AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1315510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1315510 MtrunA17_Chr8g0345201 95.420 524 7 1 1 507 1 524 0.0 1035
Msa1315510 MtrunA17_Chr5g0412871 48.101 474 234 4 44 507 3 474 2.85e-158 458
Msa1315510 MtrunA17_Chr6g0488041 22.911 371 258 14 132 497 86 433 9.73e-18 85.5
Msa1315510 MtrunA17_Chr8g0387481 23.077 351 243 12 141 486 94 422 1.18e-17 85.5
Msa1315510 MtrunA17_Chr8g0360241 21.965 346 218 9 136 468 77 383 2.70e-16 80.9
Msa1315510 MtrunA17_Chr8g0389311 22.642 371 259 14 132 497 78 425 1.72e-15 78.6
Msa1315510 MtrunA17_Chr8g0389321 22.642 371 259 14 132 497 78 425 1.72e-15 78.6
Msa1315510 MtrunA17_Chr6g0475681 21.271 362 258 12 137 494 183 521 7.06e-15 77.0
Msa1315510 MtrunA17_Chr2g0324801 22.515 342 219 11 137 468 46 351 1.03e-14 75.9
Msa1315510 MtrunA17_Chr7g0248681 21.833 371 262 12 132 497 84 431 3.41e-14 74.7
Msa1315510 MtrunA17_Chr5g0400831 22.193 374 265 12 132 497 77 432 2.27e-13 72.4
Msa1315510 MtrunA17_Chr8g0348351 23.881 335 230 11 165 497 119 430 2.66e-13 72.0
Msa1315510 MtrunA17_Chr3g0135251 24.026 308 207 12 163 465 109 394 5.65e-13 70.9
Msa1315510 MtrunA17_Chr5g0398431 21.922 333 237 11 163 494 178 488 8.65e-13 70.5
Msa1315510 MtrunA17_Chr4g0004131 25.948 343 194 15 137 468 64 357 1.14e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1315510 AT1G72330.1 74.535 538 97 3 10 507 3 540 0.0 826
Msa1315510 AT1G72330.3 72.777 551 97 4 10 507 3 553 0.0 817
Msa1315510 AT1G17290.1 81.667 480 71 1 45 507 64 543 0.0 796
Msa1315510 AT1G72330.2 71.744 407 75 3 10 376 3 409 0.0 589
Msa1315510 AT1G70580.4 49.784 464 225 3 51 507 12 474 2.73e-160 464
Msa1315510 AT1G70580.2 49.784 464 225 3 51 507 12 474 2.73e-160 464
Msa1315510 AT1G70580.3 49.784 464 225 3 51 507 12 474 2.73e-160 464
Msa1315510 AT1G70580.1 49.784 464 225 3 51 507 12 474 2.73e-160 464
Msa1315510 AT1G23310.1 51.724 435 208 2 72 505 39 472 1.27e-159 462
Msa1315510 AT1G23310.2 52.736 402 188 2 72 472 39 439 3.84e-147 429
Msa1315510 AT1G62960.1 23.324 373 263 11 125 494 194 546 1.14e-19 92.8
Msa1315510 AT5G51690.2 23.784 370 253 15 137 501 25 370 1.25e-18 88.2
Msa1315510 AT5G51690.1 23.529 374 257 15 133 501 144 493 1.61e-18 89.0
Msa1315510 AT4G28410.1 23.864 352 240 9 118 468 87 411 2.50e-18 87.8
Msa1315510 AT4G11280.1 23.925 372 257 12 137 504 93 442 2.51e-18 88.2
Msa1315510 AT2G24850.1 22.133 375 244 11 136 500 86 422 2.51e-18 87.8
Msa1315510 AT4G28410.2 23.647 351 240 9 118 467 87 410 2.82e-18 87.4
Msa1315510 AT4G28420.2 21.684 392 250 12 125 502 86 434 3.52e-17 84.3
Msa1315510 AT5G36160.1 22.016 377 263 11 125 500 68 414 3.65e-17 84.0
Msa1315510 AT2G28815.1 46.154 104 24 3 401 504 63 134 3.50e-16 79.7
Msa1315510 AT2G20610.1 22.135 384 260 12 119 497 86 435 3.65e-16 81.3
Msa1315510 AT4G26200.1 21.693 378 266 13 130 500 89 443 3.71e-16 81.3
Msa1315510 AT5G53970.1 22.857 350 232 10 125 468 59 376 5.26e-16 80.5
Msa1315510 AT4G37770.1 23.342 377 252 13 132 497 77 427 6.43e-16 80.5
Msa1315510 AT4G23590.1 21.226 424 278 16 90 500 27 407 8.05e-16 80.1
Msa1315510 AT4G28420.1 21.905 315 199 9 125 425 86 367 8.22e-16 79.7
Msa1315510 AT3G61510.1 22.493 369 253 14 135 497 87 428 2.62e-15 79.0
Msa1315510 AT2G20610.2 21.937 351 238 10 119 464 86 405 3.20e-15 78.2
Msa1315510 AT4G08040.1 24.709 344 231 14 127 465 70 390 2.16e-14 75.9
Msa1315510 AT4G23600.1 21.447 387 249 16 97 469 34 379 2.98e-13 72.0
Msa1315510 AT3G49700.1 23.836 365 247 13 141 497 86 427 1.93e-12 69.7
Msa1315510 AT1G01480.1 21.978 364 261 11 141 500 94 438 4.89e-12 68.6
Msa1315510 AT4G23600.3 21.204 382 246 16 97 464 34 374 1.01e-11 67.0
Msa1315510 AT5G65800.1 22.727 374 258 13 132 497 77 427 1.45e-11 67.0
Msa1315510 AT1G01480.2 22.024 336 241 10 167 500 16 332 2.15e-11 66.2

Find 152 sgRNAs with CRISPR-Local

Find 496 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAAGAAGGTTTGGTTCTTT+TGG 0.206185 8_4:-14986555 Msa1315510:CDS
CACCTGCCCTGTTGGATTGC+CGG 0.219208 8_4:+14986728 None:intergenic
TGCTCCTTCTGCTTTGTTGC+AGG 0.238077 8_4:+14985369 None:intergenic
ATTTCCATATCAGGGTATTC+AGG 0.251842 8_4:-14988056 Msa1315510:intron
CCTTCGTTCTTTGTCTTCAA+TGG 0.266946 8_4:-14991234 Msa1315510:CDS
ATGTGACTATCCTGCTCTTT+TGG 0.267249 8_4:-14988786 Msa1315510:CDS
CCTATCTTCTTGAGGTAATA+TGG 0.270115 8_4:+14984744 None:intergenic
ATTGTTGTTGTTCCTGGTTC+TGG 0.272343 8_4:-14985235 Msa1315510:CDS
GGCACACCCCTTAAATTTAT+AGG 0.275408 8_4:+14984631 None:intergenic
ACCTGCCCTGTTGGATTGCC+GGG 0.285128 8_4:+14986729 None:intergenic
GCACACCCCTTAAATTTATA+GGG 0.286667 8_4:+14984632 None:intergenic
GTTGTTCCTGGTTCTGGTTT+TGG 0.293635 8_4:-14985229 Msa1315510:CDS
TGGAAAGCGAGGAGGTTATA+TGG 0.296188 8_4:-14985946 Msa1315510:CDS
ACTGGAATTGTTGTTGTTCC+TGG 0.300917 8_4:-14985241 Msa1315510:CDS
AGTCCAAGGGCATCAGTGTT+AGG 0.320042 8_4:-14986770 Msa1315510:CDS
AAGTAAGCGTTTGCAATAGA+AGG 0.322961 8_4:+14985270 None:intergenic
AATCCGCTGCAGACAGATTC+AGG 0.324640 8_4:-14991322 Msa1315510:CDS
TAGGCACCAGTTGCTCTTCC+AGG 0.325169 8_4:+14988172 None:intergenic
TAAATTTGTTCCCTCACATC+TGG 0.331054 8_4:+14985906 None:intergenic
ATTGATATATTTAACATTGA+TGG 0.342814 8_4:-14984606 Msa1315510:three_prime_UTR
AAAGAGTGAAATTTCTTCTC+AGG 0.347700 8_4:+14986164 None:intergenic
TCAATGTTAAATATATCAAT+TGG 0.351109 8_4:+14984609 None:intergenic
GTTGCTTCATCAAGATAATA+TGG 0.353298 8_4:+14986843 None:intergenic
GATACGTCTCAACAATTCAT+AGG 0.375165 8_4:-14991473 None:intergenic
AGAAGCTTTAAACAAATTAG+AGG 0.385150 8_4:-14985398 Msa1315510:CDS
GTGAAACACAGGGTTTGTTC+AGG 0.393334 8_4:-14988757 Msa1315510:intron
TCTTGATGAAGCAACTGGTT+GGG 0.394854 8_4:-14986835 Msa1315510:CDS
CTTGATGAAGCAACTGGTTG+GGG 0.405077 8_4:-14986834 Msa1315510:CDS
TTCCGCATTGTGTGGTGTGA+TGG 0.410100 8_4:+14991344 None:intergenic
TAGATAATTTACTGCAACAT+TGG 0.412151 8_4:-14988950 Msa1315510:CDS
TTGCAGCTCACCTGCCCTGT+TGG 0.421430 8_4:+14986720 None:intergenic
TGAGTAATTGCATCATCATA+TGG 0.423018 8_4:+14987818 None:intergenic
ATAAACCCCGGCAATCCAAC+AGG 0.423770 8_4:-14986735 Msa1315510:CDS
CAATACCTGACTATGACTAT+AGG 0.434197 8_4:+14988153 None:intergenic
CCATATTACCTCAAGAAGAT+AGG 0.434491 8_4:-14984744 Msa1315510:CDS
ATCTGTCAAGAAAATGTCAT+TGG 0.442497 8_4:+14987976 None:intergenic
CAGATCCCTGGAAGAGCAAC+TGG 0.442624 8_4:-14988178 Msa1315510:CDS
CGAGTCTTATGAGTCATTCA+TGG 0.442957 8_4:-14985609 Msa1315510:CDS
TATTATCTTGATGAAGCAAC+TGG 0.443419 8_4:-14986840 Msa1315510:CDS
TGCTCAAAATATTAACCCTC+AGG 0.447339 8_4:-14991186 Msa1315510:intron
TTGATATATTTAACATTGAT+GGG 0.448735 8_4:-14984605 Msa1315510:three_prime_UTR
TCATCAAACGAATGAGCATC+TGG 0.451967 8_4:+14989677 None:intergenic
TCGGATTCGCCTGCCTGAAA+AGG 0.452019 8_4:-14985332 Msa1315510:CDS
TTTCCATATCAGGGTATTCA+GGG 0.458818 8_4:-14988055 Msa1315510:intron
GGCTGCTGGCCTAGAGATTG+AGG 0.460510 8_4:+14988923 None:intergenic
GTTTGGCTTCAGGCTATCAC+GGG 0.460932 8_4:-14985974 Msa1315510:intron
TTTATATATTGTGAGAAAGA+TGG 0.462970 8_4:+14991368 None:intergenic
ACCTCAAGAAGATAGGATTC+CGG 0.467686 8_4:-14984737 Msa1315510:CDS
TGTTTGGCTTCAGGCTATCA+CGG 0.469517 8_4:-14985975 Msa1315510:intron
AACACTGATGCCCTTGGACT+TGG 0.471424 8_4:+14986773 None:intergenic
CTTTCAAGGTTCCCGGCACA+TGG 0.473583 8_4:-14984780 Msa1315510:intron
GTCAAGCGGGTGACAATGGC+CGG 0.476132 8_4:+14984718 None:intergenic
TACCCTCCATGGTGGCCAGC+TGG 0.480341 8_4:-14987731 Msa1315510:intron
GTATCTCGGTCCATGGGATA+CGG 0.483453 8_4:-14986134 Msa1315510:CDS
CAAATTGTGGATCAGATCCC+TGG 0.483599 8_4:-14988190 Msa1315510:CDS
CGTTTGCAATAGAAGGCATC+AGG 0.485052 8_4:+14985277 None:intergenic
GTCCAAGGGCATCAGTGTTA+GGG 0.485526 8_4:-14986769 Msa1315510:CDS
GAAATTTCACTCTTTCAAGA+AGG 0.487439 8_4:-14986156 Msa1315510:CDS
AGCCCTAACACTGATGCCCT+TGG 0.492947 8_4:+14986767 None:intergenic
AAATTTGTTCCCTCACATCT+GGG 0.493584 8_4:+14985907 None:intergenic
TCCGCATTGTGTGGTGTGAT+GGG 0.493883 8_4:+14991345 None:intergenic
ATTACTCATTAGATCAGAAA+AGG 0.495437 8_4:-14987803 Msa1315510:CDS
CAAGAAGGTATCTCGGTCCA+TGG 0.500046 8_4:-14986141 Msa1315510:CDS
TCTTGCTGAGGAAAATCAAC+GGG 0.500346 8_4:-14986597 Msa1315510:CDS
CACCTAAAATGCCATGTGCC+GGG 0.501375 8_4:+14984769 None:intergenic
GGAGGTTATATGGAGGTGAC+TGG 0.502434 8_4:-14985936 Msa1315510:CDS
CTGATTCAATAGAGAGAGCT+TGG 0.502786 8_4:-14988213 Msa1315510:CDS
ATCTTGATGAAGCAACTGGT+TGG 0.502802 8_4:-14986836 Msa1315510:CDS
TGCAATAGCCGCTGGAATTG+AGG 0.504928 8_4:-14988023 Msa1315510:CDS
CTCTGTCAAGCGGGTGACAA+TGG 0.505154 8_4:+14984714 None:intergenic
AATCTTTGTTCTAACATCAC+TGG 0.506748 8_4:-14985867 Msa1315510:CDS
CAATGTTAAATATATCAATT+GGG 0.509624 8_4:+14984610 None:intergenic
CCTGCCCTGTTGGATTGCCG+GGG 0.514783 8_4:+14986730 None:intergenic
TGGTGCCTATAGTCATAGTC+AGG 0.517915 8_4:-14988158 Msa1315510:intron
ATCATTGTCGCCGTATCCCA+TGG 0.518872 8_4:+14986124 None:intergenic
ACTCTTTCAAGAAGGTATCT+CGG 0.524240 8_4:-14986148 Msa1315510:CDS
ATTGGAAATCCTCAATCTCT+AGG 0.525521 8_4:-14988932 Msa1315510:CDS
TTTGATCATGAGTCCTCCTA+AGG 0.526622 8_4:-14985829 Msa1315510:intron
AAACGAATGAGCATCTGGAT+TGG 0.528171 8_4:+14989682 None:intergenic
ATCTGAACTCAAGAAGCAGT+TGG 0.529742 8_4:-14986802 Msa1315510:CDS
GAGCAATGTATCTGTTTCCT+CGG 0.534079 8_4:-14985351 Msa1315510:CDS
TAGAGAGGGTACTGAGGGAT+GGG 0.535149 8_4:+14987766 None:intergenic
AGAGAGAGCTTGGCAAATTG+TGG 0.538808 8_4:-14988203 Msa1315510:CDS
GCCACCATGGAGGGTAATTG+AGG 0.538881 8_4:+14987738 None:intergenic
TTACGTGATGCAATAGCCGC+TGG 0.539193 8_4:-14988031 Msa1315510:CDS
TTCCCTTGCTACGCGTGCAA+AGG 0.542143 8_4:-14985564 Msa1315510:intron
GACAAAGAACGAAGGGGAGA+AGG 0.545190 8_4:+14991242 None:intergenic
TAACCTTTGCACGCGTAGCA+AGG 0.548318 8_4:+14985561 None:intergenic
GAGGGAACAAATTTATAAAG+TGG 0.548832 8_4:-14985898 Msa1315510:CDS
GAGAAGGATGGTGATACTGT+TGG 0.552996 8_4:+14991258 None:intergenic
GTAATTGAGGCTGAATAGAG+AGG 0.554085 8_4:+14987751 None:intergenic
AACCTTTGCACGCGTAGCAA+GGG 0.554367 8_4:+14985562 None:intergenic
TGAGTCATTCATGGCTGAGA+AGG 0.555179 8_4:-14985600 Msa1315510:CDS
TACCAGCTGGCCACCATGGA+GGG 0.557336 8_4:+14987729 None:intergenic
GTTGGAAGATGCCAAGTCCA+AGG 0.558140 8_4:-14986784 Msa1315510:CDS
AAAATGTCATTGGCATTACA+AGG 0.558712 8_4:+14987986 None:intergenic
TCAGCCTCAATTACCCTCCA+TGG 0.559522 8_4:-14987742 Msa1315510:CDS
GAAGCTTTAAACAAATTAGA+GGG 0.560738 8_4:-14985397 Msa1315510:CDS
TACCGACTTACCTTTGGAGA+CGG 0.565061 8_4:+14986079 None:intergenic
GGCAAAGGGTTAACCTTAGG+AGG 0.566598 8_4:+14985816 None:intergenic
GCACCTAAAATGCCATGTGC+CGG 0.567511 8_4:+14984768 None:intergenic
TCAGGCTATCACGGGGAGTG+TGG 0.570035 8_4:-14985966 Msa1315510:intron
TTTGGACAAAAGTGAAACAC+AGG 0.570857 8_4:-14988768 Msa1315510:CDS
GTTACATGCTGAAAGAAACT+AGG 0.578053 8_4:-14984503 Msa1315510:three_prime_UTR
CACACCCCTTAAATTTATAG+GGG 0.578462 8_4:+14984633 None:intergenic
AGGCACCAGTTGCTCTTCCA+GGG 0.581572 8_4:+14988173 None:intergenic
AAACGCTTACTTAATGCCAC+TGG 0.581835 8_4:-14985259 Msa1315510:CDS
CATTGAAGACAAAGAACGAA+GGG 0.582881 8_4:+14991235 None:intergenic
TTGATGGAACTCTGTCAAGC+GGG 0.587857 8_4:+14984705 None:intergenic
ATAGAGAGGGTACTGAGGGA+TGG 0.592245 8_4:+14987765 None:intergenic
AAGAAGGTATCTCGGTCCAT+GGG 0.592457 8_4:-14986140 Msa1315510:CDS
ACTTTACCAGCTGGCCACCA+TGG 0.594947 8_4:+14987725 None:intergenic
GAGGTTATATGGAGGTGACT+GGG 0.595186 8_4:-14985935 Msa1315510:CDS
CACGGGGAGTGTGGAAAGCG+AGG 0.595737 8_4:-14985957 Msa1315510:CDS
AGATGCTCATTCGTTTGATG+AGG 0.599601 8_4:-14989675 Msa1315510:intron
GTAACCTGCAACAAAGCAGA+AGG 0.602222 8_4:-14985373 Msa1315510:CDS
GAGTCATTCATGGCTGAGAA+GGG 0.602471 8_4:-14985599 Msa1315510:CDS
GCTTTAGCTGTTATAAACCC+CGG 0.604551 8_4:-14986747 Msa1315510:CDS
CTCATTAGATCAGAAAAGGA+TGG 0.606155 8_4:-14987799 Msa1315510:CDS
GCCGGAATCCTATCTTCTTG+AGG 0.606322 8_4:+14984736 None:intergenic
CTGAATAGAGAGGGTACTGA+GGG 0.609191 8_4:+14987761 None:intergenic
TTGGAAGATGCCAAGTCCAA+GGG 0.616464 8_4:-14986783 Msa1315510:CDS
TTTGATGGAACTCTGTCAAG+CGG 0.619051 8_4:+14984704 None:intergenic
TTCTTGCTGAGGAAAATCAA+CGG 0.620444 8_4:-14986598 Msa1315510:CDS
ACCTGTCCAAAACCAGAACC+AGG 0.621813 8_4:+14985223 None:intergenic
GCTGAATAGAGAGGGTACTG+AGG 0.624000 8_4:+14987760 None:intergenic
CAGCGGATTTCCGCATTGTG+TGG 0.629122 8_4:+14991336 None:intergenic
GCAATAGAAGGCATCAGGTG+CGG 0.630196 8_4:+14985282 None:intergenic
GCTGGAATTGAGGAGCGCGA+TGG 0.630272 8_4:-14988013 Msa1315510:CDS
CCATTGAAGACAAAGAACGA+AGG 0.630660 8_4:+14991234 None:intergenic
ATGCCTGAATCTGTCTGCAG+CGG 0.634809 8_4:+14991319 None:intergenic
AAGAACGAAGGGGAGAAGGA+TGG 0.635915 8_4:+14991246 None:intergenic
AAAGGCTATCAAAGCTGCAG+AGG 0.637012 8_4:-14985314 Msa1315510:CDS
TTACCAGCTGGCCACCATGG+AGG 0.637475 8_4:+14987728 None:intergenic
TAATTGAGGCTGAATAGAGA+GGG 0.644456 8_4:+14987752 None:intergenic
AATTTGTTCCCTCACATCTG+GGG 0.645832 8_4:+14985908 None:intergenic
ACCCATCACACCACACAATG+CGG 0.649029 8_4:-14991346 Msa1315510:exon
ACACCCCTTAAATTTATAGG+GGG 0.654945 8_4:+14984634 None:intergenic
AAAGCGAGGAGGTTATATGG+AGG 0.681303 8_4:-14985943 Msa1315510:CDS
TTGATGAAGCAACTGGTTGG+GGG 0.682358 8_4:-14986833 Msa1315510:CDS
TTGGACAAAAGTGAAACACA+GGG 0.683072 8_4:-14988767 Msa1315510:CDS
GCCTCAATTACCCTCCATGG+TGG 0.683447 8_4:-14987739 Msa1315510:CDS
TAAACCCCGGCAATCCAACA+GGG 0.689339 8_4:-14986734 Msa1315510:CDS
AGGAACAACAACAATTCCAG+TGG 0.692125 8_4:+14985243 None:intergenic
TTTGGCTTCAGGCTATCACG+GGG 0.695438 8_4:-14985973 Msa1315510:intron
ATGTCTGTAGGTTCTTGCTG+AGG 0.696225 8_4:-14986609 Msa1315510:intron
TTAAGGACAGAAAAGAACAG+AGG 0.697261 8_4:+14984381 None:intergenic
GGGGAGTGTGGAAAGCGAGG+AGG 0.705425 8_4:-14985954 Msa1315510:CDS
ATTGAAGACAAAGAACGAAG+GGG 0.709504 8_4:+14991236 None:intergenic
ATCGCGCTCCTCAATTCCAG+CGG 0.721398 8_4:+14988015 None:intergenic
TGCGAAGTTGAAAAGTAACG+TGG 0.724434 8_4:+14991404 None:intergenic
GCGAAGTTGAAAAGTAACGT+GGG 0.752268 8_4:+14991405 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAATAAATTTTTCTTTAAG+AGG + chr8_4:14990060-14990079 None:intergenic 10.0%
!!! CTTAAAGAAAAATTTATTTT+TGG - chr8_4:14990060-14990079 Msa1315510:intron 10.0%
!!! ATTAGTTTATAATCAATAAA+AGG + chr8_4:14991032-14991051 None:intergenic 10.0%
!! AAAACAAAAAATAACAATCA+AGG + chr8_4:14985001-14985020 None:intergenic 15.0%
!!! GATTGTTATTTTTTGTTTTT+AGG - chr8_4:14985002-14985021 Msa1315510:intron 15.0%
!! CAAACAAACTTATAAATTAA+GGG + chr8_4:14985139-14985158 None:intergenic 15.0%
!! ACAAACAAACTTATAAATTA+AGG + chr8_4:14985140-14985159 None:intergenic 15.0%
!!! GTATTTGGTTTTTTTATTAT+CGG - chr8_4:14986232-14986251 Msa1315510:intron 15.0%
!!! TATTTGGTTTTTTTATTATC+GGG - chr8_4:14986233-14986252 Msa1315510:intron 15.0%
!! TAATTTATAAAGACAATAAG+AGG + chr8_4:14987576-14987595 None:intergenic 15.0%
!!! GTTTATCATATTTGATAATA+TGG - chr8_4:14989210-14989229 Msa1315510:intron 15.0%
!!! AATACATCAAAATATTTTGA+TGG + chr8_4:14990754-14990773 None:intergenic 15.0%
!!! AGAAAATTTTACACTAATAT+TGG - chr8_4:14990916-14990935 Msa1315510:intron 15.0%
!! ATATTTACTTACAATTTCAT+TGG + chr8_4:14990942-14990961 None:intergenic 15.0%
!!! ATTTAAATTTTTGTCTTTCA+AGG - chr8_4:14991058-14991077 Msa1315510:intron 15.0%
!! CAATGTTAAATATATCAATT+GGG + chr8_4:14991245-14991264 None:intergenic 15.0%
!! TCAATGTTAAATATATCAAT+TGG + chr8_4:14991246-14991265 None:intergenic 15.0%
!! ATTGATATATTTAACATTGA+TGG - chr8_4:14991246-14991265 Msa1315510:CDS 15.0%
!! TTGATATATTTAACATTGAT+GGG - chr8_4:14991247-14991266 Msa1315510:CDS 15.0%
!! TTTATATATTGTGAGAAAGA+TGG + chr8_4:14984487-14984506 None:intergenic 20.0%
!! TAATAAAAAACAAAACCTGA+GGG + chr8_4:14984684-14984703 None:intergenic 20.0%
!!! GCTTTTTCAATTTTTTTATG+TGG - chr8_4:14984791-14984810 Msa1315510:intron 20.0%
!! TGCAAAATTGATGTAATTAT+TGG - chr8_4:14984951-14984970 Msa1315510:intron 20.0%
!! GCAAAATTGATGTAATTATT+GGG - chr8_4:14984952-14984971 Msa1315510:intron 20.0%
!! CAAAATTGATGTAATTATTG+GGG - chr8_4:14984953-14984972 Msa1315510:intron 20.0%
!! AAAATTGATGTAATTATTGG+GGG - chr8_4:14984954-14984973 Msa1315510:intron 20.0%
!!! TTATTTTTTGTTTTTAGGTG+TGG - chr8_4:14985007-14985026 Msa1315510:intron 20.0%
!!! TAAGCTTTTTATTGAATTAG+TGG - chr8_4:14985207-14985226 Msa1315510:intron 20.0%
!!! AAGCTTTTTATTGAATTAGT+GGG - chr8_4:14985208-14985227 Msa1315510:intron 20.0%
!!! AATTAGTGGGTTTTTAATTT+TGG - chr8_4:14985221-14985240 Msa1315510:intron 20.0%
!!! ATTAGTGGGTTTTTAATTTT+GGG - chr8_4:14985222-14985241 Msa1315510:intron 20.0%
!!! TTTTAATTTTGGGGTTTATA+AGG - chr8_4:14985232-14985251 Msa1315510:CDS 20.0%
!!! TTTAATTTTGGGGTTTATAA+GGG - chr8_4:14985233-14985252 Msa1315510:CDS 20.0%
!!! AAAACAGTTTTGTTAAATTG+CGG - chr8_4:14985839-14985858 Msa1315510:CDS 20.0%
!! TACTAAGTTTCTAATTATAG+TGG - chr8_4:14987148-14987167 Msa1315510:intron 20.0%
!!! ACTATCATTTCTCTATTTTT+AGG - chr8_4:14988010-14988029 Msa1315510:CDS 20.0%
!!! CGCAAATCATAATTTAATTT+AGG - chr8_4:14988167-14988186 Msa1315510:CDS 20.0%
!! AGAATACAAATCAGAAAAAA+TGG - chr8_4:14988431-14988450 Msa1315510:intron 20.0%
!! GTTGGAAATATATAGAAAAA+TGG + chr8_4:14988865-14988884 None:intergenic 20.0%
!!! TTTGAACAAACCATTATTTT+CGG - chr8_4:14989550-14989569 Msa1315510:intron 20.0%
!!! GGTTATAATTCTTAATTTTG+TGG - chr8_4:14990081-14990100 Msa1315510:intron 20.0%
!! GTAAAACTCAATATCAAATT+AGG + chr8_4:14990174-14990193 None:intergenic 20.0%
!! TAATGTATAAAAGAATTGCT+AGG + chr8_4:14990321-14990340 None:intergenic 20.0%
!! TGTAATTACTTTACTGTTTA+TGG + chr8_4:14990355-14990374 None:intergenic 20.0%
!! CAATGCATTTACAAATAAAT+CGG + chr8_4:14990666-14990685 None:intergenic 20.0%
!!! TCTCATTTTATCTACAATTA+GGG - chr8_4:14990721-14990740 Msa1315510:intron 20.0%
!!! TAAAATCTTTTAAAAGTCAC+TGG + chr8_4:14990835-14990854 None:intergenic 20.0%
!!! TAATATTTTGAGCAGTAACA+GGG + chr8_4:14984660-14984679 None:intergenic 25.0%
!!! TTAATATTTTGAGCAGTAAC+AGG + chr8_4:14984661-14984680 None:intergenic 25.0%
! GTAATAAAAAACAAAACCTG+AGG + chr8_4:14984685-14984704 None:intergenic 25.0%
! ACTGAAAAACAAGAATCAAA+GGG + chr8_4:14984707-14984726 None:intergenic 25.0%
!! TTGAACTTTCAGTTTTTGAT+TGG - chr8_4:14985044-14985063 Msa1315510:intron 25.0%
!!! TGAACTTTCAGTTTTTGATT+GGG - chr8_4:14985045-14985064 Msa1315510:intron 25.0%
! ATGCTTCTGTAATTACATAA+GGG - chr8_4:14985090-14985109 Msa1315510:intron 25.0%
!! TGTAATTACATAAGGGTTTT+GGG - chr8_4:14985097-14985116 Msa1315510:intron 25.0%
!!! TTAGTGGGTTTTTAATTTTG+GGG - chr8_4:14985223-14985242 Msa1315510:intron 25.0%
!! TGTAGTTTTTGCTAAAATTG+TGG - chr8_4:14985526-14985545 Msa1315510:intron 25.0%
! CGACAAAAACTATTCTTTAT+TGG - chr8_4:14985644-14985663 Msa1315510:intron 25.0%
!!! TTGGTGAAGTATTATGTTTT+TGG - chr8_4:14985663-14985682 Msa1315510:intron 25.0%
!!! TGGTGAAGTATTATGTTTTT+GGG - chr8_4:14985664-14985683 Msa1315510:intron 25.0%
!!! ATTTTGAATCAGTGTTTTGA+TGG + chr8_4:14985975-14985994 None:intergenic 25.0%
! GATAACATGTTATATCTACA+AGG + chr8_4:14986548-14986567 None:intergenic 25.0%
! TAGCATGTTGTTATATAGAT+TGG + chr8_4:14986594-14986613 None:intergenic 25.0%
!! TTCTACACTGATTGATAAAT+AGG + chr8_4:14986642-14986661 None:intergenic 25.0%
! TAGATAATTTACTGCAACAT+TGG - chr8_4:14986902-14986921 Msa1315510:intron 25.0%
!! TTGTTTCTTACAATTCTGTA+TGG - chr8_4:14986973-14986992 Msa1315510:intron 25.0%
!!! CAATTACAATTTTGATACTG+TGG + chr8_4:14987235-14987254 None:intergenic 25.0%
!! CATTTTTACAATGTTGTACT+CGG - chr8_4:14987285-14987304 Msa1315510:intron 25.0%
! ACTTTGTACTAAATAGTGTA+TGG + chr8_4:14987447-14987466 None:intergenic 25.0%
!! AAATTATGTTTTTCCTAGTG+TGG - chr8_4:14987590-14987609 Msa1315510:intron 25.0%
! ATTGATTGGGTTATCTAATT+TGG - chr8_4:14987718-14987737 Msa1315510:intron 25.0%
! GAAAATTATCGAAAGCAAAT+TGG + chr8_4:14987925-14987944 None:intergenic 25.0%
! ATTACTCATTAGATCAGAAA+AGG - chr8_4:14988049-14988068 Msa1315510:intron 25.0%
! AAATCAGAAAAAATGGTCTA+TGG - chr8_4:14988438-14988457 Msa1315510:intron 25.0%
! ACAAATATGCATGTATCATT+GGG - chr8_4:14988489-14988508 Msa1315510:intron 25.0%
!!! CTTGTTACTTTGAAAATCTT+AGG - chr8_4:14988521-14988540 Msa1315510:intron 25.0%
! AATAAAAAATCCTCCTCATT+TGG - chr8_4:14988662-14988681 Msa1315510:intron 25.0%
! ATAAAAAATCCTCCTCATTT+GGG - chr8_4:14988663-14988682 Msa1315510:intron 25.0%
!! GAGCTATGCTTTTATATTAT+GGG - chr8_4:14988940-14988959 Msa1315510:CDS 25.0%
!! AGCTATGCTTTTATATTATG+GGG - chr8_4:14988941-14988960 Msa1315510:CDS 25.0%
!!! GATTTTGTTATTGTTTCTGA+AGG - chr8_4:14988984-14989003 Msa1315510:intron 25.0%
!! TTACAATGGAGTGTTAATAT+AGG - chr8_4:14989156-14989175 Msa1315510:intron 25.0%
! TACAAAATATCCTCAAATAG+CGG - chr8_4:14989507-14989526 Msa1315510:intron 25.0%
!!! ATTTTTTTGTTGAAACCATG+TGG - chr8_4:14989599-14989618 Msa1315510:intron 25.0%
!! GACTTTTATGTTATGCTAAT+AGG - chr8_4:14989828-14989847 Msa1315510:intron 25.0%
!!! ATTTTTCTTTAAGAGGCAAA+GGG + chr8_4:14990053-14990072 None:intergenic 25.0%
!!! AATTTTTCTTTAAGAGGCAA+AGG + chr8_4:14990054-14990073 None:intergenic 25.0%
! TTCTGAATTTACTCATTGTT+GGG + chr8_4:14990394-14990413 None:intergenic 25.0%
! TTTCTGAATTTACTCATTGT+TGG + chr8_4:14990395-14990414 None:intergenic 25.0%
!!! AGAAGCTTTAAACAAATTAG+AGG - chr8_4:14990454-14990473 Msa1315510:intron 25.0%
!!! GAAGCTTTAAACAAATTAGA+GGG - chr8_4:14990455-14990474 Msa1315510:intron 25.0%
! CTAATTGTAGATAAAATGAG+AGG + chr8_4:14990722-14990741 None:intergenic 25.0%
!! CTCTCATTTTATCTACAATT+AGG - chr8_4:14990720-14990739 Msa1315510:intron 25.0%
!!! GTATTGACAACTTTGTTTTT+TGG - chr8_4:14990769-14990788 Msa1315510:intron 25.0%
!! TTTTTCCCCCTATAAATTTA+AGG - chr8_4:14991213-14991232 Msa1315510:CDS 25.0%
!! TTTTCCCCCTATAAATTTAA+GGG - chr8_4:14991214-14991233 Msa1315510:CDS 25.0%
CACTGAAAAACAAGAATCAA+AGG + chr8_4:14984708-14984727 None:intergenic 30.0%
!!! CTTTGATTCTTGTTTTTCAG+TGG - chr8_4:14984706-14984725 Msa1315510:CDS 30.0%
ATGCTTCTGTGATTACATAA+GGG - chr8_4:14984830-14984849 Msa1315510:intron 30.0%
!!! TTACATAAGGGTTTTGGATT+TGG - chr8_4:14984842-14984861 Msa1315510:intron 30.0%
ATTTGCATGCAAAATTGATG+TGG - chr8_4:14984903-14984922 Msa1315510:intron 30.0%
! ATCAATTTTGCATCAACAGT+TGG + chr8_4:14984943-14984962 None:intergenic 30.0%
!! GAACTTTCAGTTTTTGATTG+GGG - chr8_4:14985046-14985065 Msa1315510:intron 30.0%
GATGCTTCTGTAATTACATA+AGG - chr8_4:14985089-14985108 Msa1315510:intron 30.0%
! CTGTAATTACATAAGGGTTT+TGG - chr8_4:14985096-14985115 Msa1315510:intron 30.0%
TTGTATGCAAAATTGATGTG+TGG - chr8_4:14985164-14985183 Msa1315510:intron 30.0%
!!! CTGATCTTTTGTTTTTGCTT+TGG - chr8_4:14985295-14985314 Msa1315510:CDS 30.0%
!! TTTTTGCTTTGGTTTCTGTT+TGG - chr8_4:14985306-14985325 Msa1315510:CDS 30.0%
! TTTTGGCAAAAGACATGTTA+TGG - chr8_4:14985432-14985451 Msa1315510:intron 30.0%
! AGTTTTTGCTAAAATTGTGG+CGG - chr8_4:14985529-14985548 Msa1315510:intron 30.0%
GTGCATATACATGTTTAGAT+TGG + chr8_4:14985583-14985602 None:intergenic 30.0%
CTAAACATGTATATGCACTT+AGG - chr8_4:14985585-14985604 Msa1315510:CDS 30.0%
!!! AATGGTTTTTTTTCCTGCTT+AGG - chr8_4:14985722-14985741 Msa1315510:intron 30.0%
GACACAATCTTAGTATATAC+AGG + chr8_4:14985811-14985830 None:intergenic 30.0%
CATATTAGACAAGATGTGAA+GGG - chr8_4:14985897-14985916 Msa1315510:CDS 30.0%
CATGTTTGTATGCAAATGTT+TGG - chr8_4:14985943-14985962 Msa1315510:CDS 30.0%
! TTCAAAATTTTGTCCTGACT+TGG - chr8_4:14985987-14986006 Msa1315510:intron 30.0%
!! ATATTCTACTCAAAGTACTG+TGG + chr8_4:14986047-14986066 None:intergenic 30.0%
TTCATATCTTCTGCAGTATT+TGG - chr8_4:14986217-14986236 Msa1315510:intron 30.0%
!!! TGGTTTTTTTATTATCGGGA+TGG - chr8_4:14986237-14986256 Msa1315510:intron 30.0%
ATGCTATAAAGCTTCTGATA+GGG - chr8_4:14986281-14986300 Msa1315510:intron 30.0%
TGACAAATTAAACTGTTACG+TGG - chr8_4:14986402-14986421 Msa1315510:intron 30.0%
CAGTGTAGAAGTTCAAAAAA+TGG - chr8_4:14986652-14986671 Msa1315510:intron 30.0%
!! AATATACAGCTAGAAGTATC+TGG - chr8_4:14986693-14986712 Msa1315510:intron 30.0%
GTATGAATGTGAATCTAACA+CGG - chr8_4:14986715-14986734 Msa1315510:intron 30.0%
AATGTTGTGCTTCTATCTTT+CGG - chr8_4:14986750-14986769 Msa1315510:CDS 30.0%
ATTGTAAGAAACAAACCTCT+CGG + chr8_4:14986967-14986986 None:intergenic 30.0%
!!! AATCTTAGTGGTTTTGTCTA+TGG - chr8_4:14987177-14987196 Msa1315510:intron 30.0%
CGAGTACAACATTGTAAAAA+TGG + chr8_4:14987287-14987306 None:intergenic 30.0%
! TCTTTTGTTACCGATGATTT+TGG - chr8_4:14987323-14987342 Msa1315510:intron 30.0%
ACAACTTAGACCAAAATCAT+CGG + chr8_4:14987336-14987355 None:intergenic 30.0%
TAATTAGTGTTGTCACATAG+AGG - chr8_4:14987362-14987381 Msa1315510:intron 30.0%
TTGTACTAAATAGTGTATGG+CGG + chr8_4:14987444-14987463 None:intergenic 30.0%
ACACTATTTAGTACAAAGTG+TGG - chr8_4:14987448-14987467 Msa1315510:intron 30.0%
GCACTGCAAATATAAATGAA+AGG + chr8_4:14987620-14987639 None:intergenic 30.0%
TGGAAATATGAACAGTTTCA+TGG + chr8_4:14987783-14987802 None:intergenic 30.0%
ACTGTTCATATTTCCATATC+AGG - chr8_4:14987787-14987806 Msa1315510:CDS 30.0%
CTGTTCATATTTCCATATCA+GGG - chr8_4:14987788-14987807 Msa1315510:CDS 30.0%
AAAATGTCATTGGCATTACA+AGG + chr8_4:14987869-14987888 None:intergenic 30.0%
ATCTGTCAAGAAAATGTCAT+TGG + chr8_4:14987879-14987898 None:intergenic 30.0%
! AATGACATTTTCTTGACAGA+TGG - chr8_4:14987878-14987897 Msa1315510:intron 30.0%
TGAGTAATTGCATCATCATA+TGG + chr8_4:14988037-14988056 None:intergenic 30.0%
TAAAAGAAAACTTTACCAGC+TGG + chr8_4:14988139-14988158 None:intergenic 30.0%
TTCCAAATTATGCTATGCTT+TGG + chr8_4:14988266-14988285 None:intergenic 30.0%
! CTGATTTGTATTCTTGAAGA+TGG + chr8_4:14988425-14988444 None:intergenic 30.0%
AAAAAATGGTCTATGGTCTA+TGG - chr8_4:14988445-14988464 Msa1315510:intron 30.0%
GACAAATATGCATGTATCAT+TGG - chr8_4:14988488-14988507 Msa1315510:intron 30.0%
!! TGAAAATCTTAGGCTTTGTT+TGG - chr8_4:14988531-14988550 Msa1315510:intron 30.0%
!! GAAAATCTTAGGCTTTGTTT+GGG - chr8_4:14988532-14988551 Msa1315510:intron 30.0%
TGGAAGAAATAGAAGACATT+GGG - chr8_4:14988605-14988624 Msa1315510:intron 30.0%
TAAAAAATCCTCCTCATTTG+GGG - chr8_4:14988664-14988683 Msa1315510:intron 30.0%
GGGAACTCAAAAATTGTATT+GGG - chr8_4:14988685-14988704 Msa1315510:intron 30.0%
GGAACTCAAAAATTGTATTG+GGG - chr8_4:14988686-14988705 Msa1315510:intron 30.0%
GAACTCAAAAATTGTATTGG+GGG - chr8_4:14988687-14988706 Msa1315510:intron 30.0%
! GGAGCTATGCTTTTATATTA+TGG - chr8_4:14988939-14988958 Msa1315510:CDS 30.0%
! TGCTTTTATATTATGGGGAT+TGG - chr8_4:14988946-14988965 Msa1315510:CDS 30.0%
! TTTATATTATGGGGATTGGT+TGG - chr8_4:14988950-14988969 Msa1315510:CDS 30.0%
GTTGCTTCATCAAGATAATA+TGG + chr8_4:14989012-14989031 None:intergenic 30.0%
TATTATCTTGATGAAGCAAC+TGG - chr8_4:14989012-14989031 Msa1315510:intron 30.0%
! GTAGAATTTTGCAAGAAAGA+AGG - chr8_4:14989283-14989302 Msa1315510:intron 30.0%
! ATTTTGCAAGAAAGAAGGTT+TGG - chr8_4:14989288-14989307 Msa1315510:intron 30.0%
CAAATTCTGATACACTATAG+CGG + chr8_4:14989452-14989471 None:intergenic 30.0%
TAGAGAATTGCCGAAAATAA+TGG + chr8_4:14989563-14989582 None:intergenic 30.0%
AAAGAGTGAAATTTCTTCTC+AGG + chr8_4:14989691-14989710 None:intergenic 30.0%
GAAATTTCACTCTTTCAAGA+AGG - chr8_4:14989696-14989715 Msa1315510:CDS 30.0%
TGATTGAAAATGTCTCTGTT+TGG - chr8_4:14989861-14989880 Msa1315510:intron 30.0%
GAGGGAACAAATTTATAAAG+TGG - chr8_4:14989954-14989973 Msa1315510:intron 30.0%
AATCTTTGTTCTAACATCAC+TGG - chr8_4:14989985-14990004 Msa1315510:intron 30.0%
AACACTAACCTCAATTAAGA+TGG - chr8_4:14990110-14990129 Msa1315510:intron 30.0%
TAACCTCAATTAAGATGGTT+TGG - chr8_4:14990115-14990134 Msa1315510:intron 30.0%
TACTTTACTGTTTATGGTTG+TGG + chr8_4:14990349-14990368 None:intergenic 30.0%
TTGTAGATAAAATGAGAGGA+TGG + chr8_4:14990718-14990737 None:intergenic 30.0%
! AGTGATTTTCTTAAAATGCG+TGG - chr8_4:14990966-14990985 Msa1315510:intron 30.0%
!!! TGCGTGGATTATTTTGATTT+TGG - chr8_4:14990982-14991001 Msa1315510:intron 30.0%
GATTGAAAATGCAACTTAGT+AGG + chr8_4:14991010-14991029 None:intergenic 30.0%
AGAGTTCCATCAAAAATTCA+TGG - chr8_4:14991157-14991176 Msa1315510:intron 30.0%
! ACTCATCCATGAATTTTTGA+TGG + chr8_4:14991166-14991185 None:intergenic 30.0%
TTTCCCCCTATAAATTTAAG+GGG - chr8_4:14991215-14991234 Msa1315510:CDS 30.0%
!!! ACCGTTCACTTGTTTTTGTT+CGG - chr8_4:14984563-14984582 Msa1315510:three_prime_UTR 35.0%
TCCGAACAAAAACAAGTGAA+CGG + chr8_4:14984567-14984586 None:intergenic 35.0%
ATTGAAGACAAAGAACGAAG+GGG + chr8_4:14984619-14984638 None:intergenic 35.0%
CATTGAAGACAAAGAACGAA+GGG + chr8_4:14984620-14984639 None:intergenic 35.0%
TGCTCAAAATATTAACCCTC+AGG - chr8_4:14984666-14984685 Msa1315510:exon 35.0%
GATGCTTCTGTGATTACATA+AGG - chr8_4:14984829-14984848 Msa1315510:intron 35.0%
! CTGTGATTACATAAGGGTTT+TGG - chr8_4:14984836-14984855 Msa1315510:intron 35.0%
! ATTGGGGTTTTTGATCATGA+TGG - chr8_4:14985062-14985081 Msa1315510:intron 35.0%
ATTATAATGATGTGCGACTG+AGG - chr8_4:14985265-14985284 Msa1315510:CDS 35.0%
CGCACAAAAACAAAGCAAAA+AGG + chr8_4:14985389-14985408 None:intergenic 35.0%
!!! TTTGTTTTTGTGCGTTACCA+TGG - chr8_4:14985395-14985414 Msa1315510:CDS 35.0%
!!! TTGTTTTTGTGCGTTACCAT+GGG - chr8_4:14985396-14985415 Msa1315510:CDS 35.0%
AAAACTATTCACTGATCCCA+TGG + chr8_4:14985415-14985434 None:intergenic 35.0%
! TGGGATCAGTGAATAGTTTT+TGG - chr8_4:14985415-14985434 Msa1315510:intron 35.0%
! GCTTAGTGTATGTTTGAGTT+CGG - chr8_4:14985479-14985498 Msa1315510:intron 35.0%
CAATGAGTTCAGCAAAATCA+CGG + chr8_4:14985559-14985578 None:intergenic 35.0%
CCTTCACATCTTGTCTAATA+TGG + chr8_4:14985899-14985918 None:intergenic 35.0%
CCATATTAGACAAGATGTGA+AGG - chr8_4:14985896-14985915 Msa1315510:CDS 35.0%
TGCATACAAACATGTCATTG+CGG + chr8_4:14985937-14985956 None:intergenic 35.0%
!!! TTGAATCAGTGTTTTGATGG+CGG + chr8_4:14985972-14985991 None:intergenic 35.0%
TTTATGAAATGTGCCAAGTC+AGG + chr8_4:14986003-14986022 None:intergenic 35.0%
TTGCAAGTTCTGCAACATTA+AGG + chr8_4:14986137-14986156 None:intergenic 35.0%
! TTATCGGGATGGCTTTTAAA+AGG - chr8_4:14986248-14986267 Msa1315510:intron 35.0%
! GAAGCTTTATAGCATCATCA+TGG + chr8_4:14986276-14986295 None:intergenic 35.0%
GATGCTATAAAGCTTCTGAT+AGG - chr8_4:14986280-14986299 Msa1315510:intron 35.0%
!!! TAGTAGGCAGCCTTATTTTA+TGG - chr8_4:14986336-14986355 Msa1315510:intron 35.0%
TGGATCGTGTCCATAAAATA+AGG + chr8_4:14986349-14986368 None:intergenic 35.0%
TTTGTCACGATATATCCTAG+AGG + chr8_4:14986389-14986408 None:intergenic 35.0%
CTGAATAAAATCTATGCAGC+AGG + chr8_4:14986807-14986826 None:intergenic 35.0%
ATTGGAAATCCTCAATCTCT+AGG - chr8_4:14986920-14986939 Msa1315510:intron 35.0%
ACCTCTCGGAAAAAAGTAAT+TGG + chr8_4:14986953-14986972 None:intergenic 35.0%
! TTTTACAATCTCATCTCTGC+AGG - chr8_4:14987033-14987052 Msa1315510:intron 35.0%
TTTGGACAAAAGTGAAACAC+AGG - chr8_4:14987084-14987103 Msa1315510:intron 35.0%
TTGGACAAAAGTGAAACACA+GGG - chr8_4:14987085-14987104 Msa1315510:intron 35.0%
! TAGTGGATCAGTAATCTTAG+TGG - chr8_4:14987165-14987184 Msa1315510:intron 35.0%
! CTAATATTTTCCGTGATCCA+TGG - chr8_4:14987527-14987546 Msa1315510:intron 35.0%
AAAACCAATGTTGTCAACCA+TGG + chr8_4:14987547-14987566 None:intergenic 35.0%
CAATACCTGACTATGACTAT+AGG + chr8_4:14987702-14987721 None:intergenic 35.0%
!! AGTCATAGTCAGGTATTGAT+TGG - chr8_4:14987704-14987723 Msa1315510:intron 35.0%
!! GTCATAGTCAGGTATTGATT+GGG - chr8_4:14987705-14987724 Msa1315510:intron 35.0%
ATTACCCCTTTACTATTCAC+TGG - chr8_4:14987752-14987771 Msa1315510:CDS 35.0%
TTACCCCTTTACTATTCACT+GGG - chr8_4:14987753-14987772 Msa1315510:CDS 35.0%
! ATTTCCATATCAGGGTATTC+AGG - chr8_4:14987796-14987815 Msa1315510:CDS 35.0%
! TTTCCATATCAGGGTATTCA+GGG - chr8_4:14987797-14987816 Msa1315510:CDS 35.0%
CAAATTGGAAACATACTGCT+GGG + chr8_4:14987910-14987929 None:intergenic 35.0%
CTCATTAGATCAGAAAAGGA+TGG - chr8_4:14988053-14988072 Msa1315510:intron 35.0%
TAATTGAGGCTGAATAGAGA+GGG + chr8_4:14988103-14988122 None:intergenic 35.0%
TTAGCAGTGTTGTCAAATGA+TGG - chr8_4:14988221-14988240 Msa1315510:intron 35.0%
TTGTCAAATGATGGCTATAG+TGG - chr8_4:14988230-14988249 Msa1315510:intron 35.0%
TGCCAAAGCATAGCATAATT+TGG - chr8_4:14988261-14988280 Msa1315510:intron 35.0%
GTGGAAGAAATAGAAGACAT+TGG - chr8_4:14988604-14988623 Msa1315510:intron 35.0%
AAGAAATAGAAGACATTGGG+AGG - chr8_4:14988608-14988627 Msa1315510:intron 35.0%
AAAAAATCCTCCTCATTTGG+GGG - chr8_4:14988665-14988684 Msa1315510:intron 35.0%
GGGGAACTCAAAAATTGTAT+TGG - chr8_4:14988684-14988703 Msa1315510:intron 35.0%
TCAAAAATTGTATTGGGGGA+GGG - chr8_4:14988691-14988710 Msa1315510:intron 35.0%
! TAAAAGCATAGCTCCAACTA+AGG + chr8_4:14988934-14988953 None:intergenic 35.0%
! CAATGGAGTGTTAATATAGG+AGG - chr8_4:14989159-14989178 Msa1315510:intron 35.0%
TTCTTGCTGAGGAAAATCAA+CGG - chr8_4:14989254-14989273 Msa1315510:intron 35.0%
!!! GAAAGAAGGTTTGGTTCTTT+TGG - chr8_4:14989297-14989316 Msa1315510:intron 35.0%
! CTGCACGAAATTCATTTTGT+AGG - chr8_4:14989642-14989661 Msa1315510:intron 35.0%
! CAGGAACATAAACGTTTTCT+TGG + chr8_4:14989672-14989691 None:intergenic 35.0%
!! ACTCTTTCAAGAAGGTATCT+CGG - chr8_4:14989704-14989723 Msa1315510:CDS 35.0%
!! TCATTATACCGACTTACCTT+TGG + chr8_4:14989782-14989801 None:intergenic 35.0%
! AGAGACATTTTCAATCAGTG+TGG + chr8_4:14989858-14989877 None:intergenic 35.0%
! AAATTTGTTCCCTCACATCT+GGG + chr8_4:14989948-14989967 None:intergenic 35.0%
! TAAATTTGTTCCCTCACATC+TGG + chr8_4:14989949-14989968 None:intergenic 35.0%
GTTCCAAACCATCTTAATTG+AGG + chr8_4:14990121-14990140 None:intergenic 35.0%
TTGTCATTGAGTGAATACCA+TGG - chr8_4:14990202-14990221 Msa1315510:intron 35.0%
ATTTACTCATTGTTGGGATG+AGG + chr8_4:14990388-14990407 None:intergenic 35.0%
AAGTAAGCGTTTGCAATAGA+AGG + chr8_4:14990585-14990604 None:intergenic 35.0%
! TTTTTGTCTTTCAAGGTTCC+CGG - chr8_4:14991065-14991084 Msa1315510:intron 35.0%
CCTATCTTCTTGAGGTAATA+TGG + chr8_4:14991111-14991130 None:intergenic 35.0%
CCATATTACCTCAAGAAGAT+AGG - chr8_4:14991108-14991127 Msa1315510:intron 35.0%
ACACCCCTTAAATTTATAGG+GGG + chr8_4:14991221-14991240 None:intergenic 35.0%
CACACCCCTTAAATTTATAG+GGG + chr8_4:14991222-14991241 None:intergenic 35.0%
GCACACCCCTTAAATTTATA+GGG + chr8_4:14991223-14991242 None:intergenic 35.0%
!!! GTTTTGTGCTTTGAGAAACT+AGG - chr8_4:14991269-14991288 Msa1315510:CDS 35.0%
GTTACATGCTGAAAGAAACT+AGG - chr8_4:14991349-14991368 Msa1315510:exon 35.0%
GCGAAGTTGAAAAGTAACGT+GGG + chr8_4:14984450-14984469 None:intergenic 40.0%
TGCGAAGTTGAAAAGTAACG+TGG + chr8_4:14984451-14984470 None:intergenic 40.0%
CCATTGAAGACAAAGAACGA+AGG + chr8_4:14984621-14984640 None:intergenic 40.0%
CCTTCGTTCTTTGTCTTCAA+TGG - chr8_4:14984618-14984637 Msa1315510:three_prime_UTR 40.0%
! TTTTGAGCAGTAACAGGGAA+AGG + chr8_4:14984655-14984674 None:intergenic 40.0%
ATTGATGTGGCTGTTGATCA+AGG - chr8_4:14984916-14984935 Msa1315510:intron 40.0%
TTGATGTGGCTGTTGATCAA+GGG - chr8_4:14984917-14984936 Msa1315510:intron 40.0%
TGCAAAATTGATGTGTGGTG+TGG - chr8_4:14985169-14985188 Msa1315510:intron 40.0%
TGGTGTGGTTGTTGATCAAA+GGG - chr8_4:14985184-14985203 Msa1315510:intron 40.0%
! GTTTGAGTTCGGTGAAATCA+CGG - chr8_4:14985490-14985509 Msa1315510:intron 40.0%
! CAGTGACATGTCTGAAACAA+TGG - chr8_4:14985704-14985723 Msa1315510:intron 40.0%
TGACATTTCAGAACCTAAGC+AGG + chr8_4:14985738-14985757 None:intergenic 40.0%
AAATGTCAGTATGCTGTTCG+AGG - chr8_4:14985750-14985769 Msa1315510:intron 40.0%
AGAGATTGTTACACTTGCTC+AGG - chr8_4:14985773-14985792 Msa1315510:intron 40.0%
!! GTTTTGTTAAATTGCGGCCT+TGG - chr8_4:14985845-14985864 Msa1315510:CDS 40.0%
AAACGAATGAGCATCTGGAT+TGG + chr8_4:14986173-14986192 None:intergenic 40.0%
TCATCAAACGAATGAGCATC+TGG + chr8_4:14986178-14986197 None:intergenic 40.0%
AGATGCTCATTCGTTTGATG+AGG - chr8_4:14986177-14986196 Msa1315510:CDS 40.0%
TTCTGATAGGGTCATCAGAA+GGG - chr8_4:14986293-14986312 Msa1315510:intron 40.0%
ATGCAGCAGGTTCATTACAT+TGG + chr8_4:14986794-14986813 None:intergenic 40.0%
GGAAAAAAGTAATTGGCTGC+TGG + chr8_4:14986946-14986965 None:intergenic 40.0%
!!! GCCAATTACTTTTTTCCGAG+AGG - chr8_4:14986949-14986968 Msa1315510:intron 40.0%
! ATGTGACTATCCTGCTCTTT+TGG - chr8_4:14987066-14987085 Msa1315510:intron 40.0%
!! TCACTTTTGTCCAAAAGAGC+AGG + chr8_4:14987079-14987098 None:intergenic 40.0%
TTGTCACATAGAGGCTATAG+CGG - chr8_4:14987371-14987390 Msa1315510:intron 40.0%
! AATAGTGTATGGCGGAACAA+TGG + chr8_4:14987436-14987455 None:intergenic 40.0%
TCTATAACACTGCAGCGTTA+TGG - chr8_4:14987492-14987511 Msa1315510:intron 40.0%
ATGTTGTCAACCATGGATCA+CGG + chr8_4:14987540-14987559 None:intergenic 40.0%
TGATCCATGGTTGACAACAT+TGG - chr8_4:14987540-14987559 Msa1315510:intron 40.0%
AATGAAAGGTCAACCACACT+AGG + chr8_4:14987606-14987625 None:intergenic 40.0%
CTGATTCAATAGAGAGAGCT+TGG - chr8_4:14987639-14987658 Msa1315510:intron 40.0%
AAACCCTGAATACCCTGATA+TGG + chr8_4:14987803-14987822 None:intergenic 40.0%
GCAAATTGGAAACATACTGC+TGG + chr8_4:14987911-14987930 None:intergenic 40.0%
GTAATTGAGGCTGAATAGAG+AGG + chr8_4:14988104-14988123 None:intergenic 40.0%
ATCCGCAATTGACAAGTAGT+AGG - chr8_4:14988392-14988411 Msa1315510:intron 40.0%
AGCCTACTACTTGTCAATTG+CGG + chr8_4:14988397-14988416 None:intergenic 40.0%
!! TTAGGCTTTGTTTGGGAGTT+TGG - chr8_4:14988539-14988558 Msa1315510:intron 40.0%
!!! GAGGGTTTTGGAAAAAAGGA+AGG - chr8_4:14988576-14988595 Msa1315510:intron 40.0%
!!! TTTTTGAGTTCCCCCAAATG+AGG + chr8_4:14988678-14988697 None:intergenic 40.0%
CTCAAAAATTGTATTGGGGG+AGG - chr8_4:14988690-14988709 Msa1315510:intron 40.0%
!! TAAGGCTTTGTTTGGGAGTT+TGG + chr8_4:14988916-14988935 None:intergenic 40.0%
!! CTCCAACTAAGGCTTTGTTT+GGG + chr8_4:14988923-14988942 None:intergenic 40.0%
ATCTTGATGAAGCAACTGGT+TGG - chr8_4:14989016-14989035 Msa1315510:intron 40.0%
TCTTGATGAAGCAACTGGTT+GGG - chr8_4:14989017-14989036 Msa1315510:intron 40.0%
ATCTGAACTCAAGAAGCAGT+TGG - chr8_4:14989050-14989069 Msa1315510:intron 40.0%
GCTTTAGCTGTTATAAACCC+CGG - chr8_4:14989105-14989124 Msa1315510:intron 40.0%
AGGTGAGCTGCAAATTACAA+TGG - chr8_4:14989142-14989161 Msa1315510:intron 40.0%
GGAATTACTGTCATGTCTGT+AGG - chr8_4:14989231-14989250 Msa1315510:intron 40.0%
TCTTGCTGAGGAAAATCAAC+GGG - chr8_4:14989255-14989274 Msa1315510:intron 40.0%
!!! TTTGGTTCTTTTGGCTGATG+AGG - chr8_4:14989306-14989325 Msa1315510:intron 40.0%
ATTCTGATACACTATAGCGG+CGG + chr8_4:14989449-14989468 None:intergenic 40.0%
! AACAATAGTGCCGCTATTTG+AGG + chr8_4:14989520-14989539 None:intergenic 40.0%
AAGAATGCTATTGTGCCACA+TGG + chr8_4:14989617-14989636 None:intergenic 40.0%
! AAATGTCTCTGTTTGGCTTC+AGG - chr8_4:14989868-14989887 Msa1315510:intron 40.0%
! AATTTGTTCCCTCACATCTG+GGG + chr8_4:14989947-14989966 None:intergenic 40.0%
TTTGATCATGAGTCCTCCTA+AGG - chr8_4:14990023-14990042 Msa1315510:intron 40.0%
TGAATACCATGGATCTTTGC+AGG - chr8_4:14990213-14990232 Msa1315510:intron 40.0%
! CGAGTCTTATGAGTCATTCA+TGG - chr8_4:14990243-14990262 Msa1315510:intron 40.0%
GAGCAATGTATCTGTTTCCT+CGG - chr8_4:14990501-14990520 Msa1315510:intron 40.0%
AAACGCTTACTTAATGCCAC+TGG - chr8_4:14990593-14990612 Msa1315510:intron 40.0%
AGGAACAACAACAATTCCAG+TGG + chr8_4:14990612-14990631 None:intergenic 40.0%
! ACTGGAATTGTTGTTGTTCC+TGG - chr8_4:14990611-14990630 Msa1315510:intron 40.0%
! ATTGTTGTTGTTCCTGGTTC+TGG - chr8_4:14990617-14990636 Msa1315510:intron 40.0%
ACCTCAAGAAGATAGGATTC+CGG - chr8_4:14991115-14991134 Msa1315510:intron 40.0%
TTTGATGGAACTCTGTCAAG+CGG + chr8_4:14991151-14991170 None:intergenic 40.0%
TAGGGGGAAAAAACTCAATG+AGG + chr8_4:14991205-14991224 None:intergenic 40.0%
GGCACACCCCTTAAATTTAT+AGG + chr8_4:14991224-14991243 None:intergenic 40.0%
GAGAAGGATGGTGATACTGT+TGG + chr8_4:14984597-14984616 None:intergenic 45.0%
GTGGTGTGGTTGTTGATCAA+AGG - chr8_4:14985183-14985202 Msa1315510:intron 45.0%
TCTGTTTGGTTGTGTGACTG+AGG - chr8_4:14985320-14985339 Msa1315510:CDS 45.0%
ATGTCATTGCGGTCTATAGC+AGG + chr8_4:14985926-14985945 None:intergenic 45.0%
CTTCTGATAGGGTCATCAGA+AGG - chr8_4:14986292-14986311 Msa1315510:intron 45.0%
ACTCTGTGTGTGCTCATAGT+AGG - chr8_4:14986320-14986339 Msa1315510:intron 45.0%
! GTGAAACACAGGGTTTGTTC+AGG - chr8_4:14987095-14987114 Msa1315510:intron 45.0%
AGAGAGAGCTTGGCAAATTG+TGG - chr8_4:14987649-14987668 Msa1315510:intron 45.0%
CAAATTGTGGATCAGATCCC+TGG - chr8_4:14987662-14987681 Msa1315510:intron 45.0%
TGGTGCCTATAGTCATAGTC+AGG - chr8_4:14987694-14987713 Msa1315510:intron 45.0%
ACCGCCCAGTGAATAGTAAA+GGG + chr8_4:14987760-14987779 None:intergenic 45.0%
!! CTGAATAGAGAGGGTACTGA+GGG + chr8_4:14988094-14988113 None:intergenic 45.0%
AGTGCTATAGTTCCGCAGTT+TGG - chr8_4:14988305-14988324 Msa1315510:intron 45.0%
CTACACTCAGTACCAAACTG+CGG + chr8_4:14988320-14988339 None:intergenic 45.0%
AAACTGCTGCTATAGCGTAG+CGG - chr8_4:14988342-14988361 Msa1315510:intron 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG - chr8_4:14988543-14988562 Msa1315510:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG - chr8_4:14988544-14988563 Msa1315510:intron 45.0%
!!! AGGGGAGGGTTTTGGAAAAA+AGG - chr8_4:14988572-14988591 Msa1315510:intron 45.0%
GGAAAAAAGGAAGGAGCAAG+TGG - chr8_4:14988585-14988604 Msa1315510:intron 45.0%
ATAGAAGACATTGGGAGGAG+AGG - chr8_4:14988613-14988632 Msa1315510:intron 45.0%
TAGAAGACATTGGGAGGAGA+GGG - chr8_4:14988614-14988633 Msa1315510:intron 45.0%
! ATTGTATTGGGGGAGGGTTT+TGG - chr8_4:14988697-14988716 Msa1315510:intron 45.0%
! TTGTATTGGGGGAGGGTTTT+GGG - chr8_4:14988698-14988717 Msa1315510:intron 45.0%
! CTTTGTTTGGGAGTTTGGAG+GGG + chr8_4:14988544-14988563 None:intergenic 45.0%
!! GCTTTGTTTGGGAGTTTGGA+GGG + chr8_4:14988543-14988562 None:intergenic 45.0%
CTCCCAAACAAAGCCTTAGT+TGG - chr8_4:14988918-14988937 Msa1315510:CDS 45.0%
!! GCTCCAACTAAGGCTTTGTT+TGG + chr8_4:14988924-14988943 None:intergenic 45.0%
CTTGATGAAGCAACTGGTTG+GGG - chr8_4:14989018-14989037 Msa1315510:intron 45.0%
TTGATGAAGCAACTGGTTGG+GGG - chr8_4:14989019-14989038 Msa1315510:intron 45.0%
TTGGAAGATGCCAAGTCCAA+GGG - chr8_4:14989069-14989088 Msa1315510:intron 45.0%
ATGTCTGTAGGTTCTTGCTG+AGG - chr8_4:14989243-14989262 Msa1315510:intron 45.0%
AGCGGCACTATTGTTTACAG+CGG - chr8_4:14989525-14989544 Msa1315510:intron 45.0%
!! AAGAAGGTATCTCGGTCCAT+GGG - chr8_4:14989712-14989731 Msa1315510:intron 45.0%
! TCTTTTCAGTCCGTCTCCAA+AGG - chr8_4:14989763-14989782 Msa1315510:intron 45.0%
!! TACCGACTTACCTTTGGAGA+CGG + chr8_4:14989776-14989795 None:intergenic 45.0%
! TGTTTGGCTTCAGGCTATCA+CGG - chr8_4:14989877-14989896 Msa1315510:intron 45.0%
TGGAAAGCGAGGAGGTTATA+TGG - chr8_4:14989906-14989925 Msa1315510:intron 45.0%
AAAGCGAGGAGGTTATATGG+AGG - chr8_4:14989909-14989928 Msa1315510:intron 45.0%
GAGGTTATATGGAGGTGACT+GGG - chr8_4:14989917-14989936 Msa1315510:intron 45.0%
AGAGGCAAAGGGTTAACCTT+AGG + chr8_4:14990042-14990061 None:intergenic 45.0%
! GGAACGCTGAAGTACTAAGA+AGG - chr8_4:14990136-14990155 Msa1315510:intron 45.0%
! ACGCTGAAGTACTAAGAAGG+AGG - chr8_4:14990139-14990158 Msa1315510:intron 45.0%
TACCATGGATCTTTGCAGGT+TGG - chr8_4:14990217-14990236 Msa1315510:intron 45.0%
TGAGTCATTCATGGCTGAGA+AGG - chr8_4:14990252-14990271 Msa1315510:intron 45.0%
GAGTCATTCATGGCTGAGAA+GGG - chr8_4:14990253-14990272 Msa1315510:intron 45.0%
TACTCATTGTTGGGATGAGG+TGG + chr8_4:14990385-14990404 None:intergenic 45.0%
GTAACCTGCAACAAAGCAGA+AGG - chr8_4:14990479-14990498 Msa1315510:intron 45.0%
!! CTTTGATAGCCTTTTCAGGC+AGG + chr8_4:14990532-14990551 None:intergenic 45.0%
!! GCAGCTTTGATAGCCTTTTC+AGG + chr8_4:14990536-14990555 None:intergenic 45.0%
AAAGGCTATCAAAGCTGCAG+AGG - chr8_4:14990538-14990557 Msa1315510:intron 45.0%
!! CGTTTGCAATAGAAGGCATC+AGG + chr8_4:14990578-14990597 None:intergenic 45.0%
!!! GTTGTTCCTGGTTCTGGTTT+TGG - chr8_4:14990623-14990642 Msa1315510:intron 45.0%
TTGATGGAACTCTGTCAAGC+GGG + chr8_4:14991150-14991169 None:intergenic 45.0%
!! AATTAATTTATCATAATTAT+CGG + chr8_4:14990883-14990902 None:intergenic 5.0%
ACCCATCACACCACACAATG+CGG - chr8_4:14984506-14984525 Msa1315510:three_prime_UTR 50.0%
TCCGCATTGTGTGGTGTGAT+GGG + chr8_4:14984510-14984529 None:intergenic 50.0%
TTCCGCATTGTGTGGTGTGA+TGG + chr8_4:14984511-14984530 None:intergenic 50.0%
AATCCGCTGCAGACAGATTC+AGG - chr8_4:14984530-14984549 Msa1315510:three_prime_UTR 50.0%
ATGCCTGAATCTGTCTGCAG+CGG + chr8_4:14984536-14984555 None:intergenic 50.0%
AAGAACGAAGGGGAGAAGGA+TGG + chr8_4:14984609-14984628 None:intergenic 50.0%
GACAAAGAACGAAGGGGAGA+AGG + chr8_4:14984613-14984632 None:intergenic 50.0%
TTGGTTGTGTGACTGAGGAC+TGG - chr8_4:14985325-14985344 Msa1315510:CDS 50.0%
AAATTGCGGCCTTGGCAGAA+TGG - chr8_4:14985853-14985872 Msa1315510:CDS 50.0%
GATAGGGTCATCAGAAGGGT+TGG - chr8_4:14986297-14986316 Msa1315510:intron 50.0%
! GGACACGATCCAAAAGTGTG+AGG - chr8_4:14986357-14986376 Msa1315510:intron 50.0%
AGTGCGTCACCACAAAAACG+AGG - chr8_4:14986472-14986491 Msa1315510:intron 50.0%
GTGCGTCACCACAAAAACGA+GGG - chr8_4:14986473-14986492 Msa1315510:intron 50.0%
!! CAGTCACACCCTCGTTTTTG+TGG + chr8_4:14986484-14986503 None:intergenic 50.0%
! TAGAGGCTATAGCGGTGCTA+CGG - chr8_4:14987379-14987398 Msa1315510:intron 50.0%
CCGCCCAGTGAATAGTAAAG+GGG + chr8_4:14987759-14987778 None:intergenic 50.0%
CCCCTTTACTATTCACTGGG+CGG - chr8_4:14987756-14987775 Msa1315510:CDS 50.0%
GACCGCCCAGTGAATAGTAA+AGG + chr8_4:14987761-14987780 None:intergenic 50.0%
TTACGTGATGCAATAGCCGC+TGG - chr8_4:14987821-14987840 Msa1315510:CDS 50.0%
TGCAATAGCCGCTGGAATTG+AGG - chr8_4:14987829-14987848 Msa1315510:intron 50.0%
!! TAGAGAGGGTACTGAGGGAT+GGG + chr8_4:14988089-14988108 None:intergenic 50.0%
!! ATAGAGAGGGTACTGAGGGA+TGG + chr8_4:14988090-14988109 None:intergenic 50.0%
!! GCTGAATAGAGAGGGTACTG+AGG + chr8_4:14988095-14988114 None:intergenic 50.0%
TCAGCCTCAATTACCCTCCA+TGG - chr8_4:14988110-14988129 Msa1315510:intron 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG - chr8_4:14988542-14988561 Msa1315510:intron 50.0%
! ACATTGGGAGGAGAGGGTTT+TGG - chr8_4:14988620-14988639 Msa1315510:intron 50.0%
TTGAGTTCCCCCAAATGAGG+AGG + chr8_4:14988675-14988694 None:intergenic 50.0%
! TGTATTGGGGGAGGGTTTTG+GGG - chr8_4:14988699-14988718 Msa1315510:intron 50.0%
!! GGCTTTGTTTGGGAGTTTGG+AGG + chr8_4:14988542-14988561 None:intergenic 50.0%
GTTGGAAGATGCCAAGTCCA+AGG - chr8_4:14989068-14989087 Msa1315510:intron 50.0%
AACACTGATGCCCTTGGACT+TGG + chr8_4:14989082-14989101 None:intergenic 50.0%
!! AGTCCAAGGGCATCAGTGTT+AGG - chr8_4:14989082-14989101 Msa1315510:intron 50.0%
!! GTCCAAGGGCATCAGTGTTA+GGG - chr8_4:14989083-14989102 Msa1315510:intron 50.0%
ATAAACCCCGGCAATCCAAC+AGG - chr8_4:14989117-14989136 Msa1315510:intron 50.0%
TAAACCCCGGCAATCCAACA+GGG - chr8_4:14989118-14989137 Msa1315510:intron 50.0%
!! CAAGAAGGTATCTCGGTCCA+TGG - chr8_4:14989711-14989730 Msa1315510:intron 50.0%
GTATCTCGGTCCATGGGATA+CGG - chr8_4:14989718-14989737 Msa1315510:intron 50.0%
ATCATTGTCGCCGTATCCCA+TGG + chr8_4:14989731-14989750 None:intergenic 50.0%
GTCCGTCTCCAAAGGTAAGT+CGG - chr8_4:14989771-14989790 Msa1315510:intron 50.0%
! GTTTGGCTTCAGGCTATCAC+GGG - chr8_4:14989878-14989897 Msa1315510:intron 50.0%
! TTTGGCTTCAGGCTATCACG+GGG - chr8_4:14989879-14989898 Msa1315510:intron 50.0%
GGAGGTTATATGGAGGTGAC+TGG - chr8_4:14989916-14989935 Msa1315510:intron 50.0%
! TGGGTTTTCCCCAGATGTGA+GGG - chr8_4:14989936-14989955 Msa1315510:intron 50.0%
GGCAAAGGGTTAACCTTAGG+AGG + chr8_4:14990039-14990058 None:intergenic 50.0%
CTCCAACCTGCAAAGATCCA+TGG + chr8_4:14990222-14990241 None:intergenic 50.0%
AACCTTTGCACGCGTAGCAA+GGG + chr8_4:14990293-14990312 None:intergenic 50.0%
TAACCTTTGCACGCGTAGCA+AGG + chr8_4:14990294-14990313 None:intergenic 50.0%
! TGCTCCTTCTGCTTTGTTGC+AGG + chr8_4:14990486-14990505 None:intergenic 50.0%
!! GCAATAGAAGGCATCAGGTG+CGG + chr8_4:14990573-14990592 None:intergenic 50.0%
!!! TCCTGGTTCTGGTTTTGGAC+AGG - chr8_4:14990628-14990647 Msa1315510:intron 50.0%
ACCTGTCCAAAACCAGAACC+AGG + chr8_4:14990632-14990651 None:intergenic 50.0%
! TTCCCGGCACATGGCATTTT+AGG - chr8_4:14991081-14991100 Msa1315510:intron 50.0%
CACCTAAAATGCCATGTGCC+GGG + chr8_4:14991086-14991105 None:intergenic 50.0%
GCACCTAAAATGCCATGTGC+CGG + chr8_4:14991087-14991106 None:intergenic 50.0%
GCCGGAATCCTATCTTCTTG+AGG + chr8_4:14991119-14991138 None:intergenic 50.0%
! CAGCGGATTTCCGCATTGTG+TGG + chr8_4:14984519-14984538 None:intergenic 55.0%
TCCACGACACCATTCTGCCA+AGG + chr8_4:14985865-14985884 None:intergenic 55.0%
! AGGTCGCAGCCTCACACTTT+TGG + chr8_4:14986369-14986388 None:intergenic 55.0%
CAGATCCCTGGAAGAGCAAC+TGG - chr8_4:14987674-14987693 Msa1315510:intron 55.0%
AGGCACCAGTTGCTCTTCCA+GGG + chr8_4:14987682-14987701 None:intergenic 55.0%
TAGGCACCAGTTGCTCTTCC+AGG + chr8_4:14987683-14987702 None:intergenic 55.0%
ATCGCGCTCCTCAATTCCAG+CGG + chr8_4:14987840-14987859 None:intergenic 55.0%
GCCTCAATTACCCTCCATGG+TGG - chr8_4:14988113-14988132 Msa1315510:intron 55.0%
GCCACCATGGAGGGTAATTG+AGG + chr8_4:14988117-14988136 None:intergenic 55.0%
ACTTTACCAGCTGGCCACCA+TGG + chr8_4:14988130-14988149 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG - chr8_4:14988547-14988566 Msa1315510:intron 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG - chr8_4:14988548-14988567 Msa1315510:intron 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG - chr8_4:14988549-14988568 Msa1315510:intron 55.0%
!! TTGGGAGGAGAGGGTTTTGG+AGG - chr8_4:14988623-14988642 Msa1315510:intron 55.0%
!! GTATTGGGGGAGGGTTTTGG+GGG - chr8_4:14988700-14988719 Msa1315510:intron 55.0%
!!! TATTGGGGGAGGGTTTTGGG+GGG - chr8_4:14988701-14988720 Msa1315510:intron 55.0%
!!! AGGGTTTTGGGGGGTTATGG+AGG - chr8_4:14988710-14988729 Msa1315510:intron 55.0%
!!! GGGTTTTGGGGGGTTATGGA+GGG - chr8_4:14988711-14988730 Msa1315510:intron 55.0%
TTTGGGAGTTTGGAGGGGAG+GGG + chr8_4:14988549-14988568 None:intergenic 55.0%
GTTTGGGAGTTTGGAGGGGA+GGG + chr8_4:14988548-14988567 None:intergenic 55.0%
TGTTTGGGAGTTTGGAGGGG+AGG + chr8_4:14988547-14988566 None:intergenic 55.0%
AGCCCTAACACTGATGCCCT+TGG + chr8_4:14989088-14989107 None:intergenic 55.0%
! CTGGGTTTTCCCCAGATGTG+AGG - chr8_4:14989935-14989954 Msa1315510:intron 55.0%
TTCCCTTGCTACGCGTGCAA+AGG - chr8_4:14990288-14990307 Msa1315510:intron 55.0%
!! TTTTCAGGCAGGCGAATCCG+AGG + chr8_4:14990521-14990540 None:intergenic 55.0%
TCGGATTCGCCTGCCTGAAA+AGG - chr8_4:14990520-14990539 Msa1315510:intron 55.0%
CTTTCAAGGTTCCCGGCACA+TGG - chr8_4:14991072-14991091 Msa1315510:intron 55.0%
CTCTGTCAAGCGGGTGACAA+TGG + chr8_4:14991141-14991160 None:intergenic 55.0%
! GCCTTGGCAGAATGGTGTCG+TGG - chr8_4:14985861-14985880 Msa1315510:CDS 60.0%
AGTGTGAGGCTGCGACCTCT+AGG - chr8_4:14986371-14986390 Msa1315510:intron 60.0%
! GGCTGCTGGCCTAGAGATTG+AGG + chr8_4:14986932-14986951 None:intergenic 60.0%
GCTACGGCTCTCTAGCACAG+TGG - chr8_4:14987395-14987414 Msa1315510:intron 60.0%
! GCTGGAATTGAGGAGCGCGA+TGG - chr8_4:14987839-14987858 Msa1315510:intron 60.0%
TACCAGCTGGCCACCATGGA+GGG + chr8_4:14988126-14988145 None:intergenic 60.0%
TTACCAGCTGGCCACCATGG+AGG + chr8_4:14988127-14988146 None:intergenic 60.0%
!!! GGGAGGGTTTTGGGGGGTTA+TGG - chr8_4:14988707-14988726 Msa1315510:intron 60.0%
TGAAGCAACTGGTTGGGGGC+TGG - chr8_4:14989023-14989042 Msa1315510:intron 60.0%
ACCTGCCCTGTTGGATTGCC+GGG + chr8_4:14989126-14989145 None:intergenic 60.0%
CACCTGCCCTGTTGGATTGC+CGG + chr8_4:14989127-14989146 None:intergenic 60.0%
TTGCAGCTCACCTGCCCTGT+TGG + chr8_4:14989135-14989154 None:intergenic 60.0%
TCAGGCTATCACGGGGAGTG+TGG - chr8_4:14989886-14989905 Msa1315510:intron 60.0%
GTCAAGCGGGTGACAATGGC+CGG + chr8_4:14991137-14991156 None:intergenic 60.0%
TACCCTCCATGGTGGCCAGC+TGG - chr8_4:14988121-14988140 Msa1315510:intron 65.0%
GGAGTTTGGAGGGGAGGGGA+GGG - chr8_4:14988553-14988572 Msa1315510:intron 65.0%
GAGTTTGGAGGGGAGGGGAG+GGG - chr8_4:14988554-14988573 Msa1315510:intron 65.0%
GAGTTTGGAGGGGAGGGGAG+GGG + chr8_4:14988554-14988573 None:intergenic 65.0%
GGAGTTTGGAGGGGAGGGGA+GGG + chr8_4:14988553-14988572 None:intergenic 65.0%
CCTGCCCTGTTGGATTGCCG+GGG + chr8_4:14989125-14989144 None:intergenic 65.0%
! CACGGGGAGTGTGGAAAGCG+AGG - chr8_4:14989895-14989914 Msa1315510:intron 65.0%
! GGGGAGTGTGGAAAGCGAGG+AGG - chr8_4:14989898-14989917 Msa1315510:intron 65.0%
GGGAGTTTGGAGGGGAGGGG+AGG - chr8_4:14988552-14988571 Msa1315510:intron 70.0%
TTTGGAGGGGAGGGGAGGGG+AGG - chr8_4:14988557-14988576 Msa1315510:intron 70.0%
TTGGAGGGGAGGGGAGGGGA+GGG - chr8_4:14988558-14988577 Msa1315510:intron 70.0%
! GGGAGGGGAGGGGAGGGTTT+TGG - chr8_4:14988564-14988583 Msa1315510:intron 70.0%
!! AGGGGAGGGCTTTGGGGGGT+TGG + chr8_4:14988883-14988902 None:intergenic 70.0%
! AGGGGAGGGGAGGGCTTTGG+GGG + chr8_4:14988888-14988907 None:intergenic 70.0%
GAGGGGAGGGGAGGGCTTTG+GGG + chr8_4:14988889-14988908 None:intergenic 70.0%
GGAGGGGAGGGGAGGGCTTT+GGG + chr8_4:14988890-14988909 None:intergenic 70.0%
TTGGAGGGGAGGGGAGGGGA+GGG + chr8_4:14988558-14988577 None:intergenic 70.0%
TTTGGAGGGGAGGGGAGGGG+AGG + chr8_4:14988557-14988576 None:intergenic 70.0%
GGGAGTTTGGAGGGGAGGGG+AGG + chr8_4:14988552-14988571 None:intergenic 70.0%
CCCCGGCAATCCAACAGGGC+AGG - chr8_4:14989122-14989141 Msa1315510:intron 70.0%
!! GGGGAGGGGAGGGCTTTGGG+GGG + chr8_4:14988887-14988906 None:intergenic 75.0%
GGGAGGGGAGGGGAGGGCTT+TGG + chr8_4:14988891-14988910 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 14984388 14991486 14984388 ID=Msa1315510;Name=Msa1315510
chr8_4 mRNA 14984388 14991486 14984388 ID=Msa1315510-mRNA-1;Parent=Msa1315510;Name=Msa1315510-mRNA-1;_AED=0.08;_eAED=0.08;_QI=135|0.92|1|1|1|1|14|290|507
chr8_4 exon 14984388 14984794 14984388 ID=Msa1315510-mRNA-1:exon:5732;Parent=Msa1315510-mRNA-1
chr8_4 exon 14985225 14985428 14985225 ID=Msa1315510-mRNA-1:exon:5731;Parent=Msa1315510-mRNA-1
chr8_4 exon 14985565 14985639 14985565 ID=Msa1315510-mRNA-1:exon:5730;Parent=Msa1315510-mRNA-1
chr8_4 exon 14985830 14985984 14985830 ID=Msa1315510-mRNA-1:exon:5729;Parent=Msa1315510-mRNA-1
chr8_4 exon 14986090 14986210 14986090 ID=Msa1315510-mRNA-1:exon:5728;Parent=Msa1315510-mRNA-1
chr8_4 exon 14986547 14986621 14986547 ID=Msa1315510-mRNA-1:exon:5727;Parent=Msa1315510-mRNA-1
chr8_4 exon 14986731 14986868 14986731 ID=Msa1315510-mRNA-1:exon:5726;Parent=Msa1315510-mRNA-1
chr8_4 exon 14987732 14987842 14987732 ID=Msa1315510-mRNA-1:exon:5725;Parent=Msa1315510-mRNA-1
chr8_4 exon 14987961 14988065 14987961 ID=Msa1315510-mRNA-1:exon:5724;Parent=Msa1315510-mRNA-1
chr8_4 exon 14988159 14988237 14988159 ID=Msa1315510-mRNA-1:exon:5723;Parent=Msa1315510-mRNA-1
chr8_4 exon 14988758 14988819 14988758 ID=Msa1315510-mRNA-1:exon:5722;Parent=Msa1315510-mRNA-1
chr8_4 exon 14988904 14988969 14988904 ID=Msa1315510-mRNA-1:exon:5721;Parent=Msa1315510-mRNA-1
chr8_4 exon 14989676 14989726 14989676 ID=Msa1315510-mRNA-1:exon:5720;Parent=Msa1315510-mRNA-1
chr8_4 exon 14991187 14991486 14991187 ID=Msa1315510-mRNA-1:exon:5719;Parent=Msa1315510-mRNA-1
chr8_4 five_prime_UTR 14991352 14991486 14991352 ID=Msa1315510-mRNA-1:five_prime_utr;Parent=Msa1315510-mRNA-1
chr8_4 CDS 14991187 14991351 14991187 ID=Msa1315510-mRNA-1:cds;Parent=Msa1315510-mRNA-1
chr8_4 CDS 14989676 14989726 14989676 ID=Msa1315510-mRNA-1:cds;Parent=Msa1315510-mRNA-1
chr8_4 CDS 14988904 14988969 14988904 ID=Msa1315510-mRNA-1:cds;Parent=Msa1315510-mRNA-1
chr8_4 CDS 14988758 14988819 14988758 ID=Msa1315510-mRNA-1:cds;Parent=Msa1315510-mRNA-1
chr8_4 CDS 14988159 14988237 14988159 ID=Msa1315510-mRNA-1:cds;Parent=Msa1315510-mRNA-1
chr8_4 CDS 14987961 14988065 14987961 ID=Msa1315510-mRNA-1:cds;Parent=Msa1315510-mRNA-1
chr8_4 CDS 14987732 14987842 14987732 ID=Msa1315510-mRNA-1:cds;Parent=Msa1315510-mRNA-1
chr8_4 CDS 14986731 14986868 14986731 ID=Msa1315510-mRNA-1:cds;Parent=Msa1315510-mRNA-1
chr8_4 CDS 14986547 14986621 14986547 ID=Msa1315510-mRNA-1:cds;Parent=Msa1315510-mRNA-1
chr8_4 CDS 14986090 14986210 14986090 ID=Msa1315510-mRNA-1:cds;Parent=Msa1315510-mRNA-1
chr8_4 CDS 14985830 14985984 14985830 ID=Msa1315510-mRNA-1:cds;Parent=Msa1315510-mRNA-1
chr8_4 CDS 14985565 14985639 14985565 ID=Msa1315510-mRNA-1:cds;Parent=Msa1315510-mRNA-1
chr8_4 CDS 14985225 14985428 14985225 ID=Msa1315510-mRNA-1:cds;Parent=Msa1315510-mRNA-1
chr8_4 CDS 14984678 14984794 14984678 ID=Msa1315510-mRNA-1:cds;Parent=Msa1315510-mRNA-1
chr8_4 three_prime_UTR 14984388 14984677 14984388 ID=Msa1315510-mRNA-1:three_prime_utr;Parent=Msa1315510-mRNA-1
Gene Sequence

>Msa1315510

ATGCGGAAATCCGCTGCAGACAGATTCAGGCATCTTTTCAACCGTTCACTTGTTTTTGTTCGGAATCAAAACCAACAGTATCACCATCCTTCTCCCCTTCGTTCTTTGTCTTCAATGGCTTCTGATTCACCTTTCCCTGTTACTGCTCAAAATATTAACCCTCAGAACTTGCAAAAAGCTTTGCAAGCCAATCCAGATGCTCATTCGTTTGATGAGATAATTTACTGCAACATTGGAAATCCTCAATCTCTAGGCCAGCAGCCAATTACTTTTTTCCGAGAGGTTCTTGCTTTATGTGACTATCCTGCTCTTTTGGACAAAAGTGAAACACAGGGTTTGTTCAGTGCTGATTCAATAGAGAGAGCTTGGCAAATTGTGGATCAGATCCCTGGAAGAGCAACTGGTGCCTATAGTCATAGTCAGGGTATTCAGGGTTTACGTGATGCAATAGCCGCTGGAATTGAGGAGCGCGATGGTTTTCCTTGTAATGCCAATGACATTTTCTTGACAGATGGTGCAAGCCCAGCAGTCCATATGATGATGCAATTACTCATTAGATCAGAAAAGGATGGTATTTTGTGTCCCATCCCTCAGTACCCTCTCTATTCAGCCTCAATTACCCTCCATGGTGGCCAGCTGGTACCATATTATCTTGATGAAGCAACTGGTTGGGGGCTGGAAATATCTGAACTCAAGAAGCAGTTGGAAGATGCCAAGTCCAAGGGCATCAGTGTTAGGGCTTTAGCTGTTATAAACCCCGGCAATCCAACAGGGCAGGTTCTTGCTGAGGAAAATCAACGGGCTATAGTAGAATTTTGCAAGAAAGAAGGTTTGGTTCTTTTGGCTGATGAGGTTTACCAAGAAAACGTTTATGTTCCTGAGAAGAAATTTCACTCTTTCAAGAAGGTATCTCGGTCCATGGGATACGGCGACAATGATATCTGCTTAGTATCTTTTCAGTCCGTCTCCAAAGGCTATCACGGGGAGTGTGGAAAGCGAGGAGGTTATATGGAGGTGACTGGGTTTTCCCCAGATGTGAGGGAACAAATTTATAAAGTGGCATCTGTGAATCTTTGTTCTAACATCACTGGTCAAATTCTTGCAAGTTTGATCATGAGTCCTCCTAAGGTTGGAGACGAGTCTTATGAGTCATTCATGGCTGAGAAGGGTGCTATTTTATCTTCCCTTGCTACGCGTGCAAAGACACTTGAAGAAGCTTTAAACAAATTAGAGGGCGTAACCTGCAACAAAGCAGAAGGAGCAATGTATCTGTTTCCTCGGATTCGCCTGCCTGAAAAGGCTATCAAAGCTGCAGAGGCTGAAAAGTCCGCACCTGATGCCTTCTATTGCAAACGCTTACTTAATGCCACTGGAATTGTTGTTGTTCCTGGTTCTGGTTTTGGACAGGTTCCCGGCACATGGCATTTTAGGTGCACCATATTACCTCAAGAAGATAGGATTCCGGCCATTGTCACCCGCTTGACAGAGTTCCATCAAAAATTCATGGATGAGTTTCGCGATTGA
Protein sequence

>Msa1315510

MRKSAADRFRHLFNRSLVFVRNQNQQYHHPSPLRSLSSMASDSPFPVTAQNINPQNLQKALQANPDAHSFDEIIYCNIGNPQSLGQQPITFFREVLALCDYPALLDKSETQGLFSADSIERAWQIVDQIPGRATGAYSHSQGIQGLRDAIAAGIEERDGFPCNANDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASITLHGGQLVPYYLDEATGWGLEISELKKQLEDAKSKGISVRALAVINPGNPTGQVLAEENQRAIVEFCKKEGLVLLADEVYQENVYVPEKKFHSFKKVSRSMGYGDNDICLVSFQSVSKGYHGECGKRGGYMEVTGFSPDVREQIYKVASVNLCSNITGQILASLIMSPPKVGDESYESFMAEKGAILSSLATRAKTLEEALNKLEGVTCNKAEGAMYLFPRIRLPEKAIKAAEAEKSAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTILPQEDRIPAIVTRLTEFHQKFMDEFRD*