AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0663920

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0663920 MtrunA17_Chr4g0001761 92.051 390 5 1 24 413 1 364 0.0 736
Msa0663920 MtrunA17_Chr3g0136811 70.801 387 84 3 24 407 1 361 0.0 573
Msa0663920 MtrunA17_Chr1g0150071 65.104 384 107 2 24 406 1 358 0.0 521
Msa0663920 MtrunA17_Chr4g0007811 53.371 178 33 2 63 240 54 181 4.51e-56 184
Msa0663920 MtrunA17_Chr5g0407161 41.618 173 93 4 209 380 184 349 1.73e-35 134
Msa0663920 MtrunA17_Chr1g0194191 35.484 248 130 7 166 405 140 365 4.28e-34 130
Msa0663920 MtrunA17_Chr3g0138281 37.379 206 103 4 209 412 183 364 1.12e-33 129
Msa0663920 MtrunA17_Chr4g0065141 38.636 176 104 1 204 379 181 352 1.06e-32 127
Msa0663920 MtrunA17_Chr2g0293811 41.176 170 91 3 207 375 168 329 1.43e-32 126
Msa0663920 MtrunA17_Chr5g0435721 32.899 307 133 10 46 347 192 430 1.01e-31 125
Msa0663920 MtrunA17_Chr3g0127091 28.500 400 181 13 2 374 25 346 1.96e-31 123
Msa0663920 MtrunA17_Chr3g0144111 37.870 169 98 2 209 377 66 227 2.00e-31 120
Msa0663920 MtrunA17_Chr2g0299981 31.421 366 167 14 47 378 221 536 1.35e-30 123
Msa0663920 MtrunA17_Chr3g0112291 32.343 303 134 10 46 343 92 328 1.70e-30 120
Msa0663920 MtrunA17_Chr3g0136711 36.170 188 99 4 207 390 124 294 2.07e-27 110
Msa0663920 MtrunA17_Chr1g0150451 35.632 174 92 3 207 377 167 323 4.27e-26 107
Msa0663920 MtrunA17_Chr1g0171571 28.490 351 154 14 44 383 385 649 1.30e-25 109
Msa0663920 MtrunA17_Chr2g0317021 36.932 176 86 5 209 378 177 333 2.17e-24 102
Msa0663920 MtrunA17_Chr1g0212961 36.207 174 90 5 207 377 182 337 6.75e-24 101
Msa0663920 MtrunA17_Chr3g0126511 37.791 172 87 4 209 377 186 340 9.15e-24 101
Msa0663920 MtrunA17_Chr5g0426141 37.500 176 85 6 209 378 126 282 1.28e-23 99.8
Msa0663920 MtrunA17_Chr2g0279151 37.500 176 85 6 209 378 125 281 1.40e-23 99.8
Msa0663920 MtrunA17_Chr3g0105371 36.111 180 94 6 207 379 175 340 2.64e-23 100
Msa0663920 MtrunA17_Chr3g0105351 34.078 179 99 5 207 379 151 316 2.79e-23 99.4
Msa0663920 MtrunA17_Chr3g0115851 42.857 133 59 4 209 335 126 247 2.87e-23 98.6
Msa0663920 MtrunA17_Chr4g0050381 34.091 176 91 5 209 378 121 277 5.43e-23 97.8
Msa0663920 MtrunA17_Chr5g0430481 41.985 131 63 2 209 335 213 334 6.87e-23 99.4
Msa0663920 MtrunA17_Chr6g0483411 32.620 187 97 6 209 378 145 319 2.12e-21 94.4
Msa0663920 MtrunA17_Chr3g0135961 36.170 188 91 7 209 378 364 540 2.27e-20 93.2
Msa0663920 MtrunA17_Chr4g0070871 41.221 131 65 3 208 335 324 445 3.08e-20 92.8
Msa0663920 MtrunA17_Chr4g0051661 34.857 175 89 6 209 377 242 397 4.95e-20 91.3
Msa0663920 MtrunA17_Chr8g0360351 35.429 175 88 5 209 377 126 281 7.48e-20 89.0
Msa0663920 MtrunA17_Chr1g0150781 41.481 135 67 4 209 340 368 493 1.34e-19 90.9
Msa0663920 MtrunA17_Chr5g0396731 38.462 143 76 2 202 341 170 303 3.11e-19 88.6
Msa0663920 MtrunA17_Chr8g0389921 32.778 180 103 4 209 379 266 436 1.37e-17 84.3
Msa0663920 MtrunA17_Chr4g0068971 45.161 93 48 1 249 341 110 199 2.85e-17 81.3
Msa0663920 MtrunA17_Chr1g0158781 34.518 197 101 5 202 383 202 385 2.68e-15 77.0
Msa0663920 MtrunA17_Chr7g0249421 35.616 146 68 4 209 336 207 344 7.29e-15 76.3
Msa0663920 MtrunA17_Chr1g0181901 30.058 173 89 6 191 336 130 297 1.91e-14 74.7
Msa0663920 MtrunA17_Chr8g0371321 27.935 247 132 6 208 412 146 388 8.00e-14 72.8
Msa0663920 MtrunA17_Chr1g0207571 31.677 161 76 5 207 336 127 284 1.07e-13 72.0
Msa0663920 MtrunA17_Chr7g0221691 34.194 155 76 4 200 336 223 369 1.83e-13 71.6
Msa0663920 MtrunA17_Chr7g0256771 28.571 168 95 4 209 351 139 306 2.37e-13 70.5
Msa0663920 MtrunA17_Chr1g0192421 33.121 157 76 5 209 347 173 318 2.63e-13 70.9
Msa0663920 MtrunA17_Chr3g0089721 21.835 316 146 10 75 362 68 310 2.74e-13 70.9
Msa0663920 MtrunA17_Chr3g0089711 21.835 316 146 10 75 362 68 310 2.96e-13 70.9
Msa0663920 MtrunA17_Chr2g0295401 30.323 155 82 4 200 336 167 313 4.28e-13 70.1
Msa0663920 MtrunA17_Chr4g0067711 29.677 155 83 4 200 336 166 312 7.39e-13 69.3
Msa0663920 MtrunA17_Chr1g0213351 30.508 177 85 6 191 337 134 302 8.15e-13 69.3
Msa0663920 MtrunA17_Chr1g0209451 27.602 221 114 7 205 409 128 318 1.69e-12 68.6
Msa0663920 MtrunA17_Chr1g0151781 32.414 145 73 4 209 336 152 288 2.13e-12 67.8
Msa0663920 MtrunA17_Chr2g0286951 30.097 206 112 7 209 386 149 350 2.18e-12 68.2
Msa0663920 MtrunA17_Chr7g0250061 26.257 179 100 6 184 336 125 297 2.33e-12 68.2
Msa0663920 MtrunA17_Chr7g0256751 27.368 190 106 6 208 370 137 321 2.34e-12 68.2
Msa0663920 MtrunA17_Chr7g0272061 27.273 198 110 6 209 384 183 368 2.97e-12 67.8
Msa0663920 MtrunA17_Chr2g0324061 33.562 146 71 4 209 336 186 323 4.20e-12 67.8
Msa0663920 MtrunA17_Chr7g0243571 31.034 145 75 4 209 336 188 324 1.81e-11 65.5
Msa0663920 MtrunA17_Chr2g0294291 27.119 177 91 5 191 337 130 298 1.93e-11 65.1
Msa0663920 MtrunA17_Chr1g0211251 27.326 172 95 4 191 336 135 302 2.87e-11 64.7
Msa0663920 MtrunA17_Chr3g0089691 25.532 188 101 7 206 362 45 224 4.62e-11 63.5
Msa0663920 MtrunA17_Chr1g0175381 27.673 159 90 4 209 342 147 305 8.36e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0663920 AT4G31860.1 71.774 372 76 3 24 394 1 344 0.0 555
Msa0663920 AT2G25070.1 68.548 372 86 3 24 394 1 342 0.0 536
Msa0663920 AT2G25070.2 68.548 372 86 3 24 394 1 342 0.0 536
Msa0663920 AT4G31860.3 72.100 319 63 1 24 342 1 293 5.01e-172 483
Msa0663920 AT4G31860.2 71.761 301 59 1 24 324 1 275 3.00e-160 452
Msa0663920 AT1G07430.1 33.660 306 119 11 46 337 120 355 3.77e-34 132
Msa0663920 AT2G33700.1 42.012 169 91 2 209 377 183 344 3.01e-33 129
Msa0663920 AT2G25620.1 40.237 169 95 2 209 375 190 354 7.10e-33 128
Msa0663920 AT2G25620.2 40.237 169 95 2 209 375 190 354 7.10e-33 128
Msa0663920 AT1G48040.1 41.011 178 89 4 207 379 185 351 1.25e-31 124
Msa0663920 AT3G51470.1 28.479 309 195 7 72 377 42 327 1.26e-31 124
Msa0663920 AT3G51470.2 38.462 169 97 2 209 377 122 283 1.76e-31 122
Msa0663920 AT3G62260.3 40.462 173 93 4 207 377 95 259 4.33e-31 120
Msa0663920 AT3G62260.2 40.462 173 93 4 207 377 185 349 1.21e-30 121
Msa0663920 AT3G62260.1 40.462 173 93 4 207 377 184 348 1.30e-30 121
Msa0663920 AT5G51760.2 30.194 361 168 12 47 379 79 383 6.88e-30 119
Msa0663920 AT5G51760.1 30.194 361 168 12 47 379 109 413 1.15e-29 119
Msa0663920 AT3G17250.1 37.079 178 98 3 207 379 227 395 8.21e-29 117
Msa0663920 AT5G53140.1 34.673 199 110 4 209 404 193 374 1.14e-27 114
Msa0663920 AT5G53140.2 34.673 199 110 4 209 404 193 374 1.14e-27 114
Msa0663920 AT5G10740.1 36.782 174 90 3 207 377 123 279 1.62e-27 112
Msa0663920 AT5G10740.2 36.782 174 90 3 207 377 123 279 1.62e-27 112
Msa0663920 AT1G17550.1 30.449 312 140 8 47 335 189 446 5.75e-27 113
Msa0663920 AT1G17550.2 30.449 312 140 8 47 335 189 446 5.75e-27 113
Msa0663920 AT3G11410.1 31.741 293 132 9 46 330 104 336 6.01e-27 111
Msa0663920 AT4G31750.2 36.207 174 91 3 207 377 123 279 1.86e-26 108
Msa0663920 AT4G31750.1 36.207 174 91 3 207 377 123 279 2.09e-26 108
Msa0663920 AT4G31750.3 36.207 174 91 3 207 377 123 279 2.09e-26 108
Msa0663920 AT5G24940.1 31.140 228 125 5 188 412 113 311 3.63e-26 110
Msa0663920 AT1G67820.2 30.333 300 117 9 40 333 81 294 4.56e-26 109
Msa0663920 AT1G67820.1 30.333 300 117 9 40 333 117 330 5.18e-26 109
Msa0663920 AT1G43900.1 37.714 175 88 5 207 378 213 369 1.02e-25 107
Msa0663920 AT3G15260.2 37.853 177 83 7 209 378 133 289 1.03e-23 100
Msa0663920 AT3G15260.1 37.853 177 83 7 209 378 133 289 1.03e-23 100
Msa0663920 AT4G27800.2 34.911 169 86 2 209 353 160 328 2.15e-23 100
Msa0663920 AT4G27800.1 33.158 190 99 3 209 374 160 345 3.37e-23 100
Msa0663920 AT4G28400.3 43.284 134 59 4 209 336 105 227 6.99e-23 97.4
Msa0663920 AT4G28400.1 43.284 134 59 4 209 336 127 249 1.30e-22 97.4
Msa0663920 AT4G27800.3 34.940 166 84 2 209 350 160 325 1.64e-22 97.8
Msa0663920 AT5G59220.1 42.958 142 66 4 206 341 215 347 2.24e-22 98.6
Msa0663920 AT1G07160.1 35.593 177 92 6 209 377 214 376 2.61e-22 98.2
Msa0663920 AT2G40180.1 35.000 180 97 8 209 381 223 389 9.38e-22 96.7
Msa0663920 AT2G30020.1 35.795 176 94 6 209 378 231 393 1.32e-21 96.3
Msa0663920 AT2G29380.1 45.926 135 57 5 202 330 180 304 1.63e-21 95.5
Msa0663920 AT2G40860.4 36.464 181 91 8 209 383 393 555 3.44e-21 96.3
Msa0663920 AT5G57050.2 36.628 172 94 4 209 377 191 350 4.55e-21 94.7
Msa0663920 AT5G57050.1 36.628 172 94 4 209 377 231 390 5.08e-21 94.7
Msa0663920 AT2G40860.1 36.464 181 91 8 209 383 491 653 6.03e-21 95.9
Msa0663920 AT4G26080.1 40.146 137 70 3 207 340 239 366 1.53e-20 93.6
Msa0663920 AT1G72770.4 43.846 130 61 3 209 335 326 446 1.93e-20 93.6
Msa0663920 AT1G72770.1 43.846 130 61 3 209 335 326 446 1.93e-20 93.6
Msa0663920 AT1G72770.3 43.846 130 61 3 209 335 326 446 1.93e-20 93.6
Msa0663920 AT2G20630.1 40.299 134 63 4 209 336 123 245 2.16e-20 90.9
Msa0663920 AT4G28400.2 41.481 135 61 5 209 336 127 250 3.69e-20 89.7
Msa0663920 AT2G20630.2 40.299 134 63 4 209 336 123 245 3.80e-20 90.5
Msa0663920 AT2G34740.1 32.778 180 95 7 205 377 174 334 3.91e-20 91.3
Msa0663920 AT1G78200.5 40.152 132 64 4 209 334 80 202 5.53e-20 89.0
Msa0663920 AT1G78200.4 40.152 132 64 4 209 334 80 202 5.53e-20 89.0
Msa0663920 AT1G78200.1 40.152 132 64 4 209 334 125 247 1.47e-19 88.6
Msa0663920 AT1G78200.3 40.152 132 64 4 209 334 125 247 1.47e-19 88.6
Msa0663920 AT1G78200.2 40.152 132 64 4 209 334 125 247 1.47e-19 88.6
Msa0663920 AT1G18030.1 26.301 365 166 14 37 378 65 349 1.66e-19 89.7
Msa0663920 AT2G40860.2 39.130 138 70 4 209 341 491 619 5.38e-19 89.7
Msa0663920 AT1G34750.2 37.584 149 73 5 209 348 126 263 7.64e-19 86.7
Msa0663920 AT1G34750.1 37.584 149 73 5 209 348 126 263 7.64e-19 86.7
Msa0663920 AT1G34750.3 37.584 149 73 5 209 348 126 263 7.64e-19 86.7
Msa0663920 AT2G34740.3 38.583 127 60 5 205 324 170 285 4.51e-17 82.0
Msa0663920 AT2G34740.2 38.583 127 60 5 205 324 188 303 4.85e-17 82.0
Msa0663920 AT1G22280.3 36.090 133 68 4 209 335 131 252 9.94e-17 80.5
Msa0663920 AT1G22280.1 36.090 133 68 4 209 335 125 246 1.03e-16 80.5
Msa0663920 AT3G63340.12 24.672 381 207 12 77 399 114 472 3.10e-16 80.9
Msa0663920 AT3G63340.8 27.309 249 118 8 207 399 231 472 3.16e-16 81.6
Msa0663920 AT3G63340.6 27.309 249 118 8 207 399 231 472 3.35e-16 81.6
Msa0663920 AT3G63340.3 27.309 249 118 8 207 399 231 472 3.35e-16 81.6
Msa0663920 AT3G63340.10 27.309 249 118 8 207 399 231 472 3.35e-16 81.6
Msa0663920 AT3G63340.4 27.309 249 118 8 207 399 231 472 3.35e-16 81.6
Msa0663920 AT3G63340.7 27.309 249 118 8 207 399 231 472 3.49e-16 81.3
Msa0663920 AT3G63340.5 27.309 249 118 8 207 399 231 472 3.71e-16 81.3
Msa0663920 AT3G63340.1 27.309 249 118 8 207 399 231 472 3.71e-16 81.3
Msa0663920 AT5G02760.1 33.962 159 73 4 207 337 138 292 3.86e-16 79.7
Msa0663920 AT1G34750.4 40.164 122 56 4 209 324 126 236 4.05e-16 77.8
Msa0663920 AT3G16800.4 35.570 149 69 5 209 338 75 215 4.10e-16 78.2
Msa0663920 AT3G16800.6 35.570 149 69 5 209 338 75 215 4.10e-16 78.2
Msa0663920 AT3G63340.11 24.737 380 208 12 77 399 114 472 4.25e-16 80.9
Msa0663920 AT3G16800.2 35.570 149 69 5 209 338 170 310 1.18e-15 78.2
Msa0663920 AT3G16800.1 35.570 149 69 5 209 338 170 310 1.18e-15 78.2
Msa0663920 AT3G16800.3 35.570 149 69 5 209 338 170 310 1.18e-15 78.2
Msa0663920 AT1G18030.2 35.075 134 63 3 209 326 175 300 1.23e-15 77.8
Msa0663920 AT3G55050.1 26.531 294 116 11 74 337 83 306 2.13e-15 77.8
Msa0663920 AT3G55050.2 26.531 294 116 11 74 337 83 306 2.13e-15 77.8
Msa0663920 AT4G38520.2 34.615 156 76 4 207 336 147 302 5.50e-15 76.6
Msa0663920 AT4G38520.1 34.615 156 76 4 207 336 147 302 5.50e-15 76.6
Msa0663920 AT1G16220.1 30.319 188 102 6 208 374 197 376 1.50e-14 75.9
Msa0663920 AT3G63340.2 30.636 173 100 6 240 399 340 505 1.65e-14 76.3
Msa0663920 AT5G59220.2 51.190 84 35 2 206 283 215 298 2.72e-14 73.6
Msa0663920 AT1G79630.6 33.562 146 71 4 209 336 112 249 3.30e-14 74.3
Msa0663920 AT1G79630.3 33.562 146 71 4 209 336 112 249 3.30e-14 74.3
Msa0663920 AT1G79630.4 33.562 146 71 4 209 336 112 249 3.30e-14 74.3
Msa0663920 AT1G79630.5 33.562 146 71 4 209 336 112 249 3.30e-14 74.3
Msa0663920 AT1G79630.8 33.562 146 71 4 209 336 218 355 3.49e-14 74.7
Msa0663920 AT3G51370.2 30.769 156 82 3 208 337 61 216 3.66e-14 73.2
Msa0663920 AT3G02750.2 34.932 146 69 4 209 336 216 353 3.72e-14 74.3
Msa0663920 AT3G02750.1 34.932 146 69 4 209 336 216 353 3.72e-14 74.3
Msa0663920 AT1G79630.2 33.562 146 71 4 209 336 152 289 3.98e-14 74.3
Msa0663920 AT1G79630.7 33.562 146 71 4 209 336 152 289 3.98e-14 74.3
Msa0663920 AT1G79630.1 33.562 146 71 4 209 336 222 359 4.17e-14 74.3
Msa0663920 AT3G51370.1 30.968 155 81 3 208 336 146 300 5.46e-14 73.6
Msa0663920 AT3G51370.3 30.968 155 81 3 208 336 146 300 5.46e-14 73.6
Msa0663920 AT5G36250.1 33.562 146 71 4 209 336 207 344 5.76e-14 73.9
Msa0663920 AT5G26010.1 32.530 166 75 5 189 336 137 283 7.72e-14 72.4
Msa0663920 AT5G66080.2 28.571 175 95 4 191 339 32 202 2.88e-13 70.1
Msa0663920 AT5G66080.1 29.070 172 92 4 191 336 136 303 4.31e-13 70.9
Msa0663920 AT4G33920.1 25.152 330 139 15 47 342 36 291 5.63e-13 70.5
Msa0663920 AT4G03415.1 25.649 308 160 11 51 336 72 332 5.75e-13 70.9
Msa0663920 AT4G03415.3 25.649 308 160 11 51 336 72 332 5.75e-13 70.9
Msa0663920 AT4G03415.2 25.649 308 160 11 51 336 72 332 5.75e-13 70.9
Msa0663920 AT4G32950.1 32.192 146 73 5 209 336 139 276 7.02e-13 69.7
Msa0663920 AT5G27930.1 28.351 194 112 6 200 375 168 352 1.13e-12 69.3
Msa0663920 AT5G27930.2 28.351 194 112 6 200 375 168 352 1.13e-12 69.3
Msa0663920 AT3G17090.2 29.870 154 83 3 209 337 153 306 1.19e-12 68.9
Msa0663920 AT3G05640.2 30.323 155 82 4 200 336 163 309 1.48e-12 68.9
Msa0663920 AT3G05640.1 30.323 155 82 4 200 336 163 309 1.48e-12 68.9
Msa0663920 AT3G05640.3 30.323 155 82 4 200 336 163 309 1.48e-12 68.9
Msa0663920 AT3G17090.1 28.736 174 95 4 191 339 139 308 1.91e-12 68.9
Msa0663920 AT4G08260.1 31.638 177 96 9 205 379 57 210 2.14e-12 66.6
Msa0663920 AT2G40860.3 40.351 114 54 4 209 317 491 595 3.86e-12 68.6
Msa0663920 AT3G12620.2 30.573 157 83 3 207 337 149 305 4.06e-12 67.8
Msa0663920 AT3G12620.1 30.573 157 83 3 207 337 149 305 4.06e-12 67.8
Msa0663920 AT4G33920.3 30.000 170 80 6 207 342 14 178 1.70e-11 64.7
Msa0663920 AT1G72770.2 51.316 76 34 1 209 281 326 401 2.39e-11 65.5
Msa0663920 AT1G72770.5 51.316 76 34 1 209 281 326 401 2.39e-11 65.5
Msa0663920 AT4G33920.2 30.000 170 80 6 207 342 44 208 2.48e-11 64.7

Find 150 sgRNAs with CRISPR-Local

Find 580 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCATTAGCCCGCAATAT+TGG 0.223595 4_4:+2847080 None:intergenic
CTGCTAGTTCATGGGGTTCT+TGG 0.232947 4_4:-2843498 Msa0663920:three_prime_UTR
AGTCAATGGAAGTTTGAATT+TGG 0.237602 4_4:-2845117 Msa0663920:CDS
GGCAGTCTTGGGAGATAAAA+TGG 0.276597 4_4:-2847597 Msa0663920:CDS
GCATGCAGCTCATCCGTATT+TGG 0.288717 4_4:-2849656 Msa0663920:CDS
GCAGGGTTGGCGTGCTTCTA+TGG 0.291283 4_4:-2850543 Msa0663920:CDS
GACTGTTGTGCCGGAGGATT+AGG 0.330484 4_4:+2843707 None:intergenic
AAGAATTCGGTGCAATGTTA+TGG 0.331964 4_4:-2843275 Msa0663920:three_prime_UTR
CAATATTGGGTCTTTGAAAC+TGG 0.332258 4_4:+2847094 None:intergenic
TTCATTGGCTTCACTACTCC+TGG 0.341678 4_4:+2847535 None:intergenic
GAAAACTTACCGTCTTTAAC+TGG 0.345488 4_4:+2844007 None:intergenic
GTATGCTTGAGGGGTTTATA+TGG 0.348426 4_4:-2847562 Msa0663920:CDS
TTAGAAGTTTCTTAAGAATT+CGG 0.349137 4_4:-2843288 Msa0663920:three_prime_UTR
TGATAGCTTGTGATGGGATA+TGG 0.355721 4_4:-2844167 Msa0663920:intron
TCTTTCTATCACAGGAGATA+TGG 0.357251 4_4:-2844950 Msa0663920:intron
TCTCATTAGCCCGCAATATT+GGG 0.364679 4_4:+2847081 None:intergenic
TTGAATTTGGCTAGAGCAAT+TGG 0.367218 4_4:-2845104 Msa0663920:intron
CCACTCATCGGCACGTTCAT+TGG 0.368458 4_4:+2847520 None:intergenic
GTTAACAATCATGTTGTCAT+TGG 0.376165 4_4:+2843365 None:intergenic
TATTGCAAGTTCAGAATTGC+TGG 0.382514 4_4:-2847057 Msa0663920:CDS
CTATGGTTTGTCTTCCATGC+AGG 0.383404 4_4:-2850561 Msa0663920:CDS
TGTGACAAACTGCTAGTTCA+TGG 0.385505 4_4:-2843507 Msa0663920:three_prime_UTR
CACGCCGTGCTTCCACAGTT+TGG 0.396252 4_4:+2846214 None:intergenic
AAACGTTCAGCAAGCAATAC+TGG 0.404647 4_4:-2843435 Msa0663920:three_prime_UTR
GTGGAGAGAATTGGCAGTCT+TGG 0.411163 4_4:-2847609 Msa0663920:CDS
TTTCAAAGACCCAATATTGC+GGG 0.413693 4_4:-2847090 Msa0663920:CDS
TTGCTTGTTAATTTACTGCT+TGG 0.422176 4_4:-2843155 Msa0663920:three_prime_UTR
GATAAAATGGAAAAGTTGTC+TGG 0.422547 4_4:-2847584 Msa0663920:CDS
AACGACAAGAATCTGAAATC+TGG 0.426961 4_4:+2843555 None:intergenic
TTGTGATTGCAGTTTGAGAT+GGG 0.431832 4_4:-2850647 Msa0663920:intron
CTTGGCTTTGTACATAAGCT+TGG 0.433363 4_4:-2843480 Msa0663920:three_prime_UTR
TGAGCATCAACAAACTGGTT+GGG 0.434508 4_4:+2843213 None:intergenic
TAGTGAGGGGAGGTGGTTCA+TGG 0.438484 4_4:-2843589 Msa0663920:three_prime_UTR
TGGAGAGAATTGGCAGTCTT+GGG 0.442455 4_4:-2847608 Msa0663920:CDS
TCTTTCTCAACCTCAAGATC+AGG 0.445083 4_4:+2845179 None:intergenic
ATCCAAGTTGGACGAGTCAA+TGG 0.447439 4_4:-2845131 Msa0663920:CDS
TTTGAACTGAATCAAGATCA+TGG 0.447964 4_4:+2843790 None:intergenic
ACAAAGAGGGTGGAGAGAAT+TGG 0.448478 4_4:-2847618 Msa0663920:CDS
AGGCATGAAGCTTATTTAGC+TGG 0.451028 4_4:-2848457 Msa0663920:CDS
TCTTACTTTGGTGTTTATGA+TGG 0.452467 4_4:-2849622 Msa0663920:CDS
CACCTGCTGGTGTAGAAACT+TGG 0.452978 4_4:+2848483 None:intergenic
GAAAAGTAAGAACCTGTCTC+TGG 0.454342 4_4:-2843337 Msa0663920:three_prime_UTR
TGTTGAGACATCGACTTCCT+TGG 0.455690 4_4:-2842894 Msa0663920:three_prime_UTR
TTGTCGTTAATCCTCAATAG+AGG 0.457238 4_4:-2843540 Msa0663920:three_prime_UTR
TTCCATTGACTCGTCCAACT+TGG 0.458711 4_4:+2845129 None:intergenic
TCACATGAGCATCAACAAAC+TGG 0.458966 4_4:+2843208 None:intergenic
ATTCTAGATGTGTGTTATCA+AGG 0.461406 4_4:-2846144 Msa0663920:CDS
ATCTTGAGGTTGAGAAAGAC+AGG 0.461799 4_4:-2845175 Msa0663920:CDS
GACGTAGACTCGTCCAAATA+CGG 0.469206 4_4:+2849643 None:intergenic
CTTGGTGACTTGAATATGAA+TGG 0.471187 4_4:-2843462 Msa0663920:three_prime_UTR
CAGCTTGTGGACTTTATACA+TGG 0.472596 4_4:-2844030 Msa0663920:CDS
AAATTTACAATCCTCTATTG+AGG 0.472821 4_4:+2843529 None:intergenic
GTGACAAACTGCTAGTTCAT+GGG 0.473401 4_4:-2843506 Msa0663920:three_prime_UTR
TGGCCCACTGAAATCAGAAT+GGG 0.475274 4_4:+2846234 None:intergenic
GCCTCTGAAGATGGTGAGAA+TGG 0.475288 4_4:-2850593 Msa0663920:CDS
AAGTTGTCTGGTATGCTTGA+GGG 0.483126 4_4:-2847572 Msa0663920:CDS
AAAGTCCACAAGCTGCTGGC+TGG 0.483577 4_4:+2844038 None:intergenic
TATGGTTTGTCTTCCATGCA+GGG 0.486339 4_4:-2850560 Msa0663920:CDS
GTATAAAGTCCACAAGCTGC+TGG 0.490931 4_4:+2844034 None:intergenic
ACAGAGAAGGCCTCTGAAGA+TGG 0.493254 4_4:-2850602 Msa0663920:CDS
GTATTTGCCTGCTGAAAAGC+AGG 0.497554 4_4:-2844911 Msa0663920:CDS
AGGTGCTTGGCACCAACAGC+TGG 0.500799 4_4:-2843836 Msa0663920:CDS
GAGCATCAACAAACTGGTTG+GGG 0.504676 4_4:+2843214 None:intergenic
GTTGTGATTGCAGTTTGAGA+TGG 0.505429 4_4:-2850648 Msa0663920:intron
ATGAATATGACTCCAGAGAC+AGG 0.506161 4_4:+2843325 None:intergenic
TTAATTCAAAATCAAGATTG+AGG 0.508014 4_4:+2842969 None:intergenic
TTTGGTGTTTATGATGGCCA+TGG 0.515356 4_4:-2849616 Msa0663920:CDS
AAACTTGTTGTTGCAAATGC+TGG 0.516391 4_4:-2846169 Msa0663920:CDS
GAAGCACTAGTGAGGGGAGG+TGG 0.524442 4_4:-2843596 Msa0663920:three_prime_UTR
TTTCTTGTGATAGCTTGTGA+TGG 0.525546 4_4:-2844174 Msa0663920:CDS
CTTTACAGAAATCTTTCCTA+AGG 0.526330 4_4:-2848420 Msa0663920:intron
GGCACCAACAGCTGGTGGTG+AGG 0.528139 4_4:-2843828 Msa0663920:CDS
AGGGGTTTATATGGTCTCCC+AGG 0.533536 4_4:-2847553 Msa0663920:CDS
GACGAGTCTACGTCTTACTT+TGG 0.533796 4_4:-2849634 Msa0663920:CDS
AGTGAGAGAATTTCAGACTC+AGG 0.534734 4_4:-2843649 Msa0663920:three_prime_UTR
TCAGCTTCAGACTGTTGTGC+CGG 0.534919 4_4:+2843698 None:intergenic
ATGAGCATCAACAAACTGGT+TGG 0.536510 4_4:+2843212 None:intergenic
TGCCAAGTTTCTACACCAGC+AGG 0.538545 4_4:-2848485 Msa0663920:CDS
CTTCATGCCTAAGCACCTGC+TGG 0.539299 4_4:+2848470 None:intergenic
CTGGTGTAGACACAGTTACA+TGG 0.540136 4_4:-2843416 Msa0663920:three_prime_UTR
TTCTTGTGATAGCTTGTGAT+GGG 0.540977 4_4:-2844173 Msa0663920:CDS
AGAAGCACGCCAACCCTGCA+TGG 0.542450 4_4:+2850547 None:intergenic
GGACCCCATTCTGATTTCAG+TGG 0.543541 4_4:-2846238 Msa0663920:CDS
ATACTTACTGAAGTTACGTC+AGG 0.548117 4_4:+2844874 None:intergenic
TTGGCCCACTGAAATCAGAA+TGG 0.549848 4_4:+2846233 None:intergenic
AGTTGTCTGGTATGCTTGAG+GGG 0.553384 4_4:-2847571 Msa0663920:CDS
GCTTCAGACTGTTGTGCCGG+AGG 0.559144 4_4:+2843701 None:intergenic
GTTTGTCTTCCATGCAGGGT+TGG 0.561122 4_4:-2850556 Msa0663920:CDS
TGCAATGTTATGGAAATGAC+AGG 0.561135 4_4:-2843265 Msa0663920:three_prime_UTR
CCAATGAACGTGCCGATGAG+TGG 0.561661 4_4:-2847520 Msa0663920:CDS
CTGTGGAAGCACGGCGTGTG+TGG 0.562361 4_4:-2846209 Msa0663920:CDS
AAAGACAGGATTCTAAAAGC+TGG 0.564183 4_4:-2845161 Msa0663920:CDS
GTGGGTTGAGCAGATGACTC+AGG 0.565003 4_4:+2843731 None:intergenic
GCAGGAGAATAAACTTTCTG+TGG 0.566825 4_4:-2843879 Msa0663920:intron
GACCCCATTCTGATTTCAGT+GGG 0.567392 4_4:-2846237 Msa0663920:CDS
TTCTACACCAGCAGGTGCTT+AGG 0.567651 4_4:-2848477 Msa0663920:CDS
CAATGAACGTGCCGATGAGT+GGG 0.569384 4_4:-2847519 Msa0663920:CDS
TGGGCCAAACTGTGGAAGCA+CGG 0.570368 4_4:-2846218 Msa0663920:CDS
GCTGGCGGTTTCATCCAAGT+TGG 0.572732 4_4:-2845143 Msa0663920:CDS
CATGTCCAGCCAGCAGCTTG+TGG 0.574080 4_4:-2844043 Msa0663920:CDS
GAGAATGGCATGCTTCGCTA+TGG 0.575346 4_4:-2850578 Msa0663920:CDS
GAAAGATTTCTGTAAAGATG+TGG 0.576727 4_4:+2848426 None:intergenic
AGATCACAAGCCTGATCTTG+AGG 0.579838 4_4:-2845189 Msa0663920:CDS
TGTGTTATCAAGGAAAGGCC+AGG 0.580463 4_4:-2846134 Msa0663920:intron
GAAAGTATTCGATAGGTGCT+TGG 0.581025 4_4:-2843849 Msa0663920:CDS
TATTGGGTCTTTGAAACTGG+AGG 0.581950 4_4:+2847097 None:intergenic
GAATTTCAGACTCAGGCAGA+TGG 0.583384 4_4:-2843642 Msa0663920:three_prime_UTR
TCTTTGAAACTGGAGGGTGA+TGG 0.583417 4_4:+2847104 None:intergenic
GATTTCAGTGGGCCAAACTG+TGG 0.583636 4_4:-2846226 Msa0663920:CDS
GCACCAACAGCTGGTGGTGA+GGG 0.586108 4_4:-2843827 Msa0663920:CDS
AGATGTGTGTTATCAAGGAA+AGG 0.590073 4_4:-2846139 Msa0663920:CDS
TTTGTGAGAAAGTATTCGAT+AGG 0.592208 4_4:-2843856 Msa0663920:CDS
CTCCTCAAAAGCCCACTCAT+CGG 0.592455 4_4:+2847508 None:intergenic
TGACAAACTGCTAGTTCATG+GGG 0.595401 4_4:-2843505 Msa0663920:three_prime_UTR
GTTGAGCAGATGACTCAGGC+TGG 0.596134 4_4:+2843735 None:intergenic
GCATGTTGAAGCACTAGTGA+GGG 0.596670 4_4:-2843603 Msa0663920:three_prime_UTR
TCAACCCACTCCTAATCCTC+CGG 0.600880 4_4:-2843717 Msa0663920:CDS
AGATGATGCGCGGACAAAGA+GGG 0.600892 4_4:-2847631 Msa0663920:CDS
TCATTGGCTTCACTACTCCT+GGG 0.601101 4_4:+2847536 None:intergenic
GCCATTCTCACCATCTTCAG+AGG 0.602250 4_4:+2850592 None:intergenic
CATCCCTCACCACCAGCTGT+TGG 0.612632 4_4:+2843824 None:intergenic
GAGATGATGCGCGGACAAAG+AGG 0.613113 4_4:-2847632 Msa0663920:CDS
GCGTGTGTGGCTGTCATCAG+AGG 0.615352 4_4:-2846196 Msa0663920:CDS
GACAGGATTCTAAAAGCTGG+CGG 0.616190 4_4:-2845158 Msa0663920:CDS
TGTGATTGCAGTTTGAGATG+GGG 0.619195 4_4:-2850646 Msa0663920:intron
TATACATGGCCAGTTAAAGA+CGG 0.619290 4_4:-2844016 Msa0663920:intron
GTTTCAAAGACCCAATATTG+CGG 0.627599 4_4:-2847091 Msa0663920:CDS
AGACAAGATACCAACCTCCA+TGG 0.629346 4_4:+2849599 None:intergenic
TCAAGTTGACGTGTCAACAA+TGG 0.631528 4_4:+2843025 None:intergenic
ATTGGGTCTTTGAAACTGGA+GGG 0.636434 4_4:+2847098 None:intergenic
TTGTGCCGGAGGATTAGGAG+TGG 0.636821 4_4:+2843712 None:intergenic
GAGTACTCCGAAAACAGAGA+AGG 0.639241 4_4:-2850615 Msa0663920:CDS
AGTTCAGAATTGCTGGACCA+AGG 0.641862 4_4:-2847050 Msa0663920:intron
GGAAGTCGATGTCTCAACAA+TGG 0.649265 4_4:+2842898 None:intergenic
TGATGCGCGGACAAAGAGGG+TGG 0.654390 4_4:-2847628 Msa0663920:CDS
ACAGAAGCATCTGAAGTCAG+AGG 0.654811 4_4:+2843764 None:intergenic
TAGAATCTGAAATATGACAA+TGG 0.657366 4_4:-2843104 Msa0663920:three_prime_UTR
TGCATGTTGAAGCACTAGTG+AGG 0.659778 4_4:-2843604 Msa0663920:three_prime_UTR
AATCACAATTAAATAGACCA+AGG 0.662173 4_4:+2842877 None:intergenic
AAAGTTGTCTGGTATGCTTG+AGG 0.662387 4_4:-2847573 Msa0663920:CDS
GGTGTTTATGATGGCCATGG+AGG 0.663870 4_4:-2849613 Msa0663920:intron
AGCATCAACAAACTGGTTGG+GGG 0.670249 4_4:+2843215 None:intergenic
TTGACGTGTCAACAATGGTG+AGG 0.677465 4_4:+2843030 None:intergenic
TCGATGTCTCAACAATGGTG+AGG 0.684595 4_4:+2842903 None:intergenic
TGTGCCGGAGGATTAGGAGT+GGG 0.688253 4_4:+2843713 None:intergenic
GTTGAAGCACTAGTGAGGGG+AGG 0.689214 4_4:-2843599 Msa0663920:three_prime_UTR
TGCTTGGCACCAACAGCTGG+TGG 0.691349 4_4:-2843833 Msa0663920:CDS
CATGTTGAAGCACTAGTGAG+GGG 0.695207 4_4:-2843602 Msa0663920:three_prime_UTR
AGAATGGATGAGATGATGCG+CGG 0.696418 4_4:-2847641 Msa0663920:CDS
GGCCCACTGAAATCAGAATG+GGG 0.698325 4_4:+2846235 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAAAATAGAAGAAATTA+GGG + chr4_4:2842945-2842964 None:intergenic 10.0%
!!! ACTAGATTTTATATAATAAT+GGG + chr4_4:2844785-2844804 None:intergenic 10.0%
!!! TACTAGATTTTATATAATAA+TGG + chr4_4:2844786-2844805 None:intergenic 10.0%
!!! TTTCTTTGTAATTATATTTT+TGG - chr4_4:2845278-2845297 Msa0663920:intron 10.0%
!! ATTTGAGTAAAAAAAAAAAT+AGG + chr4_4:2846435-2846454 None:intergenic 10.0%
!! ATAATAAAGAACAATATTTA+AGG - chr4_4:2846471-2846490 Msa0663920:intron 10.0%
!! TAATAAAGAACAATATTTAA+GGG - chr4_4:2846472-2846491 Msa0663920:intron 10.0%
!! ATTAATATTATCATTTACAA+TGG + chr4_4:2847710-2847729 None:intergenic 10.0%
!!! TTGAAATTATTCTTTTTTAA+GGG - chr4_4:2850004-2850023 Msa0663920:intron 10.0%
!!! ATTTTAATTAAAAACATGTT+TGG + chr4_4:2850075-2850094 None:intergenic 10.0%
!!! ATTTTAGTTAAATATATGTT+TGG + chr4_4:2850130-2850149 None:intergenic 10.0%
!! GTAATAAAATAGAAGAAATT+AGG + chr4_4:2842946-2842965 None:intergenic 15.0%
!!! TATTTTATTGATGAGAAAAT+TGG - chr4_4:2843179-2843198 Msa0663920:three_prime_UTR 15.0%
!!! TAGTTATTATTTCTAAACAA+TGG - chr4_4:2843258-2843277 Msa0663920:three_prime_UTR 15.0%
!! TTAAATTAATTATATTGCAC+TGG - chr4_4:2845009-2845028 Msa0663920:intron 15.0%
!! TAAATTAATTATATTGCACT+GGG - chr4_4:2845010-2845029 Msa0663920:intron 15.0%
!! TGTAAATGATGAAAATATAT+TGG + chr4_4:2845325-2845344 None:intergenic 15.0%
!! AAGTTATAAATAATCTAAAC+TGG - chr4_4:2845609-2845628 Msa0663920:intron 15.0%
!! AGTTATAAATAATCTAAACT+GGG - chr4_4:2845610-2845629 Msa0663920:intron 15.0%
!! AAATGAATCTAAGAAAAAAT+AGG + chr4_4:2845636-2845655 None:intergenic 15.0%
!!! TATTTTTTCTTAGATTCATT+TGG - chr4_4:2845635-2845654 Msa0663920:intron 15.0%
!! TAAAACTAGATGTTAAATAT+TGG + chr4_4:2845946-2845965 None:intergenic 15.0%
!!! TAGTTTTATATTTGTCAATA+TGG - chr4_4:2845958-2845977 Msa0663920:intron 15.0%
!! AATAAAGAACAATATTTAAG+GGG - chr4_4:2846473-2846492 Msa0663920:intron 15.0%
!!! GAAAAGTATATACATAAAAA+GGG + chr4_4:2846830-2846849 None:intergenic 15.0%
!!! AGAAAAGTATATACATAAAA+AGG + chr4_4:2846831-2846850 None:intergenic 15.0%
!! ATAATTTGACATAAAGAAAA+TGG + chr4_4:2847877-2847896 None:intergenic 15.0%
!!! TGATAAAAAATTATTTCTGT+TGG - chr4_4:2849724-2849743 Msa0663920:intron 15.0%
!! ATAACTTGATTTATACTATT+TGG - chr4_4:2849754-2849773 Msa0663920:intron 15.0%
!! TAACTTGATTTATACTATTT+GGG - chr4_4:2849755-2849774 Msa0663920:intron 15.0%
!!! CAAGTTTTAACATAAATTTA+TGG + chr4_4:2849987-2850006 None:intergenic 15.0%
!!! CTTGAAATTATTCTTTTTTA+AGG - chr4_4:2850003-2850022 Msa0663920:intron 15.0%
!!! TTATGTTTTCTGTTTCATTT+TGG - chr4_4:2843133-2843152 Msa0663920:three_prime_UTR 20.0%
!! ATTTCTAATAAATGCTTGTT+TGG + chr4_4:2843759-2843778 None:intergenic 20.0%
!!! TTATTCTGAAAAAGTAAAGT+GGG - chr4_4:2844137-2844156 Msa0663920:intron 20.0%
!! TGATATATATGTCAATCTAT+AGG + chr4_4:2844373-2844392 None:intergenic 20.0%
!! TTGATTAAGAATGTTGTAAA+TGG - chr4_4:2844425-2844444 Msa0663920:intron 20.0%
!! ATCATTAATATACTACAATG+AGG - chr4_4:2844497-2844516 Msa0663920:intron 20.0%
!! TTATTTATTACTCAGAAAAC+CGG - chr4_4:2845076-2845095 Msa0663920:intron 20.0%
!! ATGAAAATATATTGGATTCT+TGG + chr4_4:2845317-2845336 None:intergenic 20.0%
!! AACTCTCTTATAAGTTTATT+AGG + chr4_4:2845542-2845561 None:intergenic 20.0%
!! ATTGCAAACAAAAATTCTAT+GGG + chr4_4:2845714-2845733 None:intergenic 20.0%
!! TATTGCAAACAAAAATTCTA+TGG + chr4_4:2845715-2845734 None:intergenic 20.0%
!! AAAATGAAGACACATAAAAA+AGG + chr4_4:2846405-2846424 None:intergenic 20.0%
!!! TTTTTATGTGTCTTCATTTT+CGG - chr4_4:2846405-2846424 Msa0663920:intron 20.0%
!! CTTATATTTATTTACCTTCA+TGG - chr4_4:2846716-2846735 Msa0663920:intron 20.0%
!! CATATATTAATCTCCATAAT+AGG + chr4_4:2846780-2846799 None:intergenic 20.0%
!! CTATTATGGAGATTAATATA+TGG - chr4_4:2846778-2846797 Msa0663920:intron 20.0%
!!! TACATAAAAAGGGTATAATT+TGG + chr4_4:2846820-2846839 None:intergenic 20.0%
!!! ATATACTTTTCTTCATATTG+AGG - chr4_4:2846839-2846858 Msa0663920:intron 20.0%
!! ATATTATCATTTACAATGGT+GGG + chr4_4:2847706-2847725 None:intergenic 20.0%
!! AATATTATCATTTACAATGG+TGG + chr4_4:2847707-2847726 None:intergenic 20.0%
!!! ATTTCTTTTGGTGTTTATAA+TGG - chr4_4:2847750-2847769 Msa0663920:intron 20.0%
!! TTGTAATCACTTAATCATAA+AGG + chr4_4:2848143-2848162 None:intergenic 20.0%
!! AAATAAAACCTTATACAGTA+GGG + chr4_4:2848215-2848234 None:intergenic 20.0%
!! AAAATAAAACCTTATACAGT+AGG + chr4_4:2848216-2848235 None:intergenic 20.0%
!! AAGTGTTATATTGTGAATTA+GGG - chr4_4:2848245-2848264 Msa0663920:intron 20.0%
!! AGTATAGACCTTTATATTAA+AGG - chr4_4:2848447-2848466 Msa0663920:CDS 20.0%
!! AAAGGATTTGTCATTATTTA+TGG - chr4_4:2848777-2848796 Msa0663920:intron 20.0%
!!! TGTTTGCTTAAATTTTTAGA+AGG - chr4_4:2849850-2849869 Msa0663920:intron 20.0%
!!! GTTTGCTTAAATTTTTAGAA+GGG - chr4_4:2849851-2849870 Msa0663920:intron 20.0%
!!! TTTGCTTAAATTTTTAGAAG+GGG - chr4_4:2849852-2849871 Msa0663920:intron 20.0%
!!! TAGTTTTGTCAATGTAATAA+TGG + chr4_4:2849963-2849982 None:intergenic 20.0%
!!! TTATTTTATTTATGTGCGAT+AGG - chr4_4:2850284-2850303 Msa0663920:intron 20.0%
!!! TTACAACCAGATTTTATAAT+TGG + chr4_4:2850582-2850601 None:intergenic 20.0%
!!! TAAGAAACTTCTAAAAATTG+TGG + chr4_4:2851210-2851229 None:intergenic 20.0%
!! TTAGAAGTTTCTTAAGAATT+CGG - chr4_4:2851216-2851235 Msa0663920:intron 20.0%
!! TTAATTCAAAATCAAGATTG+AGG + chr4_4:2851538-2851557 None:intergenic 20.0%
! ACTACCATATATATTCTTCT+AGG + chr4_4:2843242-2843261 None:intergenic 25.0%
!! CTGTAACTATTCTTTTCTTT+TGG - chr4_4:2843990-2844009 Msa0663920:intron 25.0%
!! GTTATTCTGAAAAAGTAAAG+TGG - chr4_4:2844136-2844155 Msa0663920:intron 25.0%
!!! TAGTGTTGAGAAATTCTTTT+TGG - chr4_4:2844691-2844710 Msa0663920:intron 25.0%
! TATTTATTACTCAGAAAACC+GGG - chr4_4:2845077-2845096 Msa0663920:intron 25.0%
! TATCAAACATTTAAATCACC+CGG + chr4_4:2845098-2845117 None:intergenic 25.0%
! TTACAAAAACAAACTCCTAT+AGG - chr4_4:2845340-2845359 Msa0663920:intron 25.0%
! AAATGAATCAAGAAGCTAAA+TGG - chr4_4:2845436-2845455 Msa0663920:intron 25.0%
! TCTCTTATAAGTTTATTAGG+TGG + chr4_4:2845539-2845558 None:intergenic 25.0%
!! CATTGATTATAATTCACTTG+AGG - chr4_4:2845852-2845871 Msa0663920:intron 25.0%
! ATCATTTCAAAGTATAGTGA+TGG - chr4_4:2845906-2845925 Msa0663920:intron 25.0%
! TCATTTCAAAGTATAGTGAT+GGG - chr4_4:2845907-2845926 Msa0663920:intron 25.0%
! ACAAGAAACAAAATTACCTT+AGG + chr4_4:2846103-2846122 None:intergenic 25.0%
! AAGATAAATGAAAGTTCAGA+AGG + chr4_4:2846126-2846145 None:intergenic 25.0%
! TGAACTTTCATTTATCTTAC+TGG - chr4_4:2846128-2846147 Msa0663920:intron 25.0%
! GAACTTTCATTTATCTTACT+GGG - chr4_4:2846129-2846148 Msa0663920:intron 25.0%
!! TAATTTGTATCTAAGAGACA+AGG + chr4_4:2846291-2846310 None:intergenic 25.0%
!! TTTTATGTGTCTTCATTTTC+GGG - chr4_4:2846406-2846425 Msa0663920:intron 25.0%
! TGGTTTATGATAGAACTTTA+TGG + chr4_4:2846570-2846589 None:intergenic 25.0%
!! TTATAAGTTGGATCGAAATA+TGG + chr4_4:2846590-2846609 None:intergenic 25.0%
! ATATTTCGATCCAACTTATA+AGG - chr4_4:2846589-2846608 Msa0663920:intron 25.0%
! TATTTCGATCCAACTTATAA+GGG - chr4_4:2846590-2846609 Msa0663920:intron 25.0%
! ATCTTAAATCCCTTATAAGT+TGG + chr4_4:2846602-2846621 None:intergenic 25.0%
! TTTAAAGATCTGACCTATTA+TGG - chr4_4:2846764-2846783 Msa0663920:intron 25.0%
! AGCTACTGAAAAATATTGTT+TGG + chr4_4:2847165-2847184 None:intergenic 25.0%
! TATTCTTCCTTGATTTAGAA+TGG - chr4_4:2847357-2847376 Msa0663920:intron 25.0%
! ATCATGAGTTTACAATTCTA+GGG + chr4_4:2847605-2847624 None:intergenic 25.0%
! AATCATGAGTTTACAATTCT+AGG + chr4_4:2847606-2847625 None:intergenic 25.0%
! TATTATCATTTACAATGGTG+GGG + chr4_4:2847705-2847724 None:intergenic 25.0%
!!! CACATTATTGTTATTTGACA+AGG + chr4_4:2847822-2847841 None:intergenic 25.0%
! ACCTTAATTAAAAGTCAACT+CGG - chr4_4:2848082-2848101 Msa0663920:intron 25.0%
!! TGATTACAAGTACACATTTT+AGG - chr4_4:2848154-2848173 Msa0663920:intron 25.0%
!! GATTACAAGTACACATTTTA+GGG - chr4_4:2848155-2848174 Msa0663920:intron 25.0%
!!! TAAGGTTTTATTTTGAACTG+AGG - chr4_4:2848222-2848241 Msa0663920:intron 25.0%
!! GAAGTGTTATATTGTGAATT+AGG - chr4_4:2848244-2848263 Msa0663920:intron 25.0%
!! CAATCTTCTCTAATTTTAGA+AGG - chr4_4:2848419-2848438 Msa0663920:intron 25.0%
!! ACGGTACTTTAAAAAATACA+TGG - chr4_4:2848987-2849006 Msa0663920:intron 25.0%
!! CGGTACTTTAAAAAATACAT+GGG - chr4_4:2848988-2849007 Msa0663920:intron 25.0%
!! ACTTTAAAAAATACATGGGA+TGG - chr4_4:2848992-2849011 Msa0663920:intron 25.0%
!! CTTTAAAAAATACATGGGAT+GGG - chr4_4:2848993-2849012 Msa0663920:intron 25.0%
! AAATTATGAAATTCACGACA+GGG + chr4_4:2849188-2849207 None:intergenic 25.0%
! TAAATTATGAAATTCACGAC+AGG + chr4_4:2849189-2849208 None:intergenic 25.0%
! GCAGTATAACTTCATTAAAT+AGG + chr4_4:2849276-2849295 None:intergenic 25.0%
! ATTTAATGAAGTTATACTGC+AGG - chr4_4:2849276-2849295 Msa0663920:intron 25.0%
!!! AGCAATTGGTAATTTTTTCT+GGG - chr4_4:2849414-2849433 Msa0663920:intron 25.0%
! CAAAGAAAAATGTATGCATT+TGG - chr4_4:2849454-2849473 Msa0663920:intron 25.0%
! CAATATAGCAAATAAAACAG+AGG + chr4_4:2849706-2849725 None:intergenic 25.0%
!!! ATTCTTTTTTAAGGGCAAAA+AGG - chr4_4:2850012-2850031 Msa0663920:intron 25.0%
!! TATATGTTTGGTTCAAAAGA+GGG + chr4_4:2850118-2850137 None:intergenic 25.0%
!! ATATATGTTTGGTTCAAAAG+AGG + chr4_4:2850119-2850138 None:intergenic 25.0%
! AATAGAGAACAAAACTATCA+AGG + chr4_4:2850236-2850255 None:intergenic 25.0%
! AATAAATTCAAATTAGAGCG+AGG + chr4_4:2850261-2850280 None:intergenic 25.0%
! CTGAGAATACAGAATAAAAA+GGG + chr4_4:2850391-2850410 None:intergenic 25.0%
! ACTGAGAATACAGAATAAAA+AGG + chr4_4:2850392-2850411 None:intergenic 25.0%
! TATAACTTCTTTATGTGTCT+AGG - chr4_4:2850433-2850452 Msa0663920:intron 25.0%
! ATAACTTCTTTATGTGTCTA+GGG - chr4_4:2850434-2850453 Msa0663920:intron 25.0%
! AAATTTACAATCCTCTATTG+AGG + chr4_4:2850978-2850997 None:intergenic 25.0%
!!! GGATGTTTAAAAGACTTTTT+TGG - chr4_4:2851109-2851128 Msa0663920:intron 25.0%
!!! GATTATTAGTTTTTCTCTCA+TGG - chr4_4:2851317-2851336 Msa0663920:intron 25.0%
!! TAGAATCTGAAATATGACAA+TGG - chr4_4:2851400-2851419 Msa0663920:intron 25.0%
! AATCACAATTAAATAGACCA+AGG + chr4_4:2851630-2851649 None:intergenic 25.0%
GAAACAGAAAACATAACAGA+TGG + chr4_4:2843129-2843148 None:intergenic 30.0%
ACGACCTAGAAGAATATATA+TGG - chr4_4:2843235-2843254 Msa0663920:three_prime_UTR 30.0%
GGTTATAAATTCGACTTATG+TGG - chr4_4:2843279-2843298 Msa0663920:three_prime_UTR 30.0%
!!! GACTTTTTTTGTTTCCTTTC+TGG - chr4_4:2843368-2843387 Msa0663920:three_prime_UTR 30.0%
TTCTATCTCAAGCTAGAAAT+TGG + chr4_4:2843568-2843587 None:intergenic 30.0%
TACATTGAATCGTGTATGTT+TGG + chr4_4:2843692-2843711 None:intergenic 30.0%
AGAATAACTTCCCACATAAA+CGG + chr4_4:2844124-2844143 None:intergenic 30.0%
ATCTTTGCGTTGTTAAATAG+TGG - chr4_4:2844193-2844212 Msa0663920:CDS 30.0%
TTGTACTAAACAGTGTATTG+TGG + chr4_4:2844247-2844266 None:intergenic 30.0%
ACACTGTTTAGTACAAAATG+TGG - chr4_4:2844251-2844270 Msa0663920:intron 30.0%
!! TCTTACTTTGGTGTTTATGA+TGG - chr4_4:2844882-2844901 Msa0663920:CDS 30.0%
ATTTGAAAATGAGCATGGAT+GGG + chr4_4:2844956-2844975 None:intergenic 30.0%
TATTTGAAAATGAGCATGGA+TGG + chr4_4:2844957-2844976 None:intergenic 30.0%
! CTCATTTTCAAATACAGCAA+GGG - chr4_4:2844963-2844982 Msa0663920:intron 30.0%
GCACTTGTAAACTGTTAATA+AGG - chr4_4:2845050-2845069 Msa0663920:intron 30.0%
GCTAAAAATGTCAAACCTAT+AGG + chr4_4:2845358-2845377 None:intergenic 30.0%
ATGAGACCTTTCAAAAAAGT+CGG + chr4_4:2845501-2845520 None:intergenic 30.0%
! TTCTTAGATTCATTTGGAGT+TGG - chr4_4:2845641-2845660 Msa0663920:intron 30.0%
!! ATCAATGCTTAGTCTTGAAT+GGG + chr4_4:2845839-2845858 None:intergenic 30.0%
!! AATCAATGCTTAGTCTTGAA+TGG + chr4_4:2845840-2845859 None:intergenic 30.0%
CATTTCAAAGTATAGTGATG+GGG - chr4_4:2845908-2845927 Msa0663920:intron 30.0%
GAAAGATTTCTGTAAAGATG+TGG + chr4_4:2846081-2846100 None:intergenic 30.0%
CTTTACAGAAATCTTTCCTA+AGG - chr4_4:2846084-2846103 Msa0663920:intron 30.0%
! CACAAAATATTTTACCACCA+GGG - chr4_4:2846253-2846272 Msa0663920:intron 30.0%
! ACAAAATATTTTACCACCAG+GGG - chr4_4:2846254-2846273 Msa0663920:intron 30.0%
TCTCTTAGATACAAATTACC+CGG - chr4_4:2846293-2846312 Msa0663920:intron 30.0%
AAATTCTAACTCGAGCAATA+GGG + chr4_4:2846380-2846399 None:intergenic 30.0%
TAAATTCTAACTCGAGCAAT+AGG + chr4_4:2846381-2846400 None:intergenic 30.0%
GTTAACATCATTTGCACATT+TGG - chr4_4:2846738-2846757 Msa0663920:intron 30.0%
GATAAAATGGAAAAGTTGTC+TGG - chr4_4:2846920-2846939 Msa0663920:intron 30.0%
TAAGTTAGAAAAACAAGCAG+AGG + chr4_4:2847057-2847076 None:intergenic 30.0%
!! GTTATCTATTGGTGTTGAAT+GGG - chr4_4:2847102-2847121 Msa0663920:CDS 30.0%
! ATATGCATAATTTTCGTTGC+TGG - chr4_4:2847127-2847146 Msa0663920:intron 30.0%
TGGAAATAGATCTGATATTG+GGG + chr4_4:2847333-2847352 None:intergenic 30.0%
CTGGAAATAGATCTGATATT+GGG + chr4_4:2847334-2847353 None:intergenic 30.0%
ACGATTTCCATTCTAAATCA+AGG + chr4_4:2847367-2847386 None:intergenic 30.0%
!! GTGTACTATGTCATTTCTTT+TGG - chr4_4:2847738-2847757 Msa0663920:intron 30.0%
AGGTGAGTAACATATAAAAC+TGG + chr4_4:2847786-2847805 None:intergenic 30.0%
ATTTAGCTGTGCAAATTGTA+AGG - chr4_4:2847967-2847986 Msa0663920:intron 30.0%
TTCAGAAAACACGTGAAATA+AGG + chr4_4:2848005-2848024 None:intergenic 30.0%
TTCTGAATTGTCTACATTCA+CGG - chr4_4:2848018-2848037 Msa0663920:intron 30.0%
!! TCCGAGTTGACTTTTAATTA+AGG + chr4_4:2848086-2848105 None:intergenic 30.0%
ATTCTAGATGTGTGTTATCA+AGG - chr4_4:2848360-2848379 Msa0663920:intron 30.0%
ATTGACAACATAGGCATATA+TGG + chr4_4:2848618-2848637 None:intergenic 30.0%
AAATGGTGAATTGACAACAT+AGG + chr4_4:2848627-2848646 None:intergenic 30.0%
!!! GACTTTTTTGTCCTCAAATT+TGG + chr4_4:2848749-2848768 None:intergenic 30.0%
CAAAAAAGTCGAAGAAAGAA+AGG - chr4_4:2848759-2848778 Msa0663920:intron 30.0%
AAAACAAAGATATTTGTCGC+TGG + chr4_4:2848818-2848837 None:intergenic 30.0%
TGTTTATATTGCTGCAGATT+GGG + chr4_4:2848948-2848967 None:intergenic 30.0%
ATGTTTATATTGCTGCAGAT+TGG + chr4_4:2848949-2848968 None:intergenic 30.0%
TCAAGGCAACATAAAAAACA+CGG - chr4_4:2848968-2848987 Msa0663920:intron 30.0%
AGTCAATGGAAGTTTGAATT+TGG - chr4_4:2849387-2849406 Msa0663920:intron 30.0%
!!! GAGCAATTGGTAATTTTTTC+TGG - chr4_4:2849413-2849432 Msa0663920:intron 30.0%
TATATCACAAACACTTGCAA+CGG + chr4_4:2849530-2849549 None:intergenic 30.0%
TATAGTTCTCTTTCTATCAC+AGG - chr4_4:2849546-2849565 Msa0663920:intron 30.0%
ACCAAAAAACTCAAACCAAA+CGG + chr4_4:2849794-2849813 None:intergenic 30.0%
!!! TTTGGTTTGAGTTTTTTGGT+GGG - chr4_4:2849794-2849813 Msa0663920:intron 30.0%
!! CTTAAATTTTTAGAAGGGGA+GGG - chr4_4:2849856-2849875 Msa0663920:intron 30.0%
!! TTAAATTTTTAGAAGGGGAG+GGG - chr4_4:2849857-2849876 Msa0663920:intron 30.0%
AAGCAATAAATGTGTCTATG+AGG + chr4_4:2849892-2849911 None:intergenic 30.0%
! AAAACATGTTTGGTTCACAA+GGG + chr4_4:2850065-2850084 None:intergenic 30.0%
! AAAAACATGTTTGGTTCACA+AGG + chr4_4:2850066-2850085 None:intergenic 30.0%
ATGGCTCCAATTATAAAATC+TGG - chr4_4:2850573-2850592 Msa0663920:CDS 30.0%
ACATCAAATCATGATTATGC+AGG - chr4_4:2850607-2850626 Msa0663920:CDS 30.0%
!! TTTGTGAGAAAGTATTCGAT+AGG - chr4_4:2850648-2850667 Msa0663920:intron 30.0%
TTTGAACTGAATCAAGATCA+TGG + chr4_4:2850717-2850736 None:intergenic 30.0%
GTTAACAATCATGTTGTCAT+TGG + chr4_4:2851142-2851161 None:intergenic 30.0%
! TTGCTTGTTAATTTACTGCT+TGG - chr4_4:2851349-2851368 Msa0663920:intron 30.0%
TAGAAGAAATTAGGGTTCGA+TGG + chr4_4:2842937-2842956 None:intergenic 35.0%
CGATATAACTCATTCCAGAA+AGG + chr4_4:2843385-2843404 None:intergenic 35.0%
GGAATGAGTTATATCGTGAT+TGG - chr4_4:2843389-2843408 Msa0663920:three_prime_UTR 35.0%
TACGACTAAAATTGAGCTGA+AGG - chr4_4:2843485-2843504 Msa0663920:three_prime_UTR 35.0%
! AATTTTGTCTGCTCCAAAAG+TGG - chr4_4:2843664-2843683 Msa0663920:exon 35.0%
!! TGTATGTTTGGTTCCACTTT+TGG + chr4_4:2843680-2843699 None:intergenic 35.0%
TGAACTCAAACACACATTTG+AGG - chr4_4:2843717-2843736 Msa0663920:CDS 35.0%
! CACATTTGAGGTCTATCTAA+TGG - chr4_4:2843729-2843748 Msa0663920:CDS 35.0%
CAATCACATCAAATCAGTGA+AGG + chr4_4:2843796-2843815 None:intergenic 35.0%
! GTGATTTTGTGATTCAGTGT+TGG - chr4_4:2843823-2843842 Msa0663920:CDS 35.0%
! TTGTGATTGCAGTTTGAGAT+GGG - chr4_4:2843857-2843876 Msa0663920:CDS 35.0%
! GCTTGTTAATCACGGTTATT+TGG - chr4_4:2844098-2844117 Msa0663920:intron 35.0%
!! AAGTAAAGTGGGTTTGTTAG+TGG - chr4_4:2844148-2844167 Msa0663920:intron 35.0%
ATAGTGGTACTATAGCAAAG+CGG - chr4_4:2844209-2844228 Msa0663920:intron 35.0%
! TGGTCAAATAGTGTTGCTAT+AGG - chr4_4:2844271-2844290 Msa0663920:intron 35.0%
! TACTACAACGAGAAGCATAA+AGG - chr4_4:2844560-2844579 Msa0663920:intron 35.0%
GAATTTCTCAACACTAGAAG+AGG + chr4_4:2844687-2844706 None:intergenic 35.0%
TGATACAGATGCTTCATGTT+TGG - chr4_4:2844734-2844753 Msa0663920:intron 35.0%
GCTGTATTTGAAAATGAGCA+TGG + chr4_4:2844961-2844980 None:intergenic 35.0%
! GCTCATTTTCAAATACAGCA+AGG - chr4_4:2844962-2844981 Msa0663920:intron 35.0%
TGAGACCTTTCAAAAAAGTC+GGG + chr4_4:2845500-2845519 None:intergenic 35.0%
TTAGGTGGCTAAGAAAAAGT+TGG + chr4_4:2845524-2845543 None:intergenic 35.0%
! AGATTCATTTGGAGTTGGAT+AGG - chr4_4:2845646-2845665 Msa0663920:intron 35.0%
! AGTTGGATAGGAATGCTTTT+TGG - chr4_4:2845658-2845677 Msa0663920:intron 35.0%
TCATCTAGTAGCCATGTTAA+AGG - chr4_4:2845744-2845763 Msa0663920:intron 35.0%
CCAAAGTACACAGACAAAAA+AGG + chr4_4:2845789-2845808 None:intergenic 35.0%
!!! CCTTTTTTGTCTGTGTACTT+TGG - chr4_4:2845786-2845805 Msa0663920:intron 35.0%
! GCACAAAATATTTTACCACC+AGG - chr4_4:2846252-2846271 Msa0663920:intron 35.0%
AATTCTAACTCGAGCAATAG+GGG + chr4_4:2846379-2846398 None:intergenic 35.0%
! CTATGCATTTGAGGAGTTTT+AGG - chr4_4:2846631-2846650 Msa0663920:intron 35.0%
GCAAATGATGTTAACCATGA+AGG + chr4_4:2846733-2846752 None:intergenic 35.0%
TTCTTCATATTGAGGCAGAA+TGG - chr4_4:2846847-2846866 Msa0663920:intron 35.0%
GATGCATACTCGTTATCTAT+TGG - chr4_4:2847091-2847110 Msa0663920:CDS 35.0%
!! CGTTATCTATTGGTGTTGAA+TGG - chr4_4:2847101-2847120 Msa0663920:CDS 35.0%
ACGAGCAAAGTAACAACAAA+AGG + chr4_4:2847199-2847218 None:intergenic 35.0%
GGAAATAGATCTGATATTGG+GGG + chr4_4:2847332-2847351 None:intergenic 35.0%
CCTGGAAATAGATCTGATAT+TGG + chr4_4:2847335-2847354 None:intergenic 35.0%
CCAATATCAGATCTATTTCC+AGG - chr4_4:2847332-2847351 Msa0663920:intron 35.0%
AAATCAAGGAAGAATACTCC+TGG + chr4_4:2847353-2847372 None:intergenic 35.0%
!! CAATATTGGGTCTTTGAAAC+TGG + chr4_4:2847413-2847432 None:intergenic 35.0%
GTTTCAAAGACCCAATATTG+CGG - chr4_4:2847413-2847432 Msa0663920:intron 35.0%
TTTCAAAGACCCAATATTGC+GGG - chr4_4:2847414-2847433 Msa0663920:intron 35.0%
TATTGCAAGTTCAGAATTGC+TGG - chr4_4:2847447-2847466 Msa0663920:intron 35.0%
AGTCGTTTCTGCATAAATTC+AGG + chr4_4:2847555-2847574 None:intergenic 35.0%
ATGCAACAAGAAAATATCCG+TGG + chr4_4:2847657-2847676 None:intergenic 35.0%
!! TTTGGTGTTTATAATGGCAC+TGG - chr4_4:2847756-2847775 Msa0663920:intron 35.0%
! TTGGTGTTTATAATGGCACT+GGG - chr4_4:2847757-2847776 Msa0663920:intron 35.0%
!!! ACACATTTTAGGGTTTGATG+TGG - chr4_4:2848165-2848184 Msa0663920:intron 35.0%
! TTATACAGTAGGGTGTTCAA+AGG + chr4_4:2848205-2848224 None:intergenic 35.0%
TTTGAACACCCTACTGTATA+AGG - chr4_4:2848204-2848223 Msa0663920:intron 35.0%
!! AAACTTGTTGTTGCAAATGC+TGG - chr4_4:2848335-2848354 Msa0663920:intron 35.0%
AGATGTGTGTTATCAAGGAA+AGG - chr4_4:2848365-2848384 Msa0663920:intron 35.0%
GAAGATTGCAAAACTGAAAG+AGG + chr4_4:2848407-2848426 None:intergenic 35.0%
AGACCTTTATATTAAAGGCG+TGG - chr4_4:2848452-2848471 Msa0663920:CDS 35.0%
! GTTGTCAATTCACCATTTTG+CGG - chr4_4:2848629-2848648 Msa0663920:intron 35.0%
CTGCAGCAATATAAACATCA+AGG - chr4_4:2848951-2848970 Msa0663920:intron 35.0%
TCAAGCATAGTTGTCAATCT+TGG + chr4_4:2849098-2849117 None:intergenic 35.0%
! AAAGACAGGATTCTAAAAGC+TGG - chr4_4:2849343-2849362 Msa0663920:intron 35.0%
TTGAATTTGGCTAGAGCAAT+TGG - chr4_4:2849400-2849419 Msa0663920:intron 35.0%
ATATCACAAACACTTGCAAC+GGG + chr4_4:2849529-2849548 None:intergenic 35.0%
TCTTTCTATCACAGGAGATA+TGG - chr4_4:2849554-2849573 Msa0663920:intron 35.0%
ATACTTACTGAAGTTACGTC+AGG + chr4_4:2849633-2849652 None:intergenic 35.0%
! ATACTATTTGGGCATCGTTT+AGG - chr4_4:2849766-2849785 Msa0663920:intron 35.0%
! TACTATTTGGGCATCGTTTA+GGG - chr4_4:2849767-2849786 Msa0663920:intron 35.0%
!!! TCCGTTTGGTTTGAGTTTTT+TGG - chr4_4:2849790-2849809 Msa0663920:intron 35.0%
!!! GTTTGGTTTGAGTTTTTTGG+TGG - chr4_4:2849793-2849812 Msa0663920:intron 35.0%
!!! TTGGTTTGAGTTTTTTGGTG+GGG - chr4_4:2849795-2849814 Msa0663920:intron 35.0%
!! GCTTAAATTTTTAGAAGGGG+AGG - chr4_4:2849855-2849874 Msa0663920:intron 35.0%
ATTTATTGCTTCCCCCAAAT+TGG - chr4_4:2849901-2849920 Msa0663920:intron 35.0%
! AAACATGTTTGGTTCACAAG+GGG + chr4_4:2850064-2850083 None:intergenic 35.0%
! TTTCTTGTGATAGCTTGTGA+TGG - chr4_4:2850330-2850349 Msa0663920:intron 35.0%
! TTCTTGTGATAGCTTGTGAT+GGG - chr4_4:2850331-2850350 Msa0663920:intron 35.0%
TATACATGGCCAGTTAAAGA+CGG - chr4_4:2850488-2850507 Msa0663920:intron 35.0%
GAAAACTTACCGTCTTTAAC+TGG + chr4_4:2850500-2850519 None:intergenic 35.0%
GTCTATCTGTACAGTAAACA+AGG + chr4_4:2850531-2850550 None:intergenic 35.0%
TCTTGAATGTAGCATTCACA+TGG - chr4_4:2850554-2850573 Msa0663920:CDS 35.0%
! AACGACAAGAATCTGAAATC+TGG + chr4_4:2850952-2850971 None:intergenic 35.0%
TTGTCGTTAATCCTCAATAG+AGG - chr4_4:2850964-2850983 Msa0663920:intron 35.0%
! CTTGGTGACTTGAATATGAA+TGG - chr4_4:2851042-2851061 Msa0663920:intron 35.0%
!! AAGAATTCGGTGCAATGTTA+TGG - chr4_4:2851229-2851248 Msa0663920:intron 35.0%
TGCAATGTTATGGAAATGAC+AGG - chr4_4:2851239-2851258 Msa0663920:intron 35.0%
AATTGGAGATGATGCACTGT+CGG - chr4_4:2843196-2843215 Msa0663920:three_prime_UTR 40.0%
GTTGTGATTGCAGTTTGAGA+TGG - chr4_4:2843856-2843875 Msa0663920:CDS 40.0%
! TGTGATTGCAGTTTGAGATG+GGG - chr4_4:2843858-2843877 Msa0663920:CDS 40.0%
! TATGGTTTGTCTTCCATGCA+GGG - chr4_4:2843944-2843963 Msa0663920:intron 40.0%
! CTTTCAACAGCTACGCATTT+TGG - chr4_4:2844047-2844066 Msa0663920:CDS 40.0%
! CGTGTGATGCTTGTTAATCA+CGG - chr4_4:2844090-2844109 Msa0663920:intron 40.0%
GGTTATTTGGCCGTTTATGT+GGG - chr4_4:2844111-2844130 Msa0663920:intron 40.0%
CAGCTACACAACAGTGTTAT+AGG + chr4_4:2844297-2844316 None:intergenic 40.0%
! TACTACAATGAGGAGCATGA+AGG - chr4_4:2844507-2844526 Msa0663920:intron 40.0%
!! TTTGGTGTTTATGATGGCCA+TGG - chr4_4:2844888-2844907 Msa0663920:CDS 40.0%
TAGCACAGTATGTACTAGCT+TGG - chr4_4:2845374-2845393 Msa0663920:intron 40.0%
!!! TTCACCCCGACTTTTTTGAA+AGG - chr4_4:2845492-2845511 Msa0663920:intron 40.0%
GAGACCTTTCAAAAAAGTCG+GGG + chr4_4:2845499-2845518 None:intergenic 40.0%
TAAGAGAGTTTCCATACGTC+AGG - chr4_4:2845552-2845571 Msa0663920:intron 40.0%
! AGTAGTTGATTCCTGACGTA+TGG + chr4_4:2845566-2845585 None:intergenic 40.0%
TAGCCATGTTAAAGGAAGCT+GGG - chr4_4:2845752-2845771 Msa0663920:intron 40.0%
!! ATATGGCTTCACTGATTTGC+AGG - chr4_4:2845975-2845994 Msa0663920:intron 40.0%
AGGCATGAAGCTTATTTAGC+TGG - chr4_4:2846047-2846066 Msa0663920:intron 40.0%
AGTTTGACATGTAGTACCAC+AGG + chr4_4:2846229-2846248 None:intergenic 40.0%
CAAATTACCCGGAAACTAAG+TGG - chr4_4:2846304-2846323 Msa0663920:intron 40.0%
CAATAGGGGATATAGAGAGT+AGG + chr4_4:2846365-2846384 None:intergenic 40.0%
GACACATGTCTATGCATTTG+AGG - chr4_4:2846622-2846641 Msa0663920:intron 40.0%
AAAGTTGTCTGGTATGCTTG+AGG - chr4_4:2846931-2846950 Msa0663920:intron 40.0%
AAGTTGTCTGGTATGCTTGA+GGG - chr4_4:2846932-2846951 Msa0663920:intron 40.0%
GTATGCTTGAGGGGTTTATA+TGG - chr4_4:2846942-2846961 Msa0663920:intron 40.0%
!! TTTTGAGGAGGTAACCACTA+AGG - chr4_4:2847009-2847028 Msa0663920:intron 40.0%
GAACAAACTGTGTTCCTTAG+TGG + chr4_4:2847026-2847045 None:intergenic 40.0%
ATCCTTGGTTGAACTTCCAA+CGG + chr4_4:2847224-2847243 None:intergenic 40.0%
AGTCTTGAGTTTGACATCCT+TGG + chr4_4:2847239-2847258 None:intergenic 40.0%
AATAGATCTGATATTGGGGG+TGG + chr4_4:2847329-2847348 None:intergenic 40.0%
!! ATTGGGTCTTTGAAACTGGA+GGG + chr4_4:2847409-2847428 None:intergenic 40.0%
!! TATTGGGTCTTTGAAACTGG+AGG + chr4_4:2847410-2847429 None:intergenic 40.0%
TCTCATTAGCCCGCAATATT+GGG + chr4_4:2847426-2847445 None:intergenic 40.0%
TTCTCATTAGCCCGCAATAT+TGG + chr4_4:2847427-2847446 None:intergenic 40.0%
TGAGTAGACAAGCACAAACT+AGG + chr4_4:2847526-2847545 None:intergenic 40.0%
ACTCATAAGTTTGACCACCA+CGG - chr4_4:2847637-2847656 Msa0663920:CDS 40.0%
CAACAAGAAAATATCCGTGG+TGG + chr4_4:2847654-2847673 None:intergenic 40.0%
! TATCATTTACAATGGTGGGG+TGG + chr4_4:2847702-2847721 None:intergenic 40.0%
GACAAGGCATAACAGCAATA+AGG + chr4_4:2847806-2847825 None:intergenic 40.0%
!!! TTTTAGGGTTTGATGTGGAC+TGG - chr4_4:2848170-2848189 Msa0663920:intron 40.0%
TGCAAAACTGAAAGAGGATG+TGG + chr4_4:2848401-2848420 None:intergenic 40.0%
GCACCACGCCTTTAATATAA+AGG + chr4_4:2848458-2848477 None:intergenic 40.0%
TGCAGTTACATGATGCTGAA+GGG - chr4_4:2848493-2848512 Msa0663920:CDS 40.0%
TATAACCTTGCACATGCTTG+AGG - chr4_4:2848592-2848611 Msa0663920:intron 40.0%
!! TTTGTCCTCAAATTTGGTGC+AGG + chr4_4:2848743-2848762 None:intergenic 40.0%
TATGAAATTCACGACAGGGT+GGG + chr4_4:2849184-2849203 None:intergenic 40.0%
TTATGAAATTCACGACAGGG+TGG + chr4_4:2849185-2849204 None:intergenic 40.0%
TCTTTCTCAACCTCAAGATC+AGG + chr4_4:2849328-2849347 None:intergenic 40.0%
ATCTTGAGGTTGAGAAAGAC+AGG - chr4_4:2849329-2849348 Msa0663920:intron 40.0%
!!! TTTGAGTTTTTTGGTGGGGA+GGG - chr4_4:2849799-2849818 Msa0663920:intron 40.0%
TCCAGAAAACTCCAATTTGG+GGG + chr4_4:2849915-2849934 None:intergenic 40.0%
CTCCAGAAAACTCCAATTTG+GGG + chr4_4:2849916-2849935 None:intergenic 40.0%
CCTCCAGAAAACTCCAATTT+GGG + chr4_4:2849917-2849936 None:intergenic 40.0%
! CCAAATTGGAGTTTTCTGGA+GGG - chr4_4:2849915-2849934 Msa0663920:intron 40.0%
!! CAAATTGGAGTTTTCTGGAG+GGG - chr4_4:2849916-2849935 Msa0663920:intron 40.0%
! TTTGGTTCAAAAGAGGGAAG+GGG + chr4_4:2850112-2850131 None:intergenic 40.0%
! GTTTGGTTCAAAAGAGGGAA+GGG + chr4_4:2850113-2850132 None:intergenic 40.0%
! TGTTTGGTTCAAAAGAGGGA+AGG + chr4_4:2850114-2850133 None:intergenic 40.0%
! CAAGGAGCATATGACCTTTA+GGG + chr4_4:2850218-2850237 None:intergenic 40.0%
! TCAAGGAGCATATGACCTTT+AGG + chr4_4:2850219-2850238 None:intergenic 40.0%
! TGATAGCTTGTGATGGGATA+TGG - chr4_4:2850337-2850356 Msa0663920:intron 40.0%
CAGCTTGTGGACTTTATACA+TGG - chr4_4:2850474-2850493 Msa0663920:intron 40.0%
GCAGGAGAATAAACTTTCTG+TGG - chr4_4:2850625-2850644 Msa0663920:CDS 40.0%
!! GAAAGTATTCGATAGGTGCT+TGG - chr4_4:2850655-2850674 Msa0663920:intron 40.0%
AGTGAGAGAATTTCAGACTC+AGG - chr4_4:2850855-2850874 Msa0663920:intron 40.0%
TGTGACAAACTGCTAGTTCA+TGG - chr4_4:2850997-2851016 Msa0663920:intron 40.0%
GTGACAAACTGCTAGTTCAT+GGG - chr4_4:2850998-2851017 Msa0663920:intron 40.0%
TGACAAACTGCTAGTTCATG+GGG - chr4_4:2850999-2851018 Msa0663920:intron 40.0%
!! CTTGGCTTTGTACATAAGCT+TGG - chr4_4:2851024-2851043 Msa0663920:intron 40.0%
AAACGTTCAGCAAGCAATAC+TGG - chr4_4:2851069-2851088 Msa0663920:intron 40.0%
GAAAAGTAAGAACCTGTCTC+TGG - chr4_4:2851167-2851186 Msa0663920:intron 40.0%
ATGAATATGACTCCAGAGAC+AGG + chr4_4:2851182-2851201 None:intergenic 40.0%
TGAGCATCAACAAACTGGTT+GGG + chr4_4:2851294-2851313 None:intergenic 40.0%
ATGAGCATCAACAAACTGGT+TGG + chr4_4:2851295-2851314 None:intergenic 40.0%
TCACATGAGCATCAACAAAC+TGG + chr4_4:2851299-2851318 None:intergenic 40.0%
!! TCAAGTTGACGTGTCAACAA+TGG + chr4_4:2851482-2851501 None:intergenic 40.0%
GTTCGATGTGCGTGTTTGTT+TGG - chr4_4:2843418-2843437 Msa0663920:three_prime_UTR 45.0%
GAGTACTCCGAAAACAGAGA+AGG - chr4_4:2843889-2843908 Msa0663920:intron 45.0%
! TCAGAGGCCTTCTCTGTTTT+CGG + chr4_4:2843899-2843918 None:intergenic 45.0%
! CTATGGTTTGTCTTCCATGC+AGG - chr4_4:2843943-2843962 Msa0663920:intron 45.0%
CGGTTATTTGGCCGTTTATG+TGG - chr4_4:2844110-2844129 Msa0663920:intron 45.0%
GGCTGCTAAAGTACAAGAGA+AGG + chr4_4:2844764-2844783 None:intergenic 45.0%
GACGTAGACTCGTCCAAATA+CGG + chr4_4:2844864-2844883 None:intergenic 45.0%
GACGAGTCTACGTCTTACTT+TGG - chr4_4:2844870-2844889 Msa0663920:intron 45.0%
TTTATGATGGCCATGGAGGT+TGG - chr4_4:2844895-2844914 Msa0663920:CDS 45.0%
AGACAAGATACCAACCTCCA+TGG + chr4_4:2844908-2844927 None:intergenic 45.0%
TTGCACTGGGATCTCATCAT+TGG - chr4_4:2845023-2845042 Msa0663920:intron 45.0%
GTAGCCATGTTAAAGGAAGC+TGG - chr4_4:2845751-2845770 Msa0663920:intron 45.0%
AGCCATGTTAAAGGAAGCTG+GGG - chr4_4:2845753-2845772 Msa0663920:intron 45.0%
! TCCGTCTCTAGAAACTAGCT+GGG - chr4_4:2846191-2846210 Msa0663920:CDS 45.0%
CATGTAGTACCACAGGTTTG+TGG + chr4_4:2846222-2846241 None:intergenic 45.0%
CAAGGATGCTAAATATCCCC+TGG + chr4_4:2846273-2846292 None:intergenic 45.0%
CCTACAACCACTTAGTTTCC+GGG + chr4_4:2846314-2846333 None:intergenic 45.0%
GCCTACAACCACTTAGTTTC+CGG + chr4_4:2846315-2846334 None:intergenic 45.0%
TACGAAAGACTCAGTTCAGG+TGG + chr4_4:2846680-2846699 None:intergenic 45.0%
CCATACGAAAGACTCAGTTC+AGG + chr4_4:2846683-2846702 None:intergenic 45.0%
CCTGAACTGAGTCTTTCGTA+TGG - chr4_4:2846680-2846699 Msa0663920:intron 45.0%
AGAATGGATGAGATGATGCG+CGG - chr4_4:2846863-2846882 Msa0663920:intron 45.0%
ACAAAGAGGGTGGAGAGAAT+TGG - chr4_4:2846886-2846905 Msa0663920:intron 45.0%
TGGAGAGAATTGGCAGTCTT+GGG - chr4_4:2846896-2846915 Msa0663920:intron 45.0%
GGCAGTCTTGGGAGATAAAA+TGG - chr4_4:2846907-2846926 Msa0663920:intron 45.0%
AGTTGTCTGGTATGCTTGAG+GGG - chr4_4:2846933-2846952 Msa0663920:intron 45.0%
!! TCATTGGCTTCACTACTCCT+GGG + chr4_4:2846971-2846990 None:intergenic 45.0%
!! TTCATTGGCTTCACTACTCC+TGG + chr4_4:2846972-2846991 None:intergenic 45.0%
ATGGAAATCGTGTTGTACCC+AGG - chr4_4:2847376-2847395 Msa0663920:intron 45.0%
TGGAAATCGTGTTGTACCCA+GGG - chr4_4:2847377-2847396 Msa0663920:intron 45.0%
!! TCTTTGAAACTGGAGGGTGA+TGG + chr4_4:2847403-2847422 None:intergenic 45.0%
AGTTCAGAATTGCTGGACCA+AGG - chr4_4:2847454-2847473 Msa0663920:intron 45.0%
CCATTTGTTCCTACACACCT+TGG + chr4_4:2847474-2847493 None:intergenic 45.0%
CCAAGGTGTGTAGGAACAAA+TGG - chr4_4:2847471-2847490 Msa0663920:intron 45.0%
GACCCCATTCTGATTTCAGT+GGG - chr4_4:2848267-2848286 Msa0663920:intron 45.0%
TGGCCCACTGAAATCAGAAT+GGG + chr4_4:2848273-2848292 None:intergenic 45.0%
TTGGCCCACTGAAATCAGAA+TGG + chr4_4:2848274-2848293 None:intergenic 45.0%
TGTGTTATCAAGGAAAGGCC+AGG - chr4_4:2848370-2848389 Msa0663920:intron 45.0%
!! AAAGAGGATGTGGAAGTACC+TGG + chr4_4:2848391-2848410 None:intergenic 45.0%
GTGCAGTTACATGATGCTGA+AGG - chr4_4:2848492-2848511 Msa0663920:CDS 45.0%
! GTCAATTCACCATTTTGCGG+TGG - chr4_4:2848632-2848651 Msa0663920:intron 45.0%
TGCGACTCAGAATTGAGTCA+CGG - chr4_4:2848687-2848706 Msa0663920:intron 45.0%
TGTGTGCAACAGGAACTTGT+TGG - chr4_4:2848855-2848874 Msa0663920:intron 45.0%
!! TGCAACAGGAACTTGTTGGT+AGG - chr4_4:2848859-2848878 Msa0663920:intron 45.0%
!! AGGAACTTGTTGGTAGGTAG+AGG - chr4_4:2848865-2848884 Msa0663920:intron 45.0%
!! AACTTGTTGGTAGGTAGAGG+CGG - chr4_4:2848868-2848887 Msa0663920:intron 45.0%
! GTAGTCTTGCGCTTTCAAAC+TGG + chr4_4:2848898-2848917 None:intergenic 45.0%
TGCTGCAGATTGGGACTTAA+AGG + chr4_4:2848939-2848958 None:intergenic 45.0%
GGATGGGACTTTAATACCTC+AGG - chr4_4:2849009-2849028 Msa0663920:intron 45.0%
! GCTGCTATTTGAAAAGCCTG+AGG + chr4_4:2849028-2849047 None:intergenic 45.0%
AAACAGGGATAGCGTGTTGT+GGG + chr4_4:2849054-2849073 None:intergenic 45.0%
AAAACAGGGATAGCGTGTTG+TGG + chr4_4:2849055-2849074 None:intergenic 45.0%
! ACAACACGCTATCCCTGTTT+TGG - chr4_4:2849054-2849073 Msa0663920:intron 45.0%
! CAACACGCTATCCCTGTTTT+GGG - chr4_4:2849055-2849074 Msa0663920:intron 45.0%
GTCAATCTTGGATAGCAGAG+CGG + chr4_4:2849086-2849105 None:intergenic 45.0%
ATGAAATTCACGACAGGGTG+GGG + chr4_4:2849183-2849202 None:intergenic 45.0%
AGATCACAAGCCTGATCTTG+AGG - chr4_4:2849315-2849334 Msa0663920:intron 45.0%
! GACAGGATTCTAAAAGCTGG+CGG - chr4_4:2849346-2849365 Msa0663920:intron 45.0%
! ATCCAAGTTGGACGAGTCAA+TGG - chr4_4:2849373-2849392 Msa0663920:intron 45.0%
!! TTCCATTGACTCGTCCAACT+TGG + chr4_4:2849378-2849397 None:intergenic 45.0%
GTATTTGCCTGCTGAAAAGC+AGG - chr4_4:2849593-2849612 Msa0663920:intron 45.0%
!!! GTTTGAGTTTTTTGGTGGGG+AGG - chr4_4:2849798-2849817 Msa0663920:intron 45.0%
!!! TTGAGTTTTTTGGTGGGGAG+GGG - chr4_4:2849800-2849819 Msa0663920:intron 45.0%
! TCCCCCAAATTGGAGTTTTC+TGG - chr4_4:2849911-2849930 Msa0663920:intron 45.0%
! CCCAAATTGGAGTTTTCTGG+AGG - chr4_4:2849914-2849933 Msa0663920:intron 45.0%
CCCTCCAGAAAACTCCAATT+TGG + chr4_4:2849918-2849937 None:intergenic 45.0%
! ATGTTTGGTTCACAAGGGGA+GGG + chr4_4:2850060-2850079 None:intergenic 45.0%
!! AGGGATTTTAATGGAGGGGA+GGG + chr4_4:2850163-2850182 None:intergenic 45.0%
!! AGGGGAGGGATTTTAATGGA+GGG + chr4_4:2850168-2850187 None:intergenic 45.0%
! TTTGGTTCAATGGATGGGAG+GGG + chr4_4:2850191-2850210 None:intergenic 45.0%
! GTTTGGTTCAATGGATGGGA+GGG + chr4_4:2850192-2850211 None:intergenic 45.0%
CTCCCATCCATTGAACCAAA+CGG - chr4_4:2850191-2850210 Msa0663920:intron 45.0%
! GTCCGTTTGGTTCAATGGAT+GGG + chr4_4:2850196-2850215 None:intergenic 45.0%
! TTAGGGTCCGTTTGGTTCAA+TGG + chr4_4:2850201-2850220 None:intergenic 45.0%
TTGAACCAAACGGACCCTAA+AGG - chr4_4:2850201-2850220 Msa0663920:intron 45.0%
!! TATGACCTTTAGGGTCCGTT+TGG + chr4_4:2850209-2850228 None:intergenic 45.0%
GTATAAAGTCCACAAGCTGC+TGG + chr4_4:2850473-2850492 None:intergenic 45.0%
!! ACAGAAGCATCTGAAGTCAG+AGG + chr4_4:2850743-2850762 None:intergenic 45.0%
GAATTTCAGACTCAGGCAGA+TGG - chr4_4:2850862-2850881 Msa0663920:intron 45.0%
! TGCATGTTGAAGCACTAGTG+AGG - chr4_4:2850900-2850919 Msa0663920:intron 45.0%
! GCATGTTGAAGCACTAGTGA+GGG - chr4_4:2850901-2850920 Msa0663920:intron 45.0%
! CATGTTGAAGCACTAGTGAG+GGG - chr4_4:2850902-2850921 Msa0663920:intron 45.0%
CTGGTGTAGACACAGTTACA+TGG - chr4_4:2851088-2851107 Msa0663920:intron 45.0%
AGCATCAACAAACTGGTTGG+GGG + chr4_4:2851292-2851311 None:intergenic 45.0%
GAGCATCAACAAACTGGTTG+GGG + chr4_4:2851293-2851312 None:intergenic 45.0%
TTGACGTGTCAACAATGGTG+AGG + chr4_4:2851477-2851496 None:intergenic 45.0%
TCGATGTCTCAACAATGGTG+AGG + chr4_4:2851604-2851623 None:intergenic 45.0%
GGAAGTCGATGTCTCAACAA+TGG + chr4_4:2851609-2851628 None:intergenic 45.0%
!! TGTTGAGACATCGACTTCCT+TGG - chr4_4:2851610-2851629 Msa0663920:CDS 45.0%
! ACAGAGAAGGCCTCTGAAGA+TGG - chr4_4:2843902-2843921 Msa0663920:intron 50.0%
! GCCTCTGAAGATGGTGAGAA+TGG - chr4_4:2843911-2843930 Msa0663920:intron 50.0%
GCCATTCTCACCATCTTCAG+AGG + chr4_4:2843915-2843934 None:intergenic 50.0%
GAGAATGGCATGCTTCGCTA+TGG - chr4_4:2843926-2843945 Msa0663920:intron 50.0%
GTTTGTCTTCCATGCAGGGT+TGG - chr4_4:2843948-2843967 Msa0663920:intron 50.0%
TGATCTGCGATTGACATCGC+TGG - chr4_4:2844342-2844361 Msa0663920:intron 50.0%
ATACGGATGAGCTGCATGCT+GGG + chr4_4:2844847-2844866 None:intergenic 50.0%
AATACGGATGAGCTGCATGC+TGG + chr4_4:2844848-2844867 None:intergenic 50.0%
GCATGCAGCTCATCCGTATT+TGG - chr4_4:2844848-2844867 Msa0663920:intron 50.0%
GGTGTTTATGATGGCCATGG+AGG - chr4_4:2844891-2844910 Msa0663920:CDS 50.0%
GCCATGTTAAAGGAAGCTGG+GGG - chr4_4:2845754-2845773 Msa0663920:intron 50.0%
TCCCCCAGCTTCCTTTAACA+TGG + chr4_4:2845758-2845777 None:intergenic 50.0%
TGCCAAGTTTCTACACCAGC+AGG - chr4_4:2846019-2846038 Msa0663920:intron 50.0%
CACCTGCTGGTGTAGAAACT+TGG + chr4_4:2846024-2846043 None:intergenic 50.0%
TTCTACACCAGCAGGTGCTT+AGG - chr4_4:2846027-2846046 Msa0663920:intron 50.0%
AAGCCAGGGGACGAGATAAT+AGG - chr4_4:2846161-2846180 Msa0663920:CDS 50.0%
AGCCAGGGGACGAGATAATA+GGG - chr4_4:2846162-2846181 Msa0663920:CDS 50.0%
AACCCTATTATCTCGTCCCC+TGG + chr4_4:2846167-2846186 None:intergenic 50.0%
AGGGGACGAGATAATAGGGT+TGG - chr4_4:2846166-2846185 Msa0663920:CDS 50.0%
! GTCCGTCTCTAGAAACTAGC+TGG - chr4_4:2846190-2846209 Msa0663920:CDS 50.0%
! GCCCAGCTAGTTTCTAGAGA+CGG + chr4_4:2846195-2846214 None:intergenic 50.0%
AGTACCACAGGTTTGTGGCT+AGG + chr4_4:2846217-2846236 None:intergenic 50.0%
GGATGCTAAATATCCCCTGG+TGG + chr4_4:2846270-2846289 None:intergenic 50.0%
CCCGGAAACTAAGTGGTTGT+AGG - chr4_4:2846311-2846330 Msa0663920:intron 50.0%
! CCAAGCCTTATCCCACTAAG+CGG - chr4_4:2846519-2846538 Msa0663920:intron 50.0%
! CAAGCCTTATCCCACTAAGC+GGG - chr4_4:2846520-2846539 Msa0663920:intron 50.0%
! AAGCCTTATCCCACTAAGCG+GGG - chr4_4:2846521-2846540 Msa0663920:intron 50.0%
AGATGATGCGCGGACAAAGA+GGG - chr4_4:2846873-2846892 Msa0663920:intron 50.0%
GTGGAGAGAATTGGCAGTCT+TGG - chr4_4:2846895-2846914 Msa0663920:intron 50.0%
AGGGGTTTATATGGTCTCCC+AGG - chr4_4:2846951-2846970 Msa0663920:intron 50.0%
! CAATGAACGTGCCGATGAGT+GGG - chr4_4:2846985-2847004 Msa0663920:intron 50.0%
CTCCTCAAAAGCCCACTCAT+CGG + chr4_4:2846999-2847018 None:intergenic 50.0%
! GTTACTTTGCTCGTGTCCGT+TGG - chr4_4:2847205-2847224 Msa0663920:intron 50.0%
GTCCGTTGGAAGTTCAACCA+AGG - chr4_4:2847219-2847238 Msa0663920:intron 50.0%
ATTGCTGGACCAAGGTGTGT+AGG - chr4_4:2847462-2847481 Msa0663920:intron 50.0%
GGACCCCATTCTGATTTCAG+TGG - chr4_4:2848266-2848285 Msa0663920:intron 50.0%
GGCCCACTGAAATCAGAATG+GGG + chr4_4:2848272-2848291 None:intergenic 50.0%
GATTTCAGTGGGCCAAACTG+TGG - chr4_4:2848278-2848297 Msa0663920:intron 50.0%
TATGGCCTCAAGCATGTGCA+AGG + chr4_4:2848600-2848619 None:intergenic 50.0%
! TTCACCATTTTGCGGTGGAG+TGG - chr4_4:2848637-2848656 Msa0663920:intron 50.0%
!! CCTCAAATTTGGTGCAGGTC+TGG + chr4_4:2848738-2848757 None:intergenic 50.0%
CCAGACCTGCACCAAATTTG+AGG - chr4_4:2848735-2848754 Msa0663920:intron 50.0%
CACACACAAGCAGATCTAGC+TGG + chr4_4:2848841-2848860 None:intergenic 50.0%
GATCTGCTTGTGTGTGCAAC+AGG - chr4_4:2848845-2848864 Msa0663920:intron 50.0%
GGGTGGGGAGTTTAGACTTT+GGG + chr4_4:2849162-2849181 None:intergenic 50.0%
TGAAATTCACGACAGGGTGG+GGG + chr4_4:2849182-2849201 None:intergenic 50.0%
CAAACACTTGCAACGGGTGA+AGG + chr4_4:2849523-2849542 None:intergenic 50.0%
!! GTCACAACCTGCTTTTCAGC+AGG + chr4_4:2849603-2849622 None:intergenic 50.0%
!! ATTGGAGTTTTCTGGAGGGG+AGG - chr4_4:2849919-2849938 Msa0663920:intron 50.0%
!! TTGGAGTTTTCTGGAGGGGA+GGG - chr4_4:2849920-2849939 Msa0663920:intron 50.0%
! TGTTTGGTTCACAAGGGGAG+GGG + chr4_4:2850059-2850078 None:intergenic 50.0%
! CATGTTTGGTTCACAAGGGG+AGG + chr4_4:2850061-2850080 None:intergenic 50.0%
TTCAAAAGAGGGAAGGGGAG+GGG + chr4_4:2850107-2850126 None:intergenic 50.0%
GTTCAAAAGAGGGAAGGGGA+GGG + chr4_4:2850108-2850127 None:intergenic 50.0%
TTTAATGGAGGGGAGGGGAA+GGG + chr4_4:2850157-2850176 None:intergenic 50.0%
! TTTTAATGGAGGGGAGGGGA+AGG + chr4_4:2850158-2850177 None:intergenic 50.0%
!! GGGATTTTAATGGAGGGGAG+GGG + chr4_4:2850162-2850181 None:intergenic 50.0%
!! GAGGGATTTTAATGGAGGGG+AGG + chr4_4:2850164-2850183 None:intergenic 50.0%
!! GGGGAGGGATTTTAATGGAG+GGG + chr4_4:2850167-2850186 None:intergenic 50.0%
!! GAGGGGAGGGATTTTAATGG+AGG + chr4_4:2850169-2850188 None:intergenic 50.0%
! CGTTTGGTTCAATGGATGGG+AGG + chr4_4:2850193-2850212 None:intergenic 50.0%
! GGTCCGTTTGGTTCAATGGA+TGG + chr4_4:2850197-2850216 None:intergenic 50.0%
TCAACCCACTCCTAATCCTC+CGG - chr4_4:2850787-2850806 Msa0663920:intron 50.0%
TCAGCTTCAGACTGTTGTGC+CGG + chr4_4:2850809-2850828 None:intergenic 50.0%
CTGCTAGTTCATGGGGTTCT+TGG - chr4_4:2851006-2851025 Msa0663920:intron 50.0%
CTTCATGCCTAAGCACCTGC+TGG + chr4_4:2846037-2846056 None:intergenic 55.0%
ACTGGGTGCCAGTAAAAGCC+AGG - chr4_4:2846146-2846165 Msa0663920:CDS 55.0%
CTGGGTGCCAGTAAAAGCCA+GGG - chr4_4:2846147-2846166 Msa0663920:CDS 55.0%
TGGGTGCCAGTAAAAGCCAG+GGG - chr4_4:2846148-2846167 Msa0663920:CDS 55.0%
!! TCTCGTCCCCTGGCTTTTAC+TGG + chr4_4:2846157-2846176 None:intergenic 55.0%
CCGCTTAGTGGGATAAGGCT+TGG + chr4_4:2846522-2846541 None:intergenic 55.0%
CTTATCCCACTAAGCGGGGT+CGG - chr4_4:2846525-2846544 Msa0663920:intron 55.0%
GAGATGATGCGCGGACAAAG+AGG - chr4_4:2846872-2846891 Msa0663920:intron 55.0%
CCACTCATCGGCACGTTCAT+TGG + chr4_4:2846987-2847006 None:intergenic 55.0%
! CCAATGAACGTGCCGATGAG+TGG - chr4_4:2846984-2847003 Msa0663920:intron 55.0%
!! TGCCGATGAGTGGGCTTTTG+AGG - chr4_4:2846994-2847013 Msa0663920:intron 55.0%
!! CGATGAGTGGGCTTTTGAGG+AGG - chr4_4:2846997-2847016 Msa0663920:intron 55.0%
TGGGCCAAACTGTGGAAGCA+CGG - chr4_4:2848286-2848305 Msa0663920:intron 55.0%
! ACCATTTTGCGGTGGAGTGG+CGG - chr4_4:2848640-2848659 Msa0663920:intron 55.0%
AGGGATAGCGTGTTGTGGGT+TGG + chr4_4:2849050-2849069 None:intergenic 55.0%
GAGCGGCTGATCCCAAAACA+GGG + chr4_4:2849069-2849088 None:intergenic 55.0%
AGAGCGGCTGATCCCAAAAC+AGG + chr4_4:2849070-2849089 None:intergenic 55.0%
GGGGTGGGGAGTTTAGACTT+TGG + chr4_4:2849163-2849182 None:intergenic 55.0%
GCTGGCGGTTTCATCCAAGT+TGG - chr4_4:2849361-2849380 Msa0663920:intron 55.0%
! GGCATCGTTTAGGGTCCGTT+TGG - chr4_4:2849776-2849795 Msa0663920:intron 55.0%
!!! AGTTTTTTGGTGGGGAGGGG+AGG - chr4_4:2849803-2849822 Msa0663920:intron 55.0%
!!! GTTTTTTGGTGGGGAGGGGA+GGG - chr4_4:2849804-2849823 Msa0663920:intron 55.0%
!!! TTTTTTGGTGGGGAGGGGAG+GGG - chr4_4:2849805-2849824 Msa0663920:intron 55.0%
!! AGTTTTCTGGAGGGGAGGGA+AGG - chr4_4:2849924-2849943 Msa0663920:intron 55.0%
GGTTCAAAAGAGGGAAGGGG+AGG + chr4_4:2850109-2850128 None:intergenic 55.0%
! GGGGAGGGGAGGGATTTTAA+TGG + chr4_4:2850045-2850064 None:intergenic 55.0%
TTCAATGGATGGGAGGGGAG+GGG + chr4_4:2850186-2850205 None:intergenic 55.0%
GTTCAATGGATGGGAGGGGA+GGG + chr4_4:2850187-2850206 None:intergenic 55.0%
AAAGTCCACAAGCTGCTGGC+TGG + chr4_4:2850469-2850488 None:intergenic 55.0%
GTTGAGCAGATGACTCAGGC+TGG + chr4_4:2850772-2850791 None:intergenic 55.0%
! GTGGGTTGAGCAGATGACTC+AGG + chr4_4:2850776-2850795 None:intergenic 55.0%
TGTGCCGGAGGATTAGGAGT+GGG + chr4_4:2850794-2850813 None:intergenic 55.0%
TTGTGCCGGAGGATTAGGAG+TGG + chr4_4:2850795-2850814 None:intergenic 55.0%
GACTGTTGTGCCGGAGGATT+AGG + chr4_4:2850800-2850819 None:intergenic 55.0%
! GTTGAAGCACTAGTGAGGGG+AGG - chr4_4:2850905-2850924 Msa0663920:intron 55.0%
TAGTGAGGGGAGGTGGTTCA+TGG - chr4_4:2850915-2850934 Msa0663920:intron 55.0%
! AGAAGCACGCCAACCCTGCA+TGG + chr4_4:2843960-2843979 None:intergenic 60.0%
! GCAGGGTTGGCGTGCTTCTA+TGG - chr4_4:2843961-2843980 Msa0663920:intron 60.0%
TGGGCCTAGCCACAAACCTG+TGG - chr4_4:2846210-2846229 Msa0663920:CDS 60.0%
CGACCCCGCTTAGTGGGATA+AGG + chr4_4:2846527-2846546 None:intergenic 60.0%
TGTAGCCGACCCCGCTTAGT+GGG + chr4_4:2846533-2846552 None:intergenic 60.0%
ATGTAGCCGACCCCGCTTAG+TGG + chr4_4:2846534-2846553 None:intergenic 60.0%
TGATGCGCGGACAAAGAGGG+TGG - chr4_4:2846876-2846895 Msa0663920:intron 60.0%
! AACTGGAGGGTGATGGCCCT+GGG + chr4_4:2847396-2847415 None:intergenic 60.0%
! AAACTGGAGGGTGATGGCCC+TGG + chr4_4:2847397-2847416 None:intergenic 60.0%
CACGCCGTGCTTCCACAGTT+TGG + chr4_4:2848293-2848312 None:intergenic 60.0%
GCGTGTGTGGCTGTCATCAG+AGG - chr4_4:2848308-2848327 Msa0663920:intron 60.0%
ACCGCCACTCCACCGCAAAA+TGG + chr4_4:2848644-2848663 None:intergenic 60.0%
ATTCACGACAGGGTGGGGGT+GGG + chr4_4:2849178-2849197 None:intergenic 60.0%
AATTCACGACAGGGTGGGGG+TGG + chr4_4:2849179-2849198 None:intergenic 60.0%
TGGTTCACAAGGGGAGGGGA+GGG + chr4_4:2850055-2850074 None:intergenic 60.0%
TTGGTTCACAAGGGGAGGGG+AGG + chr4_4:2850056-2850075 None:intergenic 60.0%
AAGAGGGAAGGGGAGGGGAA+GGG + chr4_4:2850102-2850121 None:intergenic 60.0%
AAAGAGGGAAGGGGAGGGGA+AGG + chr4_4:2850103-2850122 None:intergenic 60.0%
GGTTCAATGGATGGGAGGGG+AGG + chr4_4:2850188-2850207 None:intergenic 60.0%
CATGTCCAGCCAGCAGCTTG+TGG - chr4_4:2850461-2850480 Msa0663920:intron 60.0%
AGGTGCTTGGCACCAACAGC+TGG - chr4_4:2850668-2850687 Msa0663920:intron 60.0%
TGCTTGGCACCAACAGCTGG+TGG - chr4_4:2850671-2850690 Msa0663920:intron 60.0%
! GCACCAACAGCTGGTGGTGA+GGG - chr4_4:2850677-2850696 Msa0663920:intron 60.0%
CATCCCTCACCACCAGCTGT+TGG + chr4_4:2850683-2850702 None:intergenic 60.0%
GCTTCAGACTGTTGTGCCGG+AGG + chr4_4:2850806-2850825 None:intergenic 60.0%
! GAAGCACTAGTGAGGGGAGG+TGG - chr4_4:2850908-2850927 Msa0663920:intron 60.0%
! CTGTGGAAGCACGGCGTGTG+TGG - chr4_4:2848295-2848314 Msa0663920:intron 65.0%
TGAGTCGCACCGCCGCGTAT+GGG + chr4_4:2848676-2848695 None:intergenic 65.0%
TTCACGACAGGGTGGGGGTG+GGG + chr4_4:2849177-2849196 None:intergenic 65.0%
ATGGATGGGAGGGGAGGGGA+GGG + chr4_4:2850182-2850201 None:intergenic 65.0%
AATGGATGGGAGGGGAGGGG+AGG + chr4_4:2850183-2850202 None:intergenic 65.0%
! GGCACCAACAGCTGGTGGTG+AGG - chr4_4:2850676-2850695 Msa0663920:intron 65.0%
! GGTGTCGCCGCACCCATACG+CGG - chr4_4:2848661-2848680 Msa0663920:intron 70.0%
CTGAGTCGCACCGCCGCGTA+TGG + chr4_4:2848677-2848696 None:intergenic 70.0%
GTCGCCGCACCCATACGCGG+CGG - chr4_4:2848664-2848683 Msa0663920:intron 75.0%
CGCACCGCCGCGTATGGGTG+CGG + chr4_4:2848671-2848690 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr4_4 gene 2842859 2851667 2842859 ID=Msa0663920;Name=Msa0663920
chr4_4 mRNA 2842859 2851667 2842859 ID=Msa0663920-mRNA-1;Parent=Msa0663920;Name=Msa0663920-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|1|0.91|1|0.90|0.91|12|823|413
chr4_4 exon 2842859 2843897 2842859 ID=Msa0663920-mRNA-1:exon:836;Parent=Msa0663920-mRNA-1
chr4_4 exon 2844017 2844071 2844017 ID=Msa0663920-mRNA-1:exon:835;Parent=Msa0663920-mRNA-1
chr4_4 exon 2844168 2844220 2844168 ID=Msa0663920-mRNA-1:exon:834;Parent=Msa0663920-mRNA-1
chr4_4 exon 2844882 2844958 2844882 ID=Msa0663920-mRNA-1:exon:833;Parent=Msa0663920-mRNA-1
chr4_4 exon 2845105 2845228 2845105 ID=Msa0663920-mRNA-1:exon:832;Parent=Msa0663920-mRNA-1
chr4_4 exon 2846135 2846260 2846135 ID=Msa0663920-mRNA-1:exon:831;Parent=Msa0663920-mRNA-1
chr4_4 exon 2847051 2847128 2847051 ID=Msa0663920-mRNA-1:exon:830;Parent=Msa0663920-mRNA-1
chr4_4 exon 2847508 2847661 2847508 ID=Msa0663920-mRNA-1:exon:829;Parent=Msa0663920-mRNA-1
chr4_4 exon 2848421 2848529 2848421 ID=Msa0663920-mRNA-1:exon:828;Parent=Msa0663920-mRNA-1
chr4_4 exon 2849614 2849677 2849614 ID=Msa0663920-mRNA-1:exon:827;Parent=Msa0663920-mRNA-1
chr4_4 exon 2850535 2850657 2850535 ID=Msa0663920-mRNA-1:exon:826;Parent=Msa0663920-mRNA-1
chr4_4 exon 2851605 2851667 2851605 ID=Msa0663920-mRNA-1:exon:825;Parent=Msa0663920-mRNA-1
chr4_4 CDS 2851605 2851667 2851605 ID=Msa0663920-mRNA-1:cds;Parent=Msa0663920-mRNA-1
chr4_4 CDS 2850535 2850657 2850535 ID=Msa0663920-mRNA-1:cds;Parent=Msa0663920-mRNA-1
chr4_4 CDS 2849614 2849677 2849614 ID=Msa0663920-mRNA-1:cds;Parent=Msa0663920-mRNA-1
chr4_4 CDS 2848421 2848529 2848421 ID=Msa0663920-mRNA-1:cds;Parent=Msa0663920-mRNA-1
chr4_4 CDS 2847508 2847661 2847508 ID=Msa0663920-mRNA-1:cds;Parent=Msa0663920-mRNA-1
chr4_4 CDS 2847051 2847128 2847051 ID=Msa0663920-mRNA-1:cds;Parent=Msa0663920-mRNA-1
chr4_4 CDS 2846135 2846260 2846135 ID=Msa0663920-mRNA-1:cds;Parent=Msa0663920-mRNA-1
chr4_4 CDS 2845105 2845228 2845105 ID=Msa0663920-mRNA-1:cds;Parent=Msa0663920-mRNA-1
chr4_4 CDS 2844882 2844958 2844882 ID=Msa0663920-mRNA-1:cds;Parent=Msa0663920-mRNA-1
chr4_4 CDS 2844168 2844220 2844168 ID=Msa0663920-mRNA-1:cds;Parent=Msa0663920-mRNA-1
chr4_4 CDS 2844017 2844071 2844017 ID=Msa0663920-mRNA-1:cds;Parent=Msa0663920-mRNA-1
chr4_4 CDS 2843682 2843897 2843682 ID=Msa0663920-mRNA-1:cds;Parent=Msa0663920-mRNA-1
chr4_4 three_prime_UTR 2842859 2843681 2842859 ID=Msa0663920-mRNA-1:three_prime_utr;Parent=Msa0663920-mRNA-1
Gene Sequence

>Msa0663920

TTCTTTCTTTCTTTACACACAAACATATCAATCAATAATCATCGCTTTCTCTCTCTCTCACGATTTGAGATGGGGATATATCTGAGTACTCCGAAAACAGAGAAGGCCTCTGAAGATGGTGAGAATGGCATGCTTCGCTATGGTTTGTCTTCCATGCAGGGTTGGCGTGCTTCTATGGAAGATGCTCATGCAGCTCATCCGTATTTGGACGAGTCTACGTCTTACTTTGGTGTTTATGATGGCCATGGAGGTAAAGCTGTTTCAAAATTCTGTGCCAAGTTTCTACACCAGCAGGTGCTTAGGCATGAAGCTTATTTAGCTGGAGATATAGCCACATCTTTACAGAAATCTTTCCTAAGAATGGATGAGATGATGCGCGGACAAAGAGGGTGGAGAGAATTGGCAGTCTTGGGAGATAAAATGGAAAAGTTGTCTGGTATGCTTGAGGGGTTTATATGGTCTCCCAGGAGTAGTGAAGCCAATGAACGTGCCGATGAGTGGGCTTTTGAGGAGGGCCATCACCCTCCAGTTTCAAAGACCCAATATTGCGGGCTAATGAGAATATTGCAAGTTCAGAATTGCTGGACCAAGGGACCCCATTCTGATTTCAGTGGGCCAAACTGTGGAAGCACGGCGTGTGTGGCTGTCATCAGAGGAAACAAACTTGTTGTTGCAAATGCTGGTGATTCTAGATGTGTGTTATCAAGGAAAGGCCAGGCACACAATTTGTCTAAAGATCACAAGCCTGATCTTGAGGTTGAGAAAGACAGGATTCTAAAAGCTGGCGGTTTCATCCAAGTTGGACGAGTCAATGGAAGTTTGAATTTGGCTAGAGCAATTGGAGATATGGAATTCAAGCAGAATAAGTATTTGCCTGCTGAAAAGCAGGTTGTGACTGCTGATCCTGACGTAACTTCAGTTGAGCTTTGCGAAGATGATGAGTTTCTTGTGATAGCTTGTGATGGGATATGGGATTGCATGTCCAGCCAGCAGCTTGTGGACTTTATACATGGCCAGTTAAAGACGGAGAATAAACTTTCTGTGGTTTGTGAGAAAGTATTCGATAGGTGCTTGGCACCAACAGCTGGTGGTGAGGGATGTGATAACATGACCATGATCTTGATTCAGTTCAAAAATCCTCTGACTTCAGATGCTTCTGTCACAGACCAGCCTGAGTCATCTGCTCAACCCACTCCTAATCCTCCGGCACAACAGTCTGAAGCTGACAGAAAGTTAGATTAA
Protein sequence

>Msa0663920

FFLSLHTNISINNHRFLSLSRFEMGIYLSTPKTEKASEDGENGMLRYGLSSMQGWRASMEDAHAAHPYLDESTSYFGVYDGHGGKAVSKFCAKFLHQQVLRHEAYLAGDIATSLQKSFLRMDEMMRGQRGWRELAVLGDKMEKLSGMLEGFIWSPRSSEANERADEWAFEEGHHPPVSKTQYCGLMRILQVQNCWTKGPHSDFSGPNCGSTACVAVIRGNKLVVANAGDSRCVLSRKGQAHNLSKDHKPDLEVEKDRILKAGGFIQVGRVNGSLNLARAIGDMEFKQNKYLPAEKQVVTADPDVTSVELCEDDEFLVIACDGIWDCMSSQQLVDFIHGQLKTENKLSVVCEKVFDRCLAPTAGGEGCDNMTMILIQFKNPLTSDASVTDQPESSAQPTPNPPAQQSEADRKLD*