Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1273160 | XP_003626893.1 | 99.278 | 277 | 2 | 0 | 1 | 277 | 1 | 277 | 0.0 | 577 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1273160 | sp|Q9SRS9|CHIP_ARATH | 67.766 | 273 | 85 | 2 | 5 | 276 | 6 | 276 | 6.77e-134 | 382 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1273160 | G7LEE6 | 99.278 | 277 | 2 | 0 | 1 | 277 | 1 | 277 | 0.0 | 577 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0100090 | Msa1273160 | 0.800018 | 1.754398e-48 | -8.615850e-47 |
| Msa1273160 | Msa1407470 | 0.819260 | 1.274851e-52 | -8.615850e-47 |
| Msa0410580 | Msa1273160 | 0.803721 | 3.045137e-49 | -8.615850e-47 |
| Msa1026410 | Msa1273160 | 0.810255 | 1.262210e-50 | -8.615850e-47 |
| Msa0257500 | Msa1273160 | 0.801605 | 8.320321e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1273160 | MtrunA17_Chr8g0338781 | 99.278 | 277 | 2 | 0 | 1 | 277 | 1 | 277 | 0.0 | 577 |
| Msa1273160 | MtrunA17_Chr8g0393041 | 36.000 | 100 | 64 | 0 | 9 | 108 | 477 | 576 | 4.81e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1273160 | AT3G07370.1 | 67.766 | 273 | 85 | 2 | 5 | 276 | 6 | 276 | 6.89e-135 | 382 |
| Msa1273160 | AT2G42810.1 | 27.811 | 169 | 109 | 2 | 6 | 168 | 8 | 169 | 2.01e-12 | 67.4 |
| Msa1273160 | AT2G42810.5 | 27.811 | 169 | 109 | 2 | 6 | 168 | 8 | 169 | 2.01e-12 | 67.4 |
| Msa1273160 | AT2G42810.4 | 27.811 | 169 | 109 | 2 | 6 | 168 | 8 | 169 | 2.01e-12 | 67.4 |
| Msa1273160 | AT2G42810.3 | 34.000 | 100 | 66 | 0 | 6 | 105 | 8 | 107 | 2.86e-12 | 67.0 |
| Msa1273160 | AT2G42810.2 | 34.000 | 100 | 66 | 0 | 6 | 105 | 8 | 107 | 3.00e-12 | 67.0 |
Find 92 sgRNAs with CRISPR-Local
Find 508 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAATGTGAATTGTAGAAAAT+TGG | 0.231847 | 8_3:+6901338 | None:intergenic |
| GTAAAATAAACTGGGACATT+AGG | 0.247761 | 8_3:+6901020 | None:intergenic |
| GGAAGCAGTCCATGAATATT+TGG | 0.256879 | 8_3:-6897772 | Msa1273160:CDS |
| GCACGATTGGTAAAATAAAC+TGG | 0.288065 | 8_3:+6901011 | None:intergenic |
| ATGATTAAGGCTTTGGATCT+TGG | 0.294525 | 8_3:-6898552 | Msa1273160:intron |
| TAGTATCAAACTTGGCCATT+AGG | 0.302713 | 8_3:-6897794 | Msa1273160:CDS |
| GCTATATGGTTGAAGAAATA+TGG | 0.307159 | 8_3:-6898509 | Msa1273160:CDS |
| CATGTTTGTCCAAATATTCA+TGG | 0.335834 | 8_3:+6897763 | None:intergenic |
| TGTTTAAAGTCACAACATTA+AGG | 0.340045 | 8_3:+6897600 | None:intergenic |
| AGTATCAAACTTGGCCATTA+GGG | 0.343618 | 8_3:-6897793 | Msa1273160:CDS |
| TAAAATAAACTGGGACATTA+GGG | 0.349043 | 8_3:+6901021 | None:intergenic |
| AGAAAGGTAACAACGAGTTT+TGG | 0.354531 | 8_3:+6901397 | None:intergenic |
| TGATTAAGGCTTTGGATCTT+GGG | 0.370465 | 8_3:-6898551 | Msa1273160:intron |
| TGTCTCATCGCCGAAGCGTT+TGG | 0.375818 | 8_3:+6901234 | None:intergenic |
| GGCCAATCCAAAGGGCTATA+TGG | 0.380850 | 8_3:-6898523 | Msa1273160:CDS |
| AAACATATGAAGTGTACATA+TGG | 0.398153 | 8_3:-6897582 | Msa1273160:three_prime_UTR |
| AGGAAGGAACCACAGCAAAT+TGG | 0.398578 | 8_3:+6897447 | None:intergenic |
| ATTCTACAGCATAGATGATC+AGG | 0.399333 | 8_3:+6898042 | None:intergenic |
| GCTGGACAGTCATTCTGTTA+AGG | 0.400835 | 8_3:-6900724 | Msa1273160:intron |
| TAGTGAATGGGAGAGGGTTG+AGG | 0.418045 | 8_3:-6900769 | Msa1273160:CDS |
| GTTCATCGTCCCAACGATCA+TGG | 0.422750 | 8_3:-6898449 | Msa1273160:CDS |
| CAGCCTCCAACTGTTTCAAA+TGG | 0.427517 | 8_3:+6898206 | None:intergenic |
| TACTTCCCATTTGAAACAGT+TGG | 0.428647 | 8_3:-6898212 | Msa1273160:CDS |
| TTCATGGACTGCTTCCCTAA+TGG | 0.443363 | 8_3:+6897779 | None:intergenic |
| TCTTCAACCATATAGCCCTT+TGG | 0.445205 | 8_3:+6898516 | None:intergenic |
| CTGCAATTCCCATGATCGTT+GGG | 0.452825 | 8_3:+6898440 | None:intergenic |
| CATCGATGGCGGCATTAAAA+CGG | 0.453965 | 8_3:+6901166 | None:intergenic |
| TGAAATGAGGCCAAACGCTT+CGG | 0.454942 | 8_3:-6901244 | Msa1273160:exon |
| CTAAAAGAATTGTGGAAGAG+AGG | 0.456100 | 8_3:-6897426 | Msa1273160:three_prime_UTR |
| AAATAGAGAAGAAGAAGAAA+CGG | 0.461796 | 8_3:+6901361 | None:intergenic |
| GGAGATAAGATGAGAGATAG+AGG | 0.463250 | 8_3:+6897390 | None:intergenic |
| TTATTTGTAGTGAATGGGAG+AGG | 0.470473 | 8_3:-6900776 | Msa1273160:intron |
| TTTCAGGCACACTATATGTT+GGG | 0.471344 | 8_3:-6899678 | Msa1273160:intron |
| TTGGTTTATTTGTAGTGAAT+GGG | 0.476814 | 8_3:-6900781 | Msa1273160:intron |
| ATTTCAGGCACACTATATGT+TGG | 0.479123 | 8_3:-6899679 | Msa1273160:intron |
| AGCTTGTAAGTCTGCTCTAA+AGG | 0.479880 | 8_3:-6898284 | Msa1273160:CDS |
| AACCATATAGCCCTTTGGAT+TGG | 0.480413 | 8_3:+6898521 | None:intergenic |
| GGCTTTGGATCTTGGGAGAG+GGG | 0.481198 | 8_3:-6898544 | Msa1273160:CDS |
| GATGATGTGTTGTGCAAGAT+TGG | 0.481726 | 8_3:-6897649 | Msa1273160:three_prime_UTR |
| ATAAGATGAGAGATAGAGGT+AGG | 0.481736 | 8_3:+6897394 | None:intergenic |
| TTCATCGTCCCAACGATCAT+GGG | 0.497642 | 8_3:-6898448 | Msa1273160:CDS |
| AAGGCTTTGGATCTTGGGAG+AGG | 0.508023 | 8_3:-6898546 | Msa1273160:CDS |
| ATCACATTACCTTCTGAAGA+TGG | 0.509877 | 8_3:+6897947 | None:intergenic |
| TTCCCATTTGAAACAGTTGG+AGG | 0.511106 | 8_3:-6898209 | Msa1273160:CDS |
| AGGCTTTGGATCTTGGGAGA+GGG | 0.512373 | 8_3:-6898545 | Msa1273160:CDS |
| GTTCCTTCCTAAAAGAATTG+TGG | 0.514532 | 8_3:-6897434 | Msa1273160:three_prime_UTR |
| CATGAATATTTGGACAAACA+TGG | 0.516494 | 8_3:-6897762 | Msa1273160:CDS |
| TTTCTTGGCTCTGAAATGGA+AGG | 0.516542 | 8_3:-6898253 | Msa1273160:CDS |
| TGTGTACACATTTAAGTGCC+TGG | 0.520706 | 8_3:-6897523 | Msa1273160:three_prime_UTR |
| TTCTAGAAGAGCAATTCAGC+TGG | 0.523922 | 8_3:-6900742 | Msa1273160:CDS |
| CGGAGAGTACCGATGAAGAA+AGG | 0.524164 | 8_3:+6901381 | None:intergenic |
| CTCTCATATGTATGTCCACT+AGG | 0.527301 | 8_3:+6897985 | None:intergenic |
| TGGGAGAGGGGCCAATCCAA+AGG | 0.527508 | 8_3:-6898532 | Msa1273160:CDS |
| AAGTTTGATACTAGTTGTGA+TGG | 0.528930 | 8_3:+6897804 | None:intergenic |
| AGCCTCCAACTGTTTCAAAT+GGG | 0.534587 | 8_3:+6898207 | None:intergenic |
| TCGTTGTTACCTTTCTTCAT+CGG | 0.536813 | 8_3:-6901390 | Msa1273160:five_prime_UTR |
| ACCGTCGTTTCGTAAAAGCT+CGG | 0.537573 | 8_3:+6901209 | None:intergenic |
| TTTATTTGACCAATTTGCTG+TGG | 0.538465 | 8_3:-6897456 | Msa1273160:three_prime_UTR |
| TATTTGTAGTGAATGGGAGA+GGG | 0.542095 | 8_3:-6900775 | Msa1273160:intron |
| TCAAGTGGTTCCCTCGTGAT+CGG | 0.543910 | 8_3:+6897828 | None:intergenic |
| GGAAATTAGCAGTTTGTGAG+AGG | 0.550383 | 8_3:-6897703 | Msa1273160:three_prime_UTR |
| GGGAGAGGGGCCAATCCAAA+GGG | 0.558050 | 8_3:-6898531 | Msa1273160:CDS |
| TCTGCAATTCCCATGATCGT+TGG | 0.558743 | 8_3:+6898439 | None:intergenic |
| TAAAAGAATTGTGGAAGAGA+GGG | 0.558914 | 8_3:-6897425 | Msa1273160:three_prime_UTR |
| GAGATGACACAAAGCACGAT+TGG | 0.561900 | 8_3:+6900998 | None:intergenic |
| CACGATTGGTAAAATAAACT+GGG | 0.562887 | 8_3:+6901012 | None:intergenic |
| AGGAATCCGAGAATTGCAAA+AGG | 0.563665 | 8_3:-6899622 | Msa1273160:intron |
| GTGAATTTGATCCGATCACG+AGG | 0.565580 | 8_3:-6897839 | Msa1273160:CDS |
| CAAAGGCAAAATACAAGGAG+TGG | 0.570372 | 8_3:-6898476 | Msa1273160:CDS |
| AGATTAACAGAATATTAAGC+TGG | 0.571582 | 8_3:-6897724 | Msa1273160:exon |
| GTTTGCAAAGGCAAAATACA+AGG | 0.573081 | 8_3:-6898481 | Msa1273160:CDS |
| ATCACAACTAGTATCAAACT+TGG | 0.576212 | 8_3:-6897802 | Msa1273160:CDS |
| CTTCAATAAAGCTGCAGATG+AGG | 0.583603 | 8_3:-6898173 | Msa1273160:CDS |
| ATGAATATTTGGACAAACAT+GGG | 0.585563 | 8_3:-6897761 | Msa1273160:CDS |
| AACCTCAGTGTAAGCATCGA+TGG | 0.588132 | 8_3:+6901152 | None:intergenic |
| ATATTTGGACAAACATGGGT+GGG | 0.588555 | 8_3:-6897757 | Msa1273160:CDS |
| GATTCTTGACCATCTTCAGA+AGG | 0.598500 | 8_3:-6897956 | Msa1273160:intron |
| AGACACATACAGACCTCAGT+TGG | 0.598626 | 8_3:+6898145 | None:intergenic |
| ACATTAGATATAGTGAAATG+AGG | 0.613553 | 8_3:-6901257 | Msa1273160:exon |
| AAAGGCAAAATACAAGGAGT+GGG | 0.625025 | 8_3:-6898475 | Msa1273160:CDS |
| ATGAAATGTTAAGTTTCACC+AGG | 0.625530 | 8_3:+6897505 | None:intergenic |
| GATCCTGTCATTACTCCTAG+TGG | 0.629989 | 8_3:-6898000 | Msa1273160:CDS |
| TGTCCACTAGGAGTAATGAC+AGG | 0.630204 | 8_3:+6897997 | None:intergenic |
| CAGAAACAAGAACATACGAA+AGG | 0.633885 | 8_3:-6899642 | Msa1273160:CDS |
| TTCTACAGCATAGATGATCA+GGG | 0.645474 | 8_3:+6898043 | None:intergenic |
| AATATTTGGACAAACATGGG+TGG | 0.650582 | 8_3:-6897758 | Msa1273160:CDS |
| ACTAGTTGTGATGGATCAAG+TGG | 0.661529 | 8_3:+6897813 | None:intergenic |
| CTCAGTGTAAGCATCGATGG+CGG | 0.679330 | 8_3:+6901155 | None:intergenic |
| CGCCATCGATGCTTACACTG+AGG | 0.684093 | 8_3:-6901154 | Msa1273160:intron |
| AATATGGCAAGAGTTTGCAA+AGG | 0.692026 | 8_3:-6898493 | Msa1273160:CDS |
| TGAATTTGATCCGATCACGA+GGG | 0.713022 | 8_3:-6897838 | Msa1273160:CDS |
| AGATGAGGACATACCAACTG+AGG | 0.725317 | 8_3:-6898158 | Msa1273160:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAATTTGATTTGAAATT+TGG | - | chr8_3:6897893-6897912 | Msa1273160:intron | 10.0% |
| !!! | TTTAATTTGATTTGAAATTT+GGG | - | chr8_3:6897894-6897913 | Msa1273160:intron | 10.0% |
| !! | AATAATGAAATACTATTTAT+AGG | - | chr8_3:6899666-6899685 | Msa1273160:CDS | 10.0% |
| !! | TGACATTAAAATTTAAATAA+TGG | + | chr8_3:6900120-6900139 | None:intergenic | 10.0% |
| !!! | TTTTAATTTGATTTGAAATT+TGG | - | chr8_3:6897893-6897912 | Msa1273160:intron | 10.0% |
| !!! | TTTAATTTGATTTGAAATTT+GGG | - | chr8_3:6897894-6897913 | Msa1273160:intron | 10.0% |
| !! | AATAATGAAATACTATTTAT+AGG | - | chr8_3:6899666-6899685 | Msa1273160:CDS | 10.0% |
| !! | TGACATTAAAATTTAAATAA+TGG | + | chr8_3:6900120-6900139 | None:intergenic | 10.0% |
| !!! | TATGAAATTTGTGAATTTTT+TGG | - | chr8_3:6897849-6897868 | Msa1273160:intron | 15.0% |
| !!! | ATGAAATTTGTGAATTTTTT+GGG | - | chr8_3:6897850-6897869 | Msa1273160:intron | 15.0% |
| !!! | AATTTTAAGTAAAGAAAACA+TGG | + | chr8_3:6898606-6898625 | None:intergenic | 15.0% |
| !! | TTCTTTACTTAAAATTTAGT+TGG | - | chr8_3:6898610-6898629 | Msa1273160:intron | 15.0% |
| !! | ATTATTCATTTGAAAAATGA+GGG | + | chr8_3:6900215-6900234 | None:intergenic | 15.0% |
| !!! | TATGAAATTTGTGAATTTTT+TGG | - | chr8_3:6897849-6897868 | Msa1273160:intron | 15.0% |
| !!! | ATGAAATTTGTGAATTTTTT+GGG | - | chr8_3:6897850-6897869 | Msa1273160:intron | 15.0% |
| !!! | AATTTTAAGTAAAGAAAACA+TGG | + | chr8_3:6898606-6898625 | None:intergenic | 15.0% |
| !! | TTCTTTACTTAAAATTTAGT+TGG | - | chr8_3:6898610-6898629 | Msa1273160:intron | 15.0% |
| !! | ATTATTCATTTGAAAAATGA+GGG | + | chr8_3:6900215-6900234 | None:intergenic | 15.0% |
| !! | TTCTTAAATTTATTTATGCG+TGG | - | chr8_3:6898410-6898429 | Msa1273160:intron | 20.0% |
| !! | TCTTAAATTTATTTATGCGT+GGG | - | chr8_3:6898411-6898430 | Msa1273160:intron | 20.0% |
| !! | AAGATAATAATATTAAGTCG+AGG | + | chr8_3:6898768-6898787 | None:intergenic | 20.0% |
| !! | TTACTTGTTTAAGTGTTAAA+TGG | - | chr8_3:6899310-6899329 | Msa1273160:intron | 20.0% |
| !! | TGATATATTAAAACTGTCAT+TGG | - | chr8_3:6899537-6899556 | Msa1273160:intron | 20.0% |
| !! | GATATATTAAAACTGTCATT+GGG | - | chr8_3:6899538-6899557 | Msa1273160:intron | 20.0% |
| !!! | CTTCACAATTTAATTTATGA+TGG | + | chr8_3:6899594-6899613 | None:intergenic | 20.0% |
| !! | GAATATATATGTACATTGTA+AGG | - | chr8_3:6899613-6899632 | Msa1273160:intron | 20.0% |
| !! | CATTATTCATTTGAAAAATG+AGG | + | chr8_3:6900216-6900235 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTTGTCATGATTA+AGG | - | chr8_3:6900240-6900259 | Msa1273160:intron | 20.0% |
| !! | TATTTATTAATCACCCAAAT+CGG | - | chr8_3:6900721-6900740 | Msa1273160:intron | 20.0% |
| !!! | GATTTTCATGTTTTATATTC+TGG | - | chr8_3:6900878-6900897 | Msa1273160:intron | 20.0% |
| !! | TTCTTAAATTTATTTATGCG+TGG | - | chr8_3:6898410-6898429 | Msa1273160:intron | 20.0% |
| !! | TCTTAAATTTATTTATGCGT+GGG | - | chr8_3:6898411-6898430 | Msa1273160:intron | 20.0% |
| !! | AAGATAATAATATTAAGTCG+AGG | + | chr8_3:6898768-6898787 | None:intergenic | 20.0% |
| !! | TTACTTGTTTAAGTGTTAAA+TGG | - | chr8_3:6899310-6899329 | Msa1273160:intron | 20.0% |
| !! | TGATATATTAAAACTGTCAT+TGG | - | chr8_3:6899537-6899556 | Msa1273160:intron | 20.0% |
| !! | GATATATTAAAACTGTCATT+GGG | - | chr8_3:6899538-6899557 | Msa1273160:intron | 20.0% |
| !!! | CTTCACAATTTAATTTATGA+TGG | + | chr8_3:6899594-6899613 | None:intergenic | 20.0% |
| !! | GAATATATATGTACATTGTA+AGG | - | chr8_3:6899613-6899632 | Msa1273160:intron | 20.0% |
| !! | CATTATTCATTTGAAAAATG+AGG | + | chr8_3:6900216-6900235 | None:intergenic | 20.0% |
| !!! | TTTTGTTTTTGTCATGATTA+AGG | - | chr8_3:6900240-6900259 | Msa1273160:intron | 20.0% |
| !! | TATTTATTAATCACCCAAAT+CGG | - | chr8_3:6900721-6900740 | Msa1273160:intron | 20.0% |
| !!! | GATTTTCATGTTTTATATTC+TGG | - | chr8_3:6900878-6900897 | Msa1273160:intron | 20.0% |
| ! | AAATAGAGAAGAAGAAGAAA+CGG | + | chr8_3:6897447-6897466 | None:intergenic | 25.0% |
| ! | GAATGTGAATTGTAGAAAAT+TGG | + | chr8_3:6897470-6897489 | None:intergenic | 25.0% |
| ! | ACATTAGATATAGTGAAATG+AGG | - | chr8_3:6897548-6897567 | Msa1273160:three_prime_UTR | 25.0% |
| ! | AAGAAAAGGGTAAGTAAAAA+TGG | + | chr8_3:6897692-6897711 | None:intergenic | 25.0% |
| !! | TTTTGCGATTGAAAAGAAAA+GGG | + | chr8_3:6897705-6897724 | None:intergenic | 25.0% |
| !! | TTTTTGCGATTGAAAAGAAA+AGG | + | chr8_3:6897706-6897725 | None:intergenic | 25.0% |
| ! | TAAAATAAACTGGGACATTA+GGG | + | chr8_3:6897787-6897806 | None:intergenic | 25.0% |
| !! | TTTGGTTTATTTGTAGTGAA+TGG | - | chr8_3:6898023-6898042 | Msa1273160:CDS | 25.0% |
| ! | TTGGTTTATTTGTAGTGAAT+GGG | - | chr8_3:6898024-6898043 | Msa1273160:CDS | 25.0% |
| ! | CTTAAATTTATTTATGCGTG+GGG | - | chr8_3:6898412-6898431 | Msa1273160:intron | 25.0% |
| ! | TTCAAGAATCATTAACATCA+AGG | + | chr8_3:6898447-6898466 | None:intergenic | 25.0% |
| !! | TATTTGATAATTGAGTTGCA+AGG | + | chr8_3:6898567-6898586 | None:intergenic | 25.0% |
| ! | AGTAAAGAAAACATGGAAAT+AGG | + | chr8_3:6898599-6898618 | None:intergenic | 25.0% |
| !! | TTAAAATTTAGTTGGTTCCT+GGG | - | chr8_3:6898618-6898637 | Msa1273160:intron | 25.0% |
| ! | ACAAAGTTGTAAAATACTGA+AGG | + | chr8_3:6899368-6899387 | None:intergenic | 25.0% |
| ! | ATTATTTGAGTCATGACTTA+CGG | + | chr8_3:6899652-6899671 | None:intergenic | 25.0% |
| ! | TATTTGATGAACAAAAGCTA+AGG | - | chr8_3:6899872-6899891 | Msa1273160:intron | 25.0% |
| !!! | AACAGTTTGTTTGAGAATTT+TGG | - | chr8_3:6900060-6900079 | Msa1273160:intron | 25.0% |
| !!! | CATCTCAACTATTTTTATGT+TGG | - | chr8_3:6900432-6900451 | Msa1273160:intron | 25.0% |
| !! | CTAAAGGAAAAACATTTTCT+TGG | - | chr8_3:6900537-6900556 | Msa1273160:intron | 25.0% |
| ! | ATAGATTCGAGAAATAAGTA+AGG | - | chr8_3:6900697-6900716 | Msa1273160:intron | 25.0% |
| ! | ATGAATATTTGGACAAACAT+GGG | - | chr8_3:6901044-6901063 | Msa1273160:intron | 25.0% |
| ! | AGATTAACAGAATATTAAGC+TGG | - | chr8_3:6901081-6901100 | Msa1273160:intron | 25.0% |
| !! | TGTTTAAAGTCACAACATTA+AGG | + | chr8_3:6901208-6901227 | None:intergenic | 25.0% |
| ! | AAACATATGAAGTGTACATA+TGG | - | chr8_3:6901223-6901242 | Msa1273160:CDS | 25.0% |
| ! | AAATAGAGAAGAAGAAGAAA+CGG | + | chr8_3:6897447-6897466 | None:intergenic | 25.0% |
| ! | GAATGTGAATTGTAGAAAAT+TGG | + | chr8_3:6897470-6897489 | None:intergenic | 25.0% |
| ! | ACATTAGATATAGTGAAATG+AGG | - | chr8_3:6897548-6897567 | Msa1273160:three_prime_UTR | 25.0% |
| ! | AAGAAAAGGGTAAGTAAAAA+TGG | + | chr8_3:6897692-6897711 | None:intergenic | 25.0% |
| !! | TTTTGCGATTGAAAAGAAAA+GGG | + | chr8_3:6897705-6897724 | None:intergenic | 25.0% |
| !! | TTTTTGCGATTGAAAAGAAA+AGG | + | chr8_3:6897706-6897725 | None:intergenic | 25.0% |
| ! | TAAAATAAACTGGGACATTA+GGG | + | chr8_3:6897787-6897806 | None:intergenic | 25.0% |
| !! | TTTGGTTTATTTGTAGTGAA+TGG | - | chr8_3:6898023-6898042 | Msa1273160:CDS | 25.0% |
| ! | TTGGTTTATTTGTAGTGAAT+GGG | - | chr8_3:6898024-6898043 | Msa1273160:CDS | 25.0% |
| ! | CTTAAATTTATTTATGCGTG+GGG | - | chr8_3:6898412-6898431 | Msa1273160:intron | 25.0% |
| ! | TTCAAGAATCATTAACATCA+AGG | + | chr8_3:6898447-6898466 | None:intergenic | 25.0% |
| !! | TATTTGATAATTGAGTTGCA+AGG | + | chr8_3:6898567-6898586 | None:intergenic | 25.0% |
| ! | AGTAAAGAAAACATGGAAAT+AGG | + | chr8_3:6898599-6898618 | None:intergenic | 25.0% |
| !! | TTAAAATTTAGTTGGTTCCT+GGG | - | chr8_3:6898618-6898637 | Msa1273160:intron | 25.0% |
| ! | ACAAAGTTGTAAAATACTGA+AGG | + | chr8_3:6899368-6899387 | None:intergenic | 25.0% |
| ! | ATTATTTGAGTCATGACTTA+CGG | + | chr8_3:6899652-6899671 | None:intergenic | 25.0% |
| ! | TATTTGATGAACAAAAGCTA+AGG | - | chr8_3:6899872-6899891 | Msa1273160:intron | 25.0% |
| !!! | AACAGTTTGTTTGAGAATTT+TGG | - | chr8_3:6900060-6900079 | Msa1273160:intron | 25.0% |
| !!! | CATCTCAACTATTTTTATGT+TGG | - | chr8_3:6900432-6900451 | Msa1273160:intron | 25.0% |
| !! | CTAAAGGAAAAACATTTTCT+TGG | - | chr8_3:6900537-6900556 | Msa1273160:intron | 25.0% |
| ! | ATAGATTCGAGAAATAAGTA+AGG | - | chr8_3:6900697-6900716 | Msa1273160:intron | 25.0% |
| ! | ATGAATATTTGGACAAACAT+GGG | - | chr8_3:6901044-6901063 | Msa1273160:intron | 25.0% |
| ! | AGATTAACAGAATATTAAGC+TGG | - | chr8_3:6901081-6901100 | Msa1273160:intron | 25.0% |
| !! | TGTTTAAAGTCACAACATTA+AGG | + | chr8_3:6901208-6901227 | None:intergenic | 25.0% |
| ! | AAACATATGAAGTGTACATA+TGG | - | chr8_3:6901223-6901242 | Msa1273160:CDS | 25.0% |
| !!! | ACATGGGTTTTTTGTTTTGT+AGG | - | chr8_3:6897748-6897767 | Msa1273160:CDS | 30.0% |
| GTAAAATAAACTGGGACATT+AGG | + | chr8_3:6897788-6897807 | None:intergenic | 30.0% | |
| CACGATTGGTAAAATAAACT+GGG | + | chr8_3:6897796-6897815 | None:intergenic | 30.0% | |
| !! | TTGGGTGTTTTTGATTGTTT+AGG | - | chr8_3:6897868-6897887 | Msa1273160:intron | 30.0% |
| !! | TGGGTGTTTTTGATTGTTTA+GGG | - | chr8_3:6897869-6897888 | Msa1273160:intron | 30.0% |
| !! | TTGATTTGAAATTTGGGTTG+TGG | - | chr8_3:6897900-6897919 | Msa1273160:intron | 30.0% |
| !! | TGATTTGAAATTTGGGTTGT+GGG | - | chr8_3:6897901-6897920 | Msa1273160:intron | 30.0% |
| CATGTATGCAATTGAAATTG+TGG | - | chr8_3:6897946-6897965 | Msa1273160:intron | 30.0% | |
| TATGCAATTGAAATTGTGGT+TGG | - | chr8_3:6897950-6897969 | Msa1273160:intron | 30.0% | |
| ! | TGGTTGGAATATTGAGATTT+TGG | - | chr8_3:6897966-6897985 | Msa1273160:CDS | 30.0% |
| ! | TTGGAATATTGAGATTTTGG+AGG | - | chr8_3:6897969-6897988 | Msa1273160:CDS | 30.0% |
| CAAATAAACCAAACACATTG+TGG | + | chr8_3:6898016-6898035 | None:intergenic | 30.0% | |
| ACGAGAGCAATATTTATGAT+AGG | + | chr8_3:6898367-6898386 | None:intergenic | 30.0% | |
| GAAACATTAAGTAGTTCTCT+TGG | - | chr8_3:6898464-6898483 | Msa1273160:CDS | 30.0% | |
| TTCTCTTGGAAAAGATCATT+TGG | - | chr8_3:6898478-6898497 | Msa1273160:CDS | 30.0% | |
| GCTCAGAATTCTTAAAATTG+TGG | + | chr8_3:6898504-6898523 | None:intergenic | 30.0% | |
| ! | CTTAAAATTTAGTTGGTTCC+TGG | - | chr8_3:6898617-6898636 | Msa1273160:intron | 30.0% |
| TAAACCAAACACAACTTTGT+GGG | - | chr8_3:6898844-6898863 | Msa1273160:intron | 30.0% | |
| CAAGACATACATACATATCT+TGG | + | chr8_3:6898887-6898906 | None:intergenic | 30.0% | |
| !!! | GTCTTGTTTTGAGTTAGTTT+TGG | - | chr8_3:6898901-6898920 | Msa1273160:intron | 30.0% |
| !!! | TGTTTTGAGTTAGTTTTGGA+AGG | - | chr8_3:6898905-6898924 | Msa1273160:intron | 30.0% |
| ! | TCTTCTTTTGCACATATTTC+AGG | - | chr8_3:6899111-6899130 | Msa1273160:intron | 30.0% |
| ! | AACAAACCTTTTGCAATTCT+CGG | + | chr8_3:6899192-6899211 | None:intergenic | 30.0% |
| !! | ATTTACACTGTTTCTGATCT+AGG | - | chr8_3:6899503-6899522 | Msa1273160:intron | 30.0% |
| ATTTCGTGTGGAAGAATAAA+GGG | + | chr8_3:6899756-6899775 | None:intergenic | 30.0% | |
| ! | GTTTGAAATTTCATTTCGTG+TGG | + | chr8_3:6899768-6899787 | None:intergenic | 30.0% |
| !!! | CAAAGCTTTTGGCTTAAAAT+TGG | + | chr8_3:6899790-6899809 | None:intergenic | 30.0% |
| GAATTAGAGAGATAAAGAGA+TGG | + | chr8_3:6899836-6899855 | None:intergenic | 30.0% | |
| TCATTTGAAAAATGAGGGTA+AGG | + | chr8_3:6900210-6900229 | None:intergenic | 30.0% | |
| ! | TTTTGTCATGATTAAGGCTT+TGG | - | chr8_3:6900246-6900265 | Msa1273160:intron | 30.0% |
| GCTATATGGTTGAAGAAATA+TGG | - | chr8_3:6900296-6900315 | Msa1273160:intron | 30.0% | |
| ! | TAAATTCAACAAGCCGATTT+GGG | + | chr8_3:6900737-6900756 | None:intergenic | 30.0% |
| CATTTAACTACTCCTTTCTT+AGG | - | chr8_3:6900940-6900959 | Msa1273160:intron | 30.0% | |
| AAGTTTGATACTAGTTGTGA+TGG | + | chr8_3:6901004-6901023 | None:intergenic | 30.0% | |
| ATCACAACTAGTATCAAACT+TGG | - | chr8_3:6901003-6901022 | Msa1273160:CDS | 30.0% | |
| CATGTTTGTCCAAATATTCA+TGG | + | chr8_3:6901045-6901064 | None:intergenic | 30.0% | |
| CATGAATATTTGGACAAACA+TGG | - | chr8_3:6901043-6901062 | Msa1273160:intron | 30.0% | |
| ATGAAATGTTAAGTTTCACC+AGG | + | chr8_3:6901303-6901322 | None:intergenic | 30.0% | |
| !! | TTTATTTGACCAATTTGCTG+TGG | - | chr8_3:6901349-6901368 | Msa1273160:five_prime_UTR | 30.0% |
| TAAAAGAATTGTGGAAGAGA+GGG | - | chr8_3:6901380-6901399 | Msa1273160:five_prime_UTR | 30.0% | |
| !!! | ACATGGGTTTTTTGTTTTGT+AGG | - | chr8_3:6897748-6897767 | Msa1273160:CDS | 30.0% |
| GTAAAATAAACTGGGACATT+AGG | + | chr8_3:6897788-6897807 | None:intergenic | 30.0% | |
| CACGATTGGTAAAATAAACT+GGG | + | chr8_3:6897796-6897815 | None:intergenic | 30.0% | |
| !! | TTGGGTGTTTTTGATTGTTT+AGG | - | chr8_3:6897868-6897887 | Msa1273160:intron | 30.0% |
| !! | TGGGTGTTTTTGATTGTTTA+GGG | - | chr8_3:6897869-6897888 | Msa1273160:intron | 30.0% |
| !! | TTGATTTGAAATTTGGGTTG+TGG | - | chr8_3:6897900-6897919 | Msa1273160:intron | 30.0% |
| !! | TGATTTGAAATTTGGGTTGT+GGG | - | chr8_3:6897901-6897920 | Msa1273160:intron | 30.0% |
| CATGTATGCAATTGAAATTG+TGG | - | chr8_3:6897946-6897965 | Msa1273160:intron | 30.0% | |
| TATGCAATTGAAATTGTGGT+TGG | - | chr8_3:6897950-6897969 | Msa1273160:intron | 30.0% | |
| ! | TGGTTGGAATATTGAGATTT+TGG | - | chr8_3:6897966-6897985 | Msa1273160:CDS | 30.0% |
| ! | TTGGAATATTGAGATTTTGG+AGG | - | chr8_3:6897969-6897988 | Msa1273160:CDS | 30.0% |
| CAAATAAACCAAACACATTG+TGG | + | chr8_3:6898016-6898035 | None:intergenic | 30.0% | |
| ACGAGAGCAATATTTATGAT+AGG | + | chr8_3:6898367-6898386 | None:intergenic | 30.0% | |
| GAAACATTAAGTAGTTCTCT+TGG | - | chr8_3:6898464-6898483 | Msa1273160:CDS | 30.0% | |
| TTCTCTTGGAAAAGATCATT+TGG | - | chr8_3:6898478-6898497 | Msa1273160:CDS | 30.0% | |
| GCTCAGAATTCTTAAAATTG+TGG | + | chr8_3:6898504-6898523 | None:intergenic | 30.0% | |
| ! | CTTAAAATTTAGTTGGTTCC+TGG | - | chr8_3:6898617-6898636 | Msa1273160:intron | 30.0% |
| TAAACCAAACACAACTTTGT+GGG | - | chr8_3:6898844-6898863 | Msa1273160:intron | 30.0% | |
| CAAGACATACATACATATCT+TGG | + | chr8_3:6898887-6898906 | None:intergenic | 30.0% | |
| !!! | GTCTTGTTTTGAGTTAGTTT+TGG | - | chr8_3:6898901-6898920 | Msa1273160:intron | 30.0% |
| !!! | TGTTTTGAGTTAGTTTTGGA+AGG | - | chr8_3:6898905-6898924 | Msa1273160:intron | 30.0% |
| ! | TCTTCTTTTGCACATATTTC+AGG | - | chr8_3:6899111-6899130 | Msa1273160:intron | 30.0% |
| ! | AACAAACCTTTTGCAATTCT+CGG | + | chr8_3:6899192-6899211 | None:intergenic | 30.0% |
| !! | ATTTACACTGTTTCTGATCT+AGG | - | chr8_3:6899503-6899522 | Msa1273160:intron | 30.0% |
| ATTTCGTGTGGAAGAATAAA+GGG | + | chr8_3:6899756-6899775 | None:intergenic | 30.0% | |
| ! | GTTTGAAATTTCATTTCGTG+TGG | + | chr8_3:6899768-6899787 | None:intergenic | 30.0% |
| !!! | CAAAGCTTTTGGCTTAAAAT+TGG | + | chr8_3:6899790-6899809 | None:intergenic | 30.0% |
| GAATTAGAGAGATAAAGAGA+TGG | + | chr8_3:6899836-6899855 | None:intergenic | 30.0% | |
| TCATTTGAAAAATGAGGGTA+AGG | + | chr8_3:6900210-6900229 | None:intergenic | 30.0% | |
| ! | TTTTGTCATGATTAAGGCTT+TGG | - | chr8_3:6900246-6900265 | Msa1273160:intron | 30.0% |
| GCTATATGGTTGAAGAAATA+TGG | - | chr8_3:6900296-6900315 | Msa1273160:intron | 30.0% | |
| ! | TAAATTCAACAAGCCGATTT+GGG | + | chr8_3:6900737-6900756 | None:intergenic | 30.0% |
| CATTTAACTACTCCTTTCTT+AGG | - | chr8_3:6900940-6900959 | Msa1273160:intron | 30.0% | |
| AAGTTTGATACTAGTTGTGA+TGG | + | chr8_3:6901004-6901023 | None:intergenic | 30.0% | |
| ATCACAACTAGTATCAAACT+TGG | - | chr8_3:6901003-6901022 | Msa1273160:CDS | 30.0% | |
| CATGTTTGTCCAAATATTCA+TGG | + | chr8_3:6901045-6901064 | None:intergenic | 30.0% | |
| CATGAATATTTGGACAAACA+TGG | - | chr8_3:6901043-6901062 | Msa1273160:intron | 30.0% | |
| ATGAAATGTTAAGTTTCACC+AGG | + | chr8_3:6901303-6901322 | None:intergenic | 30.0% | |
| !! | TTTATTTGACCAATTTGCTG+TGG | - | chr8_3:6901349-6901368 | Msa1273160:five_prime_UTR | 30.0% |
| TAAAAGAATTGTGGAAGAGA+GGG | - | chr8_3:6901380-6901399 | Msa1273160:five_prime_UTR | 30.0% | |
| ! | AGAAAGGTAACAACGAGTTT+TGG | + | chr8_3:6897411-6897430 | None:intergenic | 35.0% |
| TCGTTGTTACCTTTCTTCAT+CGG | - | chr8_3:6897415-6897434 | Msa1273160:three_prime_UTR | 35.0% | |
| ! | ACTTTGTTTCGTTTCTCACA+TGG | - | chr8_3:6897731-6897750 | Msa1273160:exon | 35.0% |
| ! | CTTTGTTTCGTTTCTCACAT+GGG | - | chr8_3:6897732-6897751 | Msa1273160:exon | 35.0% |
| GCACGATTGGTAAAATAAAC+TGG | + | chr8_3:6897797-6897816 | None:intergenic | 35.0% | |
| !!! | ATTTGGGTTGTGGGTTTTTT+AGG | - | chr8_3:6897910-6897929 | Msa1273160:intron | 35.0% |
| !!! | TTTGGGTTGTGGGTTTTTTA+GGG | - | chr8_3:6897911-6897930 | Msa1273160:intron | 35.0% |
| AATTGTGTCCACAATGTGTT+TGG | - | chr8_3:6898005-6898024 | Msa1273160:CDS | 35.0% | |
| TTATTTGTAGTGAATGGGAG+AGG | - | chr8_3:6898029-6898048 | Msa1273160:CDS | 35.0% | |
| TATTTGTAGTGAATGGGAGA+GGG | - | chr8_3:6898030-6898049 | Msa1273160:CDS | 35.0% | |
| ! | CTGGTTGATTTAATGGCTAT+CGG | - | chr8_3:6898156-6898175 | Msa1273160:intron | 35.0% |
| ! | CGTGCATTTTCACGAATAAA+GGG | + | chr8_3:6898257-6898276 | None:intergenic | 35.0% |
| GATTAGGCGTAAAACAGATT+GGG | - | chr8_3:6898325-6898344 | Msa1273160:intron | 35.0% | |
| ATATTAAGTCGAGGTTTCCA+CGG | + | chr8_3:6898759-6898778 | None:intergenic | 35.0% | |
| CTAAACCAAACACAACTTTG+TGG | - | chr8_3:6898843-6898862 | Msa1273160:intron | 35.0% | |
| AAAAATATTCACACAGCCAG+TGG | + | chr8_3:6899010-6899029 | None:intergenic | 35.0% | |
| ATTTCAGGCACACTATATGT+TGG | - | chr8_3:6899126-6899145 | Msa1273160:intron | 35.0% | |
| TTTCAGGCACACTATATGTT+GGG | - | chr8_3:6899127-6899146 | Msa1273160:intron | 35.0% | |
| CAGAAACAAGAACATACGAA+AGG | - | chr8_3:6899163-6899182 | Msa1273160:intron | 35.0% | |
| TGAAGGTCACAAACAGAAAA+GGG | + | chr8_3:6899351-6899370 | None:intergenic | 35.0% | |
| GTGCAATTGATAAATGTTGC+AGG | - | chr8_3:6899386-6899405 | Msa1273160:intron | 35.0% | |
| AAAACTGTCATTGGGTTTGA+CGG | - | chr8_3:6899546-6899565 | Msa1273160:intron | 35.0% | |
| GTGTATGAATTATTGGGCTA+GGG | + | chr8_3:6899723-6899742 | None:intergenic | 35.0% | |
| TGGAAGAATAAAGGGGATTA+GGG | + | chr8_3:6899748-6899767 | None:intergenic | 35.0% | |
| TTTCGTGTGGAAGAATAAAG+GGG | + | chr8_3:6899755-6899774 | None:intergenic | 35.0% | |
| CATTTCGTGTGGAAGAATAA+AGG | + | chr8_3:6899757-6899776 | None:intergenic | 35.0% | |
| AATTCCCAATATTGCTTGCT+TGG | - | chr8_3:6899945-6899964 | Msa1273160:intron | 35.0% | |
| ATTCCCAATATTGCTTGCTT+GGG | - | chr8_3:6899946-6899965 | Msa1273160:intron | 35.0% | |
| !! | ATGATTAAGGCTTTGGATCT+TGG | - | chr8_3:6900253-6900272 | Msa1273160:intron | 35.0% |
| !! | TGATTAAGGCTTTGGATCTT+GGG | - | chr8_3:6900254-6900273 | Msa1273160:intron | 35.0% |
| AATATGGCAAGAGTTTGCAA+AGG | - | chr8_3:6900312-6900331 | Msa1273160:intron | 35.0% | |
| GTTTGCAAAGGCAAAATACA+AGG | - | chr8_3:6900324-6900343 | Msa1273160:intron | 35.0% | |
| AAAGGCAAAATACAAGGAGT+GGG | - | chr8_3:6900330-6900349 | Msa1273160:intron | 35.0% | |
| !!! | ACATTTTCTTGGCTCTGAAA+TGG | - | chr8_3:6900548-6900567 | Msa1273160:intron | 35.0% |
| ! | TACTTCCCATTTGAAACAGT+TGG | - | chr8_3:6900593-6900612 | Msa1273160:intron | 35.0% |
| GTAAATTCAACAAGCCGATT+TGG | + | chr8_3:6900738-6900757 | None:intergenic | 35.0% | |
| !! | AATCGGCTTGTTGAATTTAC+AGG | - | chr8_3:6900738-6900757 | Msa1273160:CDS | 35.0% |
| TTCTACAGCATAGATGATCA+GGG | + | chr8_3:6900765-6900784 | None:intergenic | 35.0% | |
| ATTCTACAGCATAGATGATC+AGG | + | chr8_3:6900766-6900785 | None:intergenic | 35.0% | |
| ! | ATCACATTACCTTCTGAAGA+TGG | + | chr8_3:6900861-6900880 | None:intergenic | 35.0% |
| !! | ATGTTTTTCGATATCCATCG+AGG | - | chr8_3:6900906-6900925 | Msa1273160:intron | 35.0% |
| TAACTACTCCTTTCTTAGGT+TGG | - | chr8_3:6900944-6900963 | Msa1273160:intron | 35.0% | |
| CAAATTCACCAACCTAAGAA+AGG | + | chr8_3:6900955-6900974 | None:intergenic | 35.0% | |
| TAGTATCAAACTTGGCCATT+AGG | - | chr8_3:6901011-6901030 | Msa1273160:CDS | 35.0% | |
| AGTATCAAACTTGGCCATTA+GGG | - | chr8_3:6901012-6901031 | Msa1273160:CDS | 35.0% | |
| AATATTTGGACAAACATGGG+TGG | - | chr8_3:6901047-6901066 | Msa1273160:intron | 35.0% | |
| ATATTTGGACAAACATGGGT+GGG | - | chr8_3:6901048-6901067 | Msa1273160:intron | 35.0% | |
| GTTCCTTCCTAAAAGAATTG+TGG | - | chr8_3:6901371-6901390 | Msa1273160:five_prime_UTR | 35.0% | |
| !! | CTTCCACAATTCTTTTAGGA+AGG | + | chr8_3:6901377-6901396 | None:intergenic | 35.0% |
| ! | CTCTCTTCCACAATTCTTTT+AGG | + | chr8_3:6901381-6901400 | None:intergenic | 35.0% |
| CTAAAAGAATTGTGGAAGAG+AGG | - | chr8_3:6901379-6901398 | Msa1273160:five_prime_UTR | 35.0% | |
| ATAAGATGAGAGATAGAGGT+AGG | + | chr8_3:6901414-6901433 | None:intergenic | 35.0% | |
| ! | AGAAAGGTAACAACGAGTTT+TGG | + | chr8_3:6897411-6897430 | None:intergenic | 35.0% |
| TCGTTGTTACCTTTCTTCAT+CGG | - | chr8_3:6897415-6897434 | Msa1273160:three_prime_UTR | 35.0% | |
| ! | ACTTTGTTTCGTTTCTCACA+TGG | - | chr8_3:6897731-6897750 | Msa1273160:exon | 35.0% |
| ! | CTTTGTTTCGTTTCTCACAT+GGG | - | chr8_3:6897732-6897751 | Msa1273160:exon | 35.0% |
| GCACGATTGGTAAAATAAAC+TGG | + | chr8_3:6897797-6897816 | None:intergenic | 35.0% | |
| !!! | ATTTGGGTTGTGGGTTTTTT+AGG | - | chr8_3:6897910-6897929 | Msa1273160:intron | 35.0% |
| !!! | TTTGGGTTGTGGGTTTTTTA+GGG | - | chr8_3:6897911-6897930 | Msa1273160:intron | 35.0% |
| AATTGTGTCCACAATGTGTT+TGG | - | chr8_3:6898005-6898024 | Msa1273160:CDS | 35.0% | |
| TTATTTGTAGTGAATGGGAG+AGG | - | chr8_3:6898029-6898048 | Msa1273160:CDS | 35.0% | |
| TATTTGTAGTGAATGGGAGA+GGG | - | chr8_3:6898030-6898049 | Msa1273160:CDS | 35.0% | |
| ! | CTGGTTGATTTAATGGCTAT+CGG | - | chr8_3:6898156-6898175 | Msa1273160:intron | 35.0% |
| ! | CGTGCATTTTCACGAATAAA+GGG | + | chr8_3:6898257-6898276 | None:intergenic | 35.0% |
| GATTAGGCGTAAAACAGATT+GGG | - | chr8_3:6898325-6898344 | Msa1273160:intron | 35.0% | |
| ATATTAAGTCGAGGTTTCCA+CGG | + | chr8_3:6898759-6898778 | None:intergenic | 35.0% | |
| CTAAACCAAACACAACTTTG+TGG | - | chr8_3:6898843-6898862 | Msa1273160:intron | 35.0% | |
| AAAAATATTCACACAGCCAG+TGG | + | chr8_3:6899010-6899029 | None:intergenic | 35.0% | |
| ATTTCAGGCACACTATATGT+TGG | - | chr8_3:6899126-6899145 | Msa1273160:intron | 35.0% | |
| TTTCAGGCACACTATATGTT+GGG | - | chr8_3:6899127-6899146 | Msa1273160:intron | 35.0% | |
| CAGAAACAAGAACATACGAA+AGG | - | chr8_3:6899163-6899182 | Msa1273160:intron | 35.0% | |
| TGAAGGTCACAAACAGAAAA+GGG | + | chr8_3:6899351-6899370 | None:intergenic | 35.0% | |
| GTGCAATTGATAAATGTTGC+AGG | - | chr8_3:6899386-6899405 | Msa1273160:intron | 35.0% | |
| AAAACTGTCATTGGGTTTGA+CGG | - | chr8_3:6899546-6899565 | Msa1273160:intron | 35.0% | |
| GTGTATGAATTATTGGGCTA+GGG | + | chr8_3:6899723-6899742 | None:intergenic | 35.0% | |
| TGGAAGAATAAAGGGGATTA+GGG | + | chr8_3:6899748-6899767 | None:intergenic | 35.0% | |
| TTTCGTGTGGAAGAATAAAG+GGG | + | chr8_3:6899755-6899774 | None:intergenic | 35.0% | |
| CATTTCGTGTGGAAGAATAA+AGG | + | chr8_3:6899757-6899776 | None:intergenic | 35.0% | |
| AATTCCCAATATTGCTTGCT+TGG | - | chr8_3:6899945-6899964 | Msa1273160:intron | 35.0% | |
| ATTCCCAATATTGCTTGCTT+GGG | - | chr8_3:6899946-6899965 | Msa1273160:intron | 35.0% | |
| !! | ATGATTAAGGCTTTGGATCT+TGG | - | chr8_3:6900253-6900272 | Msa1273160:intron | 35.0% |
| !! | TGATTAAGGCTTTGGATCTT+GGG | - | chr8_3:6900254-6900273 | Msa1273160:intron | 35.0% |
| AATATGGCAAGAGTTTGCAA+AGG | - | chr8_3:6900312-6900331 | Msa1273160:intron | 35.0% | |
| GTTTGCAAAGGCAAAATACA+AGG | - | chr8_3:6900324-6900343 | Msa1273160:intron | 35.0% | |
| AAAGGCAAAATACAAGGAGT+GGG | - | chr8_3:6900330-6900349 | Msa1273160:intron | 35.0% | |
| !!! | ACATTTTCTTGGCTCTGAAA+TGG | - | chr8_3:6900548-6900567 | Msa1273160:intron | 35.0% |
| ! | TACTTCCCATTTGAAACAGT+TGG | - | chr8_3:6900593-6900612 | Msa1273160:intron | 35.0% |
| GTAAATTCAACAAGCCGATT+TGG | + | chr8_3:6900738-6900757 | None:intergenic | 35.0% | |
| !! | AATCGGCTTGTTGAATTTAC+AGG | - | chr8_3:6900738-6900757 | Msa1273160:CDS | 35.0% |
| TTCTACAGCATAGATGATCA+GGG | + | chr8_3:6900765-6900784 | None:intergenic | 35.0% | |
| ATTCTACAGCATAGATGATC+AGG | + | chr8_3:6900766-6900785 | None:intergenic | 35.0% | |
| ! | ATCACATTACCTTCTGAAGA+TGG | + | chr8_3:6900861-6900880 | None:intergenic | 35.0% |
| !! | ATGTTTTTCGATATCCATCG+AGG | - | chr8_3:6900906-6900925 | Msa1273160:intron | 35.0% |
| TAACTACTCCTTTCTTAGGT+TGG | - | chr8_3:6900944-6900963 | Msa1273160:intron | 35.0% | |
| CAAATTCACCAACCTAAGAA+AGG | + | chr8_3:6900955-6900974 | None:intergenic | 35.0% | |
| TAGTATCAAACTTGGCCATT+AGG | - | chr8_3:6901011-6901030 | Msa1273160:CDS | 35.0% | |
| AGTATCAAACTTGGCCATTA+GGG | - | chr8_3:6901012-6901031 | Msa1273160:CDS | 35.0% | |
| AATATTTGGACAAACATGGG+TGG | - | chr8_3:6901047-6901066 | Msa1273160:intron | 35.0% | |
| ATATTTGGACAAACATGGGT+GGG | - | chr8_3:6901048-6901067 | Msa1273160:intron | 35.0% | |
| GTTCCTTCCTAAAAGAATTG+TGG | - | chr8_3:6901371-6901390 | Msa1273160:five_prime_UTR | 35.0% | |
| !! | CTTCCACAATTCTTTTAGGA+AGG | + | chr8_3:6901377-6901396 | None:intergenic | 35.0% |
| ! | CTCTCTTCCACAATTCTTTT+AGG | + | chr8_3:6901381-6901400 | None:intergenic | 35.0% |
| CTAAAAGAATTGTGGAAGAG+AGG | - | chr8_3:6901379-6901398 | Msa1273160:five_prime_UTR | 35.0% | |
| ATAAGATGAGAGATAGAGGT+AGG | + | chr8_3:6901414-6901433 | None:intergenic | 35.0% | |
| ! | TTCTAGAAGAGCAATTCAGC+TGG | - | chr8_3:6898063-6898082 | Msa1273160:intron | 40.0% |
| CGATAGCCATTAAATCAACC+AGG | + | chr8_3:6898158-6898177 | None:intergenic | 40.0% | |
| ! | GCGTGCATTTTCACGAATAA+AGG | + | chr8_3:6898258-6898277 | None:intergenic | 40.0% |
| AATCCACGTGCCTTTACATT+CGG | - | chr8_3:6898303-6898322 | Msa1273160:intron | 40.0% | |
| TACGCCTAATCCGAATGTAA+AGG | + | chr8_3:6898316-6898335 | None:intergenic | 40.0% | |
| GGATTAGGCGTAAAACAGAT+TGG | - | chr8_3:6898324-6898343 | Msa1273160:intron | 40.0% | |
| GCGTAAAACAGATTGGGTAT+TGG | - | chr8_3:6898331-6898350 | Msa1273160:intron | 40.0% | |
| AAACCTCTCAGATGATGTAC+AGG | - | chr8_3:6898719-6898738 | Msa1273160:intron | 40.0% | |
| AGATCCCACAAAGTTGTGTT+TGG | + | chr8_3:6898851-6898870 | None:intergenic | 40.0% | |
| TTGAAGTGACTTCCAGAGTT+TGG | - | chr8_3:6898979-6898998 | Msa1273160:intron | 40.0% | |
| TGTGCAAAAGAAGATTCAGC+TGG | + | chr8_3:6899105-6899124 | None:intergenic | 40.0% | |
| AGGAATCCGAGAATTGCAAA+AGG | - | chr8_3:6899183-6899202 | Msa1273160:intron | 40.0% | |
| GTCCATGAAACACACAACAA+GGG | + | chr8_3:6899226-6899245 | None:intergenic | 40.0% | |
| TGTCCATGAAACACACAACA+AGG | + | chr8_3:6899227-6899246 | None:intergenic | 40.0% | |
| CTGAAGGTCACAAACAGAAA+AGG | + | chr8_3:6899352-6899371 | None:intergenic | 40.0% | |
| ! | ATTTTATGCTTCCTTCCCCT+GGG | - | chr8_3:6899455-6899474 | Msa1273160:intron | 40.0% |
| ATAAACCACATCCAATCCCA+GGG | + | chr8_3:6899474-6899493 | None:intergenic | 40.0% | |
| AATAAACCACATCCAATCCC+AGG | + | chr8_3:6899475-6899494 | None:intergenic | 40.0% | |
| CGTGTATGAATTATTGGGCT+AGG | + | chr8_3:6899724-6899743 | None:intergenic | 40.0% | |
| ! | AGGGGCGTGTATGAATTATT+GGG | + | chr8_3:6899729-6899748 | None:intergenic | 40.0% |
| ! | TAGGGGCGTGTATGAATTAT+TGG | + | chr8_3:6899730-6899749 | None:intergenic | 40.0% |
| GGAAGAATAAAGGGGATTAG+GGG | + | chr8_3:6899747-6899766 | None:intergenic | 40.0% | |
| GTGGAAGAATAAAGGGGATT+AGG | + | chr8_3:6899749-6899768 | None:intergenic | 40.0% | |
| TAAGCCAAAAGCTTTGCCTT+AGG | - | chr8_3:6899794-6899813 | Msa1273160:intron | 40.0% | |
| AAGCCAAAAGCTTTGCCTTA+GGG | - | chr8_3:6899795-6899814 | Msa1273160:intron | 40.0% | |
| CATCCATGTATATCACGTGA+GGG | - | chr8_3:6899898-6899917 | Msa1273160:intron | 40.0% | |
| GAACCCAAGCAAGCAATATT+GGG | + | chr8_3:6899952-6899971 | None:intergenic | 40.0% | |
| AGAACCCAAGCAAGCAATAT+TGG | + | chr8_3:6899953-6899972 | None:intergenic | 40.0% | |
| !!! | ATTCCTGCTGATTTTCAGTG+TGG | - | chr8_3:6900158-6900177 | Msa1273160:intron | 40.0% |
| AACCATATAGCCCTTTGGAT+TGG | + | chr8_3:6900287-6900306 | None:intergenic | 40.0% | |
| TCTTCAACCATATAGCCCTT+TGG | + | chr8_3:6900292-6900311 | None:intergenic | 40.0% | |
| CAAAGGCAAAATACAAGGAG+TGG | - | chr8_3:6900329-6900348 | Msa1273160:intron | 40.0% | |
| AGCTTGTAAGTCTGCTCTAA+AGG | - | chr8_3:6900521-6900540 | Msa1273160:intron | 40.0% | |
| !! | TTTCTTGGCTCTGAAATGGA+AGG | - | chr8_3:6900552-6900571 | Msa1273160:intron | 40.0% |
| ! | TTCCCATTTGAAACAGTTGG+AGG | - | chr8_3:6900596-6900615 | Msa1273160:intron | 40.0% |
| AGCCTCCAACTGTTTCAAAT+GGG | + | chr8_3:6900601-6900620 | None:intergenic | 40.0% | |
| CTTCAATAAAGCTGCAGATG+AGG | - | chr8_3:6900632-6900651 | Msa1273160:intron | 40.0% | |
| CTCTCATATGTATGTCCACT+AGG | + | chr8_3:6900823-6900842 | None:intergenic | 40.0% | |
| GATTCTTGACCATCTTCAGA+AGG | - | chr8_3:6900849-6900868 | Msa1273160:intron | 40.0% | |
| TGAATTTGATCCGATCACGA+GGG | - | chr8_3:6900967-6900986 | Msa1273160:intron | 40.0% | |
| !! | ACTAGTTGTGATGGATCAAG+TGG | + | chr8_3:6900995-6901014 | None:intergenic | 40.0% |
| GGAAGCAGTCCATGAATATT+TGG | - | chr8_3:6901033-6901052 | Msa1273160:CDS | 40.0% | |
| GGAAATTAGCAGTTTGTGAG+AGG | - | chr8_3:6901102-6901121 | Msa1273160:intron | 40.0% | |
| GATGATGTGTTGTGCAAGAT+TGG | - | chr8_3:6901156-6901175 | Msa1273160:CDS | 40.0% | |
| TGTGTACACATTTAAGTGCC+TGG | - | chr8_3:6901282-6901301 | Msa1273160:five_prime_UTR | 40.0% | |
| GGAGATAAGATGAGAGATAG+AGG | + | chr8_3:6901418-6901437 | None:intergenic | 40.0% | |
| ! | TTCTAGAAGAGCAATTCAGC+TGG | - | chr8_3:6898063-6898082 | Msa1273160:intron | 40.0% |
| CGATAGCCATTAAATCAACC+AGG | + | chr8_3:6898158-6898177 | None:intergenic | 40.0% | |
| ! | GCGTGCATTTTCACGAATAA+AGG | + | chr8_3:6898258-6898277 | None:intergenic | 40.0% |
| AATCCACGTGCCTTTACATT+CGG | - | chr8_3:6898303-6898322 | Msa1273160:intron | 40.0% | |
| TACGCCTAATCCGAATGTAA+AGG | + | chr8_3:6898316-6898335 | None:intergenic | 40.0% | |
| GGATTAGGCGTAAAACAGAT+TGG | - | chr8_3:6898324-6898343 | Msa1273160:intron | 40.0% | |
| GCGTAAAACAGATTGGGTAT+TGG | - | chr8_3:6898331-6898350 | Msa1273160:intron | 40.0% | |
| AAACCTCTCAGATGATGTAC+AGG | - | chr8_3:6898719-6898738 | Msa1273160:intron | 40.0% | |
| AGATCCCACAAAGTTGTGTT+TGG | + | chr8_3:6898851-6898870 | None:intergenic | 40.0% | |
| TTGAAGTGACTTCCAGAGTT+TGG | - | chr8_3:6898979-6898998 | Msa1273160:intron | 40.0% | |
| TGTGCAAAAGAAGATTCAGC+TGG | + | chr8_3:6899105-6899124 | None:intergenic | 40.0% | |
| AGGAATCCGAGAATTGCAAA+AGG | - | chr8_3:6899183-6899202 | Msa1273160:intron | 40.0% | |
| GTCCATGAAACACACAACAA+GGG | + | chr8_3:6899226-6899245 | None:intergenic | 40.0% | |
| TGTCCATGAAACACACAACA+AGG | + | chr8_3:6899227-6899246 | None:intergenic | 40.0% | |
| CTGAAGGTCACAAACAGAAA+AGG | + | chr8_3:6899352-6899371 | None:intergenic | 40.0% | |
| ! | ATTTTATGCTTCCTTCCCCT+GGG | - | chr8_3:6899455-6899474 | Msa1273160:intron | 40.0% |
| ATAAACCACATCCAATCCCA+GGG | + | chr8_3:6899474-6899493 | None:intergenic | 40.0% | |
| AATAAACCACATCCAATCCC+AGG | + | chr8_3:6899475-6899494 | None:intergenic | 40.0% | |
| CGTGTATGAATTATTGGGCT+AGG | + | chr8_3:6899724-6899743 | None:intergenic | 40.0% | |
| ! | AGGGGCGTGTATGAATTATT+GGG | + | chr8_3:6899729-6899748 | None:intergenic | 40.0% |
| ! | TAGGGGCGTGTATGAATTAT+TGG | + | chr8_3:6899730-6899749 | None:intergenic | 40.0% |
| GGAAGAATAAAGGGGATTAG+GGG | + | chr8_3:6899747-6899766 | None:intergenic | 40.0% | |
| GTGGAAGAATAAAGGGGATT+AGG | + | chr8_3:6899749-6899768 | None:intergenic | 40.0% | |
| TAAGCCAAAAGCTTTGCCTT+AGG | - | chr8_3:6899794-6899813 | Msa1273160:intron | 40.0% | |
| AAGCCAAAAGCTTTGCCTTA+GGG | - | chr8_3:6899795-6899814 | Msa1273160:intron | 40.0% | |
| CATCCATGTATATCACGTGA+GGG | - | chr8_3:6899898-6899917 | Msa1273160:intron | 40.0% | |
| GAACCCAAGCAAGCAATATT+GGG | + | chr8_3:6899952-6899971 | None:intergenic | 40.0% | |
| AGAACCCAAGCAAGCAATAT+TGG | + | chr8_3:6899953-6899972 | None:intergenic | 40.0% | |
| !!! | ATTCCTGCTGATTTTCAGTG+TGG | - | chr8_3:6900158-6900177 | Msa1273160:intron | 40.0% |
| AACCATATAGCCCTTTGGAT+TGG | + | chr8_3:6900287-6900306 | None:intergenic | 40.0% | |
| TCTTCAACCATATAGCCCTT+TGG | + | chr8_3:6900292-6900311 | None:intergenic | 40.0% | |
| CAAAGGCAAAATACAAGGAG+TGG | - | chr8_3:6900329-6900348 | Msa1273160:intron | 40.0% | |
| AGCTTGTAAGTCTGCTCTAA+AGG | - | chr8_3:6900521-6900540 | Msa1273160:intron | 40.0% | |
| !! | TTTCTTGGCTCTGAAATGGA+AGG | - | chr8_3:6900552-6900571 | Msa1273160:intron | 40.0% |
| ! | TTCCCATTTGAAACAGTTGG+AGG | - | chr8_3:6900596-6900615 | Msa1273160:intron | 40.0% |
| AGCCTCCAACTGTTTCAAAT+GGG | + | chr8_3:6900601-6900620 | None:intergenic | 40.0% | |
| CTTCAATAAAGCTGCAGATG+AGG | - | chr8_3:6900632-6900651 | Msa1273160:intron | 40.0% | |
| CTCTCATATGTATGTCCACT+AGG | + | chr8_3:6900823-6900842 | None:intergenic | 40.0% | |
| GATTCTTGACCATCTTCAGA+AGG | - | chr8_3:6900849-6900868 | Msa1273160:intron | 40.0% | |
| TGAATTTGATCCGATCACGA+GGG | - | chr8_3:6900967-6900986 | Msa1273160:intron | 40.0% | |
| !! | ACTAGTTGTGATGGATCAAG+TGG | + | chr8_3:6900995-6901014 | None:intergenic | 40.0% |
| GGAAGCAGTCCATGAATATT+TGG | - | chr8_3:6901033-6901052 | Msa1273160:CDS | 40.0% | |
| GGAAATTAGCAGTTTGTGAG+AGG | - | chr8_3:6901102-6901121 | Msa1273160:intron | 40.0% | |
| GATGATGTGTTGTGCAAGAT+TGG | - | chr8_3:6901156-6901175 | Msa1273160:CDS | 40.0% | |
| TGTGTACACATTTAAGTGCC+TGG | - | chr8_3:6901282-6901301 | Msa1273160:five_prime_UTR | 40.0% | |
| GGAGATAAGATGAGAGATAG+AGG | + | chr8_3:6901418-6901437 | None:intergenic | 40.0% | |
| TGAAATGAGGCCAAACGCTT+CGG | - | chr8_3:6897561-6897580 | Msa1273160:three_prime_UTR | 45.0% | |
| ACCGTCGTTTCGTAAAAGCT+CGG | + | chr8_3:6897599-6897618 | None:intergenic | 45.0% | |
| ! | CATCGATGGCGGCATTAAAA+CGG | + | chr8_3:6897642-6897661 | None:intergenic | 45.0% |
| !! | AACCTCAGTGTAAGCATCGA+TGG | + | chr8_3:6897656-6897675 | None:intergenic | 45.0% |
| GAGATGACACAAAGCACGAT+TGG | + | chr8_3:6897810-6897829 | None:intergenic | 45.0% | |
| GCTGGACAGTCATTCTGTTA+AGG | - | chr8_3:6898081-6898100 | Msa1273160:intron | 45.0% | |
| ! | CTCGCTCCTGGTTGATTTAA+TGG | - | chr8_3:6898149-6898168 | Msa1273160:intron | 45.0% |
| ! | AATCCGAATGTAAAGGCACG+TGG | + | chr8_3:6898309-6898328 | None:intergenic | 45.0% |
| CGTGCCTTTACATTCGGATT+AGG | - | chr8_3:6898309-6898328 | Msa1273160:intron | 45.0% | |
| ! | ATTGCAGATCTCTGAGGAGT+TGG | - | chr8_3:6898524-6898543 | Msa1273160:CDS | 45.0% |
| ACACCTGTACATCATCTGAG+AGG | + | chr8_3:6898725-6898744 | None:intergenic | 45.0% | |
| AGGTTTCCACGGAGATTGTT+TGG | + | chr8_3:6898748-6898767 | None:intergenic | 45.0% | |
| ! | CACCCTTGTTGTGTGTTTCA+TGG | - | chr8_3:6899221-6899240 | Msa1273160:intron | 45.0% |
| ! | GGGGAAGGAAGCATAAAATG+TGG | + | chr8_3:6899454-6899473 | None:intergenic | 45.0% |
| ! | CATTTTATGCTTCCTTCCCC+TGG | - | chr8_3:6899454-6899473 | Msa1273160:intron | 45.0% |
| TAAACCACATCCAATCCCAG+GGG | + | chr8_3:6899473-6899492 | None:intergenic | 45.0% | |
| ! | ACACCCTAAGGCAAAGCTTT+TGG | + | chr8_3:6899801-6899820 | None:intergenic | 45.0% |
| GCATCCATGTATATCACGTG+AGG | - | chr8_3:6899897-6899916 | Msa1273160:intron | 45.0% | |
| CATCCCTCACGTGATATACA+TGG | + | chr8_3:6899904-6899923 | None:intergenic | 45.0% | |
| CATGTATATCACGTGAGGGA+TGG | - | chr8_3:6899902-6899921 | Msa1273160:intron | 45.0% | |
| ATATCACGTGAGGGATGGTT+TGG | - | chr8_3:6899907-6899926 | Msa1273160:intron | 45.0% | |
| !! | CTTGCTATTGAGCTGTCAAC+AGG | - | chr8_3:6900083-6900102 | Msa1273160:intron | 45.0% |
| ATTGAGCTGTCAACAGGACA+TGG | - | chr8_3:6900089-6900108 | Msa1273160:intron | 45.0% | |
| TTCATCGTCCCAACGATCAT+GGG | - | chr8_3:6900357-6900376 | Msa1273160:intron | 45.0% | |
| CTGCAATTCCCATGATCGTT+GGG | + | chr8_3:6900368-6900387 | None:intergenic | 45.0% | |
| TCTGCAATTCCCATGATCGT+TGG | + | chr8_3:6900369-6900388 | None:intergenic | 45.0% | |
| CAGCCTCCAACTGTTTCAAA+TGG | + | chr8_3:6900602-6900621 | None:intergenic | 45.0% | |
| AGATGAGGACATACCAACTG+AGG | - | chr8_3:6900647-6900666 | Msa1273160:intron | 45.0% | |
| AGACACATACAGACCTCAGT+TGG | + | chr8_3:6900663-6900682 | None:intergenic | 45.0% | |
| GATCCTGTCATTACTCCTAG+TGG | - | chr8_3:6900805-6900824 | Msa1273160:intron | 45.0% | |
| TGTCCACTAGGAGTAATGAC+AGG | + | chr8_3:6900811-6900830 | None:intergenic | 45.0% | |
| GTGAATTTGATCCGATCACG+AGG | - | chr8_3:6900966-6900985 | Msa1273160:intron | 45.0% | |
| ! | TTCATGGACTGCTTCCCTAA+TGG | + | chr8_3:6901029-6901048 | None:intergenic | 45.0% |
| AGGAAGGAACCACAGCAAAT+TGG | + | chr8_3:6901361-6901380 | None:intergenic | 45.0% | |
| TGAAATGAGGCCAAACGCTT+CGG | - | chr8_3:6897561-6897580 | Msa1273160:three_prime_UTR | 45.0% | |
| ACCGTCGTTTCGTAAAAGCT+CGG | + | chr8_3:6897599-6897618 | None:intergenic | 45.0% | |
| ! | CATCGATGGCGGCATTAAAA+CGG | + | chr8_3:6897642-6897661 | None:intergenic | 45.0% |
| !! | AACCTCAGTGTAAGCATCGA+TGG | + | chr8_3:6897656-6897675 | None:intergenic | 45.0% |
| GAGATGACACAAAGCACGAT+TGG | + | chr8_3:6897810-6897829 | None:intergenic | 45.0% | |
| GCTGGACAGTCATTCTGTTA+AGG | - | chr8_3:6898081-6898100 | Msa1273160:intron | 45.0% | |
| ! | CTCGCTCCTGGTTGATTTAA+TGG | - | chr8_3:6898149-6898168 | Msa1273160:intron | 45.0% |
| ! | AATCCGAATGTAAAGGCACG+TGG | + | chr8_3:6898309-6898328 | None:intergenic | 45.0% |
| CGTGCCTTTACATTCGGATT+AGG | - | chr8_3:6898309-6898328 | Msa1273160:intron | 45.0% | |
| ! | ATTGCAGATCTCTGAGGAGT+TGG | - | chr8_3:6898524-6898543 | Msa1273160:CDS | 45.0% |
| ACACCTGTACATCATCTGAG+AGG | + | chr8_3:6898725-6898744 | None:intergenic | 45.0% | |
| AGGTTTCCACGGAGATTGTT+TGG | + | chr8_3:6898748-6898767 | None:intergenic | 45.0% | |
| ! | CACCCTTGTTGTGTGTTTCA+TGG | - | chr8_3:6899221-6899240 | Msa1273160:intron | 45.0% |
| ! | GGGGAAGGAAGCATAAAATG+TGG | + | chr8_3:6899454-6899473 | None:intergenic | 45.0% |
| ! | CATTTTATGCTTCCTTCCCC+TGG | - | chr8_3:6899454-6899473 | Msa1273160:intron | 45.0% |
| TAAACCACATCCAATCCCAG+GGG | + | chr8_3:6899473-6899492 | None:intergenic | 45.0% | |
| ! | ACACCCTAAGGCAAAGCTTT+TGG | + | chr8_3:6899801-6899820 | None:intergenic | 45.0% |
| GCATCCATGTATATCACGTG+AGG | - | chr8_3:6899897-6899916 | Msa1273160:intron | 45.0% | |
| CATCCCTCACGTGATATACA+TGG | + | chr8_3:6899904-6899923 | None:intergenic | 45.0% | |
| CATGTATATCACGTGAGGGA+TGG | - | chr8_3:6899902-6899921 | Msa1273160:intron | 45.0% | |
| ATATCACGTGAGGGATGGTT+TGG | - | chr8_3:6899907-6899926 | Msa1273160:intron | 45.0% | |
| !! | CTTGCTATTGAGCTGTCAAC+AGG | - | chr8_3:6900083-6900102 | Msa1273160:intron | 45.0% |
| ATTGAGCTGTCAACAGGACA+TGG | - | chr8_3:6900089-6900108 | Msa1273160:intron | 45.0% | |
| TTCATCGTCCCAACGATCAT+GGG | - | chr8_3:6900357-6900376 | Msa1273160:intron | 45.0% | |
| CTGCAATTCCCATGATCGTT+GGG | + | chr8_3:6900368-6900387 | None:intergenic | 45.0% | |
| TCTGCAATTCCCATGATCGT+TGG | + | chr8_3:6900369-6900388 | None:intergenic | 45.0% | |
| CAGCCTCCAACTGTTTCAAA+TGG | + | chr8_3:6900602-6900621 | None:intergenic | 45.0% | |
| AGATGAGGACATACCAACTG+AGG | - | chr8_3:6900647-6900666 | Msa1273160:intron | 45.0% | |
| AGACACATACAGACCTCAGT+TGG | + | chr8_3:6900663-6900682 | None:intergenic | 45.0% | |
| GATCCTGTCATTACTCCTAG+TGG | - | chr8_3:6900805-6900824 | Msa1273160:intron | 45.0% | |
| TGTCCACTAGGAGTAATGAC+AGG | + | chr8_3:6900811-6900830 | None:intergenic | 45.0% | |
| GTGAATTTGATCCGATCACG+AGG | - | chr8_3:6900966-6900985 | Msa1273160:intron | 45.0% | |
| ! | TTCATGGACTGCTTCCCTAA+TGG | + | chr8_3:6901029-6901048 | None:intergenic | 45.0% |
| AGGAAGGAACCACAGCAAAT+TGG | + | chr8_3:6901361-6901380 | None:intergenic | 45.0% | |
| !! | CGGAGAGTACCGATGAAGAA+AGG | + | chr8_3:6897427-6897446 | None:intergenic | 50.0% |
| ! | GCCGAGCTTTTACGAAACGA+CGG | - | chr8_3:6897595-6897614 | Msa1273160:three_prime_UTR | 50.0% |
| !! | CTCAGTGTAAGCATCGATGG+CGG | + | chr8_3:6897653-6897672 | None:intergenic | 50.0% |
| TAGTGAATGGGAGAGGGTTG+AGG | - | chr8_3:6898036-6898055 | Msa1273160:CDS | 50.0% | |
| TCAACCAGGAGCGAGACAAA+AGG | + | chr8_3:6898144-6898163 | None:intergenic | 50.0% | |
| ! | CTGAGCATTGCAGATCTCTG+AGG | - | chr8_3:6898518-6898537 | Msa1273160:CDS | 50.0% |
| TGGTTCCTGGGCTGTGTTAA+AGG | - | chr8_3:6898630-6898649 | Msa1273160:intron | 50.0% | |
| GGTTCCTGGGCTGTGTTAAA+GGG | - | chr8_3:6898631-6898650 | Msa1273160:intron | 50.0% | |
| GTTCCTGGGCTGTGTTAAAG+GGG | - | chr8_3:6898632-6898651 | Msa1273160:intron | 50.0% | |
| TTCCTGGGCTGTGTTAAAGG+GGG | - | chr8_3:6898633-6898652 | Msa1273160:intron | 50.0% | |
| AGGTGTCCAAACAATCTCCG+TGG | - | chr8_3:6898739-6898758 | Msa1273160:intron | 50.0% | |
| CCAGTGGTTTCACCAAACTC+TGG | + | chr8_3:6898994-6899013 | None:intergenic | 50.0% | |
| ! | CCAGAGTTTGGTGAAACCAC+TGG | - | chr8_3:6898991-6899010 | Msa1273160:intron | 50.0% |
| ! | TATTGGGCTAGGGCTTGTAC+TGG | + | chr8_3:6899713-6899732 | None:intergenic | 50.0% |
| AAGCTTTGCCTTAGGGTGTG+TGG | - | chr8_3:6899802-6899821 | Msa1273160:intron | 50.0% | |
| !! | AAAAGCGTCCACACACCCTA+AGG | + | chr8_3:6899813-6899832 | None:intergenic | 50.0% |
| GCACCACACTGAAAATCAGC+AGG | + | chr8_3:6900164-6900183 | None:intergenic | 50.0% | |
| !! | AAGGCTTTGGATCTTGGGAG+AGG | - | chr8_3:6900259-6900278 | Msa1273160:intron | 50.0% |
| !! | AGGCTTTGGATCTTGGGAGA+GGG | - | chr8_3:6900260-6900279 | Msa1273160:intron | 50.0% |
| GGCCAATCCAAAGGGCTATA+TGG | - | chr8_3:6900282-6900301 | Msa1273160:intron | 50.0% | |
| GTTCATCGTCCCAACGATCA+TGG | - | chr8_3:6900356-6900375 | Msa1273160:intron | 50.0% | |
| TCAAGTGGTTCCCTCGTGAT+CGG | + | chr8_3:6900980-6900999 | None:intergenic | 50.0% | |
| !! | CGGAGAGTACCGATGAAGAA+AGG | + | chr8_3:6897427-6897446 | None:intergenic | 50.0% |
| ! | GCCGAGCTTTTACGAAACGA+CGG | - | chr8_3:6897595-6897614 | Msa1273160:three_prime_UTR | 50.0% |
| !! | CTCAGTGTAAGCATCGATGG+CGG | + | chr8_3:6897653-6897672 | None:intergenic | 50.0% |
| TAGTGAATGGGAGAGGGTTG+AGG | - | chr8_3:6898036-6898055 | Msa1273160:CDS | 50.0% | |
| TCAACCAGGAGCGAGACAAA+AGG | + | chr8_3:6898144-6898163 | None:intergenic | 50.0% | |
| ! | CTGAGCATTGCAGATCTCTG+AGG | - | chr8_3:6898518-6898537 | Msa1273160:CDS | 50.0% |
| TGGTTCCTGGGCTGTGTTAA+AGG | - | chr8_3:6898630-6898649 | Msa1273160:intron | 50.0% | |
| GGTTCCTGGGCTGTGTTAAA+GGG | - | chr8_3:6898631-6898650 | Msa1273160:intron | 50.0% | |
| GTTCCTGGGCTGTGTTAAAG+GGG | - | chr8_3:6898632-6898651 | Msa1273160:intron | 50.0% | |
| TTCCTGGGCTGTGTTAAAGG+GGG | - | chr8_3:6898633-6898652 | Msa1273160:intron | 50.0% | |
| AGGTGTCCAAACAATCTCCG+TGG | - | chr8_3:6898739-6898758 | Msa1273160:intron | 50.0% | |
| CCAGTGGTTTCACCAAACTC+TGG | + | chr8_3:6898994-6899013 | None:intergenic | 50.0% | |
| ! | CCAGAGTTTGGTGAAACCAC+TGG | - | chr8_3:6898991-6899010 | Msa1273160:intron | 50.0% |
| ! | TATTGGGCTAGGGCTTGTAC+TGG | + | chr8_3:6899713-6899732 | None:intergenic | 50.0% |
| AAGCTTTGCCTTAGGGTGTG+TGG | - | chr8_3:6899802-6899821 | Msa1273160:intron | 50.0% | |
| !! | AAAAGCGTCCACACACCCTA+AGG | + | chr8_3:6899813-6899832 | None:intergenic | 50.0% |
| GCACCACACTGAAAATCAGC+AGG | + | chr8_3:6900164-6900183 | None:intergenic | 50.0% | |
| !! | AAGGCTTTGGATCTTGGGAG+AGG | - | chr8_3:6900259-6900278 | Msa1273160:intron | 50.0% |
| !! | AGGCTTTGGATCTTGGGAGA+GGG | - | chr8_3:6900260-6900279 | Msa1273160:intron | 50.0% |
| GGCCAATCCAAAGGGCTATA+TGG | - | chr8_3:6900282-6900301 | Msa1273160:intron | 50.0% | |
| GTTCATCGTCCCAACGATCA+TGG | - | chr8_3:6900356-6900375 | Msa1273160:intron | 50.0% | |
| TCAAGTGGTTCCCTCGTGAT+CGG | + | chr8_3:6900980-6900999 | None:intergenic | 50.0% | |
| ! | TGTCTCATCGCCGAAGCGTT+TGG | + | chr8_3:6897574-6897593 | None:intergenic | 55.0% |
| CGCCATCGATGCTTACACTG+AGG | - | chr8_3:6897651-6897670 | Msa1273160:three_prime_UTR | 55.0% | |
| ! | TCCTCCTTTTGTCTCGCTCC+TGG | - | chr8_3:6898137-6898156 | Msa1273160:intron | 55.0% |
| ACCAGGAGCGAGACAAAAGG+AGG | + | chr8_3:6898141-6898160 | None:intergenic | 55.0% | |
| ! | TGCACGCGCGATGCACATTT+TGG | - | chr8_3:6898271-6898290 | Msa1273160:CDS | 55.0% |
| ! | GCACGCGCGATGCACATTTT+GGG | - | chr8_3:6898272-6898291 | Msa1273160:CDS | 55.0% |
| AACCCCCTTTAACACAGCCC+AGG | + | chr8_3:6898638-6898657 | None:intergenic | 55.0% | |
| ATGCTTCCTTCCCCTGGGAT+TGG | - | chr8_3:6899460-6899479 | Msa1273160:intron | 55.0% | |
| !! | GGCTTTGGATCTTGGGAGAG+GGG | - | chr8_3:6900261-6900280 | Msa1273160:intron | 55.0% |
| ATGAGTGCACTCTGCCTCGA+TGG | + | chr8_3:6900923-6900942 | None:intergenic | 55.0% | |
| ! | TGTCTCATCGCCGAAGCGTT+TGG | + | chr8_3:6897574-6897593 | None:intergenic | 55.0% |
| CGCCATCGATGCTTACACTG+AGG | - | chr8_3:6897651-6897670 | Msa1273160:three_prime_UTR | 55.0% | |
| ! | TCCTCCTTTTGTCTCGCTCC+TGG | - | chr8_3:6898137-6898156 | Msa1273160:intron | 55.0% |
| ACCAGGAGCGAGACAAAAGG+AGG | + | chr8_3:6898141-6898160 | None:intergenic | 55.0% | |
| ! | TGCACGCGCGATGCACATTT+TGG | - | chr8_3:6898271-6898290 | Msa1273160:CDS | 55.0% |
| ! | GCACGCGCGATGCACATTTT+GGG | - | chr8_3:6898272-6898291 | Msa1273160:CDS | 55.0% |
| AACCCCCTTTAACACAGCCC+AGG | + | chr8_3:6898638-6898657 | None:intergenic | 55.0% | |
| ATGCTTCCTTCCCCTGGGAT+TGG | - | chr8_3:6899460-6899479 | Msa1273160:intron | 55.0% | |
| !! | GGCTTTGGATCTTGGGAGAG+GGG | - | chr8_3:6900261-6900280 | Msa1273160:intron | 55.0% |
| ATGAGTGCACTCTGCCTCGA+TGG | + | chr8_3:6900923-6900942 | None:intergenic | 55.0% | |
| CCACATCCAATCCCAGGGGA+AGG | + | chr8_3:6899469-6899488 | None:intergenic | 60.0% | |
| CCTTCCCCTGGGATTGGATG+TGG | - | chr8_3:6899466-6899485 | Msa1273160:intron | 60.0% | |
| TGGGAGAGGGGCCAATCCAA+AGG | - | chr8_3:6900273-6900292 | Msa1273160:intron | 60.0% | |
| GGGAGAGGGGCCAATCCAAA+GGG | - | chr8_3:6900274-6900293 | Msa1273160:intron | 60.0% | |
| CCACATCCAATCCCAGGGGA+AGG | + | chr8_3:6899469-6899488 | None:intergenic | 60.0% | |
| CCTTCCCCTGGGATTGGATG+TGG | - | chr8_3:6899466-6899485 | Msa1273160:intron | 60.0% | |
| TGGGAGAGGGGCCAATCCAA+AGG | - | chr8_3:6900273-6900292 | Msa1273160:intron | 60.0% | |
| GGGAGAGGGGCCAATCCAAA+GGG | - | chr8_3:6900274-6900293 | Msa1273160:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 6897373 | 6901454 | 6897373 | ID=Msa1273160;Name=Msa1273160 |
| chr8_3 | mRNA | 6897373 | 6901454 | 6897373 | ID=Msa1273160-mRNA-1;Parent=Msa1273160;Name=Msa1273160-mRNA-1;_AED=0.04;_eAED=0.04;_QI=192|1|1|1|1|1|8|367|277 |
| chr8_3 | exon | 6897373 | 6897865 | 6897373 | ID=Msa1273160-mRNA-1:exon:2709;Parent=Msa1273160-mRNA-1 |
| chr8_3 | exon | 6897957 | 6898067 | 6897957 | ID=Msa1273160-mRNA-1:exon:2708;Parent=Msa1273160-mRNA-1 |
| chr8_3 | exon | 6898159 | 6898309 | 6898159 | ID=Msa1273160-mRNA-1:exon:2707;Parent=Msa1273160-mRNA-1 |
| chr8_3 | exon | 6898432 | 6898565 | 6898432 | ID=Msa1273160-mRNA-1:exon:2706;Parent=Msa1273160-mRNA-1 |
| chr8_3 | exon | 6899623 | 6899694 | 6899623 | ID=Msa1273160-mRNA-1:exon:2705;Parent=Msa1273160-mRNA-1 |
| chr8_3 | exon | 6900725 | 6900788 | 6900725 | ID=Msa1273160-mRNA-1:exon:2704;Parent=Msa1273160-mRNA-1 |
| chr8_3 | exon | 6900990 | 6901057 | 6900990 | ID=Msa1273160-mRNA-1:exon:2703;Parent=Msa1273160-mRNA-1 |
| chr8_3 | exon | 6901155 | 6901454 | 6901155 | ID=Msa1273160-mRNA-1:exon:2702;Parent=Msa1273160-mRNA-1 |
| chr8_3 | five_prime_UTR | 6901263 | 6901454 | 6901263 | ID=Msa1273160-mRNA-1:five_prime_utr;Parent=Msa1273160-mRNA-1 |
| chr8_3 | CDS | 6901155 | 6901262 | 6901155 | ID=Msa1273160-mRNA-1:cds;Parent=Msa1273160-mRNA-1 |
| chr8_3 | CDS | 6900990 | 6901057 | 6900990 | ID=Msa1273160-mRNA-1:cds;Parent=Msa1273160-mRNA-1 |
| chr8_3 | CDS | 6900725 | 6900788 | 6900725 | ID=Msa1273160-mRNA-1:cds;Parent=Msa1273160-mRNA-1 |
| chr8_3 | CDS | 6899623 | 6899694 | 6899623 | ID=Msa1273160-mRNA-1:cds;Parent=Msa1273160-mRNA-1 |
| chr8_3 | CDS | 6898432 | 6898565 | 6898432 | ID=Msa1273160-mRNA-1:cds;Parent=Msa1273160-mRNA-1 |
| chr8_3 | CDS | 6898159 | 6898309 | 6898159 | ID=Msa1273160-mRNA-1:cds;Parent=Msa1273160-mRNA-1 |
| chr8_3 | CDS | 6897957 | 6898067 | 6897957 | ID=Msa1273160-mRNA-1:cds;Parent=Msa1273160-mRNA-1 |
| chr8_3 | CDS | 6897740 | 6897865 | 6897740 | ID=Msa1273160-mRNA-1:cds;Parent=Msa1273160-mRNA-1 |
| chr8_3 | three_prime_UTR | 6897373 | 6897739 | 6897373 | ID=Msa1273160-mRNA-1:three_prime_utr;Parent=Msa1273160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
