AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0075500


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0075500 MtrunA17_Chr1g0184181 96.885 610 19 0 1 610 1 610 0.0 1212
Msa0075500 MtrunA17_Chr8g0388631 28.916 498 329 6 91 574 65 551 1.02e-49 182
Msa0075500 MtrunA17_Chr8g0346601 27.568 555 356 10 33 575 17 537 1.06e-44 167
Msa0075500 MtrunA17_Chr3g0117701 26.523 509 358 6 83 582 245 746 3.21e-43 166
Msa0075500 MtrunA17_Chr6g0450741 27.677 495 325 6 98 574 190 669 2.84e-41 159
Msa0075500 MtrunA17_Chr4g0059101 25.510 490 353 5 91 573 167 651 2.88e-41 159
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0075500 AT2G31240.1 66.205 577 183 6 22 590 39 611 0.0 779
Msa0075500 AT3G27960.1 30.171 527 346 11 91 603 143 661 7.80e-53 192
Msa0075500 AT3G27960.3 30.171 527 346 11 91 603 143 661 7.80e-53 192
Msa0075500 AT4G10840.1 29.191 507 324 8 93 575 78 573 1.84e-48 179
Msa0075500 AT3G27960.2 30.044 456 301 8 91 533 143 593 4.89e-48 178
Msa0075500 AT4G10840.2 28.879 464 296 7 93 533 78 530 1.48e-44 167
Msa0075500 AT1G27500.1 26.653 484 322 7 114 579 161 629 8.15e-42 161
Msa0075500 AT1G27500.2 26.653 484 322 7 114 579 172 640 1.03e-41 160

Find 167 sgRNAs with CRISPR-Local

Find 247 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTATATCAGTCATATATTT+TGG 0.085468 1_2:-50924400 Msa0075500:three_prime_UTR
TGCTATGAGTTTGCAGTTAA+TGG 0.164879 1_2:-50927369 Msa0075500:CDS
GAAGCAGGCTATTCCTTATT+TGG 0.171283 1_2:-50926439 Msa0075500:CDS
TGGTTATATCTACAACAATT+TGG 0.200770 1_2:-50926364 Msa0075500:CDS
AGCTTTGGTCCCAAACATTT+TGG 0.213827 1_2:-50926390 Msa0075500:CDS
GGTTTGTTGCGGGTGAAAAT+AGG 0.214873 1_2:+50927698 None:intergenic
GCTGCATGTGTATTATTATT+AGG 0.225487 1_2:+50924723 None:intergenic
GGTATCTTAATAAGGCTAAT+AGG 0.226066 1_2:-50927304 Msa0075500:CDS
TCGGAAGTGTTTGGAGATTA+AGG 0.232786 1_2:-50927153 Msa0075500:CDS
TAATAAGGCTAATAGGGTTT+TGG 0.236340 1_2:-50927297 Msa0075500:CDS
GAGGAAGATAGTGAGGAGTT+AGG 0.240509 1_2:-50927119 Msa0075500:CDS
ATGCTGCAGGTGTACTATTA+TGG 0.241724 1_2:+50924661 None:intergenic
AATTATATAAGCTAGCTTAT+TGG 0.260877 1_2:+50924516 None:intergenic
GGTTATATCTACAACAATTT+GGG 0.261299 1_2:-50926363 Msa0075500:CDS
GGGTGGTTGTTGTTGCTTAC+AGG 0.274076 1_2:-50926468 Msa0075500:CDS
AGGAGTTAGGGAAAGGGAAT+AGG 0.275680 1_2:-50927106 Msa0075500:CDS
GAGCATTTCTTCGGTTGTTT+TGG 0.276205 1_2:+50927562 None:intergenic
TCAGCAGCACTTTCCAAATA+AGG 0.279505 1_2:+50926426 None:intergenic
AAAAGTTTGCAGACTGTAAA+AGG 0.282943 1_2:-50926695 Msa0075500:CDS
GGTTTAGCTGCATTGAAAAT+TGG 0.289450 1_2:-50927494 Msa0075500:CDS
GTCTTAATTATGGTTTAAAT+AGG 0.293303 1_2:-50927343 Msa0075500:CDS
TGTGTCAGGTTGGGAGTTAC+TGG 0.296347 1_2:+50924638 None:intergenic
GGTGTAGAGGGGTTTGTTGC+GGG 0.299833 1_2:+50927688 None:intergenic
AATAGGTTTAGTGATAGTTT+AGG 0.302645 1_2:-50927326 Msa0075500:CDS
TCAAAGGCTTATGGTGATAT+TGG 0.309390 1_2:-50926216 Msa0075500:CDS
AGGAAGATAGTGAGGAGTTA+GGG 0.310369 1_2:-50927118 Msa0075500:CDS
ATAGGTTTAGTGATAGTTTA+GGG 0.311847 1_2:-50927325 Msa0075500:CDS
ACGAGCGAGGTGAGAGAAAA+AGG 0.315849 1_2:+50927766 None:intergenic
TTAATGGGTAGTCTTAATTA+TGG 0.322455 1_2:-50927353 Msa0075500:CDS
ATAAGCTAGCTTATTGGTAT+TGG 0.325138 1_2:+50924522 None:intergenic
CAGAATCTTTCAAAGGCTTA+TGG 0.327198 1_2:-50926225 Msa0075500:CDS
CCTCCGAGTGCTGCTCTTGT+GGG 0.336592 1_2:+50926511 None:intergenic
TATGTCAGGTTGGGAGTTAT+TGG 0.341920 1_2:+50924698 None:intergenic
AGGTGTTTAGAGATTTCTAT+TGG 0.345983 1_2:-50926675 Msa0075500:CDS
GTATCTTAATAAGGCTAATA+GGG 0.348444 1_2:-50927303 Msa0075500:CDS
TATTTGACTGAATTGGTTGC+TGG 0.355631 1_2:-50924471 Msa0075500:three_prime_UTR
GGCGTTGGAGCAGAATGTTT+TGG 0.357994 1_2:-50926916 Msa0075500:CDS
GTTTGTTGCGGGTGAAAATA+GGG 0.359213 1_2:+50927699 None:intergenic
AGAGAATCTTCGGAAGTGTT+TGG 0.370920 1_2:-50927162 Msa0075500:CDS
GCACATGATAGGAAGCTTCT+TGG 0.374776 1_2:-50926972 Msa0075500:CDS
GCGAATATGATGATTGCTTT+GGG 0.375275 1_2:-50926831 Msa0075500:CDS
ATAACCAACTCCAAAATGTT+TGG 0.376664 1_2:+50926380 None:intergenic
AGGGTTGACATGGTTTGAAA+TGG 0.377879 1_2:+50927665 None:intergenic
CTTCTTGGGATTGTTTATAG+TGG 0.378113 1_2:-50926957 Msa0075500:CDS
GTGTTTGTGTTGATGATGTT+AGG 0.380305 1_2:-50927256 Msa0075500:CDS
TAGTTTAGGGTATCTTAATA+AGG 0.387240 1_2:-50927312 Msa0075500:CDS
GGAAATTTCATTCAATGAAA+AGG 0.398867 1_2:-50927522 Msa0075500:CDS
CTTCTTCTGCACTTGCTCCA+TGG 0.399591 1_2:+50924838 None:intergenic
CCCTCCGAGTGCTGCTCTTG+TGG 0.404697 1_2:+50926510 None:intergenic
GCTATGAGTTTGCAGTTAAT+GGG 0.407040 1_2:-50927368 Msa0075500:CDS
GGATGTCTGCTAAACTGTTC+GGG 0.410647 1_2:+50924602 None:intergenic
TGCGAATATGATGATTGCTT+TGG 0.410869 1_2:-50926832 Msa0075500:CDS
AGCAGCAAGTTATAGATGCT+TGG 0.412778 1_2:-50924866 Msa0075500:CDS
AGCTCTTGTGCTTGTATCAA+TGG 0.413035 1_2:-50926739 Msa0075500:CDS
GGAGTTAGGGAAAGGGAATA+GGG 0.418677 1_2:-50927105 Msa0075500:CDS
TAACCAACTCCAAAATGTTT+GGG 0.419203 1_2:+50926381 None:intergenic
GAGATACATACGAAGCGATT+GGG 0.420372 1_2:-50927014 Msa0075500:CDS
GGGTTGACATGGTTTGAAAT+GGG 0.422427 1_2:+50927666 None:intergenic
TGGGATTGTTTATAGTGGGA+TGG 0.423640 1_2:-50926952 Msa0075500:CDS
GGAAGTGTATCTGCAAGAAT+AGG 0.426493 1_2:-50926489 Msa0075500:CDS
GGGGAAAGCGTTATGTAATC+AGG 0.427739 1_2:-50926718 Msa0075500:CDS
GAATGCTTTGAGCATTTCTT+CGG 0.432282 1_2:+50927553 None:intergenic
GGTTTGAAATGGGGTGTAGA+GGG 0.432347 1_2:+50927676 None:intergenic
TCCGTATTGTTTGAAGGCGT+TGG 0.435615 1_2:-50927036 Msa0075500:CDS
AGGATGTCTGCTAAACTGTT+CGG 0.436022 1_2:+50924601 None:intergenic
GGGTGTAGAGGGGTTTGTTG+CGG 0.438716 1_2:+50927687 None:intergenic
GAAGAATTGGAATCTTAGTT+CGG 0.440097 1_2:-50926880 Msa0075500:CDS
GCTCTTGTGCTTGTATCAAT+GGG 0.440321 1_2:-50926738 Msa0075500:CDS
CACATGATAGGAAGCTTCTT+GGG 0.440834 1_2:-50926971 Msa0075500:CDS
AAGAGGCGCTAGAGAATCTT+CGG 0.442376 1_2:-50927172 Msa0075500:CDS
GGTGTTTAGAGATTTCTATT+GGG 0.444294 1_2:-50926674 Msa0075500:CDS
GATTGACGTGGCGGTGTGTC+AGG 0.451015 1_2:+50924624 None:intergenic
GGCGCTTCCGTATTGTTTGA+AGG 0.451987 1_2:-50927042 Msa0075500:CDS
GCAGCAAGTTATAGATGCTT+GGG 0.454415 1_2:-50924865 Msa0075500:CDS
TCATGCTGTGCAATTTGAGT+TGG 0.455338 1_2:-50927225 Msa0075500:CDS
TTGATGAATGCCTATGGTAC+TGG 0.457186 1_2:-50924560 Msa0075500:three_prime_UTR
TGCTGCAGGTGTACTATTAT+GGG 0.459170 1_2:+50924662 None:intergenic
GAAGTGTATCTGCAAGAATA+GGG 0.459783 1_2:-50926488 Msa0075500:CDS
ATAGTGAGGAGTTAGGGAAA+GGG 0.461155 1_2:-50927112 Msa0075500:CDS
GGAAAGGGAAGAGCCTTCAT+AGG 0.464833 1_2:+50924744 None:intergenic
AACTGCAAACTCATAGCATA+AGG 0.469559 1_2:+50927374 None:intergenic
CTGTGGAGGTTGCACATGAT+AGG 0.478386 1_2:-50926983 Msa0075500:CDS
GCGGGTGAAAATAGGGTTGA+TGG 0.478725 1_2:+50927706 None:intergenic
TGTGTATTATTATTAGGAAA+GGG 0.478913 1_2:+50924729 None:intergenic
GTCAGCAGCGCAGATGTTTG+CGG 0.481206 1_2:-50926310 Msa0075500:CDS
TTCTTGGGATTGTTTATAGT+GGG 0.486322 1_2:-50926956 Msa0075500:CDS
AGAAACCTCCATGATATCCT+TGG 0.489502 1_2:+50926284 None:intergenic
TCATTCAATGAAAAGGAGCT+TGG 0.491295 1_2:-50927515 Msa0075500:CDS
GCTAATGTTAAGACGGCGAT+GGG 0.491334 1_2:-50927203 Msa0075500:CDS
TTTGGGTAGGTTAGAGAATG+AGG 0.492492 1_2:-50927279 Msa0075500:CDS
GAACGGTTGAAAGAGAGCTT+TGG 0.492632 1_2:-50926405 Msa0075500:CDS
GTTGTTGTTGCTTACAGGTA+AGG 0.496912 1_2:-50926463 Msa0075500:CDS
TGCAAATGAGGTTCCTATGA+AGG 0.499756 1_2:-50924757 Msa0075500:CDS
GATAGTGAGGAGTTAGGGAA+AGG 0.510103 1_2:-50927113 Msa0075500:CDS
TGGTTTGAAATGGGGTGTAG+AGG 0.511003 1_2:+50927675 None:intergenic
CTGCGATTTCGTTGCTGAAG+AGG 0.511189 1_2:-50926557 Msa0075500:CDS
ATGCAACGGTATGTCAGGTT+GGG 0.511251 1_2:+50924689 None:intergenic
TTGGGTAGGTTAGAGAATGA+GGG 0.511672 1_2:-50927278 Msa0075500:CDS
ACGTGGCGGTGTGTCAGGTT+GGG 0.514066 1_2:+50924629 None:intergenic
GATATCATGGAGGTTTCTCT+TGG 0.517703 1_2:-50926279 Msa0075500:CDS
GTTCATAGTTTCATATAGCA+TGG 0.522310 1_2:+50926590 None:intergenic
GATTGTTTATAGTGGGATGG+AGG 0.522341 1_2:-50926949 Msa0075500:CDS
GTTTGAAATGGGGTGTAGAG+GGG 0.522438 1_2:+50927677 None:intergenic
GACGTGGCGGTGTGTCAGGT+TGG 0.523342 1_2:+50924628 None:intergenic
GGAGATACATACGAAGCGAT+TGG 0.525683 1_2:-50927015 Msa0075500:CDS
GCTCAAAGCATTCAGTGAGA+TGG 0.525816 1_2:-50927543 Msa0075500:CDS
TGCGATTTCGTTGCTGAAGA+GGG 0.530007 1_2:-50926556 Msa0075500:CDS
TGCGGTAGCCAAGGATATCA+TGG 0.531067 1_2:-50926292 Msa0075500:CDS
CCGCGGTGTCTCTGCAAATG+AGG 0.535152 1_2:-50924769 Msa0075500:CDS
TGTCTAGGAGAGATTTGAGT+GGG 0.536028 1_2:+50927632 None:intergenic
GAAAGGGAATAGGGATTTAG+CGG 0.537665 1_2:-50927096 Msa0075500:CDS
GCTTACAGGTAAGGTGAAGC+AGG 0.537806 1_2:-50926454 Msa0075500:CDS
GATTGATGCAACGGTATGTC+AGG 0.539517 1_2:+50924684 None:intergenic
GGAAGTTTCTGAGGCATACT+CGG 0.541766 1_2:-50926619 Msa0075500:CDS
AAACTTTATACCAGTACCAT+AGG 0.543632 1_2:+50924550 None:intergenic
GATGCAACGGTATGTCAGGT+TGG 0.548784 1_2:+50924688 None:intergenic
GAAACTCAATTGCAAGGGAA+TGG 0.548823 1_2:+50924889 None:intergenic
ATGTGTATTATTATTAGGAA+AGG 0.552489 1_2:+50924728 None:intergenic
CCACAAGAGCAGCACTCGGA+GGG 0.552886 1_2:-50926510 Msa0075500:CDS
GGAGGATCATGAGAAGGCGT+TGG 0.552931 1_2:-50926931 Msa0075500:CDS
GGTTGACATGGTTTGAAATG+GGG 0.565019 1_2:+50927667 None:intergenic
TGAGTTGGCTAATGTTAAGA+CGG 0.567694 1_2:-50927210 Msa0075500:CDS
CTATTATGGGATTGATGCAA+CGG 0.570557 1_2:+50924675 None:intergenic
GGCGATGGGGAGGAGAGAAG+AGG 0.570707 1_2:-50927189 Msa0075500:CDS
AGCATGTCAGAATCTTTCAA+AGG 0.573306 1_2:-50926232 Msa0075500:CDS
GGCTAATGTTAAGACGGCGA+TGG 0.573411 1_2:-50927204 Msa0075500:CDS
GGGAGATACGATGAAGCTGT+TGG 0.573991 1_2:-50926810 Msa0075500:CDS
GCTGCTGAAACTCAATTGCA+AGG 0.574173 1_2:+50924883 None:intergenic
AATTGCACAGCATGAAGCAC+AGG 0.576090 1_2:+50927233 None:intergenic
GTTATATCTACAACAATTTG+GGG 0.576788 1_2:-50926362 Msa0075500:CDS
AGGCTTATGGTGATATTGGA+AGG 0.580409 1_2:-50926212 Msa0075500:intron
CTGCTGAAACTCAATTGCAA+GGG 0.582844 1_2:+50924884 None:intergenic
TCCAACGCCTTCAAACAATA+CGG 0.588188 1_2:+50927035 None:intergenic
CTCATTTGCAGAGACACCGC+GGG 0.591950 1_2:+50924770 None:intergenic
TACACCGGTGGAAGTTTCTG+AGG 0.595722 1_2:-50926628 Msa0075500:CDS
ATGTTAAGACGGCGATGGGG+AGG 0.595931 1_2:-50927199 Msa0075500:CDS
GCAGATGTTTGCGGTAGCCA+AGG 0.596662 1_2:-50926301 Msa0075500:CDS
TGGGAGTTACTGGATGCTGC+AGG 0.602801 1_2:+50924648 None:intergenic
AACATCTGCGCTGCTGACTG+AGG 0.607323 1_2:+50926315 None:intergenic
AGATACATACGAAGCGATTG+GGG 0.608554 1_2:-50927013 Msa0075500:CDS
GCTCCCACAAGAGCAGCACT+CGG 0.608859 1_2:-50926514 Msa0075500:CDS
ATAGATGCTTGGGAAAGCCA+TGG 0.619820 1_2:-50924855 Msa0075500:CDS
ATTTGGAAAGTGCTGCTGAA+CGG 0.624374 1_2:-50926422 Msa0075500:CDS
AAGATGAAGCTCGACGAGCG+AGG 0.629333 1_2:+50927753 None:intergenic
TAAACTGTTCGGGATTGACG+TGG 0.629660 1_2:+50924612 None:intergenic
TGGGATGGAGGATCATGAGA+AGG 0.633696 1_2:-50926937 Msa0075500:CDS
GAAGCTTGATCGTGAAGGTG+AGG 0.637522 1_2:-50927468 Msa0075500:CDS
TTTAGCGGAAGCTTATGTTG+CGG 0.637589 1_2:-50927081 Msa0075500:CDS
CCCACAAGAGCAGCACTCGG+AGG 0.640444 1_2:-50926511 Msa0075500:CDS
AAGAGAACAGATTACACCGG+TGG 0.642489 1_2:-50926640 Msa0075500:CDS
CGAATATGATGATTGCTTTG+GGG 0.644617 1_2:-50926830 Msa0075500:CDS
TCAATTGTATCTGCATGATG+TGG 0.648031 1_2:+50926255 None:intergenic
GCGATTGGGGATGAATTCTG+TGG 0.649498 1_2:-50927000 Msa0075500:CDS
ACTGTTCGGGATTGACGTGG+CGG 0.661175 1_2:+50924615 None:intergenic
TTGTCTAGGAGAGATTTGAG+TGG 0.661188 1_2:+50927631 None:intergenic
TTGATGGATGCATCGCGGAG+AGG 0.665367 1_2:+50927722 None:intergenic
TATGCCTCAGAAACTTCCAC+CGG 0.674657 1_2:+50926624 None:intergenic
ATTGGGGATGAATTCTGTGG+AGG 0.693664 1_2:-50926997 Msa0075500:CDS
GTGTATCTGCAAGAATAGGG+TGG 0.702061 1_2:-50926485 Msa0075500:CDS
CCTCATTTGCAGAGACACCG+CGG 0.706770 1_2:+50924769 None:intergenic
CTCTTGTGCTTGTATCAATG+GGG 0.708946 1_2:-50926737 Msa0075500:CDS
TAAAAGAGAACAGATTACAC+CGG 0.715171 1_2:-50926643 Msa0075500:CDS
TTATATCTACAACAATTTGG+GGG 0.722117 1_2:-50926361 Msa0075500:CDS
CTAATGTTAAGACGGCGATG+GGG 0.738436 1_2:-50927202 Msa0075500:CDS
TAGGGTTGATGGATGCATCG+CGG 0.740256 1_2:+50927717 None:intergenic
GGTAGCCAAGGATATCATGG+AGG 0.746203 1_2:-50926289 Msa0075500:CDS
GGTCTGAAGCTTGATCGTGA+AGG 0.746730 1_2:-50927473 Msa0075500:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTACAAAAATATTTAAGAAT+CGG - chr1_2:50927051-50927070 Msa0075500:CDS 10.0%
!! GTCTTAATTATGGTTTAAAT+AGG - chr1_2:50924848-50924867 Msa0075500:CDS 20.0%
!!! CAGTTTAAACATTTAACTTT+TGG - chr1_2:50926099-50926118 Msa0075500:intron 20.0%
!!! AACAATTATTTTGAGACTTA+AGG - chr1_2:50926159-50926178 Msa0075500:intron 20.0%
!!! ATAAAACTTAGTTTGATAGA+TGG + chr1_2:50926618-50926637 None:intergenic 20.0%
!! ACTTATTTCATTATTTAGAC+CGG - chr1_2:50926919-50926938 Msa0075500:CDS 20.0%
!! AATTCAAGTACATACTATAT+AGG + chr1_2:50927033-50927052 None:intergenic 20.0%
!! AAAAATATTTAAGAATCGGA+AGG - chr1_2:50927055-50927074 Msa0075500:CDS 20.0%
!!! TTCATGTTTTCCTAAAATAT+TGG - chr1_2:50927271-50927290 Msa0075500:CDS 20.0%
!! TGTGTATTATTATTAGGAAA+GGG + chr1_2:50927465-50927484 None:intergenic 20.0%
!! ATGTGTATTATTATTAGGAA+AGG + chr1_2:50927466-50927485 None:intergenic 20.0%
!!! AATTATATAAGCTAGCTTAT+TGG + chr1_2:50927678-50927697 None:intergenic 20.0%
!!! TTAGTTTTATTTGACTGAAT+TGG - chr1_2:50927713-50927732 Msa0075500:CDS 20.0%
! GGAAATTTCATTCAATGAAA+AGG - chr1_2:50924669-50924688 Msa0075500:CDS 25.0%
!! TTAATGGGTAGTCTTAATTA+TGG - chr1_2:50924838-50924857 Msa0075500:CDS 25.0%
! AATAGGTTTAGTGATAGTTT+AGG - chr1_2:50924865-50924884 Msa0075500:CDS 25.0%
! ATAGGTTTAGTGATAGTTTA+GGG - chr1_2:50924866-50924885 Msa0075500:CDS 25.0%
!! TAGTTTAGGGTATCTTAATA+AGG - chr1_2:50924879-50924898 Msa0075500:CDS 25.0%
! GTATCTTAATAAGGCTAATA+GGG - chr1_2:50924888-50924907 Msa0075500:CDS 25.0%
! TGGTTATATCTACAACAATT+TGG - chr1_2:50925827-50925846 Msa0075500:intron 25.0%
! GGTTATATCTACAACAATTT+GGG - chr1_2:50925828-50925847 Msa0075500:intron 25.0%
! GTTATATCTACAACAATTTG+GGG - chr1_2:50925829-50925848 Msa0075500:intron 25.0%
! TTATATCTACAACAATTTGG+GGG - chr1_2:50925830-50925849 Msa0075500:intron 25.0%
!!! ATTATTTTGAGACTTAAGGA+TGG - chr1_2:50926163-50926182 Msa0075500:intron 25.0%
! CTGCTTTCAAAAGAAAAATT+AGG - chr1_2:50926285-50926304 Msa0075500:CDS 25.0%
! TTTCATATAAGTAGCTATGT+TGG - chr1_2:50926404-50926423 Msa0075500:CDS 25.0%
!!! ATCAATGTTTTGCTTGTTTT+TGG - chr1_2:50926884-50926903 Msa0075500:CDS 25.0%
!! AACTGTATATGTTTTTCCAA+CGG - chr1_2:50927243-50927262 Msa0075500:CDS 25.0%
GGTATCTTAATAAGGCTAAT+AGG - chr1_2:50924887-50924906 Msa0075500:CDS 30.0%
! TAATAAGGCTAATAGGGTTT+TGG - chr1_2:50924894-50924913 Msa0075500:intron 30.0%
! AATAAGGCTAATAGGGTTTT+GGG - chr1_2:50924895-50924914 Msa0075500:intron 30.0%
!!! TGTTGCGGTTTTGAATTTTA+AGG - chr1_2:50925125-50925144 Msa0075500:intron 30.0%
TTCTTGGGATTGTTTATAGT+GGG - chr1_2:50925235-50925254 Msa0075500:intron 30.0%
GAAGAATTGGAATCTTAGTT+CGG - chr1_2:50925311-50925330 Msa0075500:intron 30.0%
AAAAGTTTGCAGACTGTAAA+AGG - chr1_2:50925496-50925515 Msa0075500:intron 30.0%
AGGTGTTTAGAGATTTCTAT+TGG - chr1_2:50925516-50925535 Msa0075500:intron 30.0%
GGTGTTTAGAGATTTCTATT+GGG - chr1_2:50925517-50925536 Msa0075500:intron 30.0%
TAAAAGAGAACAGATTACAC+CGG - chr1_2:50925548-50925567 Msa0075500:intron 30.0%
GTTCATAGTTTCATATAGCA+TGG + chr1_2:50925604-50925623 None:intergenic 30.0%
TAACCAACTCCAAAATGTTT+GGG + chr1_2:50925813-50925832 None:intergenic 30.0%
ATAACCAACTCCAAAATGTT+TGG + chr1_2:50925814-50925833 None:intergenic 30.0%
AACCAAGAGAAACAATATCA+GGG + chr1_2:50926035-50926054 None:intergenic 30.0%
AAACCAAGAGAAACAATATC+AGG + chr1_2:50926036-50926055 None:intergenic 30.0%
!! TTGTTGATTCTGCAAACAAT+TGG - chr1_2:50926054-50926073 Msa0075500:intron 30.0%
!! ATTCTGCAAACAATTGGTTT+TGG - chr1_2:50926060-50926079 Msa0075500:intron 30.0%
!!! TTCTGCAAACAATTGGTTTT+GGG - chr1_2:50926061-50926080 Msa0075500:intron 30.0%
TCTCAAAATAATTGTTCCAC+TGG + chr1_2:50926155-50926174 None:intergenic 30.0%
AAGAAAAATTAGGCTGTGTT+TGG - chr1_2:50926295-50926314 Msa0075500:CDS 30.0%
TTATGAGCATAGCATGAATA+AGG + chr1_2:50926556-50926575 None:intergenic 30.0%
ATCTTGAGTACAAAGAGTTA+TGG - chr1_2:50926808-50926827 Msa0075500:CDS 30.0%
AGCACATTATCCAAAAACAA+GGG + chr1_2:50927183-50927202 None:intergenic 30.0%
AAGCACATTATCCAAAAACA+AGG + chr1_2:50927184-50927203 None:intergenic 30.0%
! GAAAACATGAATTTTTCCGT+TGG + chr1_2:50927262-50927281 None:intergenic 30.0%
GCTGCATGTGTATTATTATT+AGG + chr1_2:50927471-50927490 None:intergenic 30.0%
AAAAAATGCTGTTGTGAAAG+AGG + chr1_2:50927613-50927632 None:intergenic 30.0%
!!! CATTTTTTGATGAATGCCTA+TGG - chr1_2:50927625-50927644 Msa0075500:CDS 30.0%
AAACTTTATACCAGTACCAT+AGG + chr1_2:50927644-50927663 None:intergenic 30.0%
! ATAAGCTAGCTTATTGGTAT+TGG + chr1_2:50927672-50927691 None:intergenic 30.0%
! GAGATTTTACAGATTTGTGT+AGG - chr1_2:50927747-50927766 Msa0075500:CDS 30.0%
! TCAATGATTTTGCGTTGTCT+AGG + chr1_2:50924577-50924596 None:intergenic 35.0%
! GAATGCTTTGAGCATTTCTT+CGG + chr1_2:50924641-50924660 None:intergenic 35.0%
TCATTCAATGAAAAGGAGCT+TGG - chr1_2:50924676-50924695 Msa0075500:CDS 35.0%
GGTTTAGCTGCATTGAAAAT+TGG - chr1_2:50924697-50924716 Msa0075500:CDS 35.0%
!! GCAAATTCAAGAGCTTTTTC+AGG + chr1_2:50924751-50924770 None:intergenic 35.0%
AACTGCAAACTCATAGCATA+AGG + chr1_2:50924820-50924839 None:intergenic 35.0%
TGCTATGAGTTTGCAGTTAA+TGG - chr1_2:50924822-50924841 Msa0075500:CDS 35.0%
GCTATGAGTTTGCAGTTAAT+GGG - chr1_2:50924823-50924842 Msa0075500:CDS 35.0%
!! GTGTTTGTGTTGATGATGTT+AGG - chr1_2:50924935-50924954 Msa0075500:intron 35.0%
! TGAGTTGGCTAATGTTAAGA+CGG - chr1_2:50924981-50925000 Msa0075500:intron 35.0%
! GATTAAGGAGATGACTTTTG+AGG - chr1_2:50925053-50925072 Msa0075500:intron 35.0%
!!! TGCGGTTTTGAATTTTAAGG+AGG - chr1_2:50925128-50925147 Msa0075500:intron 35.0%
CTTCTTGGGATTGTTTATAG+TGG - chr1_2:50925234-50925253 Msa0075500:intron 35.0%
!! CACAGAGGATTTTGAAGAAT+TGG - chr1_2:50925298-50925317 Msa0075500:intron 35.0%
TGCGAATATGATGATTGCTT+TGG - chr1_2:50925359-50925378 Msa0075500:intron 35.0%
GCGAATATGATGATTGCTTT+GGG - chr1_2:50925360-50925379 Msa0075500:intron 35.0%
CGAATATGATGATTGCTTTG+GGG - chr1_2:50925361-50925380 Msa0075500:intron 35.0%
GAAGTGTATCTGCAAGAATA+GGG - chr1_2:50925703-50925722 Msa0075500:intron 35.0%
TCAATTGTATCTGCATGATG+TGG + chr1_2:50925939-50925958 None:intergenic 35.0%
AGCATGTCAGAATCTTTCAA+AGG - chr1_2:50925959-50925978 Msa0075500:intron 35.0%
CAGAATCTTTCAAAGGCTTA+TGG - chr1_2:50925966-50925985 Msa0075500:intron 35.0%
TCAAAGGCTTATGGTGATAT+TGG - chr1_2:50925975-50925994 Msa0075500:intron 35.0%
TATGGTGATATTGGAAGGTA+TGG - chr1_2:50925984-50926003 Msa0075500:intron 35.0%
! TTCCCTGATATTGTTTCTCT+TGG - chr1_2:50926030-50926049 Msa0075500:intron 35.0%
TGGACATATACCTAATAGTG+TGG - chr1_2:50926119-50926138 Msa0075500:intron 35.0%
GGACATATACCTAATAGTGT+GGG - chr1_2:50926120-50926139 Msa0075500:intron 35.0%
AATCTGAATCCCACACTATT+AGG + chr1_2:50926132-50926151 None:intergenic 35.0%
TCTGACATAAAATAGAGTGC+AGG - chr1_2:50926217-50926236 Msa0075500:CDS 35.0%
CTGACATAAAATAGAGTGCA+GGG - chr1_2:50926218-50926237 Msa0075500:CDS 35.0%
TAAGAACTAGCAACAGTGTT+TGG + chr1_2:50926494-50926513 None:intergenic 35.0%
! TGTTTGGAATGGCTTATTTG+AGG + chr1_2:50926530-50926549 None:intergenic 35.0%
TCAAATAAGCCATTCCAAAC+AGG - chr1_2:50926529-50926548 Msa0075500:CDS 35.0%
AGGTAGACATGGAAACTAAA+AGG + chr1_2:50926580-50926599 None:intergenic 35.0%
AACTATATGAGAGGTAGACA+TGG + chr1_2:50926591-50926610 None:intergenic 35.0%
GATGGAAAGAACTATATGAG+AGG + chr1_2:50926600-50926619 None:intergenic 35.0%
GCAATTCCATGTGCAATTAT+GGG + chr1_2:50926840-50926859 None:intergenic 35.0%
AGCAATTCCATGTGCAATTA+TGG + chr1_2:50926841-50926860 None:intergenic 35.0%
ATATGCAATTGAGCTCGAAA+TGG + chr1_2:50926946-50926965 None:intergenic 35.0%
! CGGAAGGTATAATTTAGACT+TGG - chr1_2:50927071-50927090 Msa0075500:CDS 35.0%
! AATTTAGACTTGGTTGTTCC+CGG - chr1_2:50927081-50927100 Msa0075500:CDS 35.0%
!!! TTGTTTCTGTCCCTTGTTTT+TGG - chr1_2:50927170-50927189 Msa0075500:CDS 35.0%
! GGCTGCAATTCCAATATTTT+AGG + chr1_2:50927284-50927303 None:intergenic 35.0%
CAATTAAAGAAAAAAGCCCG+CGG - chr1_2:50927405-50927424 Msa0075500:CDS 35.0%
CTATTATGGGATTGATGCAA+CGG + chr1_2:50927519-50927538 None:intergenic 35.0%
TATTTGACTGAATTGGTTGC+TGG - chr1_2:50927720-50927739 Msa0075500:CDS 35.0%
! GTTTGTTGCGGGTGAAAATA+GGG + chr1_2:50924495-50924514 None:intergenic 40.0%
! GGTTGACATGGTTTGAAATG+GGG + chr1_2:50924527-50924546 None:intergenic 40.0%
! GGGTTGACATGGTTTGAAAT+GGG + chr1_2:50924528-50924547 None:intergenic 40.0%
AGGGTTGACATGGTTTGAAA+TGG + chr1_2:50924529-50924548 None:intergenic 40.0%
! TTTTTGGATGAGGGTTGACA+TGG + chr1_2:50924539-50924558 None:intergenic 40.0%
!! TTGAGTGGGTTTTTGGATGA+GGG + chr1_2:50924548-50924567 None:intergenic 40.0%
!! TTTGAGTGGGTTTTTGGATG+AGG + chr1_2:50924549-50924568 None:intergenic 40.0%
!! GAGAGATTTGAGTGGGTTTT+TGG + chr1_2:50924555-50924574 None:intergenic 40.0%
TGTCTAGGAGAGATTTGAGT+GGG + chr1_2:50924562-50924581 None:intergenic 40.0%
TTGTCTAGGAGAGATTTGAG+TGG + chr1_2:50924563-50924582 None:intergenic 40.0%
!!! CATTTCTTCGGTTGTTTTGG+CGG + chr1_2:50924629-50924648 None:intergenic 40.0%
! GAGCATTTCTTCGGTTGTTT+TGG + chr1_2:50924632-50924651 None:intergenic 40.0%
TTTGGGTAGGTTAGAGAATG+AGG - chr1_2:50924912-50924931 Msa0075500:intron 40.0%
TTGGGTAGGTTAGAGAATGA+GGG - chr1_2:50924913-50924932 Msa0075500:intron 40.0%
TCATGCTGTGCAATTTGAGT+TGG - chr1_2:50924966-50924985 Msa0075500:intron 40.0%
!! AGAGAATCTTCGGAAGTGTT+TGG - chr1_2:50925029-50925048 Msa0075500:intron 40.0%
!! TCGGAAGTGTTTGGAGATTA+AGG - chr1_2:50925038-50925057 Msa0075500:intron 40.0%
!! GACTTTTGAGGAAGATAGTG+AGG - chr1_2:50925065-50925084 Msa0075500:intron 40.0%
AGGAAGATAGTGAGGAGTTA+GGG - chr1_2:50925073-50925092 Msa0075500:intron 40.0%
ATAGTGAGGAGTTAGGGAAA+GGG - chr1_2:50925079-50925098 Msa0075500:intron 40.0%
GAAAGGGAATAGGGATTTAG+CGG - chr1_2:50925095-50925114 Msa0075500:intron 40.0%
TTTAGCGGAAGCTTATGTTG+CGG - chr1_2:50925110-50925129 Msa0075500:intron 40.0%
TCCAACGCCTTCAAACAATA+CGG + chr1_2:50925159-50925178 None:intergenic 40.0%
GAGATACATACGAAGCGATT+GGG - chr1_2:50925177-50925196 Msa0075500:intron 40.0%
AGATACATACGAAGCGATTG+GGG - chr1_2:50925178-50925197 Msa0075500:intron 40.0%
CACATGATAGGAAGCTTCTT+GGG - chr1_2:50925220-50925239 Msa0075500:intron 40.0%
! TGGGATTGTTTATAGTGGGA+TGG - chr1_2:50925239-50925258 Msa0075500:intron 40.0%
! GATTGTTTATAGTGGGATGG+AGG - chr1_2:50925242-50925261 Msa0075500:intron 40.0%
AGCTCTTGTGCTTGTATCAA+TGG - chr1_2:50925452-50925471 Msa0075500:intron 40.0%
GCTCTTGTGCTTGTATCAAT+GGG - chr1_2:50925453-50925472 Msa0075500:intron 40.0%
CTCTTGTGCTTGTATCAATG+GGG - chr1_2:50925454-50925473 Msa0075500:intron 40.0%
! GGAAGTGTATCTGCAAGAAT+AGG - chr1_2:50925702-50925721 Msa0075500:intron 40.0%
! GTTGTTGTTGCTTACAGGTA+AGG - chr1_2:50925728-50925747 Msa0075500:intron 40.0%
GAAGCAGGCTATTCCTTATT+TGG - chr1_2:50925752-50925771 Msa0075500:intron 40.0%
TCAGCAGCACTTTCCAAATA+AGG + chr1_2:50925768-50925787 None:intergenic 40.0%
!! ATTTGGAAAGTGCTGCTGAA+CGG - chr1_2:50925769-50925788 Msa0075500:intron 40.0%
!! AGCTTTGGTCCCAAACATTT+TGG - chr1_2:50925801-50925820 Msa0075500:intron 40.0%
AGAAACCTCCATGATATCCT+TGG + chr1_2:50925910-50925929 None:intergenic 40.0%
GATATCATGGAGGTTTCTCT+TGG - chr1_2:50925912-50925931 Msa0075500:intron 40.0%
AGGCTTATGGTGATATTGGA+AGG - chr1_2:50925979-50925998 Msa0075500:intron 40.0%
GAATAAGGACCTGTTTGGAA+TGG + chr1_2:50926541-50926560 None:intergenic 40.0%
AGCATGAATAAGGACCTGTT+TGG + chr1_2:50926546-50926565 None:intergenic 40.0%
GAGCACAGAAGAGAATATAG+TGG + chr1_2:50926670-50926689 None:intergenic 40.0%
! TCACCAAGAGAGTTCTGATT+TGG - chr1_2:50926688-50926707 Msa0075500:CDS 40.0%
ACACCAAATCAGAACTCTCT+TGG + chr1_2:50926694-50926713 None:intergenic 40.0%
TCAACGTAACATACTGTGAG+TGG - chr1_2:50927136-50927155 Msa0075500:CDS 40.0%
GAAACTCAATTGCAAGGGAA+TGG + chr1_2:50927305-50927324 None:intergenic 40.0%
CTGCTGAAACTCAATTGCAA+GGG + chr1_2:50927310-50927329 None:intergenic 40.0%
AGCAGCAAGTTATAGATGCT+TGG - chr1_2:50927325-50927344 Msa0075500:CDS 40.0%
GCAGCAAGTTATAGATGCTT+GGG - chr1_2:50927326-50927345 Msa0075500:CDS 40.0%
TGCAAATGAGGTTCCTATGA+AGG - chr1_2:50927434-50927453 Msa0075500:CDS 40.0%
!! TATGTCAGGTTGGGAGTTAT+TGG + chr1_2:50927496-50927515 None:intergenic 40.0%
TGCTGCAGGTGTACTATTAT+GGG + chr1_2:50927532-50927551 None:intergenic 40.0%
ATGCTGCAGGTGTACTATTA+TGG + chr1_2:50927533-50927552 None:intergenic 40.0%
AGGATGTCTGCTAAACTGTT+CGG + chr1_2:50927593-50927612 None:intergenic 40.0%
TTGATGAATGCCTATGGTAC+TGG - chr1_2:50927631-50927650 Msa0075500:CDS 40.0%
!! GGTTTGTTGCGGGTGAAAAT+AGG + chr1_2:50924496-50924515 None:intergenic 45.0%
! GTTTGAAATGGGGTGTAGAG+GGG + chr1_2:50924517-50924536 None:intergenic 45.0%
! GGTTTGAAATGGGGTGTAGA+GGG + chr1_2:50924518-50924537 None:intergenic 45.0%
! TGGTTTGAAATGGGGTGTAG+AGG + chr1_2:50924519-50924538 None:intergenic 45.0%
! GCTCAAAGCATTCAGTGAGA+TGG - chr1_2:50924648-50924667 Msa0075500:CDS 45.0%
!!! AGGCTAATAGGGTTTTGGGT+AGG - chr1_2:50924899-50924918 Msa0075500:intron 45.0%
AATTGCACAGCATGAAGCAC+AGG + chr1_2:50924961-50924980 None:intergenic 45.0%
GCTAATGTTAAGACGGCGAT+GGG - chr1_2:50924988-50925007 Msa0075500:intron 45.0%
CTAATGTTAAGACGGCGATG+GGG - chr1_2:50924989-50925008 Msa0075500:intron 45.0%
!! AAGAGGCGCTAGAGAATCTT+CGG - chr1_2:50925019-50925038 Msa0075500:intron 45.0%
GAGGAAGATAGTGAGGAGTT+AGG - chr1_2:50925072-50925091 Msa0075500:intron 45.0%
GATAGTGAGGAGTTAGGGAA+AGG - chr1_2:50925078-50925097 Msa0075500:intron 45.0%
AGGAGTTAGGGAAAGGGAAT+AGG - chr1_2:50925085-50925104 Msa0075500:intron 45.0%
GGAGTTAGGGAAAGGGAATA+GGG - chr1_2:50925086-50925105 Msa0075500:intron 45.0%
! TCCGTATTGTTTGAAGGCGT+TGG - chr1_2:50925155-50925174 Msa0075500:intron 45.0%
GGAGATACATACGAAGCGAT+TGG - chr1_2:50925176-50925195 Msa0075500:intron 45.0%
ATTGGGGATGAATTCTGTGG+AGG - chr1_2:50925194-50925213 Msa0075500:intron 45.0%
GCACATGATAGGAAGCTTCT+TGG - chr1_2:50925219-50925238 Msa0075500:intron 45.0%
!!! AGCAGAATGTTTTGGCACAG+AGG - chr1_2:50925283-50925302 Msa0075500:intron 45.0%
!! GGGGAAAGCGTTATGTAATC+AGG - chr1_2:50925473-50925492 Msa0075500:intron 45.0%
AAGAGAACAGATTACACCGG+TGG - chr1_2:50925551-50925570 Msa0075500:intron 45.0%
TATGCCTCAGAAACTTCCAC+CGG + chr1_2:50925570-50925589 None:intergenic 45.0%
!! GGAAGTTTCTGAGGCATACT+CGG - chr1_2:50925572-50925591 Msa0075500:intron 45.0%
TGCGATTTCGTTGCTGAAGA+GGG - chr1_2:50925635-50925654 Msa0075500:intron 45.0%
GTGTATCTGCAAGAATAGGG+TGG - chr1_2:50925706-50925725 Msa0075500:intron 45.0%
GAACGGTTGAAAGAGAGCTT+TGG - chr1_2:50925786-50925805 Msa0075500:intron 45.0%
!!! GGTCCCAAACATTTTGGAGT+TGG - chr1_2:50925807-50925826 Msa0075500:intron 45.0%
CAATTGAGCTCGAAATGGAC+CGG + chr1_2:50926941-50926960 None:intergenic 45.0%
TTTACGAGAACCTCTGAACC+GGG + chr1_2:50927102-50927121 None:intergenic 45.0%
CTTTACGAGAACCTCTGAAC+CGG + chr1_2:50927103-50927122 None:intergenic 45.0%
GCTGCTGAAACTCAATTGCA+AGG + chr1_2:50927311-50927330 None:intergenic 45.0%
ATAGATGCTTGGGAAAGCCA+TGG - chr1_2:50927336-50927355 Msa0075500:CDS 45.0%
ATGCAACGGTATGTCAGGTT+GGG + chr1_2:50927505-50927524 None:intergenic 45.0%
GATTGATGCAACGGTATGTC+AGG + chr1_2:50927510-50927529 None:intergenic 45.0%
TAAACTGTTCGGGATTGACG+TGG + chr1_2:50927582-50927601 None:intergenic 45.0%
GGATGTCTGCTAAACTGTTC+GGG + chr1_2:50927592-50927611 None:intergenic 45.0%
ACGAGCGAGGTGAGAGAAAA+AGG + chr1_2:50924428-50924447 None:intergenic 50.0%
!! TAGGGTTGATGGATGCATCG+CGG + chr1_2:50924477-50924496 None:intergenic 50.0%
GCGGGTGAAAATAGGGTTGA+TGG + chr1_2:50924488-50924507 None:intergenic 50.0%
! GGTCTGAAGCTTGATCGTGA+AGG - chr1_2:50924718-50924737 Msa0075500:CDS 50.0%
GAAGCTTGATCGTGAAGGTG+AGG - chr1_2:50924723-50924742 Msa0075500:CDS 50.0%
GGCTAATGTTAAGACGGCGA+TGG - chr1_2:50924987-50925006 Msa0075500:intron 50.0%
GGCGCTTCCGTATTGTTTGA+AGG - chr1_2:50925149-50925168 Msa0075500:intron 50.0%
GCGATTGGGGATGAATTCTG+TGG - chr1_2:50925191-50925210 Msa0075500:intron 50.0%
CTGTGGAGGTTGCACATGAT+AGG - chr1_2:50925208-50925227 Msa0075500:intron 50.0%
TGGGATGGAGGATCATGAGA+AGG - chr1_2:50925254-50925273 Msa0075500:intron 50.0%
!! GGCGTTGGAGCAGAATGTTT+TGG - chr1_2:50925275-50925294 Msa0075500:intron 50.0%
GGGAGATACGATGAAGCTGT+TGG - chr1_2:50925381-50925400 Msa0075500:intron 50.0%
TACACCGGTGGAAGTTTCTG+AGG - chr1_2:50925563-50925582 Msa0075500:intron 50.0%
CTGCGATTTCGTTGCTGAAG+AGG - chr1_2:50925634-50925653 Msa0075500:intron 50.0%
! GGGTGGTTGTTGTTGCTTAC+AGG - chr1_2:50925723-50925742 Msa0075500:intron 50.0%
GCTTACAGGTAAGGTGAAGC+AGG - chr1_2:50925737-50925756 Msa0075500:intron 50.0%
! GGGGGCAGCATATTTAGAGT+TGG - chr1_2:50925848-50925867 Msa0075500:intron 50.0%
TGCGGTAGCCAAGGATATCA+TGG - chr1_2:50925899-50925918 Msa0075500:intron 50.0%
GGTAGCCAAGGATATCATGG+AGG - chr1_2:50925902-50925921 Msa0075500:intron 50.0%
GTGTGGGATTCAGATTCCAG+TGG - chr1_2:50926136-50926155 Msa0075500:intron 50.0%
CCATGTGCAATTATGGGCTC+AGG + chr1_2:50926834-50926853 None:intergenic 50.0%
CCTGAGCCCATAATTGCACA+TGG - chr1_2:50926831-50926850 Msa0075500:CDS 50.0%
CGGTTCAGAGGTTCTCGTAA+AGG - chr1_2:50927101-50927120 Msa0075500:CDS 50.0%
CTTCTTCTGCACTTGCTCCA+TGG + chr1_2:50927356-50927375 None:intergenic 50.0%
GGAAAGGGAAGAGCCTTCAT+AGG + chr1_2:50927450-50927469 None:intergenic 50.0%
GATGCAACGGTATGTCAGGT+TGG + chr1_2:50927506-50927525 None:intergenic 50.0%
!! TGTGTCAGGTTGGGAGTTAC+TGG + chr1_2:50927556-50927575 None:intergenic 50.0%
AAGATGAAGCTCGACGAGCG+AGG + chr1_2:50924441-50924460 None:intergenic 55.0%
! TTGATGGATGCATCGCGGAG+AGG + chr1_2:50924472-50924491 None:intergenic 55.0%
!! GGTGTAGAGGGGTTTGTTGC+GGG + chr1_2:50924506-50924525 None:intergenic 55.0%
!! GGGTGTAGAGGGGTTTGTTG+CGG + chr1_2:50924507-50924526 None:intergenic 55.0%
ATGTTAAGACGGCGATGGGG+AGG - chr1_2:50924992-50925011 Msa0075500:intron 55.0%
! GGAGGATCATGAGAAGGCGT+TGG - chr1_2:50925260-50925279 Msa0075500:intron 55.0%
! AACATCTGCGCTGCTGACTG+AGG + chr1_2:50925879-50925898 None:intergenic 55.0%
GTCAGCAGCGCAGATGTTTG+CGG - chr1_2:50925881-50925900 Msa0075500:intron 55.0%
GCAGATGTTTGCGGTAGCCA+AGG - chr1_2:50925890-50925909 Msa0075500:intron 55.0%
CTTGGTTGTTCCCGGTTCAG+AGG - chr1_2:50927089-50927108 Msa0075500:CDS 55.0%
CTCATTTGCAGAGACACCGC+GGG + chr1_2:50927424-50927443 None:intergenic 55.0%
CCTCATTTGCAGAGACACCG+CGG + chr1_2:50927425-50927444 None:intergenic 55.0%
TGGGAGTTACTGGATGCTGC+AGG + chr1_2:50927546-50927565 None:intergenic 55.0%
ACTGTTCGGGATTGACGTGG+CGG + chr1_2:50927579-50927598 None:intergenic 55.0%
GCTCCCACAAGAGCAGCACT+CGG - chr1_2:50925677-50925696 Msa0075500:intron 60.0%
! CCTCCGAGTGCTGCTCTTGT+GGG + chr1_2:50925683-50925702 None:intergenic 60.0%
CCACAAGAGCAGCACTCGGA+GGG - chr1_2:50925681-50925700 Msa0075500:intron 60.0%
CCGCGGTGTCTCTGCAAATG+AGG - chr1_2:50927422-50927441 Msa0075500:CDS 60.0%
ACGTGGCGGTGTGTCAGGTT+GGG + chr1_2:50927565-50927584 None:intergenic 60.0%
GATTGACGTGGCGGTGTGTC+AGG + chr1_2:50927570-50927589 None:intergenic 60.0%
GGCGATGGGGAGGAGAGAAG+AGG - chr1_2:50925002-50925021 Msa0075500:intron 65.0%
CCCACAAGAGCAGCACTCGG+AGG - chr1_2:50925680-50925699 Msa0075500:intron 65.0%
! CCCTCCGAGTGCTGCTCTTG+TGG + chr1_2:50925684-50925703 None:intergenic 65.0%
GACGTGGCGGTGTGTCAGGT+TGG + chr1_2:50927566-50927585 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 50924400 50927813 50924400 ID=Msa0075500;Name=Msa0075500
chr1_2 mRNA 50924400 50927813 50924400 ID=Msa0075500-mRNA-1;Parent=Msa0075500;Name=Msa0075500-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.5|1|1|1|2|211|633
chr1_2 exon 50924400 50924911 50924400 ID=Msa0075500-mRNA-1:exon:15670;Parent=Msa0075500-mRNA-1
chr1_2 exon 50926213 50927813 50926213 ID=Msa0075500-mRNA-1:exon:15669;Parent=Msa0075500-mRNA-1
chr1_2 CDS 50926213 50927813 50926213 ID=Msa0075500-mRNA-1:cds;Parent=Msa0075500-mRNA-1
chr1_2 CDS 50924611 50924911 50924611 ID=Msa0075500-mRNA-1:cds;Parent=Msa0075500-mRNA-1
chr1_2 three_prime_UTR 50924400 50924610 50924400 ID=Msa0075500-mRNA-1:three_prime_utr;Parent=Msa0075500-mRNA-1
Gene Sequence

>Msa0075500

ATGAGAAAACTCTTGAATTCTCTCACCTTTTTCTCTCACCTCGCTCGTCGAGCTTCATCTTCTCTCTCTCCTCTCCGCGATGCATCCATCAACCCTATTTTCACCCGCAACAAACCCCTCTACACCCCATTTCAAACCATGTCAACCCTCATCCAAAAACCCACTCAAATCTCTCCTAGACAACGCAAAATCATTGAAAAATCGCATCTTGAAGAAGCTTTTGAGTCCGCCAAAACAACCGAAGAAATGCTCAAAGCATTCAGTGAGATGGAAATTTCATTCAATGAAAAGGAGCTTGGTTTAGCTGCATTGAAAATTGGTCTGAAGCTTGATCGTGAAGGTGAGGATCCTGAAAAAGCTCTTGAATTTGCTAATAGAGCTTTGAAAGTGTTTGAAAATGAAAAGAAAGATTCTTTTCCTTATGCTATGAGTTTGCAGTTAATGGGTAGTCTTAATTATGGTTTAAATAGGTTTAGTGATAGTTTAGGGTATCTTAATAAGGCTAATAGGGTTTTGGGTAGGTTAGAGAATGAGGGTGTTTGTGTTGATGATGTTAGGCCTGTGCTTCATGCTGTGCAATTTGAGTTGGCTAATGTTAAGACGGCGATGGGGAGGAGAGAAGAGGCGCTAGAGAATCTTCGGAAGTGTTTGGAGATTAAGGAGATGACTTTTGAGGAAGATAGTGAGGAGTTAGGGAAAGGGAATAGGGATTTAGCGGAAGCTTATGTTGCGGTTTTGAATTTTAAGGAGGCGCTTCCGTATTGTTTGAAGGCGTTGGAGATACATACGAAGCGATTGGGGATGAATTCTGTGGAGGTTGCACATGATAGGAAGCTTCTTGGGATTGTTTATAGTGGGATGGAGGATCATGAGAAGGCGTTGGAGCAGAATGTTTTGGCACAGAGGATTTTGAAGAATTGGAATCTTAGTTCGGATTTGTTGCGCGCTGAAGTTGATGCTGCGAATATGATGATTGCTTTGGGGAGATACGATGAAGCTGTTGGTACTTTGAAGAACGCTGTGAATCAGACTGAGAAAGATAGTGAGACTCGAGCTCTTGTGCTTGTATCAATGGGGAAAGCGTTATGTAATCAGGAAAAGTTTGCAGACTGTAAAAGGTGTTTAGAGATTTCTATTGGGATTCTTGATAAAAGAGAACAGATTACACCGGTGGAAGTTTCTGAGGCATACTCGGAGATATCCATGCTATATGAAACTATGAACGAGTTCGAAACTGCGATTTCGTTGCTGAAGAGGGCACTAGCTTTGCTCGAGAAGCTCCCACAAGAGCAGCACTCGGAGGGAAGTGTATCTGCAAGAATAGGGTGGTTGTTGTTGCTTACAGGTAAGGTGAAGCAGGCTATTCCTTATTTGGAAAGTGCTGCTGAACGGTTGAAAGAGAGCTTTGGTCCCAAACATTTTGGAGTTGGTTATATCTACAACAATTTGGGGGCAGCATATTTAGAGTTGGATAGACCTCAGTCAGCAGCGCAGATGTTTGCGGTAGCCAAGGATATCATGGAGGTTTCTCTTGGTCCACATCATGCAGATACAATTGAAGCATGTCAGAATCTTTCAAAGGCTTATGGTGATATTGGAAGCCATTCCCTTGCAATTGAGTTTCAGCAGCAAGTTATAGATGCTTGGGAAAGCCATGGAGCAAGTGCAGAAGAAGAACTAAGAGAAGCTCAGCGACTACTCGAACAATTAAAGAAAAAAGCCCGCGGTGTCTCTGCAAATGAGGTTCCTATGAAGGCTCTTCCCTTTCCTAATAATAATACACATGCAGCATCCAATAACTCCCAACCTGACATACCGTTGCATCAATCCCATAATAGTACACCTGCAGCATCCAGTAACTCCCAACCTGACACACCGCCACGTCAATCCCGAACAGTTTAG

Protein sequence

>Msa0075500

MRKLLNSLTFFSHLARRASSSLSPLRDASINPIFTRNKPLYTPFQTMSTLIQKPTQISPRQRKIIEKSHLEEAFESAKTTEEMLKAFSEMEISFNEKELGLAALKIGLKLDREGEDPEKALEFANRALKVFENEKKDSFPYAMSLQLMGSLNYGLNRFSDSLGYLNKANRVLGRLENEGVCVDDVRPVLHAVQFELANVKTAMGRREEALENLRKCLEIKEMTFEEDSEELGKGNRDLAEAYVAVLNFKEALPYCLKALEIHTKRLGMNSVEVAHDRKLLGIVYSGMEDHEKALEQNVLAQRILKNWNLSSDLLRAEVDAANMMIALGRYDEAVGTLKNAVNQTEKDSETRALVLVSMGKALCNQEKFADCKRCLEISIGILDKREQITPVEVSEAYSEISMLYETMNEFETAISLLKRALALLEKLPQEQHSEGSVSARIGWLLLLTGKVKQAIPYLESAAERLKESFGPKHFGVGYIYNNLGAAYLELDRPQSAAQMFAVAKDIMEVSLGPHHADTIEACQNLSKAYGDIGSHSLAIEFQQQVIDAWESHGASAEEELREAQRLLEQLKKKARGVSANEVPMKALPFPNNNTHAASNNSQPDIPLHQSHNSTPAASSNSQPDTPPRQSRTV*