Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037030 | XP_003625374.2 | 93.856 | 472 | 8 | 3 | 1 | 471 | 1 | 452 | 0.0 | 883 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037030 | sp|Q9FME2|NTF2_ARATH | 34.038 | 426 | 210 | 15 | 1 | 412 | 1 | 369 | 2.20e-46 | 170 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037030 | A0A396H4Q7 | 93.856 | 472 | 8 | 3 | 1 | 471 | 1 | 452 | 0.0 | 883 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016440 | Msa1037030 | 0.809837 | 1.553096e-50 | -8.615850e-47 |
| Msa0042510 | Msa1037030 | 0.802196 | 6.292194e-49 | -8.615850e-47 |
| Msa0610380 | Msa1037030 | 0.808437 | 3.099204e-50 | -8.615850e-47 |
| Msa0621190 | Msa1037030 | 0.839996 | 1.134169e-57 | -8.615850e-47 |
| Msa0650910 | Msa1037030 | 0.812161 | 4.873363e-51 | -8.615850e-47 |
| Msa0724530 | Msa1037030 | 0.800178 | 1.627733e-48 | -8.615850e-47 |
| Msa0121460 | Msa1037030 | -0.800793 | 1.219958e-48 | -8.615850e-47 |
| Msa0188740 | Msa1037030 | 0.813413 | 2.592538e-51 | -8.615850e-47 |
| Msa0382670 | Msa1037030 | 0.801288 | 9.664237e-49 | -8.615850e-47 |
| Msa0426820 | Msa1037030 | 0.803486 | 3.407563e-49 | -8.615850e-47 |
| Msa1037030 | Msa1124980 | 0.835058 | 2.093091e-56 | -8.615850e-47 |
| Msa1037030 | Msa1164520 | 0.982598 | 1.660350e-155 | -8.615850e-47 |
| Msa1037030 | Msa1167360 | 0.809814 | 1.570634e-50 | -8.615850e-47 |
| Msa1037030 | Msa1265510 | 0.811438 | 7.001323e-51 | -8.615850e-47 |
| Msa1037030 | Msa1361510 | 0.815143 | 1.075013e-51 | -8.615850e-47 |
| Msa1037030 | Msa1387750 | 0.828024 | 1.131455e-54 | -8.615850e-47 |
| Msa1037030 | Msa1423050 | 0.808123 | 3.614924e-50 | -8.615850e-47 |
| Msa1037030 | Msa1463510 | 0.803518 | 3.354711e-49 | -8.615850e-47 |
| Msa1037030 | Msa1465890 | 0.840947 | 6.396491e-58 | -8.615850e-47 |
| Msa0341520 | Msa1037030 | -0.825933 | 3.577338e-54 | -8.615850e-47 |
| Msa0540160 | Msa1037030 | -0.827063 | 1.924222e-54 | -8.615850e-47 |
| Msa0880050 | Msa1037030 | 0.812393 | 4.337549e-51 | -8.615850e-47 |
| Msa0930360 | Msa1037030 | 0.824980 | 6.016227e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037030 | MtrunA17_Chr7g0262051 | 93.856 | 472 | 8 | 3 | 1 | 471 | 1 | 452 | 0.0 | 883 |
| Msa1037030 | MtrunA17_Chr1g0168741 | 45.798 | 476 | 212 | 17 | 8 | 471 | 9 | 450 | 3.79e-114 | 344 |
| Msa1037030 | MtrunA17_Chr7g0219091 | 32.735 | 446 | 238 | 16 | 13 | 445 | 2 | 398 | 1.41e-45 | 165 |
| Msa1037030 | MtrunA17_Chr7g0235151 | 32.377 | 488 | 235 | 22 | 13 | 463 | 15 | 444 | 1.93e-45 | 166 |
| Msa1037030 | MtrunA17_Chr4g0061541 | 33.590 | 390 | 208 | 14 | 13 | 395 | 19 | 364 | 3.31e-39 | 145 |
| Msa1037030 | MtrunA17_Chr4g0043211 | 31.542 | 428 | 212 | 18 | 13 | 412 | 15 | 389 | 1.63e-36 | 140 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1037030 | AT5G43960.1 | 52.083 | 432 | 182 | 8 | 10 | 437 | 8 | 418 | 6.96e-121 | 361 |
| Msa1037030 | AT5G43960.2 | 50.815 | 368 | 168 | 7 | 74 | 437 | 1 | 359 | 4.32e-94 | 290 |
| Msa1037030 | AT3G25150.1 | 31.034 | 435 | 231 | 14 | 13 | 432 | 19 | 399 | 6.74e-49 | 175 |
| Msa1037030 | AT3G25150.2 | 31.881 | 436 | 228 | 15 | 12 | 432 | 117 | 498 | 2.41e-48 | 175 |
| Msa1037030 | AT5G60980.2 | 34.038 | 426 | 210 | 15 | 1 | 412 | 1 | 369 | 2.23e-47 | 170 |
| Msa1037030 | AT5G60980.3 | 34.038 | 426 | 210 | 15 | 1 | 412 | 1 | 369 | 2.23e-47 | 170 |
| Msa1037030 | AT5G60980.4 | 34.038 | 426 | 209 | 16 | 1 | 412 | 1 | 368 | 4.47e-46 | 166 |
| Msa1037030 | AT5G60980.1 | 34.038 | 426 | 209 | 16 | 1 | 412 | 1 | 368 | 4.47e-46 | 166 |
| Msa1037030 | AT5G48650.1 | 30.889 | 450 | 250 | 16 | 8 | 432 | 11 | 424 | 1.97e-41 | 154 |
| Msa1037030 | AT2G03640.2 | 27.742 | 465 | 252 | 14 | 13 | 464 | 15 | 408 | 1.35e-31 | 126 |
| Msa1037030 | AT1G13730.2 | 26.889 | 450 | 236 | 14 | 13 | 453 | 15 | 380 | 8.36e-31 | 124 |
| Msa1037030 | AT1G13730.1 | 26.889 | 450 | 236 | 14 | 13 | 453 | 15 | 380 | 8.36e-31 | 124 |
| Msa1037030 | AT2G03640.5 | 27.097 | 465 | 254 | 14 | 13 | 464 | 15 | 407 | 2.35e-30 | 122 |
| Msa1037030 | AT2G03640.1 | 27.097 | 465 | 254 | 14 | 13 | 464 | 15 | 407 | 2.35e-30 | 122 |
| Msa1037030 | AT2G03640.3 | 27.097 | 465 | 254 | 14 | 13 | 464 | 15 | 407 | 2.35e-30 | 122 |
| Msa1037030 | AT2G03640.4 | 27.160 | 405 | 225 | 10 | 13 | 412 | 15 | 354 | 8.87e-28 | 115 |
| Msa1037030 | AT1G69250.1 | 26.136 | 440 | 239 | 18 | 5 | 426 | 4 | 375 | 8.06e-24 | 103 |
Find 126 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAGAGTGAAACTGCGATTT+AGG | 0.247174 | 7_1:+73539747 | None:intergenic |
| AATGGGTGTTTACAGGAAAT+TGG | 0.247484 | 7_1:-73536974 | Msa1037030:intron |
| TGCAACTATGGCTTCGTATC+AGG | 0.247670 | 7_1:-73539653 | Msa1037030:exon |
| GCTTCTCCCATTCAACTTGC+TGG | 0.277795 | 7_1:-73535981 | Msa1037030:CDS |
| AGACAACGCTGCTTGGCCTT+TGG | 0.300125 | 7_1:+73537821 | None:intergenic |
| TGCCGAAATTCTTAAATTCC+TGG | 0.300457 | 7_1:+73537110 | None:intergenic |
| AGTTGCTGCTGCTGCTGTTC+AGG | 0.304754 | 7_1:+73538152 | None:intergenic |
| GACCAGGAATTTAAGAATTT+CGG | 0.312847 | 7_1:-73537112 | Msa1037030:CDS |
| TCTGCATATGTTTCAGAGTC+TGG | 0.329758 | 7_1:-73537669 | Msa1037030:CDS |
| TTTCTGGATCTGTGCAACTA+TGG | 0.339836 | 7_1:-73539665 | Msa1037030:exon |
| GCAGGTTGGTTCTTACTTTG+TGG | 0.349830 | 7_1:-73539509 | Msa1037030:intron |
| CTTCGCTCCTCTATGTATAT+TGG | 0.358616 | 7_1:+73535954 | None:intergenic |
| CGATCAATTCTCTGGACTCT+TGG | 0.361049 | 7_1:-73538799 | Msa1037030:CDS |
| CTTCCTTGCTCCTCAGGAGA+AGG | 0.362660 | 7_1:-73538696 | Msa1037030:CDS |
| CCTTCTGTGGTTTCATGAAA+AGG | 0.367778 | 7_1:-73535398 | Msa1037030:three_prime_UTR |
| CAGGTTGGTTCTTACTTTGT+GGG | 0.371768 | 7_1:-73539508 | Msa1037030:CDS |
| AACCTTCTTCCTTGCTCCTC+AGG | 0.377383 | 7_1:-73538702 | Msa1037030:CDS |
| TGGCACACAAAATGCGCTTC+AGG | 0.380260 | 7_1:-73536915 | Msa1037030:intron |
| TAAATTAATAGATAGTTGAT+TGG | 0.396393 | 7_1:-73538898 | Msa1037030:intron |
| GATGCTCCTAGAGGGCGTTT+TGG | 0.400201 | 7_1:-73535581 | Msa1037030:CDS |
| GACTCTTCCACAGGAGCAGC+GGG | 0.409545 | 7_1:+73538032 | None:intergenic |
| AGATGTAGTGCATCCGAATC+TGG | 0.418037 | 7_1:-73538636 | Msa1037030:CDS |
| GGAGTGATTGTAATGGTTAC+AGG | 0.426588 | 7_1:-73538770 | Msa1037030:CDS |
| TTAAGAACAAAGATGTCAAT+AGG | 0.426634 | 7_1:-73538742 | Msa1037030:CDS |
| GATCAATTCTCTGGACTCTT+GGG | 0.429277 | 7_1:-73538798 | Msa1037030:CDS |
| GGAGGAAGGGGAAGAGGCAG+AGG | 0.436801 | 7_1:-73535617 | Msa1037030:CDS |
| TAAAAGTGATAAACATGATC+AGG | 0.437939 | 7_1:+73539457 | None:intergenic |
| CATGCTTGAATATGTTATCA+AGG | 0.439419 | 7_1:-73535451 | Msa1037030:three_prime_UTR |
| AAATTAATAGATAGTTGATT+GGG | 0.444728 | 7_1:-73538897 | Msa1037030:intron |
| TGGTGGTCGTAGCTCGGGAA+GGG | 0.448174 | 7_1:-73535561 | Msa1037030:CDS |
| AGCCGGATGGAATATTCATA+AGG | 0.454672 | 7_1:-73537081 | Msa1037030:CDS |
| GATCAAGACGATCAATTCTC+TGG | 0.456876 | 7_1:-73538807 | Msa1037030:CDS |
| TAGCCTTCCTCAGCTGCCTC+AGG | 0.459871 | 7_1:+73537645 | None:intergenic |
| AACAAAATTCCCCACCTGAA+TGG | 0.461387 | 7_1:+73535271 | None:intergenic |
| ATAACCATCACCTCTTGGTC+TGG | 0.462287 | 7_1:+73535511 | None:intergenic |
| AATGAGAAAATGCGTTGAAA+GGG | 0.464001 | 7_1:-73535207 | Msa1037030:three_prime_UTR |
| GATGCCACCGGTACCAGATT+CGG | 0.472362 | 7_1:+73538623 | None:intergenic |
| GAGCTTGACTGCTGGAAAGC+AGG | 0.472708 | 7_1:+73537696 | None:intergenic |
| CTGCATATGTTTCAGAGTCT+GGG | 0.475914 | 7_1:-73537668 | Msa1037030:CDS |
| GTCTGGGCCTGAGGCAGCTG+AGG | 0.477221 | 7_1:-73537652 | Msa1037030:CDS |
| GGCGGAGATGCCTCCTGTAC+AGG | 0.478493 | 7_1:+73538089 | None:intergenic |
| TGGAGTTTGCTATGCATTTG+TGG | 0.480125 | 7_1:-73536954 | Msa1037030:CDS |
| TGATCAGGAGGAAGGGGAAG+AGG | 0.481081 | 7_1:-73535623 | Msa1037030:intron |
| GTGGAATTCGAAGACGTTGT+TGG | 0.482779 | 7_1:-73536935 | Msa1037030:CDS |
| GAGCAGCAGACAACGCTGCT+TGG | 0.485411 | 7_1:+73537814 | None:intergenic |
| CGAGTTGCACTGCTAGTGCT+TGG | 0.486128 | 7_1:+73535930 | None:intergenic |
| TTCCTTGCTCCTCAGGAGAA+GGG | 0.487353 | 7_1:-73538695 | Msa1037030:CDS |
| AGTTCGATGATTCGTGTTGA+CGG | 0.487457 | 7_1:-73539424 | Msa1037030:CDS |
| CTTCTCCCATTCAACTTGCT+GGG | 0.488153 | 7_1:-73535980 | Msa1037030:CDS |
| TAATGAGAAAATGCGTTGAA+AGG | 0.489889 | 7_1:-73535208 | Msa1037030:three_prime_UTR |
| TAATAGATAGTTGATTGGGT+TGG | 0.494937 | 7_1:-73538893 | Msa1037030:intron |
| ACCACTGACTGCTGAACAGC+AGG | 0.497270 | 7_1:+73537723 | None:intergenic |
| GGGTTCAGTTAGTGCTGCCC+AGG | 0.498131 | 7_1:-73539632 | Msa1037030:intron |
| AACAAACTAGCAAGTCTCAA+TGG | 0.498761 | 7_1:+73535340 | None:intergenic |
| GGGCCTGAGGCAGCTGAGGA+AGG | 0.499029 | 7_1:-73537648 | Msa1037030:CDS |
| CAGATGCTGAGCTTGACTGC+TGG | 0.499052 | 7_1:+73537688 | None:intergenic |
| CTCGGGAAGGGGATATTACC+AGG | 0.503423 | 7_1:-73535549 | Msa1037030:CDS |
| ACCCTTATGAATATTCCATC+CGG | 0.504885 | 7_1:+73537079 | None:intergenic |
| GAATCAAACCTTCTTCAAAT+CGG | 0.506768 | 7_1:+73537622 | None:intergenic |
| GGTGGTCGTAGCTCGGGAAG+GGG | 0.507014 | 7_1:-73535560 | Msa1037030:CDS |
| TGAAGATAACCATCACCTCT+TGG | 0.508776 | 7_1:+73535506 | None:intergenic |
| GTCTCTTGATCAGGAGGAAG+GGG | 0.509603 | 7_1:-73535629 | Msa1037030:intron |
| GAAGGCTACCGATTTGAAGA+AGG | 0.513680 | 7_1:-73537630 | Msa1037030:intron |
| TGGTCGCCCAGCAAGTTGAA+TGG | 0.515334 | 7_1:+73535974 | None:intergenic |
| CTCCTGAGGAGCAAGGAAGA+AGG | 0.516939 | 7_1:+73538700 | None:intergenic |
| GCAACTATGGCTTCGTATCA+GGG | 0.517260 | 7_1:-73539652 | Msa1037030:exon |
| GAATTTCGGCAGAATTAAGC+CGG | 0.519034 | 7_1:-73537098 | Msa1037030:CDS |
| TTGGTGGTCGTAGCTCGGGA+AGG | 0.520627 | 7_1:-73535562 | Msa1037030:CDS |
| GGTCGCCCAGCAAGTTGAAT+GGG | 0.520774 | 7_1:+73535975 | None:intergenic |
| GCCGGATGGAATATTCATAA+GGG | 0.523010 | 7_1:-73537080 | Msa1037030:CDS |
| CGACCACCAAAACGCCCTCT+AGG | 0.524390 | 7_1:+73535575 | None:intergenic |
| TGGAGTAGTCTGAAGTATCC+TGG | 0.526372 | 7_1:+73535531 | None:intergenic |
| CGCCCTCTAGGAGCATCTGT+TGG | 0.526766 | 7_1:+73535587 | None:intergenic |
| GGTAGATGAAACTCCTGTAC+AGG | 0.542907 | 7_1:-73538102 | Msa1037030:CDS |
| CTCTTCCACAGGAGCAGCGG+GGG | 0.542970 | 7_1:+73538034 | None:intergenic |
| TGAGACTGCATCTGATGTCT+TGG | 0.544441 | 7_1:-73539392 | Msa1037030:intron |
| ATGCTTGAATATGTTATCAA+GGG | 0.544462 | 7_1:-73535450 | Msa1037030:three_prime_UTR |
| ACGTCTCTTGATCAGGAGGA+AGG | 0.549916 | 7_1:-73535631 | Msa1037030:intron |
| ATTGGCCTCATGTCGGATTG+TGG | 0.550171 | 7_1:-73535242 | Msa1037030:three_prime_UTR |
| CGTCTCTTGATCAGGAGGAA+GGG | 0.552237 | 7_1:-73535630 | Msa1037030:intron |
| TTCGGCAGAATTAAGCCGGA+TGG | 0.553328 | 7_1:-73537094 | Msa1037030:CDS |
| TCTTCAGCGTGGTTCACGAT+AGG | 0.554535 | 7_1:-73535489 | Msa1037030:exon |
| TCCTCAAAAGACTCTTCCAC+AGG | 0.555708 | 7_1:+73538023 | None:intergenic |
| TCAGCTTCAGTAATATCAGC+AGG | 0.556106 | 7_1:+73537139 | None:intergenic |
| TCTCTGGACTCTTGGGATGG+AGG | 0.559179 | 7_1:-73538791 | Msa1037030:CDS |
| AATATTCATAAGGGTCCGAC+AGG | 0.561099 | 7_1:-73537071 | Msa1037030:intron |
| GGATGGAGGAGTGATTGTAA+TGG | 0.568146 | 7_1:-73538777 | Msa1037030:CDS |
| GCCTGCTGTTCAGCAGTCAG+TGG | 0.570838 | 7_1:-73537724 | Msa1037030:CDS |
| TATTTATATTGGCCTCATGT+CGG | 0.574224 | 7_1:-73535249 | Msa1037030:three_prime_UTR |
| GGAAGACTATACTTGTCCAC+TGG | 0.574359 | 7_1:+73538173 | None:intergenic |
| AATTCTCTGGACTCTTGGGA+TGG | 0.583195 | 7_1:-73538794 | Msa1037030:CDS |
| AACCCTTCTCCTGAGGAGCA+AGG | 0.583492 | 7_1:+73538693 | None:intergenic |
| AGATTTCGAGACCGAAGTTG+TGG | 0.585187 | 7_1:-73538123 | Msa1037030:CDS |
| TACTCCAGACCAAGAGGTGA+TGG | 0.589299 | 7_1:-73535515 | Msa1037030:CDS |
| GTATGTGCAACATTATGCAC+TGG | 0.591139 | 7_1:+73538068 | None:intergenic |
| AGTGCATCCGAATCTGGTAC+CGG | 0.594604 | 7_1:-73538630 | Msa1037030:CDS |
| TTTATGATGCCATTCAGGTG+GGG | 0.595225 | 7_1:-73535280 | Msa1037030:three_prime_UTR |
| GAATGTTGTGGAGCATGTTG+TGG | 0.597301 | 7_1:+73537792 | None:intergenic |
| TGTTTCAGAGTCTGGGCCTG+AGG | 0.597896 | 7_1:-73537661 | Msa1037030:CDS |
| AATTTGTAGTTACGCGCCAA+AGG | 0.598248 | 7_1:-73537837 | Msa1037030:intron |
| AGACTCTTCCACAGGAGCAG+CGG | 0.601787 | 7_1:+73538031 | None:intergenic |
| AGTTTCATCTACCACAACTT+CGG | 0.605716 | 7_1:+73538112 | None:intergenic |
| TAGGTTTAGATATGAGAATG+CGG | 0.606309 | 7_1:+73539766 | None:intergenic |
| TGGTACCGGTGGCATCTGAA+AGG | 0.607544 | 7_1:-73538616 | Msa1037030:CDS |
| ATCCAACAGATGCTCCTAGA+GGG | 0.613913 | 7_1:-73535589 | Msa1037030:CDS |
| TTGCACAGATCCAGAAACAA+AGG | 0.618200 | 7_1:+73539671 | None:intergenic |
| AGCATCCACAATCCGACATG+AGG | 0.620556 | 7_1:+73535237 | None:intergenic |
| ACAAAATAACCCTTCTCCTG+AGG | 0.621374 | 7_1:+73538686 | None:intergenic |
| TACTGAAGCTGAGATTGACC+AGG | 0.624100 | 7_1:-73537128 | Msa1037030:CDS |
| ACTAGCAGTGCAACTCGAGG+AGG | 0.626229 | 7_1:-73535924 | Msa1037030:CDS |
| TCAATCCTTTCAGATGCCAC+CGG | 0.628826 | 7_1:+73538611 | None:intergenic |
| GTCACATGATTGTACTCTGA+AGG | 0.635660 | 7_1:+73537750 | None:intergenic |
| TGATTGTACTCTGAAGGAGG+AGG | 0.640380 | 7_1:+73537756 | None:intergenic |
| TCAGACTACTCCAGACCAAG+AGG | 0.641067 | 7_1:-73535521 | Msa1037030:CDS |
| GCAAAAGAAGCAGAAACATG+TGG | 0.644848 | 7_1:+73538581 | None:intergenic |
| TCATATAGATGATGATCCAG+TGG | 0.650234 | 7_1:-73538189 | Msa1037030:CDS |
| AGATGAAACTCCTGTACAGG+AGG | 0.655569 | 7_1:-73538099 | Msa1037030:CDS |
| ACATGATTGTACTCTGAAGG+AGG | 0.658893 | 7_1:+73537753 | None:intergenic |
| GCATCCGAATCTGGTACCGG+TGG | 0.659905 | 7_1:-73538627 | Msa1037030:CDS |
| TGGGCGACCAATATACATAG+AGG | 0.672867 | 7_1:-73535961 | Msa1037030:CDS |
| AGCACTAGCAGTGCAACTCG+AGG | 0.683770 | 7_1:-73535927 | Msa1037030:CDS |
| TATCCAACAGATGCTCCTAG+AGG | 0.683891 | 7_1:-73535590 | Msa1037030:CDS |
| ATCAAAATAAGTCTCAACAA+CGG | 0.686667 | 7_1:+73535118 | None:intergenic |
| TGTGCAACATTATGCACTGG+CGG | 0.693019 | 7_1:+73538071 | None:intergenic |
| ACTCTTCCACAGGAGCAGCG+GGG | 0.716262 | 7_1:+73538033 | None:intergenic |
| GGTGATGGTTATCTTCAGCG+TGG | 0.721846 | 7_1:-73535500 | Msa1037030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATATATAAATATTTTGTGA+GGG | + | chr7_1:73535094-73535113 | None:intergenic | 10.0% |
| !!! | TTATATATAAATATTTTGTG+AGG | + | chr7_1:73535095-73535114 | None:intergenic | 10.0% |
| !!! | ATTTTTTTTCAATTGTTTTA+GGG | - | chr7_1:73535632-73535651 | Msa1037030:intron | 10.0% |
| !! | TTATATAAACTAAAACAAAA+AGG | + | chr7_1:73537043-73537062 | None:intergenic | 10.0% |
| !! | TAGATAATAAAACATTTATT+AGG | + | chr7_1:73538121-73538140 | None:intergenic | 10.0% |
| !!! | ATATATAAATATTTTGTGAG+GGG | + | chr7_1:73535093-73535112 | None:intergenic | 15.0% |
| !! | AAAGAAATAAATAAAAACCT+GGG | + | chr7_1:73535359-73535378 | None:intergenic | 15.0% |
| !! | TAAAGAAATAAATAAAAACC+TGG | + | chr7_1:73535360-73535379 | None:intergenic | 15.0% |
| !!! | CATTTTTTTTCAATTGTTTT+AGG | - | chr7_1:73535631-73535650 | Msa1037030:intron | 15.0% |
| !! | TAAATTAATAGATAGTTGAT+TGG | - | chr7_1:73536073-73536092 | Msa1037030:intron | 15.0% |
| !! | AAATTAATAGATAGTTGATT+GGG | - | chr7_1:73536074-73536093 | Msa1037030:intron | 15.0% |
| !!! | TCTTAGTATGAATTTTTTAT+TGG | - | chr7_1:73537376-73537395 | Msa1037030:intron | 15.0% |
| !! | GATGATTATATAGTTAATTA+TGG | - | chr7_1:73537951-73537970 | Msa1037030:intron | 15.0% |
| !!! | TTTTATGATTATTAAAGGTA+TGG | + | chr7_1:73538150-73538169 | None:intergenic | 15.0% |
| !!! | GTATGTTTTATGATTATTAA+AGG | + | chr7_1:73538155-73538174 | None:intergenic | 15.0% |
| !! | AAAGAAAATGTATATAAACA+AGG | + | chr7_1:73538733-73538752 | None:intergenic | 15.0% |
| !!! | TTTATATACATTTTCTTTGA+AGG | - | chr7_1:73538735-73538754 | Msa1037030:CDS | 15.0% |
| !! | AAAACCCTAAATAGAATTTA+GGG | - | chr7_1:73535262-73535281 | Msa1037030:three_prime_UTR | 20.0% |
| !! | AAAACCCTAAATTCTATTTA+GGG | + | chr7_1:73535269-73535288 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTATGTGGATTCT+TGG | - | chr7_1:73535397-73535416 | Msa1037030:three_prime_UTR | 20.0% |
| !! | GTTATATAAAATCCGTAAAT+CGG | + | chr7_1:73535862-73535881 | None:intergenic | 20.0% |
| !! | AAAAGTAGCATTTACTAAAA+AGG | + | chr7_1:73536567-73536586 | None:intergenic | 20.0% |
| !!! | TACTTAAATTGATGATTTGT+GGG | - | chr7_1:73537424-73537443 | Msa1037030:intron | 20.0% |
| !!! | GCATAAACTTTTTATTCTAA+AGG | - | chr7_1:73537588-73537607 | Msa1037030:intron | 20.0% |
| !! | TGAAATGCATTATGTAAATT+TGG | - | chr7_1:73537706-73537725 | Msa1037030:CDS | 20.0% |
| !!! | AAATGTCCATAATCAATTTT+TGG | - | chr7_1:73538215-73538234 | Msa1037030:CDS | 20.0% |
| !! | ATAAATCAAATGAAAGATGA+AGG | + | chr7_1:73538626-73538645 | None:intergenic | 20.0% |
| !! | ATATTGAAATATGTGAATGT+AGG | - | chr7_1:73538782-73538801 | Msa1037030:CDS | 20.0% |
| !!! | CTTGTACTTTTTTTTTTTGA+AGG | - | chr7_1:73538868-73538887 | Msa1037030:CDS | 20.0% |
| !!! | AAAATGATCTGAAATGAATA+TGG | + | chr7_1:73538929-73538948 | None:intergenic | 20.0% |
| !!! | GACAATCAATTTTTAATATC+AGG | + | chr7_1:73539133-73539152 | None:intergenic | 20.0% |
| !! | AATAGTTTCAATTACTTCAA+GGG | + | chr7_1:73539194-73539213 | None:intergenic | 20.0% |
| !! | AAATAGTTTCAATTACTTCA+AGG | + | chr7_1:73539195-73539214 | None:intergenic | 20.0% |
| !! | TTGAAGTAATTGAAACTATT+TGG | - | chr7_1:73539194-73539213 | Msa1037030:intron | 20.0% |
| !!! | TGAAAAGGATTTTTACATTT+TGG | - | chr7_1:73539588-73539607 | Msa1037030:intron | 20.0% |
| !!! | GAAAAGGATTTTTACATTTT+GGG | - | chr7_1:73539589-73539608 | Msa1037030:intron | 20.0% |
| !! | CATCATAAAAATCATTCAAA+GGG | + | chr7_1:73539680-73539699 | None:intergenic | 20.0% |
| !!! | GGGAATTTTGTTATTTATAT+TGG | - | chr7_1:73539711-73539730 | Msa1037030:intron | 20.0% |
| ! | GAAAACCCTAAATAGAATTT+AGG | - | chr7_1:73535261-73535280 | Msa1037030:three_prime_UTR | 25.0% |
| ! | GAAAACCCTAAATTCTATTT+AGG | + | chr7_1:73535270-73535289 | None:intergenic | 25.0% |
| !!! | AGAATTTAGGGTTTTCTTTT+CGG | - | chr7_1:73535274-73535293 | Msa1037030:three_prime_UTR | 25.0% |
| ! | TAAAAGTGATAAACATGATC+AGG | + | chr7_1:73535517-73535536 | None:intergenic | 25.0% |
| ! | GATGGTATAGAATAAATTGA+CGG | - | chr7_1:73535951-73535970 | Msa1037030:CDS | 25.0% |
| !! | ATTTATTCTTTTTAACCACG+AGG | - | chr7_1:73535983-73536002 | Msa1037030:CDS | 25.0% |
| !! | TTTATTCTTTTTAACCACGA+GGG | - | chr7_1:73535984-73536003 | Msa1037030:CDS | 25.0% |
| ! | TTAAGAACAAAGATGTCAAT+AGG | - | chr7_1:73536229-73536248 | Msa1037030:intron | 25.0% |
| ! | TTCTACAATCAAATTATACC+AGG | + | chr7_1:73536423-73536442 | None:intergenic | 25.0% |
| !!! | GATTGTAGAATCATGTTTTT+TGG | - | chr7_1:73536433-73536452 | Msa1037030:intron | 25.0% |
| !! | GTACTTAAATTGATGATTTG+TGG | - | chr7_1:73537423-73537442 | Msa1037030:intron | 25.0% |
| !! | ACTTAAATTGATGATTTGTG+GGG | - | chr7_1:73537425-73537444 | Msa1037030:intron | 25.0% |
| !! | TTTTGAACGATTGTCATATA+CGG | - | chr7_1:73537529-73537548 | Msa1037030:intron | 25.0% |
| ! | AATGAAACTTTAGTATTCTC+TGG | - | chr7_1:73537619-73537638 | Msa1037030:intron | 25.0% |
| ! | TTAGTATTCTCTGGTAAAAT+TGG | - | chr7_1:73537628-73537647 | Msa1037030:intron | 25.0% |
| ! | ACAGTATTCTATGGTAAAAT+TGG | - | chr7_1:73537674-73537693 | Msa1037030:CDS | 25.0% |
| !! | AGCACAATCTAAAATAGAAA+TGG | - | chr7_1:73537979-73537998 | Msa1037030:intron | 25.0% |
| !! | GCACAATCTAAAATAGAAAT+GGG | - | chr7_1:73537980-73537999 | Msa1037030:intron | 25.0% |
| ! | ATTTGGCCAAAAATTGATTA+TGG | + | chr7_1:73538224-73538243 | None:intergenic | 25.0% |
| ! | AAAACAAACTCGAAACTTAA+AGG | + | chr7_1:73538290-73538309 | None:intergenic | 25.0% |
| !!! | TTTAAGTTTCGAGTTTGTTT+TGG | - | chr7_1:73538289-73538308 | Msa1037030:intron | 25.0% |
| !!! | CCAAAGTTGATTTGATAAAA+GGG | + | chr7_1:73538381-73538400 | None:intergenic | 25.0% |
| !! | ATAGATCCTTTAAGTTTCTA+AGG | + | chr7_1:73538470-73538489 | None:intergenic | 25.0% |
| !! | TCTAAGTTTGAAGTTTGTTT+CGG | + | chr7_1:73538493-73538512 | None:intergenic | 25.0% |
| !! | ATAGATCCTTTAAGTTTCTA+AGG | + | chr7_1:73538470-73538489 | None:intergenic | 25.0% |
| ! | GAAACAAACATGAAACTTAA+AGG | - | chr7_1:73538552-73538571 | Msa1037030:intron | 25.0% |
| !! | TTTAAGGCATAGAAAAATTG+AGG | + | chr7_1:73538596-73538615 | None:intergenic | 25.0% |
| ! | ATATGGATATCAGGTTAAAT+TGG | - | chr7_1:73538666-73538685 | Msa1037030:CDS | 25.0% |
| !!! | TATACATTTTCTTTGAAGGA+TGG | - | chr7_1:73538739-73538758 | Msa1037030:CDS | 25.0% |
| ! | TGTACTTATGATGCAATAAT+TGG | - | chr7_1:73538898-73538917 | Msa1037030:intron | 25.0% |
| ! | AAATCTATGCATGTTATTGT+AGG | - | chr7_1:73538968-73538987 | Msa1037030:intron | 25.0% |
| !! | CTTTTGACAGTAATAAATTG+AGG | + | chr7_1:73539096-73539115 | None:intergenic | 25.0% |
| !! | ATTGTTTCTTCTATTGCTTA+AGG | - | chr7_1:73539154-73539173 | Msa1037030:intron | 25.0% |
| ! | TATCACTTTCTGATGAAATA+TGG | - | chr7_1:73539284-73539303 | Msa1037030:intron | 25.0% |
| ! | ATGCTTGAATATGTTATCAA+GGG | - | chr7_1:73539521-73539540 | Msa1037030:intron | 25.0% |
| ! | GCATCATAAAAATCATTCAA+AGG | + | chr7_1:73539681-73539700 | None:intergenic | 25.0% |
| ! | ATCAAAATAAGTCTCAACAA+CGG | + | chr7_1:73539856-73539875 | None:intergenic | 25.0% |
| ! | AAATATTTTGTGAGGGGTTT+AGG | + | chr7_1:73535087-73535106 | None:intergenic | 30.0% |
| TAGGTTTAGATATGAGAATG+CGG | + | chr7_1:73535208-73535227 | None:intergenic | 30.0% | |
| TTGGATTTGTGTGAATTGAT+AGG | - | chr7_1:73535416-73535435 | Msa1037030:three_prime_UTR | 30.0% | |
| TGGATTTGTGTGAATTGATA+GGG | - | chr7_1:73535417-73535436 | Msa1037030:three_prime_UTR | 30.0% | |
| !! | TGTTTGTTTGATTGATTTGC+AGG | - | chr7_1:73535444-73535463 | Msa1037030:three_prime_UTR | 30.0% |
| ATATACCAAGACTGAATTGT+CGG | + | chr7_1:73535790-73535809 | None:intergenic | 30.0% | |
| ! | TGACTAAATTGACCGATTTA+CGG | - | chr7_1:73535847-73535866 | Msa1037030:intron | 30.0% |
| ! | TTTATTCTTTTCAACCACGA+GGG | - | chr7_1:73535889-73535908 | Msa1037030:intron | 30.0% |
| AATTTAGTCTAGCATCTAGA+TGG | - | chr7_1:73535933-73535952 | Msa1037030:CDS | 30.0% | |
| TAATAGATAGTTGATTGGGT+TGG | - | chr7_1:73536078-73536097 | Msa1037030:intron | 30.0% | |
| TACAATCAAATTATACCAGG+TGG | + | chr7_1:73536420-73536439 | None:intergenic | 30.0% | |
| ACACCTAGTAAGATGATTAA+TGG | - | chr7_1:73536519-73536538 | Msa1037030:intron | 30.0% | |
| AGACCATTAATCATCTTACT+AGG | + | chr7_1:73536525-73536544 | None:intergenic | 30.0% | |
| !!! | AATGCTACTTTTAACAAGTC+TGG | - | chr7_1:73536575-73536594 | Msa1037030:intron | 30.0% |
| !!! | ATGCTACTTTTAACAAGTCT+GGG | - | chr7_1:73536576-73536595 | Msa1037030:intron | 30.0% |
| ! | TTTTTATCAGCTTCAGACTA+TGG | - | chr7_1:73536723-73536742 | Msa1037030:intron | 30.0% |
| GAATCAAACCTTCTTCAAAT+CGG | + | chr7_1:73537352-73537371 | None:intergenic | 30.0% | |
| GACCAGGAATTTAAGAATTT+CGG | - | chr7_1:73537859-73537878 | Msa1037030:intron | 30.0% | |
| AAATAGAAATGGGTGTTTAC+AGG | - | chr7_1:73537990-73538009 | Msa1037030:intron | 30.0% | |
| GAAACAAACGTGAAACTAAA+AGG | + | chr7_1:73538259-73538278 | None:intergenic | 30.0% | |
| ! | ATAGGTCCTTTAAGTTTCTA+AGG | - | chr7_1:73538312-73538331 | Msa1037030:intron | 30.0% |
| CTGAAACCTTAGAAACTTAA+AGG | + | chr7_1:73538461-73538480 | None:intergenic | 30.0% | |
| !! | AAGTTTCTAAGGTTTCAGAT+AGG | - | chr7_1:73538323-73538342 | Msa1037030:intron | 30.0% |
| GAAACAAACTCGAAACTTAA+AGG | + | chr7_1:73538432-73538451 | None:intergenic | 30.0% | |
| ! | CCCTTTTATCAAATCAACTT+TGG | - | chr7_1:73538378-73538397 | Msa1037030:intron | 30.0% |
| !! | GCCAAAGTTGATTTGATAAA+AGG | + | chr7_1:73538382-73538401 | None:intergenic | 30.0% |
| ! | TCAAATCAACTTTGGCTTAA+CGG | - | chr7_1:73538386-73538405 | Msa1037030:intron | 30.0% |
| GAAACAAACTCGAAACTTAA+AGG | - | chr7_1:73538432-73538451 | Msa1037030:intron | 30.0% | |
| !! | AAGTTTCTAAGGTTTCAGAT+AGG | + | chr7_1:73538323-73538342 | None:intergenic | 30.0% |
| CTGAAACCTTAGAAACTTAA+AGG | - | chr7_1:73538461-73538480 | Msa1037030:intron | 30.0% | |
| GAAACAAACTTCAAACTTAG+AGG | - | chr7_1:73538492-73538511 | Msa1037030:intron | 30.0% | |
| CTGAAACCTTAGAAACTTAA+AGG | - | chr7_1:73538461-73538480 | Msa1037030:intron | 30.0% | |
| !! | AGATGAAGGTTCTGATTTTA+AGG | + | chr7_1:73538612-73538631 | None:intergenic | 30.0% |
| ! | CATCATCAGATGTTTTCATA+TGG | - | chr7_1:73538649-73538668 | Msa1037030:CDS | 30.0% |
| ! | GATGTTTTCATATGGATATC+AGG | - | chr7_1:73538657-73538676 | Msa1037030:CDS | 30.0% |
| ! | TTCTTTGAAGGATGGTTAAT+TGG | - | chr7_1:73538747-73538766 | Msa1037030:CDS | 30.0% |
| ! | TCTTTGAAGGATGGTTAATT+GGG | - | chr7_1:73538748-73538767 | Msa1037030:CDS | 30.0% |
| ACACTCAAACATCTAAAGAA+AGG | + | chr7_1:73539257-73539276 | None:intergenic | 30.0% | |
| CATGCTTGAATATGTTATCA+AGG | - | chr7_1:73539520-73539539 | Msa1037030:intron | 30.0% | |
| ! | TGATTTTTATGATGCCATTC+AGG | - | chr7_1:73539686-73539705 | Msa1037030:five_prime_UTR | 30.0% |
| ! | TATTTATATTGGCCTCATGT+CGG | - | chr7_1:73539722-73539741 | Msa1037030:intron | 30.0% |
| TAATGAGAAAATGCGTTGAA+AGG | - | chr7_1:73539763-73539782 | Msa1037030:five_prime_UTR | 30.0% | |
| AATGAGAAAATGCGTTGAAA+GGG | - | chr7_1:73539764-73539783 | Msa1037030:five_prime_UTR | 30.0% | |
| AAAGAGTGAAACTGCGATTT+AGG | + | chr7_1:73535227-73535246 | None:intergenic | 35.0% | |
| !! | TTTTCGGTTACCTTTGTTTC+TGG | - | chr7_1:73535290-73535309 | Msa1037030:three_prime_UTR | 35.0% |
| !! | TGTTTGATTGATTTGCAGGT+TGG | - | chr7_1:73535448-73535467 | Msa1037030:three_prime_UTR | 35.0% |
| !!! | TCATTTTAGTTCTAGCCTCT+TGG | - | chr7_1:73535713-73535732 | Msa1037030:intron | 35.0% |
| !! | AGCCTCTTGGTGATTTTAAT+CGG | - | chr7_1:73535726-73535745 | Msa1037030:intron | 35.0% |
| TTCCGATTAAAATCACCAAG+AGG | + | chr7_1:73535731-73535750 | None:intergenic | 35.0% | |
| AAAATCCGACAATTCAGTCT+TGG | - | chr7_1:73535782-73535801 | Msa1037030:intron | 35.0% | |
| ! | GTTTATTCTTTTCAACCACG+AGG | - | chr7_1:73535888-73535907 | Msa1037030:intron | 35.0% |
| TTTCATCAAAAATACCCTCG+TGG | + | chr7_1:73535906-73535925 | None:intergenic | 35.0% | |
| TCATATAGATGATGATCCAG+TGG | - | chr7_1:73536782-73536801 | Msa1037030:intron | 35.0% | |
| AGTTTCATCTACCACAACTT+CGG | + | chr7_1:73536862-73536881 | None:intergenic | 35.0% | |
| ! | GATGCATAAGTTTTCTTAGC+AGG | + | chr7_1:73536975-73536994 | None:intergenic | 35.0% |
| !! | GCACTTTTAAAGGAATGTTG+TGG | + | chr7_1:73537194-73537213 | None:intergenic | 35.0% |
| ACCATAGAATACTGTTTCCA+GGG | + | chr7_1:73537669-73537688 | None:intergenic | 35.0% | |
| TACCATAGAATACTGTTTCC+AGG | + | chr7_1:73537670-73537689 | None:intergenic | 35.0% | |
| ! | TTCTGGAAGAATTATAGACC+GGG | + | chr7_1:73537782-73537801 | None:intergenic | 35.0% |
| ! | CTTCTGGAAGAATTATAGAC+CGG | + | chr7_1:73537783-73537802 | None:intergenic | 35.0% |
| ! | TAGACAGATGTTACTTCTTC+TGG | + | chr7_1:73537799-73537818 | None:intergenic | 35.0% |
| TGCCGAAATTCTTAAATTCC+TGG | + | chr7_1:73537864-73537883 | None:intergenic | 35.0% | |
| ACCCTTATGAATATTCCATC+CGG | + | chr7_1:73537895-73537914 | None:intergenic | 35.0% | |
| !! | GTTCAGTTTTATGTAGTGAG+AGG | + | chr7_1:73537931-73537950 | None:intergenic | 35.0% |
| AATGGGTGTTTACAGGAAAT+TGG | - | chr7_1:73537997-73538016 | Msa1037030:CDS | 35.0% | |
| GTTTCACGTTTGTTTCAGAT+AGG | - | chr7_1:73538263-73538282 | Msa1037030:intron | 35.0% | |
| !!! | GTTTCGAGTTTGTTTTGGAT+AGG | - | chr7_1:73538294-73538313 | Msa1037030:intron | 35.0% |
| !! | GTTTCGAGTTTGTTTCAGAT+AGG | - | chr7_1:73538354-73538373 | Msa1037030:intron | 35.0% |
| !! | GTTTCGAGTTTGTTTCAGAT+AGG | + | chr7_1:73538354-73538373 | None:intergenic | 35.0% |
| AACATGAAACTTAAAGGACC+CGG | - | chr7_1:73538558-73538577 | Msa1037030:intron | 35.0% | |
| AGTTTCAATTACTTCAAGGG+AGG | + | chr7_1:73539191-73539210 | None:intergenic | 35.0% | |
| ATTTCTTACGTCTCTTGATC+AGG | - | chr7_1:73539333-73539352 | Msa1037030:intron | 35.0% | |
| AACAAACTAGCAAGTCTCAA+TGG | + | chr7_1:73539634-73539653 | None:intergenic | 35.0% | |
| ! | TTTTTATGATGCCATTCAGG+TGG | - | chr7_1:73539689-73539708 | Msa1037030:five_prime_UTR | 35.0% |
| ! | TTTTATGATGCCATTCAGGT+GGG | - | chr7_1:73539690-73539709 | Msa1037030:five_prime_UTR | 35.0% |
| AATGCGTTGAAAGGGAAAAA+AGG | - | chr7_1:73539772-73539791 | Msa1037030:five_prime_UTR | 35.0% | |
| !!! | GACTTATTTTGATAGTGTCG+TGG | - | chr7_1:73539863-73539882 | Msa1037030:five_prime_UTR | 35.0% |
| TTGCACAGATCCAGAAACAA+AGG | + | chr7_1:73535303-73535322 | None:intergenic | 40.0% | |
| TTTCTGGATCTGTGCAACTA+TGG | - | chr7_1:73535306-73535325 | Msa1037030:three_prime_UTR | 40.0% | |
| !! | CAGGTTGGTTCTTACTTTGT+GGG | - | chr7_1:73535463-73535482 | Msa1037030:three_prime_UTR | 40.0% |
| AGTTCGATGATTCGTGTTGA+CGG | - | chr7_1:73535547-73535566 | Msa1037030:CDS | 40.0% | |
| !!! | AACCACGAGGGTATTTTTGA+AGG | - | chr7_1:73535901-73535920 | Msa1037030:intron | 40.0% |
| !!! | ACCACGAGGGTATTTTTGAA+GGG | - | chr7_1:73535997-73536016 | Msa1037030:intron | 40.0% |
| GATCAAGACGATCAATTCTC+TGG | - | chr7_1:73536164-73536183 | Msa1037030:intron | 40.0% | |
| GATCAATTCTCTGGACTCTT+GGG | - | chr7_1:73536173-73536192 | Msa1037030:intron | 40.0% | |
| GGAGTGATTGTAATGGTTAC+AGG | - | chr7_1:73536201-73536220 | Msa1037030:intron | 40.0% | |
| ACAAAATAACCCTTCTCCTG+AGG | + | chr7_1:73536288-73536307 | None:intergenic | 40.0% | |
| GCAAAAGAAGCAGAAACATG+TGG | + | chr7_1:73536393-73536412 | None:intergenic | 40.0% | |
| !! | AGCTTCAGACTATGGTTTTG+AGG | - | chr7_1:73536731-73536750 | Msa1037030:intron | 40.0% |
| GTATGTGCAACATTATGCAC+TGG | + | chr7_1:73536906-73536925 | None:intergenic | 40.0% | |
| AATTTGTAGTTACGCGCCAA+AGG | - | chr7_1:73537134-73537153 | Msa1037030:CDS | 40.0% | |
| ! | ACATGATTGTACTCTGAAGG+AGG | + | chr7_1:73537221-73537240 | None:intergenic | 40.0% |
| GTCACATGATTGTACTCTGA+AGG | + | chr7_1:73537224-73537243 | None:intergenic | 40.0% | |
| TCTGCATATGTTTCAGAGTC+TGG | - | chr7_1:73537302-73537321 | Msa1037030:intron | 40.0% | |
| CTGCATATGTTTCAGAGTCT+GGG | - | chr7_1:73537303-73537322 | Msa1037030:intron | 40.0% | |
| CAGTCAAAAAACACGCGTAA+CGG | + | chr7_1:73537474-73537493 | None:intergenic | 40.0% | |
| ! | ATTGTTACTCGAAGTGCTAG+TGG | - | chr7_1:73537499-73537518 | Msa1037030:intron | 40.0% |
| ATAGAATACTGTTTCCAGGG+TGG | + | chr7_1:73537666-73537685 | None:intergenic | 40.0% | |
| ACCCTGGAAACAGTATTCTA+TGG | - | chr7_1:73537665-73537684 | Msa1037030:CDS | 40.0% | |
| TGTGTCATCAAGTTAACACC+CGG | - | chr7_1:73537761-73537780 | Msa1037030:CDS | 40.0% | |
| TCAGCTTCAGTAATATCAGC+AGG | + | chr7_1:73537835-73537854 | None:intergenic | 40.0% | |
| GAATTTCGGCAGAATTAAGC+CGG | - | chr7_1:73537873-73537892 | Msa1037030:intron | 40.0% | |
| AGCCGGATGGAATATTCATA+AGG | - | chr7_1:73537890-73537909 | Msa1037030:intron | 40.0% | |
| GCCGGATGGAATATTCATAA+GGG | - | chr7_1:73537891-73537910 | Msa1037030:intron | 40.0% | |
| AATATTCATAAGGGTCCGAC+AGG | - | chr7_1:73537900-73537919 | Msa1037030:intron | 40.0% | |
| !! | TGGAGTTTGCTATGCATTTG+TGG | - | chr7_1:73538017-73538036 | Msa1037030:CDS | 40.0% |
| CATACTGAAGATACCAGATG+TGG | - | chr7_1:73538170-73538189 | Msa1037030:CDS | 40.0% | |
| TAAACAAGTCGATCCACATC+TGG | + | chr7_1:73538186-73538205 | None:intergenic | 40.0% | |
| ! | AATCAACTTTGGCTTAACGG+AGG | - | chr7_1:73538389-73538408 | Msa1037030:intron | 40.0% |
| !! | CTTAACGGAGGTTGATAGAA+AGG | - | chr7_1:73538401-73538420 | Msa1037030:intron | 40.0% |
| ACATGAAACTTAAAGGACCC+GGG | - | chr7_1:73538559-73538578 | Msa1037030:intron | 40.0% | |
| CTTCGCTCCTCTATGTATAT+TGG | + | chr7_1:73539020-73539039 | None:intergenic | 40.0% | |
| TGAAGATAACCATCACCTCT+TGG | + | chr7_1:73539468-73539487 | None:intergenic | 40.0% | |
| ! | TGCACAACATTTTCCTTCTG+TGG | - | chr7_1:73539560-73539579 | Msa1037030:intron | 40.0% |
| ! | CCTTTTCATGAAACCACAGA+AGG | + | chr7_1:73539576-73539595 | None:intergenic | 40.0% |
| CCTTCTGTGGTTTCATGAAA+AGG | - | chr7_1:73539573-73539592 | Msa1037030:intron | 40.0% | |
| TTTATGATGCCATTCAGGTG+GGG | - | chr7_1:73539691-73539710 | Msa1037030:intron | 40.0% | |
| AACAAAATTCCCCACCTGAA+TGG | + | chr7_1:73539703-73539722 | None:intergenic | 40.0% | |
| AAGGGAAAAAAGGATTGTGC+AGG | - | chr7_1:73539782-73539801 | Msa1037030:five_prime_UTR | 40.0% | |
| TGCAACTATGGCTTCGTATC+AGG | - | chr7_1:73535318-73535337 | Msa1037030:three_prime_UTR | 45.0% | |
| GCAACTATGGCTTCGTATCA+GGG | - | chr7_1:73535319-73535338 | Msa1037030:three_prime_UTR | 45.0% | |
| !! | GCAGGTTGGTTCTTACTTTG+TGG | - | chr7_1:73535462-73535481 | Msa1037030:three_prime_UTR | 45.0% |
| TGAGACTGCATCTGATGTCT+TGG | - | chr7_1:73535579-73535598 | Msa1037030:CDS | 45.0% | |
| TCCCTTCAAAAATACCCTCG+TGG | + | chr7_1:73536001-73536020 | None:intergenic | 45.0% | |
| CGATCAATTCTCTGGACTCT+TGG | - | chr7_1:73536172-73536191 | Msa1037030:intron | 45.0% | |
| AATTCTCTGGACTCTTGGGA+TGG | - | chr7_1:73536177-73536196 | Msa1037030:intron | 45.0% | |
| GGATGGAGGAGTGATTGTAA+TGG | - | chr7_1:73536194-73536213 | Msa1037030:intron | 45.0% | |
| AGATGTAGTGCATCCGAATC+TGG | - | chr7_1:73536335-73536354 | Msa1037030:intron | 45.0% | |
| TCAATCCTTTCAGATGCCAC+CGG | + | chr7_1:73536363-73536382 | None:intergenic | 45.0% | |
| ! | CAAGTCTGGGATAGCAGAAT+TGG | - | chr7_1:73536589-73536608 | Msa1037030:intron | 45.0% |
| GGAAGACTATACTTGTCCAC+TGG | + | chr7_1:73536801-73536820 | None:intergenic | 45.0% | |
| AGATTTCGAGACCGAAGTTG+TGG | - | chr7_1:73536848-73536867 | Msa1037030:intron | 45.0% | |
| GGTAGATGAAACTCCTGTAC+AGG | - | chr7_1:73536869-73536888 | Msa1037030:intron | 45.0% | |
| AGATGAAACTCCTGTACAGG+AGG | - | chr7_1:73536872-73536891 | Msa1037030:intron | 45.0% | |
| TGTGCAACATTATGCACTGG+CGG | + | chr7_1:73536903-73536922 | None:intergenic | 45.0% | |
| ! | TCCTGTGGAAGAGTCTTTTG+AGG | - | chr7_1:73536947-73536966 | Msa1037030:CDS | 45.0% |
| TCCTCAAAAGACTCTTCCAC+AGG | + | chr7_1:73536951-73536970 | None:intergenic | 45.0% | |
| GAATGTTGTGGAGCATGTTG+TGG | + | chr7_1:73537182-73537201 | None:intergenic | 45.0% | |
| !!! | AGGAGGAGGAGCACTTTTAA+AGG | + | chr7_1:73537204-73537223 | None:intergenic | 45.0% |
| ! | TGATTGTACTCTGAAGGAGG+AGG | + | chr7_1:73537218-73537237 | None:intergenic | 45.0% |
| !! | GAAGGCTACCGATTTGAAGA+AGG | - | chr7_1:73537341-73537360 | Msa1037030:intron | 45.0% |
| !! | AAACACGCGTAACGGATGAT+CGG | + | chr7_1:73537466-73537485 | None:intergenic | 45.0% |
| TACTGAAGCTGAGATTGACC+AGG | - | chr7_1:73537843-73537862 | Msa1037030:intron | 45.0% | |
| GTGGAATTCGAAGACGTTGT+TGG | - | chr7_1:73538036-73538055 | Msa1037030:CDS | 45.0% | |
| !! | TTTTTGGCCAAATACCTCCG+TGG | - | chr7_1:73538231-73538250 | Msa1037030:CDS | 45.0% |
| ! | TTTTGGCCAAATACCTCCGT+GGG | - | chr7_1:73538232-73538251 | Msa1037030:CDS | 45.0% |
| CGTGAAACTAAAAGGACCCA+CGG | + | chr7_1:73538251-73538270 | None:intergenic | 45.0% | |
| CATGAAACTTAAAGGACCCG+GGG | - | chr7_1:73538560-73538579 | Msa1037030:intron | 45.0% | |
| ! | CTTCTCCCATTCAACTTGCT+GGG | - | chr7_1:73538991-73539010 | Msa1037030:intron | 45.0% |
| TGGGCGACCAATATACATAG+AGG | - | chr7_1:73539010-73539029 | Msa1037030:intron | 45.0% | |
| TCTTACGTCTCTTGATCAGG+AGG | - | chr7_1:73539336-73539355 | Msa1037030:intron | 45.0% | |
| TATCCAACAGATGCTCCTAG+AGG | - | chr7_1:73539381-73539400 | Msa1037030:intron | 45.0% | |
| ATCCAACAGATGCTCCTAGA+GGG | - | chr7_1:73539382-73539401 | Msa1037030:intron | 45.0% | |
| ! | TGGAGTAGTCTGAAGTATCC+TGG | + | chr7_1:73539443-73539462 | None:intergenic | 45.0% |
| ATAACCATCACCTCTTGGTC+TGG | + | chr7_1:73539463-73539482 | None:intergenic | 45.0% | |
| !!! | TAAATTTTATTTTTTTTATG+TGG | - | chr7_1:73535389-73535408 | Msa1037030:three_prime_UTR | 5.0% |
| GAATGCGGAGAGAAAAACGC+AGG | + | chr7_1:73535193-73535212 | None:intergenic | 50.0% | |
| AACCTTCTTCCTTGCTCCTC+AGG | - | chr7_1:73536269-73536288 | Msa1037030:intron | 50.0% | |
| TTCCTTGCTCCTCAGGAGAA+GGG | - | chr7_1:73536276-73536295 | Msa1037030:intron | 50.0% | |
| AGTGCATCCGAATCTGGTAC+CGG | - | chr7_1:73536341-73536360 | Msa1037030:intron | 50.0% | |
| ! | GCTTCTTTTGCTGAACCACC+TGG | - | chr7_1:73536402-73536421 | Msa1037030:intron | 50.0% |
| TTCGGCAGAATTAAGCCGGA+TGG | - | chr7_1:73537877-73537896 | Msa1037030:intron | 50.0% | |
| TAGTGAGAGGAGCTACCTGT+CGG | + | chr7_1:73537918-73537937 | None:intergenic | 50.0% | |
| TGGCACACAAAATGCGCTTC+AGG | - | chr7_1:73538056-73538075 | Msa1037030:CDS | 50.0% | |
| !! | AAAGGACCCACGGAGGTATT+TGG | + | chr7_1:73538241-73538260 | None:intergenic | 50.0% |
| GAAACTAAAAGGACCCACGG+AGG | + | chr7_1:73538248-73538267 | None:intergenic | 50.0% | |
| ATTGAGGCCAAATACCTCCC+CGG | + | chr7_1:73538580-73538599 | None:intergenic | 50.0% | |
| GCTTCTCCCATTCAACTTGC+TGG | - | chr7_1:73538990-73539009 | Msa1037030:intron | 50.0% | |
| ACGTCTCTTGATCAGGAGGA+AGG | - | chr7_1:73539340-73539359 | Msa1037030:intron | 50.0% | |
| CGTCTCTTGATCAGGAGGAA+GGG | - | chr7_1:73539341-73539360 | Msa1037030:intron | 50.0% | |
| GTCTCTTGATCAGGAGGAAG+GGG | - | chr7_1:73539342-73539361 | Msa1037030:intron | 50.0% | |
| TCAGACTACTCCAGACCAAG+AGG | - | chr7_1:73539450-73539469 | Msa1037030:CDS | 50.0% | |
| TACTCCAGACCAAGAGGTGA+TGG | - | chr7_1:73539456-73539475 | Msa1037030:CDS | 50.0% | |
| ! | GGTGATGGTTATCTTCAGCG+TGG | - | chr7_1:73539471-73539490 | Msa1037030:CDS | 50.0% |
| TCTTCAGCGTGGTTCACGAT+AGG | - | chr7_1:73539482-73539501 | Msa1037030:CDS | 50.0% | |
| ! | ATTGGCCTCATGTCGGATTG+TGG | - | chr7_1:73539729-73539748 | Msa1037030:intron | 50.0% |
| AGCATCCACAATCCGACATG+AGG | + | chr7_1:73539737-73539756 | None:intergenic | 50.0% | |
| TCTCTGGACTCTTGGGATGG+AGG | - | chr7_1:73536180-73536199 | Msa1037030:intron | 55.0% | |
| CTCCTGAGGAGCAAGGAAGA+AGG | + | chr7_1:73536274-73536293 | None:intergenic | 55.0% | |
| CTTCCTTGCTCCTCAGGAGA+AGG | - | chr7_1:73536275-73536294 | Msa1037030:intron | 55.0% | |
| AACCCTTCTCCTGAGGAGCA+AGG | + | chr7_1:73536281-73536300 | None:intergenic | 55.0% | |
| GATGCCACCGGTACCAGATT+CGG | + | chr7_1:73536351-73536370 | None:intergenic | 55.0% | |
| !! | TGGTACCGGTGGCATCTGAA+AGG | - | chr7_1:73536355-73536374 | Msa1037030:intron | 55.0% |
| AGTTGCTGCTGCTGCTGTTC+AGG | + | chr7_1:73536822-73536841 | None:intergenic | 55.0% | |
| AGACTCTTCCACAGGAGCAG+CGG | + | chr7_1:73536943-73536962 | None:intergenic | 55.0% | |
| ! | AGACAACGCTGCTTGGCCTT+TGG | + | chr7_1:73537153-73537172 | None:intergenic | 55.0% |
| ! | ACCACTGACTGCTGAACAGC+AGG | + | chr7_1:73537251-73537270 | None:intergenic | 55.0% |
| GAGCTTGACTGCTGGAAAGC+AGG | + | chr7_1:73537278-73537297 | None:intergenic | 55.0% | |
| CAGATGCTGAGCTTGACTGC+TGG | + | chr7_1:73537286-73537305 | None:intergenic | 55.0% | |
| TGTTTCAGAGTCTGGGCCTG+AGG | - | chr7_1:73537310-73537329 | Msa1037030:intron | 55.0% | |
| ! | GGTGCTTTGTTCTACCACCC+TGG | - | chr7_1:73537649-73537668 | Msa1037030:CDS | 55.0% |
| GAAACTTAAAGGACCCGGGG+AGG | - | chr7_1:73538563-73538582 | Msa1037030:intron | 55.0% | |
| !! | AAAGGACCCGGGGAGGTATT+TGG | - | chr7_1:73538570-73538589 | Msa1037030:CDS | 55.0% |
| TTGAGGCCAAATACCTCCCC+GGG | + | chr7_1:73538579-73538598 | None:intergenic | 55.0% | |
| ! | GGTCGCCCAGCAAGTTGAAT+GGG | + | chr7_1:73538999-73539018 | None:intergenic | 55.0% |
| ! | TGGTCGCCCAGCAAGTTGAA+TGG | + | chr7_1:73539000-73539019 | None:intergenic | 55.0% |
| CGAGTTGCACTGCTAGTGCT+TGG | + | chr7_1:73539044-73539063 | None:intergenic | 55.0% | |
| AGCACTAGCAGTGCAACTCG+AGG | - | chr7_1:73539044-73539063 | Msa1037030:intron | 55.0% | |
| ACTAGCAGTGCAACTCGAGG+AGG | - | chr7_1:73539047-73539066 | Msa1037030:intron | 55.0% | |
| TGATCAGGAGGAAGGGGAAG+AGG | - | chr7_1:73539348-73539367 | Msa1037030:intron | 55.0% | |
| !!! | GATGCTCCTAGAGGGCGTTT+TGG | - | chr7_1:73539390-73539409 | Msa1037030:intron | 55.0% |
| !! | GCGTTTTGGTGGTCGTAGCT+CGG | - | chr7_1:73539404-73539423 | Msa1037030:CDS | 55.0% |
| !! | CGTTTTGGTGGTCGTAGCTC+GGG | - | chr7_1:73539405-73539424 | Msa1037030:CDS | 55.0% |
| CTCGGGAAGGGGATATTACC+AGG | - | chr7_1:73539422-73539441 | Msa1037030:CDS | 55.0% | |
| GGGTTCAGTTAGTGCTGCCC+AGG | - | chr7_1:73535339-73535358 | Msa1037030:three_prime_UTR | 60.0% | |
| ! | GCATCCGAATCTGGTACCGG+TGG | - | chr7_1:73536344-73536363 | Msa1037030:intron | 60.0% |
| ACTCTTCCACAGGAGCAGCG+GGG | + | chr7_1:73536941-73536960 | None:intergenic | 60.0% | |
| GACTCTTCCACAGGAGCAGC+GGG | + | chr7_1:73536942-73536961 | None:intergenic | 60.0% | |
| GAGCAGCAGACAACGCTGCT+TGG | + | chr7_1:73537160-73537179 | None:intergenic | 60.0% | |
| GCCTGCTGTTCAGCAGTCAG+TGG | - | chr7_1:73537247-73537266 | Msa1037030:intron | 60.0% | |
| TAGCCTTCCTCAGCTGCCTC+AGG | + | chr7_1:73537329-73537348 | None:intergenic | 60.0% | |
| !! | CGCCCTCTAGGAGCATCTGT+TGG | + | chr7_1:73539387-73539406 | None:intergenic | 60.0% |
| !!! | GCTCCTAGAGGGCGTTTTGG+TGG | - | chr7_1:73539393-73539412 | Msa1037030:CDS | 60.0% |
| CGACCACCAAAACGCCCTCT+AGG | + | chr7_1:73539399-73539418 | None:intergenic | 60.0% | |
| ! | TTGGTGGTCGTAGCTCGGGA+AGG | - | chr7_1:73539409-73539428 | Msa1037030:CDS | 60.0% |
| TGGTGGTCGTAGCTCGGGAA+GGG | - | chr7_1:73539410-73539429 | Msa1037030:CDS | 60.0% | |
| GGCGGAGATGCCTCCTGTAC+AGG | + | chr7_1:73536885-73536904 | None:intergenic | 65.0% | |
| CAGGAGCAGCGGGGGTTTCA+CGG | + | chr7_1:73536932-73536951 | None:intergenic | 65.0% | |
| TGAAACCCCCGCTGCTCCTG+TGG | - | chr7_1:73536932-73536951 | Msa1037030:CDS | 65.0% | |
| CTCTTCCACAGGAGCAGCGG+GGG | + | chr7_1:73536940-73536959 | None:intergenic | 65.0% | |
| GGAGGAAGGGGAAGAGGCAG+AGG | - | chr7_1:73539354-73539373 | Msa1037030:intron | 65.0% | |
| GGTGGTCGTAGCTCGGGAAG+GGG | - | chr7_1:73539411-73539430 | Msa1037030:CDS | 65.0% | |
| GTCTGGGCCTGAGGCAGCTG+AGG | - | chr7_1:73537319-73537338 | Msa1037030:intron | 70.0% | |
| GGGCCTGAGGCAGCTGAGGA+AGG | - | chr7_1:73537323-73537342 | Msa1037030:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 73535080 | 73539913 | 73535080 | ID=Msa1037030;Name=Msa1037030 |
| chr7_1 | mRNA | 73535080 | 73539913 | 73535080 | ID=Msa1037030-mRNA-1;Parent=Msa1037030;Name=Msa1037030-mRNA-1;_AED=0.09;_eAED=0.09;_QI=216|0.88|0.9|1|0.88|0.8|10|410|471 |
| chr7_1 | exon | 73535080 | 73535638 | 73535080 | ID=Msa1037030-mRNA-1:exon:18156;Parent=Msa1037030-mRNA-1 |
| chr7_1 | exon | 73535922 | 73536003 | 73535922 | ID=Msa1037030-mRNA-1:exon:18155;Parent=Msa1037030-mRNA-1 |
| chr7_1 | exon | 73536916 | 73536981 | 73536916 | ID=Msa1037030-mRNA-1:exon:18154;Parent=Msa1037030-mRNA-1 |
| chr7_1 | exon | 73537072 | 73537193 | 73537072 | ID=Msa1037030-mRNA-1:exon:18153;Parent=Msa1037030-mRNA-1 |
| chr7_1 | exon | 73537631 | 73537850 | 73537631 | ID=Msa1037030-mRNA-1:exon:18152;Parent=Msa1037030-mRNA-1 |
| chr7_1 | exon | 73537995 | 73538260 | 73537995 | ID=Msa1037030-mRNA-1:exon:18151;Parent=Msa1037030-mRNA-1 |
| chr7_1 | exon | 73538570 | 73538909 | 73538570 | ID=Msa1037030-mRNA-1:exon:18150;Parent=Msa1037030-mRNA-1 |
| chr7_1 | exon | 73539393 | 73539527 | 73539393 | ID=Msa1037030-mRNA-1:exon:18149;Parent=Msa1037030-mRNA-1 |
| chr7_1 | exon | 73539633 | 73539709 | 73539633 | ID=Msa1037030-mRNA-1:exon:18148;Parent=Msa1037030-mRNA-1 |
| chr7_1 | exon | 73539739 | 73539913 | 73539739 | ID=Msa1037030-mRNA-1:exon:18147;Parent=Msa1037030-mRNA-1 |
| chr7_1 | five_prime_UTR | 73539739 | 73539913 | 73539739 | ID=Msa1037030-mRNA-1:five_prime_utr;Parent=Msa1037030-mRNA-1 |
| chr7_1 | five_prime_UTR | 73539669 | 73539709 | 73539669 | ID=Msa1037030-mRNA-1:five_prime_utr;Parent=Msa1037030-mRNA-1 |
| chr7_1 | CDS | 73539633 | 73539668 | 73539633 | ID=Msa1037030-mRNA-1:cds;Parent=Msa1037030-mRNA-1 |
| chr7_1 | CDS | 73539393 | 73539527 | 73539393 | ID=Msa1037030-mRNA-1:cds;Parent=Msa1037030-mRNA-1 |
| chr7_1 | CDS | 73538570 | 73538909 | 73538570 | ID=Msa1037030-mRNA-1:cds;Parent=Msa1037030-mRNA-1 |
| chr7_1 | CDS | 73537995 | 73538260 | 73537995 | ID=Msa1037030-mRNA-1:cds;Parent=Msa1037030-mRNA-1 |
| chr7_1 | CDS | 73537631 | 73537850 | 73537631 | ID=Msa1037030-mRNA-1:cds;Parent=Msa1037030-mRNA-1 |
| chr7_1 | CDS | 73537072 | 73537193 | 73537072 | ID=Msa1037030-mRNA-1:cds;Parent=Msa1037030-mRNA-1 |
| chr7_1 | CDS | 73536916 | 73536981 | 73536916 | ID=Msa1037030-mRNA-1:cds;Parent=Msa1037030-mRNA-1 |
| chr7_1 | CDS | 73535922 | 73536003 | 73535922 | ID=Msa1037030-mRNA-1:cds;Parent=Msa1037030-mRNA-1 |
| chr7_1 | CDS | 73535490 | 73535638 | 73535490 | ID=Msa1037030-mRNA-1:cds;Parent=Msa1037030-mRNA-1 |
| chr7_1 | three_prime_UTR | 73535080 | 73535489 | 73535080 | ID=Msa1037030-mRNA-1:three_prime_utr;Parent=Msa1037030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
