + | chr8_2:69891656-69891675 | None:intergenic | 25.0% |
| GAGCAAAGATGTTTATTACA+GGG | - | chr8_2:69887313-69887332 | Msa1265510:three_prime_UTR | 30.0% | |
| GGTAAAATTGAACAAACCTT+AGG | + | chr8_2:69887972-69887991 | None:intergenic | 30.0% | |
| !!! | GAAGATTTTGACTTGCTATT+AGG | - | chr8_2:69888027-69888046 | Msa1265510:intron | 30.0% |
| !!! | TTTTGACTTGCTATTAGGTT+AGG | - | chr8_2:69888032-69888051 | Msa1265510:intron | 30.0% |
| !! | TTTGACTTGCTATTAGGTTA+GGG | - | chr8_2:69888033-69888052 | Msa1265510:intron | 30.0% |
| TAGCTCCAATTCAAATTAAC+AGG | + | chr8_2:69888144-69888163 | None:intergenic | 30.0% | |
| TGAATTGGAGCTAAAATTGT+AGG | - | chr8_2:69888151-69888170 | Msa1265510:intron | 30.0% | |
| ! | TGATTAGTTCAATATTGTGG+TGG | - | chr8_2:69888222-69888241 | Msa1265510:intron | 30.0% |
| TTCAATATTGTGGTGGTTAA+TGG | - | chr8_2:69888229-69888248 | Msa1265510:intron | 30.0% | |
| TCTTCTTCTCTAATTCATTG+TGG | - | chr8_2:69888454-69888473 | Msa1265510:intron | 30.0% | |
| CTTCTTCTCTAATTCATTGT+GGG | - | chr8_2:69888455-69888474 | Msa1265510:intron | 30.0% | |
| ! | ATCACAAAACTCTCCATTTT+GGG | + | chr8_2:69888556-69888575 | None:intergenic | 30.0% |
| GACCTGTAAATGTATTTGTT+AGG | - | chr8_2:69888668-69888687 | Msa1265510:intron | 30.0% | |
| TATGATTGTTTAGTCTCTCT+CGG | + | chr8_2:69888732-69888751 | None:intergenic | 30.0% | |
| CAATCATAGAACGATCATTA+AGG | - | chr8_2:69888744-69888763 | Msa1265510:intron | 30.0% | |
| AACGATCATTAAGGGATATT+TGG | - | chr8_2:69888753-69888772 | Msa1265510:intron | 30.0% | |
| GTGAAAAAAGATGGAAATAC+GGG | + | chr8_2:69888933-69888952 | None:intergenic | 30.0% | |
| !!! | TCCATCTTTTTTCACTTTTG+GGG | - | chr8_2:69888938-69888957 | Msa1265510:intron | 30.0% |
| !!! | TTTTTTCACTTTTGGGGAAA+TGG | - | chr8_2:69888944-69888963 | Msa1265510:intron | 30.0% |
| AAACATTAGTCCCTATGTAT+AGG | - | chr8_2:69889068-69889087 | Msa1265510:intron | 30.0% | |
| AACATTAGTCCCTATGTATA+GGG | - | chr8_2:69889069-69889088 | Msa1265510:intron | 30.0% | |
| TTACAAATGGTTTATCTCAC+AGG | + | chr8_2:69889201-69889220 | None:intergenic | 30.0% | |
| GTTACAGTTTCTCTTTCAAA+TGG | + | chr8_2:69889232-69889251 | None:intergenic | 30.0% | |
| TGAAAGAGAAACTGTAACAA+TGG | - | chr8_2:69889234-69889253 | Msa1265510:intron | 30.0% | |
| AACCAGAAAAACAAAATCCA+AGG | - | chr8_2:69889702-69889721 | Msa1265510:intron | 30.0% | |
| ACCAGAAAAACAAAATCCAA+GGG | - | chr8_2:69889703-69889722 | Msa1265510:intron | 30.0% | |
| TGTTTAATTGTAATCTCCCT+TGG | + | chr8_2:69889722-69889741 | None:intergenic | 30.0% | |
| TCAAAGCAAGACAAATCTAA+TGG | - | chr8_2:69889844-69889863 | Msa1265510:intron | 30.0% | |
| !! | TTTTTCGTGAAACTTGTTCA+CGG | - | chr8_2:69889874-69889893 | Msa1265510:intron | 30.0% |
| !! | TTTTTCCTCTTTGTTTCAGA+GGG | + | chr8_2:69890025-69890044 | None:intergenic | 30.0% |
| ! | AGAAGCTGTGAACATAATTT+TGG | + | chr8_2:69890433-69890452 | None:intergenic | 30.0% |
| TTACATAACATGTCCAAGTA+TGG | + | chr8_2:69890517-69890536 | None:intergenic | 30.0% | |
| TACTTGGACATGTTATGTAA+TGG | - | chr8_2:69890517-69890536 | Msa1265510:intron | 30.0% | |
| ATCAAAGATTTGATGTGTGT+TGG | - | chr8_2:69890547-69890566 | Msa1265510:intron | 30.0% | |
| TAGAATCAACTTATCTTTCC+TGG | - | chr8_2:69890635-69890654 | Msa1265510:intron | 30.0% | |
| !! | TTTAGCAAGTAGCTTTAGAA+AGG | - | chr8_2:69890875-69890894 | Msa1265510:intron | 30.0% |
| TAACTGAGAGATTACATGAT+TGG | - | chr8_2:69890914-69890933 | Msa1265510:intron | 30.0% | |
| AGATTACATGATTGGCAATA+AGG | - | chr8_2:69890922-69890941 | Msa1265510:intron | 30.0% | |
| CAAGTAAAAATATCCACATC+AGG | + | chr8_2:69891097-69891116 | None:intergenic | 30.0% | |
| TTTCATTCATAAGCATCATG+TGG | + | chr8_2:69891225-69891244 | None:intergenic | 30.0% | |
| ! | TCGTAGTTTTCATTGCATAT+AGG | - | chr8_2:69891372-69891391 | Msa1265510:CDS | 30.0% |
| GTGTGTCAAAAAAAAACAAG+AGG | + | chr8_2:69891485-69891504 | None:intergenic | 30.0% | |
| TGTAGGTTATGTTAGTTAGT+AGG | - | chr8_2:69891587-69891606 | Msa1265510:CDS | 30.0% | |
| GTAGGTTATGTTAGTTAGTA+GGG | - | chr8_2:69891588-69891607 | Msa1265510:CDS | 30.0% | |
| GGAGCAAAGATGTTTATTAC+AGG | - | chr8_2:69887312-69887331 | Msa1265510:three_prime_UTR | 35.0% | |
| TTCGTCTCTTTGTGTTCTTT+CGG | + | chr8_2:69887657-69887676 | None:intergenic | 35.0% | |
| ATCGAGATGATGAAGATGAT+GGG | - | chr8_2:69887774-69887793 | Msa1265510:intron | 35.0% | |
| TTAGTGGAATCAAAACCAAC+AGG | + | chr8_2:69887804-69887823 | None:intergenic | 35.0% | |
| !!! | TGTTGGTTTTGATTCCACTA+AGG | - | chr8_2:69887803-69887822 | Msa1265510:intron | 35.0% |
| !!! | GTTGGTTTTGATTCCACTAA+GGG | - | chr8_2:69887804-69887823 | Msa1265510:intron | 35.0% |
| !! | GATTCGTTCTGTTTTTCCTA+AGG | - | chr8_2:69887953-69887972 | Msa1265510:intron | 35.0% |
| ! | GGTTAGGGTTTAGCTTAAAT+CGG | - | chr8_2:69888048-69888067 | Msa1265510:intron | 35.0% |
| GAACTAATCACAAGCTATTC+AGG | + | chr8_2:69888212-69888231 | None:intergenic | 35.0% | |
| GTTAATGGTTATCAGCATTC+TGG | - | chr8_2:69888244-69888263 | Msa1265510:intron | 35.0% | |
| TAAAAGTTGCAGATTCACTC+TGG | - | chr8_2:69888364-69888383 | Msa1265510:intron | 35.0% | |
| !! | TATTGGTGTTGTTGTACTTG+AGG | - | chr8_2:69888396-69888415 | Msa1265510:intron | 35.0% |
| ATGAATTAGAGAAGAAGACG+AGG | + | chr8_2:69888452-69888471 | None:intergenic | 35.0% | |
| AGAGAGGATGAGAAAAGTAA+AGG | + | chr8_2:69888501-69888520 | None:intergenic | 35.0% | |
| ! | ACTTTTCTCATCCTCTCTTT+TGG | - | chr8_2:69888503-69888522 | Msa1265510:intron | 35.0% |
| ! | TCACAAAACTCTCCATTTTG+GGG | + | chr8_2:69888555-69888574 | None:intergenic | 35.0% |
| ! | CATCACAAAACTCTCCATTT+TGG | + | chr8_2:69888557-69888576 | None:intergenic | 35.0% |
| CACTTTACAATCTTCTCTAC+AGG | + | chr8_2:69888616-69888635 | None:intergenic | 35.0% | |
| GTATTTCACTATTCCCCATT+TGG | + | chr8_2:69888702-69888721 | None:intergenic | 35.0% | |
| GGGAATAGTGAAATACTTAG+AGG | - | chr8_2:69888706-69888725 | Msa1265510:intron | 35.0% | |
| ATAGTTCATGACACGACTTT+AGG | - | chr8_2:69888796-69888815 | Msa1265510:intron | 35.0% | |
| TCGTCACTTGATTCATATAG+TGG | - | chr8_2:69888819-69888838 | Msa1265510:intron | 35.0% | |
| !! | ATCCTGTAGAAGGTATTGAA+TGG | - | chr8_2:69888842-69888861 | Msa1265510:intron | 35.0% |
| TTCTACTATGTTGCAAGTCA+TGG | - | chr8_2:69888890-69888909 | Msa1265510:intron | 35.0% | |
| TCCCCAAAAGTGAAAAAAGA+TGG | + | chr8_2:69888942-69888961 | None:intergenic | 35.0% | |
| GTCTTGTATCCCTATACATA+GGG | + | chr8_2:69889081-69889100 | None:intergenic | 35.0% | |
| ! | AGTCTTGTATCCCTATACAT+AGG | + | chr8_2:69889082-69889101 | None:intergenic | 35.0% |
| ! | CTTTCCTACTTGAAGCATTA+CGG | + | chr8_2:69889370-69889389 | None:intergenic | 35.0% |
| !! | GAGTTGTGGCTTTTGATTAA+TGG | + | chr8_2:69889457-69889476 | None:intergenic | 35.0% |
| TTATCTAGGCGGTTAAGATT+TGG | + | chr8_2:69889538-69889557 | None:intergenic | 35.0% | |
| ! | GGATTATCCGACAATGATTT+TGG | + | chr8_2:69889610-69889629 | None:intergenic | 35.0% |
| !!! | TCCCTTGGATTTTGTTTTTC+TGG | + | chr8_2:69889707-69889726 | None:intergenic | 35.0% |
| ATGGGTTTGAATCCTTGTTA+TGG | + | chr8_2:69889758-69889777 | None:intergenic | 35.0% | |
| AAGCAAGACAAATCTAATGG+TGG | - | chr8_2:69889847-69889866 | Msa1265510:intron | 35.0% | |
| !! | GTTTTTCCTCTTTGTTTCAG+AGG | + | chr8_2:69890026-69890045 | None:intergenic | 35.0% |
| ! | AGTCTTGTACCTCTATAAAG+GGG | + | chr8_2:69890263-69890282 | None:intergenic | 35.0% |
| ! | GAGTCTTGTACCTCTATAAA+GGG | + | chr8_2:69890264-69890283 | None:intergenic | 35.0% |
| ! | TGAGTCTTGTACCTCTATAA+AGG | + | chr8_2:69890265-69890284 | None:intergenic | 35.0% |
| CACATCTTGTATTATCTCCT+AGG | + | chr8_2:69890335-69890354 | None:intergenic | 35.0% | |
| AAAGATTTGATGTGTGTTGG+AGG | - | chr8_2:69890550-69890569 | Msa1265510:intron | 35.0% | |
| AAGATTTGATGTGTGTTGGA+GGG | - | chr8_2:69890551-69890570 | Msa1265510:intron | 35.0% | |
| AGAACAGATGTGAATTGTGA+TGG | - | chr8_2:69890719-69890738 | Msa1265510:intron | 35.0% | |
| GAACAGATGTGAATTGTGAT+GGG | - | chr8_2:69890720-69890739 | Msa1265510:intron | 35.0% | |
| AACAGATGTGAATTGTGATG+GGG | - | chr8_2:69890721-69890740 | Msa1265510:intron | 35.0% | |
| ACTACTCGAGTATAGCTAAA+AGG | + | chr8_2:69891142-69891161 | None:intergenic | 35.0% | |
| ATTCATAAGCATCATGTGGT+TGG | + | chr8_2:69891221-69891240 | None:intergenic | 35.0% | |
| ! | TAGGTAATATCTTTTGGTGG+CGG | - | chr8_2:69891391-69891410 | Msa1265510:CDS | 35.0% |
| TCGTTCCGAAAAAATTACAC+TGG | + | chr8_2:69891559-69891578 | None:intergenic | 35.0% | |
| ACACAAAGAGACGAAGAAAG+TGG | - | chr8_2:69887662-69887681 | Msa1265510:intron | 40.0% | |
| CAGCAAAAGCAGAAAGAGAA+TGG | - | chr8_2:69887723-69887742 | Msa1265510:intron | 40.0% | |
| GATCGAGATGATGAAGATGA+TGG | - | chr8_2:69887773-69887792 | Msa1265510:intron | 40.0% | |
| !! | AAGATGATGGGAATTCCTGT+TGG | - | chr8_2:69887786-69887805 | Msa1265510:intron | 40.0% |
| GTGTTAGAGCTGTTACGAAA+CGG | - | chr8_2:69887856-69887875 | Msa1265510:intron | 40.0% | |
| ! | CTCTAATTCATTGTGGGTTG+TGG | - | chr8_2:69888461-69888480 | Msa1265510:intron | 40.0% |
| ATACTTGCCATACTCAGAGT+AGG | + | chr8_2:69888529-69888548 | None:intergenic | 40.0% | |
| GGCAAGTATTATCCCCAAAA+TGG | - | chr8_2:69888540-69888559 | Msa1265510:intron | 40.0% | |
| AAGTGTCAAGCTTGAGTGAT+TGG | - | chr8_2:69888631-69888650 | Msa1265510:intron | 40.0% | |
| TGTTAGGAAGGTAGACCAAA+TGG | - | chr8_2:69888684-69888703 | Msa1265510:intron | 40.0% | |
| GTTAGGAAGGTAGACCAAAT+GGG | - | chr8_2:69888685-69888704 | Msa1265510:intron | 40.0% | |
| TTAGGAAGGTAGACCAAATG+GGG | - | chr8_2:69888686-69888705 | Msa1265510:intron | 40.0% | |
| !! | CATATAGTGGATCCTGTAGA+AGG | - | chr8_2:69888832-69888851 | Msa1265510:intron | 40.0% |
| CACCATTCAATACCTTCTAC+AGG | + | chr8_2:69888847-69888866 | None:intergenic | 40.0% | |
| !! | CTGTAGAAGGTATTGAATGG+TGG | - | chr8_2:69888845-69888864 | Msa1265510:intron | 40.0% |
| TATGTTGCAAGTCATGGTAG+TGG | - | chr8_2:69888896-69888915 | Msa1265510:intron | 40.0% | |
| ACCTGATGTACTTACTTGCT+AGG | - | chr8_2:69889265-69889284 | Msa1265510:intron | 40.0% | |
| TCCTAGCAAGTAAGTACATC+AGG | + | chr8_2:69889269-69889288 | None:intergenic | 40.0% | |
| ATTGCCGTAATGCTTCAAGT+AGG | - | chr8_2:69889363-69889382 | Msa1265510:intron | 40.0% | |
| CTTGAGAAGTTGCTTGTTCT+TGG | + | chr8_2:69889406-69889425 | None:intergenic | 40.0% | |
| CAAGAACAAGCAACTTCTCA+AGG | - | chr8_2:69889404-69889423 | Msa1265510:intron | 40.0% | |
| ! | AGTAGTAAAGGCTTGAGTTG+TGG | + | chr8_2:69889471-69889490 | None:intergenic | 40.0% |
| TTGGCAGCTAATGTCTTATG+TGG | + | chr8_2:69889519-69889538 | None:intergenic | 40.0% | |
| GTTTCAGCTTCTTATCTAGG+CGG | + | chr8_2:69889549-69889568 | None:intergenic | 40.0% | |
| CGTGTTTCAGCTTCTTATCT+AGG | + | chr8_2:69889552-69889571 | None:intergenic | 40.0% | |
| TGTCAGCTTATTCTGTAGAC+AGG | + | chr8_2:69889582-69889601 | None:intergenic | 40.0% | |
| TGTCTACAGAATAAGCTGAC+AGG | - | chr8_2:69889581-69889600 | Msa1265510:intron | 40.0% | |
| GTCTACAGAATAAGCTGACA+GGG | - | chr8_2:69889582-69889601 | Msa1265510:intron | 40.0% | |
| CAGGGAACCAAAATCATTGT+CGG | - | chr8_2:69889600-69889619 | Msa1265510:intron | 40.0% | |
| ACAAGGCTTTGCTCATAGTT+GGG | + | chr8_2:69889631-69889650 | None:intergenic | 40.0% | |
| AGGATTCAAACCCATTACCT+AGG | - | chr8_2:69889763-69889782 | Msa1265510:intron | 40.0% | |
| GGATTCAAACCCATTACCTA+GGG | - | chr8_2:69889764-69889783 | Msa1265510:intron | 40.0% | |
| AAGGATGCTTCCATAGACTT+AGG | + | chr8_2:69889790-69889809 | None:intergenic | 40.0% | |
| TCTAAAAGTCCCTATAGCTC+AGG | + | chr8_2:69889824-69889843 | None:intergenic | 40.0% | |
| AAAACGTAGCAACCAACAGA+GGG | - | chr8_2:69889953-69889972 | Msa1265510:intron | 40.0% | |
| TCCAGTTTAATCTGCACTGT+TGG | + | chr8_2:69889985-69890004 | None:intergenic | 40.0% | |
| ! | TCTTTGTTTCAGAGGGTTAC+TGG | + | chr8_2:69890018-69890037 | None:intergenic | 40.0% |
| !! | AGTAACCCTCTGAAACAAAG+AGG | - | chr8_2:69890017-69890036 | Msa1265510:intron | 40.0% |
| !! | TTCCCAACCTTTCTGAAACT+CGG | - | chr8_2:69890090-69890109 | Msa1265510:intron | 40.0% |
| AGATCACAAAGGATCAAACC+AGG | - | chr8_2:69890133-69890152 | Msa1265510:intron | 40.0% | |
| ! | TCAACATGATATCTAGAGCC+TGG | + | chr8_2:69890154-69890173 | None:intergenic | 40.0% |
| TCTTGTACCTCTATAAAGGG+GGG | + | chr8_2:69890261-69890280 | None:intergenic | 40.0% | |
| GTCTTGTACCTCTATAAAGG+GGG | + | chr8_2:69890262-69890281 | None:intergenic | 40.0% | |
| CTGCTAGAAACAAACACCAT+CGG | - | chr8_2:69890459-69890478 | Msa1265510:intron | 40.0% | |
| ATTCTTGTCGATGCCATACT+TGG | - | chr8_2:69890501-69890520 | Msa1265510:intron | 40.0% | |
| TGATTTATTGGGTGCACTGT+TGG | - | chr8_2:69890805-69890824 | Msa1265510:intron | 40.0% | |
| GCAGAACATATCGTCTCATA+GGG | + | chr8_2:69891016-69891035 | None:intergenic | 40.0% | |
| AGCAGAACATATCGTCTCAT+AGG | + | chr8_2:69891017-69891036 | None:intergenic | 40.0% | |
| GCAATGCTAATTTCCTGATG+TGG | - | chr8_2:69891081-69891100 | Msa1265510:intron | 40.0% | |
| TTACTTGTATACGCTCACGT+TGG | - | chr8_2:69891110-69891129 | Msa1265510:intron | 40.0% | |
| TGGTGGAAACTAAAGAAGCA+AGG | - | chr8_2:69891448-69891467 | Msa1265510:CDS | 40.0% | |
| ATTGAGCTGAAGGTAGCAAA+GGG | + | chr8_2:69891534-69891553 | None:intergenic | 40.0% | |
| TCGGAACGACAAACATTTGT+AGG | - | chr8_2:69891570-69891589 | Msa1265510:CDS | 40.0% | |
| ACTAAGGGAAAACCAGTACC+CGG | - | chr8_2:69887819-69887838 | Msa1265510:intron | 45.0% | |
| CGACGATTCATATACTGCCT+CGG | + | chr8_2:69887885-69887904 | None:intergenic | 45.0% | |
| AGGCAGTATATGAATCGTCG+TGG | - | chr8_2:69887885-69887904 | Msa1265510:intron | 45.0% | |
| GGCAGTATATGAATCGTCGT+GGG | - | chr8_2:69887886-69887905 | Msa1265510:intron | 45.0% | |
| GCAGTATATGAATCGTCGTG+GGG | - | chr8_2:69887887-69887906 | Msa1265510:intron | 45.0% | |
| CAGTATATGAATCGTCGTGG+GGG | - | chr8_2:69887888-69887907 | Msa1265510:intron | 45.0% | |
| CACTCTGGCACACTCTTTAT+TGG | - | chr8_2:69888379-69888398 | Msa1265510:intron | 45.0% | |
| GAAGAAGACGAGGTGAACTA+CGG | + | chr8_2:69888442-69888461 | None:intergenic | 45.0% | |
| ! | CTTTTGGCCTACTCTGAGTA+TGG | - | chr8_2:69888519-69888538 | Msa1265510:intron | 45.0% |
| TTACGGCAATGTTCCCAGAT+TGG | + | chr8_2:69889353-69889372 | None:intergenic | 45.0% | |
| CTCAAGGCTGCTTAACCATT+TGG | - | chr8_2:69889420-69889439 | Msa1265510:intron | 45.0% | |
| ATGGTTCAGTGCTAGCCAAA+TGG | + | chr8_2:69889438-69889457 | None:intergenic | 45.0% | |
| GCAGCTAATGTCTTATGTGG+TGG | + | chr8_2:69889516-69889535 | None:intergenic | 45.0% | |
| GACAAGGCTTTGCTCATAGT+TGG | + | chr8_2:69889632-69889651 | None:intergenic | 45.0% | |
| ! | AAGAAGTGGGCTCCATAACA+AGG | - | chr8_2:69889743-69889762 | Msa1265510:intron | 45.0% |
| AGACTTAGGCCCTAGGTAAT+GGG | + | chr8_2:69889776-69889795 | None:intergenic | 45.0% | |
| TAGACTTAGGCCCTAGGTAA+TGG | + | chr8_2:69889777-69889796 | None:intergenic | 45.0% | |
| TTACCTAGGGCCTAAGTCTA+TGG | - | chr8_2:69889777-69889796 | Msa1265510:intron | 45.0% | |
| TGTTTCACCACCTGAGCTAT+AGG | - | chr8_2:69889811-69889830 | Msa1265510:intron | 45.0% | |
| GTTTCACCACCTGAGCTATA+GGG | - | chr8_2:69889812-69889831 | Msa1265510:intron | 45.0% | |
| AAAAGTCCCTATAGCTCAGG+TGG | + | chr8_2:69889821-69889840 | None:intergenic | 45.0% | |
| ! | TTCGTGAAACTTGTTCACGG+TGG | - | chr8_2:69889877-69889896 | Msa1265510:intron | 45.0% |
| GCCTGAAGTTATAGCTGCTA+GGG | - | chr8_2:69889921-69889940 | Msa1265510:intron | 45.0% | |
| ACCCTAGCAGCTATAACTTC+AGG | + | chr8_2:69889925-69889944 | None:intergenic | 45.0% | |
| AAGTTATAGCTGCTAGGGTG+AGG | - | chr8_2:69889926-69889945 | Msa1265510:intron | 45.0% | |
| AGTTATAGCTGCTAGGGTGA+GGG | - | chr8_2:69889927-69889946 | Msa1265510:intron | 45.0% | |
| GAAAACGTAGCAACCAACAG+AGG | - | chr8_2:69889952-69889971 | Msa1265510:intron | 45.0% | |
| GCCAACAGTGCAGATTAAAC+TGG | - | chr8_2:69889981-69890000 | Msa1265510:intron | 45.0% | |
| ACACTAACCCCCCTTTATAG+AGG | - | chr8_2:69890251-69890270 | Msa1265510:intron | 45.0% | |
| !! | GTTTGCACGCGTTGATTTCT+AGG | - | chr8_2:69891164-69891183 | Msa1265510:CDS | 45.0% |
| !! | TTTGGTGGCGGTTCAATCTT+TGG | - | chr8_2:69891403-69891422 | Msa1265510:CDS | 45.0% |
| !! | TTGGTGGCGGTTCAATCTTT+GGG | - | chr8_2:69891404-69891423 | Msa1265510:CDS | 45.0% |
| ! | TCAATCTTTGGGAAGCCTGA+AGG | - | chr8_2:69891415-69891434 | Msa1265510:CDS | 45.0% |
| CATTGAGCTGAAGGTAGCAA+AGG | + | chr8_2:69891535-69891554 | None:intergenic | 45.0% | |
| TACACTGGACATTGAGCTGA+AGG | + | chr8_2:69891544-69891563 | None:intergenic | 45.0% | |
| GTCAGCTCGATTGAAGAGTT+AGG | + | chr8_2:69891624-69891643 | None:intergenic | 45.0% | |
| TTCAATCGAGCTGACTGCTT+GGG | - | chr8_2:69891629-69891648 | Msa1265510:CDS | 45.0% | |
| !! | ATTAATTATTAATGATTTAT+TGG | - | chr8_2:69890793-69890812 | Msa1265510:intron | 5.0% |
| !! | TTAATTATTAATGATTTATT+GGG | - | chr8_2:69890794-69890813 | Msa1265510:intron | 5.0% |
| ! | GTCGCTCATGGTGGAAGATA+GGG | + | chr8_2:69887370-69887389 | None:intergenic | 50.0% |
| TTCGCTCTCTTTCTCTGTCG+CGG | + | chr8_2:69887404-69887423 | None:intergenic | 50.0% | |
| ! | TTCTTTCGGCTCGTCATCGA+CGG | + | chr8_2:69887643-69887662 | None:intergenic | 50.0% |
| GTGGTGTCTGACTTCGTTGA+CGG | - | chr8_2:69887681-69887700 | Msa1265510:intron | 50.0% | |
| !!! | GGGTACTGGTTTTCCCTTAG+TGG | + | chr8_2:69887820-69887839 | None:intergenic | 50.0% |
| CGATTCTTCTCAGCAGGCAA+TGG | + | chr8_2:69887924-69887943 | None:intergenic | 50.0% | |
| CCTGCTGAGAAGAATCGCTA+GGG | - | chr8_2:69887927-69887946 | Msa1265510:intron | 50.0% | |
| ! | TGTGGGTTGTGGTTGCTGTT+TGG | - | chr8_2:69888472-69888491 | Msa1265510:intron | 50.0% |
| CTCAGAGTAGGCCAAAAGAG+AGG | + | chr8_2:69888517-69888536 | None:intergenic | 50.0% | |
| CTTCCATAGACTTAGGCCCT+AGG | + | chr8_2:69889783-69889802 | None:intergenic | 50.0% | |
| AGCTCAGGTGGTGAAACACA+AGG | + | chr8_2:69889809-69889828 | None:intergenic | 50.0% | |
| ! | GTGAAACTTGTTCACGGTGG+CGG | - | chr8_2:69889880-69889899 | Msa1265510:intron | 50.0% |
| GGCCTGAAGTTATAGCTGCT+AGG | - | chr8_2:69889920-69889939 | Msa1265510:intron | 50.0% | |
| CGCCGAGTTTCAGAAAGGTT+GGG | + | chr8_2:69890095-69890114 | None:intergenic | 50.0% | |
| !! | CCAACCTTTCTGAAACTCGG+CGG | - | chr8_2:69890093-69890112 | Msa1265510:intron | 50.0% |
| ! | AGTGACGGGACAGATCACAA+AGG | - | chr8_2:69890122-69890141 | Msa1265510:intron | 50.0% |
| ACAAACACCATCGGATGCGT+AGG | - | chr8_2:69890468-69890487 | Msa1265510:intron | 50.0% | |
| AGCCTGAAGGCAGAAACAGT+TGG | - | chr8_2:69891428-69891447 | Msa1265510:CDS | 50.0% | |
| !! | CACCAACTGTTTCTGCCTTC+AGG | + | chr8_2:69891433-69891452 | None:intergenic | 50.0% |
| CTGAAGGCAGAAACAGTTGG+TGG | - | chr8_2:69891431-69891450 | Msa1265510:CDS | 50.0% | |
| CTTCAATCGAGCTGACTGCT+TGG | - | chr8_2:69891628-69891647 | Msa1265510:CDS | 50.0% | |
| ! | GGTCGCTCATGGTGGAAGAT+AGG | + | chr8_2:69887371-69887390 | None:intergenic | 55.0% |
| TGCGATCACGATCGACGTCA+CGG | + | chr8_2:69887449-69887468 | None:intergenic | 55.0% | |
| TCTTGCTGCGTGCTCTGTCA+CGG | + | chr8_2:69887485-69887504 | None:intergenic | 55.0% | |
| ACGGTCAGGTGAACGTGTAC+GGG | + | chr8_2:69887511-69887530 | None:intergenic | 55.0% | |
| CACGGTCAGGTGAACGTGTA+CGG | + | chr8_2:69887512-69887531 | None:intergenic | 55.0% | |
| ! | GAGAGTGACGAGAGCGTACA+CGG | + | chr8_2:69887530-69887549 | None:intergenic | 55.0% |
| ! | GAGGGTCTGGAGAAGGTGTA+CGG | + | chr8_2:69887596-69887615 | None:intergenic | 55.0% |
| TTTCTCGGAGGGTCTGGAGA+AGG | + | chr8_2:69887603-69887622 | None:intergenic | 55.0% | |
| CTTCGTTGACGGAATCGCGA+AGG | - | chr8_2:69887692-69887711 | Msa1265510:intron | 55.0% | |
| GCCTGCTGAGAAGAATCGCT+AGG | - | chr8_2:69887926-69887945 | Msa1265510:intron | 55.0% | |
| CCCTAGCGATTCTTCTCAGC+AGG | + | chr8_2:69887930-69887949 | None:intergenic | 55.0% | |
| GAAGACGAGGTGAACTACGG+AGG | + | chr8_2:69888439-69888458 | None:intergenic | 55.0% | |
| ACGTAGCAACCAACAGAGGG+AGG | - | chr8_2:69889956-69889975 | Msa1265510:intron | 55.0% | |
| !! | TGTTGGCTTCCTCCCTCTGT+TGG | + | chr8_2:69889968-69889987 | None:intergenic | 55.0% |
| CCGCCGAGTTTCAGAAAGGT+TGG | + | chr8_2:69890096-69890115 | None:intergenic | 55.0% | |
| !! | ACCTTTCTGAAACTCGGCGG+TGG | - | chr8_2:69890096-69890115 | Msa1265510:intron | 55.0% |
| TCCACCGCCGAGTTTCAGAA+AGG | + | chr8_2:69890100-69890119 | None:intergenic | 55.0% | |
| ACTCGGCGGTGGAATAGTGA+CGG | - | chr8_2:69890107-69890126 | Msa1265510:intron | 55.0% | |
| GCTCTCTTTCTCTGTCGCGG+TGG | + | chr8_2:69887401-69887420 | None:intergenic | 60.0% | |
| CTCTGTCACGGTCACGGTCA+CGG | + | chr8_2:69887473-69887492 | None:intergenic | 60.0% | |
| TGCGTGCTCTGTCACGGTCA+CGG | + | chr8_2:69887479-69887498 | None:intergenic | 60.0% | |
| ! | TGACGAGAGCGTACACGGTC+AGG | + | chr8_2:69887525-69887544 | None:intergenic | 60.0% |
| ! | CTGGAGAAGGTGTACGGTGG+TGG | + | chr8_2:69887590-69887609 | None:intergenic | 60.0% |
| ! | GGTCTGGAGAAGGTGTACGG+TGG | + | chr8_2:69887593-69887612 | None:intergenic | 60.0% |
| TGACGCTTTCTCGGAGGGTC+TGG | + | chr8_2:69887609-69887628 | None:intergenic | 60.0% | |
| !! | ACCCTCCGAGAAAGCGTCAC+CGG | - | chr8_2:69887610-69887629 | Msa1265510:three_prime_UTR | 60.0% |
| TCACGCCGGTGACGCTTTCT+CGG | + | chr8_2:69887618-69887637 | None:intergenic | 60.0% | |
| CGTCATCGACGGAATCACGC+CGG | + | chr8_2:69887632-69887651 | None:intergenic | 60.0% | |
| AACACCGCTGACGTCAGCAC+CGG | + | chr8_2:69887841-69887860 | None:intergenic | 60.0% | |
| CTGTTACGAAACGGCAGCCG+AGG | - | chr8_2:69887865-69887884 | Msa1265510:intron | 60.0% | |
| GACGAGGTGAACTACGGAGG+AGG | + | chr8_2:69888436-69888455 | None:intergenic | 60.0% | |
| ! | AACTTGTTCACGGTGGCGGC+CGG | - | chr8_2:69889884-69889903 | Msa1265510:intron | 60.0% |
| CTCGGCGGTGGAATAGTGAC+GGG | - | chr8_2:69890108-69890127 | Msa1265510:intron | 60.0% | |
| ACACCATCGGATGCGTAGGC+TGG | - | chr8_2:69890472-69890491 | Msa1265510:intron | 60.0% | |
| TCACCAGCCTACGCATCCGA+TGG | + | chr8_2:69890478-69890497 | None:intergenic | 60.0% | |
| CACGATCGACGTCACGGTCG+CGG | + | chr8_2:69887443-69887462 | None:intergenic | 65.0% | |
| AGAGCGGTCGACGGGAGAAC+GGG | + | chr8_2:69887556-69887575 | None:intergenic | 65.0% | |
| GAGAGCGGTCGACGGGAGAA+CGG | + | chr8_2:69887557-69887576 | None:intergenic | 65.0% | |
| TCGACGGTGAGAGCGGTCGA+CGG | + | chr8_2:69887565-69887584 | None:intergenic | 65.0% | |
| ! | GTGTACGGTGGTGGCGTCGA+CGG | + | chr8_2:69887581-69887600 | None:intergenic | 65.0% |
| GCCGGTGACGCTTTCTCGGA+GGG | + | chr8_2:69887614-69887633 | None:intergenic | 65.0% | |
| ! | CTGACGTCAGCACCGGGTAC+TGG | + | chr8_2:69887834-69887853 | None:intergenic | 65.0% |
| !! | GTACCCGGTGCTGACGTCAG+CGG | - | chr8_2:69887834-69887853 | Msa1265510:intron | 65.0% |
| ACACCGCTGACGTCAGCACC+GGG | + | chr8_2:69887840-69887859 | None:intergenic | 65.0% | |
| GCGCTCACGGTCGCTCATGG+TGG | + | chr8_2:69887379-69887398 | None:intergenic | 70.0% | |
| GTGGCGCTCACGGTCGCTCA+TGG | + | chr8_2:69887382-69887401 | None:intergenic | 70.0% | |
| CTCTGTCGCGGTGGCGCTCA+CGG | + | chr8_2:69887392-69887411 | None:intergenic | 70.0% | |
| CGACGGTGAGAGCGGTCGAC+GGG | + | chr8_2:69887564-69887583 | None:intergenic | 70.0% | |
| !! | GGTGGCGTCGACGGTGAGAG+CGG | + | chr8_2:69887572-69887591 | None:intergenic | 70.0% |
| CGCCGGTGACGCTTTCTCGG+AGG | + | chr8_2:69887615-69887634 | None:intergenic | 70.0% | |
| ! | TTGTTCACGGTGGCGGCCGG+CGG | - | chr8_2:69889887-69889906 | Msa1265510:intron | 70.0% |
| CAGGCCACCATCACCACCGC+CGG | + | chr8_2:69889906-69889925 | None:intergenic | 70.0% | |
| !! | TTCACGGTGGCGGCCGGCGG+TGG | - | chr8_2:69889890-69889909 | Msa1265510:intron | 80.0% |
| ! | GTGGCGGCCGGCGGTGGTGA+TGG | - | chr8_2:69889896-69889915 | Msa1265510:intron | 80.0% |
| !!! | GCGGCCGGCGGTGGTGATGG+TGG | - | chr8_2:69889899-69889918 | Msa1265510:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 69887300 | 69891772 | 69887300 | ID=Msa1265510;Name=Msa1265510 |
| chr8_2 | mRNA | 69887300 | 69891772 | 69887300 | ID=Msa1265510-mRNA-1;Parent=Msa1265510;Name=Msa1265510-mRNA-1;_AED=0.01;_eAED=0.01;_QI=81|0|0.5|1|0|0.5|2|379|188 |
| chr8_2 | exon | 69887300 | 69887678 | 69887300 | ID=Msa1265510-mRNA-1:exon:23162;Parent=Msa1265510-mRNA-1 |
| chr8_2 | exon | 69891125 | 69891772 | 69891125 | ID=Msa1265510-mRNA-1:exon:23161;Parent=Msa1265510-mRNA-1 |
| chr8_2 | five_prime_UTR | 69891692 | 69891772 | 69891692 | ID=Msa1265510-mRNA-1:five_prime_utr;Parent=Msa1265510-mRNA-1 |
| chr8_2 | CDS | 69891125 | 69891691 | 69891125 | ID=Msa1265510-mRNA-1:cds;Parent=Msa1265510-mRNA-1 |
| chr8_2 | three_prime_UTR | 69887300 | 69887678 | 69887300 | ID=Msa1265510-mRNA-1:three_prime_utr;Parent=Msa1265510-mRNA-1 |
| Gene Sequence |
| Protein sequence |
