Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1278500 | sp|Q9MB95|1A11_PRUMU | 70.954 | 482 | 125 | 3 | 10 | 479 | 12 | 490 | 0.0 | 705 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1278500 | A0A072TNM7 | 97.917 | 480 | 10 | 0 | 1 | 480 | 1 | 480 | 0.0 | 986 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1237350 | Msa1278500 | 0.877329 | 6.857706e-69 | -8.615850e-47 |
| Msa1278500 | Msa1317770 | 0.929211 | 9.617834e-93 | -8.615850e-47 |
| Msa1278500 | Msa1335230 | 0.802901 | 4.503114e-49 | -8.615850e-47 |
| Msa1278500 | Msa1423820 | 0.810765 | 9.796854e-51 | -8.615850e-47 |
| Msa1177680 | Msa1278500 | 0.822381 | 2.442316e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1278500 | MtrunA17_Chr8g0348351 | 97.917 | 480 | 10 | 0 | 1 | 480 | 1 | 480 | 0.0 | 986 |
| Msa1278500 | MtrunA17_Chr7g0248681 | 79.132 | 484 | 97 | 3 | 1 | 480 | 1 | 484 | 0.0 | 781 |
| Msa1278500 | MtrunA17_Chr8g0387481 | 65.833 | 480 | 153 | 3 | 9 | 480 | 10 | 486 | 0.0 | 679 |
| Msa1278500 | MtrunA17_Chr6g0488041 | 56.481 | 432 | 186 | 2 | 11 | 441 | 14 | 444 | 0.0 | 528 |
| Msa1278500 | MtrunA17_Chr4g0054371 | 53.089 | 437 | 195 | 2 | 9 | 435 | 2 | 438 | 0.0 | 516 |
| Msa1278500 | MtrunA17_Chr8g0389311 | 55.245 | 429 | 184 | 2 | 11 | 438 | 12 | 433 | 0.0 | 515 |
| Msa1278500 | MtrunA17_Chr8g0389321 | 55.245 | 429 | 184 | 2 | 11 | 438 | 12 | 433 | 0.0 | 515 |
| Msa1278500 | MtrunA17_Chr3g0135251 | 54.225 | 426 | 190 | 2 | 10 | 430 | 1 | 426 | 6.09e-178 | 507 |
| Msa1278500 | MtrunA17_Chr5g0400831 | 53.349 | 433 | 193 | 3 | 9 | 432 | 2 | 434 | 1.47e-177 | 506 |
| Msa1278500 | MtrunA17_Chr6g0475681 | 42.005 | 419 | 242 | 1 | 11 | 428 | 104 | 522 | 1.29e-129 | 386 |
| Msa1278500 | MtrunA17_Chr5g0398431 | 39.853 | 409 | 245 | 1 | 23 | 430 | 84 | 492 | 1.55e-116 | 351 |
| Msa1278500 | MtrunA17_Chr2g0324801 | 22.126 | 348 | 239 | 11 | 94 | 430 | 51 | 377 | 4.92e-13 | 70.5 |
| Msa1278500 | MtrunA17_Chr5g0412871 | 23.729 | 177 | 130 | 4 | 86 | 260 | 100 | 273 | 7.41e-13 | 70.5 |
| Msa1278500 | MtrunA17_Chr8g0345201 | 23.284 | 335 | 232 | 11 | 119 | 430 | 182 | 514 | 1.01e-11 | 67.0 |
| Msa1278500 | MtrunA17_Chr7g0267911 | 20.615 | 325 | 232 | 11 | 114 | 428 | 153 | 461 | 4.10e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1278500 | AT3G61510.1 | 64.588 | 497 | 149 | 5 | 1 | 479 | 1 | 488 | 0.0 | 666 |
| Msa1278500 | AT1G01480.1 | 62.903 | 496 | 160 | 5 | 4 | 479 | 5 | 496 | 0.0 | 646 |
| Msa1278500 | AT4G11280.1 | 63.248 | 468 | 159 | 4 | 6 | 460 | 10 | 477 | 0.0 | 616 |
| Msa1278500 | AT4G37770.1 | 57.512 | 426 | 177 | 1 | 10 | 431 | 3 | 428 | 0.0 | 529 |
| Msa1278500 | AT4G26200.1 | 57.576 | 429 | 179 | 2 | 11 | 436 | 18 | 446 | 0.0 | 524 |
| Msa1278500 | AT4G08040.1 | 53.982 | 452 | 196 | 3 | 10 | 449 | 1 | 452 | 0.0 | 523 |
| Msa1278500 | AT2G22810.1 | 54.734 | 433 | 191 | 2 | 11 | 438 | 4 | 436 | 6.66e-177 | 505 |
| Msa1278500 | AT3G49700.1 | 53.793 | 435 | 193 | 2 | 11 | 439 | 4 | 436 | 7.68e-175 | 499 |
| Msa1278500 | AT5G65800.1 | 54.098 | 427 | 191 | 2 | 9 | 431 | 3 | 428 | 2.61e-174 | 498 |
| Msa1278500 | AT1G01480.2 | 61.929 | 394 | 126 | 5 | 106 | 479 | 1 | 390 | 5.05e-172 | 489 |
| Msa1278500 | AT5G51690.1 | 41.278 | 407 | 238 | 1 | 23 | 428 | 81 | 487 | 2.49e-122 | 367 |
| Msa1278500 | AT1G62960.1 | 39.467 | 413 | 241 | 6 | 19 | 428 | 141 | 547 | 1.22e-107 | 331 |
| Msa1278500 | AT5G51690.2 | 41.643 | 353 | 206 | 0 | 76 | 428 | 12 | 364 | 4.59e-107 | 323 |
| Msa1278500 | AT1G72330.1 | 24.036 | 337 | 231 | 10 | 117 | 430 | 196 | 530 | 1.04e-15 | 80.1 |
| Msa1278500 | AT1G23310.2 | 26.554 | 177 | 125 | 4 | 86 | 260 | 100 | 273 | 2.45e-15 | 78.6 |
| Msa1278500 | AT1G23310.1 | 26.554 | 177 | 125 | 4 | 86 | 260 | 100 | 273 | 3.31e-15 | 78.2 |
| Msa1278500 | AT1G17290.1 | 24.036 | 337 | 231 | 11 | 117 | 430 | 199 | 533 | 4.85e-14 | 74.7 |
| Msa1278500 | AT1G72330.2 | 26.667 | 210 | 146 | 6 | 117 | 319 | 196 | 404 | 7.48e-14 | 73.9 |
| Msa1278500 | AT4G23600.1 | 23.913 | 368 | 232 | 13 | 94 | 442 | 78 | 416 | 1.31e-13 | 73.2 |
| Msa1278500 | AT1G72330.3 | 22.857 | 350 | 232 | 10 | 117 | 430 | 196 | 543 | 1.66e-13 | 73.2 |
| Msa1278500 | AT1G70580.4 | 24.859 | 177 | 128 | 4 | 86 | 260 | 100 | 273 | 1.69e-13 | 72.8 |
| Msa1278500 | AT1G70580.2 | 24.859 | 177 | 128 | 4 | 86 | 260 | 100 | 273 | 1.69e-13 | 72.8 |
| Msa1278500 | AT1G70580.3 | 24.859 | 177 | 128 | 4 | 86 | 260 | 100 | 273 | 1.69e-13 | 72.8 |
| Msa1278500 | AT1G70580.1 | 24.859 | 177 | 128 | 4 | 86 | 260 | 100 | 273 | 1.69e-13 | 72.8 |
| Msa1278500 | AT1G77670.1 | 23.729 | 354 | 234 | 15 | 93 | 439 | 116 | 440 | 2.33e-12 | 69.3 |
| Msa1278500 | AT4G23600.2 | 24.629 | 337 | 212 | 11 | 123 | 442 | 1 | 312 | 4.26e-12 | 67.4 |
| Msa1278500 | AT4G28420.2 | 20.556 | 360 | 244 | 10 | 94 | 437 | 103 | 436 | 2.03e-11 | 66.2 |
| Msa1278500 | AT5G53970.1 | 21.271 | 362 | 241 | 13 | 94 | 438 | 76 | 410 | 2.27e-11 | 65.9 |
Find 112 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGAGGTTGGTTGGTTTA+GGG | 0.190705 | 8_3:+14860253 | Msa1278500:CDS |
| GTTCGAGAAGGTTGTTAAAA+AGG | 0.241887 | 8_3:+14860042 | Msa1278500:CDS |
| GCTCTGAGGTTGGTTGGTTT+AGG | 0.251907 | 8_3:+14860252 | Msa1278500:CDS |
| AGATTTCATCACAAACTAAA+TGG | 0.259841 | 8_3:-14859743 | None:intergenic |
| GTGAAGCTAAGACTTAAATT+TGG | 0.263791 | 8_3:-14860383 | None:intergenic |
| CTTTAGTGTCTCTTTGTCTA+AGG | 0.264938 | 8_3:-14859688 | None:intergenic |
| TTGTCTAAGGTTGTACCTAA+TGG | 0.267027 | 8_3:-14859675 | None:intergenic |
| AACTATATTAAACATGAGTT+TGG | 0.271300 | 8_3:+14857053 | Msa1278500:exon |
| TCTTGTTATCTTGAAGTTGT+TGG | 0.286651 | 8_3:-14859571 | None:intergenic |
| CAAAGGATAAGAGTATTTAT+AGG | 0.307066 | 8_3:+14860320 | Msa1278500:CDS |
| GTGATGAGTGGAGGGGCAAC+AGG | 0.310472 | 8_3:+14857880 | Msa1278500:CDS |
| ACTATATTAAACATGAGTTT+GGG | 0.323778 | 8_3:+14857054 | Msa1278500:exon |
| TTGTTCGAGCCACATGAATA+TGG | 0.328758 | 8_3:+14860474 | Msa1278500:exon |
| CTGAACTTACACACTCCTTC+TGG | 0.332505 | 8_3:-14857615 | None:intergenic |
| GCTTTCCACCCATCAAAATA+TGG | 0.339867 | 8_3:-14857138 | None:intergenic |
| TAAGGTATAAAATATAATTA+AGG | 0.345734 | 8_3:-14857025 | None:intergenic |
| TGTCTAAGGTTGTACCTAAT+GGG | 0.346338 | 8_3:-14859674 | None:intergenic |
| AAAGGATAAGAGTATTTATA+GGG | 0.354733 | 8_3:+14860321 | Msa1278500:CDS |
| GAAGACAACATCAATGTAAA+GGG | 0.357922 | 8_3:+14859627 | Msa1278500:CDS |
| TATAGTTTATCAAAAGACTT+AGG | 0.366855 | 8_3:+14859858 | Msa1278500:CDS |
| GGAAGGAAAATGTCAAGCTT+TGG | 0.368075 | 8_3:+14859939 | Msa1278500:CDS |
| GTTCCTACCCCTTTCTATCC+AGG | 0.392300 | 8_3:+14857955 | Msa1278500:CDS |
| CAGAAGGAGTGTGTAAGTTC+AGG | 0.392726 | 8_3:+14857616 | Msa1278500:CDS |
| TAAGTCTTAGCTTCACTTCA+AGG | 0.396222 | 8_3:+14860390 | Msa1278500:CDS |
| GCTAACTTTCAAGACTATCA+TGG | 0.397089 | 8_3:+14857645 | Msa1278500:CDS |
| CCCCTCCACTCATCACTATA+CGG | 0.403611 | 8_3:-14857873 | None:intergenic |
| TGGAGTGCAAATTGAAGCCT+TGG | 0.407080 | 8_3:-14857595 | None:intergenic |
| TTGAAGAAGAGTTGAAGCTT+TGG | 0.411415 | 8_3:+14860174 | Msa1278500:CDS |
| TTAATTGCTCTGAGGTTGGT+TGG | 0.417602 | 8_3:+14860246 | Msa1278500:CDS |
| GATGGGTCTTGCTGAAAATC+AGG | 0.425500 | 8_3:+14857212 | Msa1278500:CDS |
| AGCTAATTTGTGTGTGAAGT+AGG | 0.432425 | 8_3:+14860682 | Msa1278500:three_prime_UTR |
| ACAAACCCCTCCAACCCATT+AGG | 0.442463 | 8_3:+14859660 | Msa1278500:CDS |
| CCACTCATCACTATACGGTT+TGG | 0.449614 | 8_3:-14857868 | None:intergenic |
| GCTTTGATCTGATTGAAGAA+TGG | 0.457254 | 8_3:+14857559 | Msa1278500:CDS |
| CATGCATACCCTGGATAGAA+AGG | 0.467439 | 8_3:-14857964 | None:intergenic |
| TTGCAATCTTAGACAGAAGT+TGG | 0.469601 | 8_3:-14857089 | None:intergenic |
| TCGATAGTGTTCTAGCTACA+AGG | 0.469720 | 8_3:+14860625 | Msa1278500:three_prime_UTR |
| GCTAATTTGTGTGTGAAGTA+GGG | 0.475551 | 8_3:+14860683 | Msa1278500:three_prime_UTR |
| CTAACTTTCAAGACTATCAT+GGG | 0.476455 | 8_3:+14857646 | Msa1278500:CDS |
| ATAGTTTATCAAAAGACTTA+GGG | 0.480641 | 8_3:+14859859 | Msa1278500:CDS |
| TGCTAATATTGATGATGAAA+CGG | 0.483936 | 8_3:+14860283 | Msa1278500:CDS |
| TCAAAAGACTTAGGGTTCCC+TGG | 0.484527 | 8_3:+14859867 | Msa1278500:CDS |
| AGAAGACAACATCAATGTAA+AGG | 0.484559 | 8_3:+14859626 | Msa1278500:CDS |
| TTCCTACCCCTTTCTATCCA+GGG | 0.485138 | 8_3:+14857956 | Msa1278500:CDS |
| TCACAAATAGCTAGCTAGCT+AGG | 0.487848 | 8_3:-14860574 | None:intergenic |
| CTACAAGGATCTTTGTGTGT+AGG | 0.488003 | 8_3:+14860640 | Msa1278500:three_prime_UTR |
| TGACTTGTGTTGGAGAACTA+AGG | 0.488847 | 8_3:+14859518 | Msa1278500:CDS |
| TCACTAACACTTACATAGCT+TGG | 0.490216 | 8_3:-14859789 | None:intergenic |
| GGAACTAGAAAAGCATCTCC+TGG | 0.491345 | 8_3:-14857937 | None:intergenic |
| AGAAGGAGTGTGTAAGTTCA+GGG | 0.496417 | 8_3:+14857617 | Msa1278500:CDS |
| TGTCAAAAGTGAGAGGTGGT+AGG | 0.500843 | 8_3:+14857833 | Msa1278500:CDS |
| TCCTCAGGGTGTAATTCAGA+TGG | 0.501420 | 8_3:+14857194 | Msa1278500:CDS |
| GGAGTGCAAATTGAAGCCTT+GGG | 0.507315 | 8_3:-14857594 | None:intergenic |
| GTCAAAAGTGAGAGGTGGTA+GGG | 0.523966 | 8_3:+14857834 | Msa1278500:CDS |
| CTTGATAAAATAATTTGAGA+GGG | 0.525354 | 8_3:+14860538 | Msa1278500:three_prime_UTR |
| GTTGTACCTAATGGGTTGGA+GGG | 0.531299 | 8_3:-14859666 | None:intergenic |
| AGTCGATTTCCAAGTAATGC+GGG | 0.535799 | 8_3:+14860104 | Msa1278500:CDS |
| GAGTAAATTAGAATGTCCTA+TGG | 0.537021 | 8_3:+14860496 | Msa1278500:three_prime_UTR |
| ATGCATACCCTGGATAGAAA+GGG | 0.541474 | 8_3:-14857963 | None:intergenic |
| AGGCATGACAAATTTACAAA+GGG | 0.543731 | 8_3:+14860062 | Msa1278500:CDS |
| GATTCGTCCGTGACTTGTGT+TGG | 0.550678 | 8_3:+14859508 | Msa1278500:intron |
| GGTTGTACCTAATGGGTTGG+AGG | 0.552038 | 8_3:-14859667 | None:intergenic |
| TCTTGATAAAATAATTTGAG+AGG | 0.555864 | 8_3:+14860537 | Msa1278500:three_prime_UTR |
| ACCGTATAGTGATGAGTGGA+GGG | 0.557627 | 8_3:+14857872 | Msa1278500:CDS |
| GGTGAAGCTTAATGTGTCAC+CGG | 0.558827 | 8_3:+14860214 | Msa1278500:CDS |
| TGATGAGTGGAGGGGCAACA+GGG | 0.558946 | 8_3:+14857881 | Msa1278500:CDS |
| GTGAAGCTTAATGTGTCACC+GGG | 0.563590 | 8_3:+14860215 | Msa1278500:CDS |
| TAAGGTTGTACCTAATGGGT+TGG | 0.564708 | 8_3:-14859670 | None:intergenic |
| GCTTCAATTTGCACTCCAGA+AGG | 0.564795 | 8_3:+14857600 | Msa1278500:CDS |
| TAATTTACTCCATATTCATG+TGG | 0.571162 | 8_3:-14860483 | None:intergenic |
| TTGGCATGTTATTATCAATG+AGG | 0.573325 | 8_3:+14860193 | Msa1278500:CDS |
| CTATCCCAACCCTAAAACCA+GGG | 0.576951 | 8_3:-14859884 | None:intergenic |
| CGGTGGAAATTGCATTGCAA+AGG | 0.577450 | 8_3:+14860303 | Msa1278500:CDS |
| AAATGATGTGAATGAGATCA+AGG | 0.578893 | 8_3:-14859836 | None:intergenic |
| ATTCATGTGGCTCGAACAAG+TGG | 0.579438 | 8_3:-14860470 | None:intergenic |
| AGAAAGAAAGAAAATTCCAT+AGG | 0.581526 | 8_3:-14860512 | None:intergenic |
| TTGGAGCTATCACAATGGAC+AGG | 0.589745 | 8_3:-14859552 | None:intergenic |
| ACTATCCCAACCCTAAAACC+AGG | 0.592159 | 8_3:-14859885 | None:intergenic |
| AATGATCAAGTGGTGAATTG+TGG | 0.596988 | 8_3:+14859918 | Msa1278500:CDS |
| GTGCTTACACTTGTAAACTC+AGG | 0.597517 | 8_3:-14857672 | None:intergenic |
| AAGGCATGACAAATTTACAA+AGG | 0.599045 | 8_3:+14860061 | Msa1278500:CDS |
| AACCGTATAGTGATGAGTGG+AGG | 0.599210 | 8_3:+14857871 | Msa1278500:CDS |
| ATTTACAAAGGGACTCGAAG+AGG | 0.604697 | 8_3:+14860073 | Msa1278500:CDS |
| TAGTCGATTTCCAAGTAATG+CGG | 0.607200 | 8_3:+14860103 | Msa1278500:CDS |
| TTATTCATACAATGATCAAG+TGG | 0.611105 | 8_3:+14859908 | Msa1278500:CDS |
| TAGTTCTCCAACACAAGTCA+CGG | 0.615746 | 8_3:-14859515 | None:intergenic |
| GATGAGTGGAGGGGCAACAG+GGG | 0.617588 | 8_3:+14857882 | Msa1278500:CDS |
| CCAAACCGTATAGTGATGAG+TGG | 0.624116 | 8_3:+14857868 | Msa1278500:CDS |
| CCTCAGGGTGTAATTCAGAT+GGG | 0.625600 | 8_3:+14857195 | Msa1278500:CDS |
| CTATATTAAACATGAGTTTG+GGG | 0.629964 | 8_3:+14857055 | Msa1278500:exon |
| ATCAAGTGGTGAATTGTGGA+AGG | 0.630178 | 8_3:+14859922 | Msa1278500:CDS |
| ATGGATAAAGAATAATCCCA+AGG | 0.631217 | 8_3:+14857578 | Msa1278500:CDS |
| GCTCGAACAAGTGGTGAATG+AGG | 0.631372 | 8_3:-14860461 | None:intergenic |
| TTGTACCTAATGGGTTGGAG+GGG | 0.640699 | 8_3:-14859665 | None:intergenic |
| AGAAAGTTGAAGTCAAACGT+TGG | 0.643437 | 8_3:+14860357 | Msa1278500:CDS |
| TACCCTGGATAGAAAGGGGT+AGG | 0.644778 | 8_3:-14857958 | None:intergenic |
| TTTATGTCAAAAGTGAGAGG+TGG | 0.645613 | 8_3:+14857829 | Msa1278500:CDS |
| AACACTTACATAGCTTGGTG+AGG | 0.647076 | 8_3:-14859784 | None:intergenic |
| GATATGATTATGTGATTGTG+AGG | 0.657848 | 8_3:-14860437 | None:intergenic |
| AAATTTATGTCAAAAGTGAG+AGG | 0.659568 | 8_3:+14857826 | Msa1278500:CDS |
| TGCATACCCTGGATAGAAAG+GGG | 0.660965 | 8_3:-14857962 | None:intergenic |
| AAGACAACATCAATGTAAAG+GGG | 0.661068 | 8_3:+14859628 | Msa1278500:CDS |
| TGATGAAATCTATGCAGCCA+CGG | 0.662191 | 8_3:+14859755 | Msa1278500:CDS |
| GTCTTAGCTTCACTTCAAGG+AGG | 0.672185 | 8_3:+14860393 | Msa1278500:CDS |
| CCCATCTGAATTACACCCTG+AGG | 0.694079 | 8_3:-14857195 | None:intergenic |
| GAGCAATTAAAAGAAGACCC+CGG | 0.703258 | 8_3:-14860233 | None:intergenic |
| CCGTATAGTGATGAGTGGAG+GGG | 0.710981 | 8_3:+14857873 | Msa1278500:CDS |
| AGTTGTTGGAGCTATCACAA+TGG | 0.715860 | 8_3:-14859557 | None:intergenic |
| ATTGCAACCAATGACCAACA+TGG | 0.717312 | 8_3:+14857105 | Msa1278500:CDS |
| TAATATTGATGATGAAACGG+TGG | 0.738048 | 8_3:+14860286 | Msa1278500:CDS |
| GCTTGGTGAGGTGAAAACCG+TGG | 0.787636 | 8_3:-14859772 | None:intergenic |
| TGAAGCTTAATGTGTCACCG+GGG | 0.797341 | 8_3:+14860216 | Msa1278500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGGTATAAAATATAATTA+AGG | - | chr8_3:14857028-14857047 | None:intergenic | 10.0% |
| !! | ATAATAAATTATGAAAGAAA+AGG | - | chr8_3:14857992-14858011 | None:intergenic | 10.0% |
| !!! | GTTTAATATAGTTTTCTTTA+AGG | - | chr8_3:14857046-14857065 | None:intergenic | 15.0% |
| !! | TTAAAAATAAACTACAAATG+AGG | - | chr8_3:14857375-14857394 | None:intergenic | 15.0% |
| !! | TAATGAACTAATATAATGAT+TGG | + | chr8_3:14857734-14857753 | Msa1278500:intron | 15.0% |
| !! | AATGAACTAATATAATGATT+GGG | + | chr8_3:14857735-14857754 | Msa1278500:intron | 15.0% |
| !!! | TTTATTATATATTGTTTCTC+AGG | + | chr8_3:14857795-14857814 | Msa1278500:intron | 15.0% |
| !! | TTATATTCTTTGTATAAAGT+TGG | - | chr8_3:14858473-14858492 | None:intergenic | 15.0% |
| !!! | TGATTTTGTTTTTCAAATTA+CGG | - | chr8_3:14858760-14858779 | None:intergenic | 15.0% |
| !! | ATTTGAAAAACAAAATCATA+AGG | + | chr8_3:14858762-14858781 | Msa1278500:intron | 15.0% |
| !! | TTAAAAAAAATCATATGATG+AGG | - | chr8_3:14859329-14859348 | None:intergenic | 15.0% |
| !! | AACTATATTAAACATGAGTT+TGG | + | chr8_3:14857053-14857072 | Msa1278500:exon | 20.0% |
| !! | ACTATATTAAACATGAGTTT+GGG | + | chr8_3:14857054-14857073 | Msa1278500:exon | 20.0% |
| !!! | AAAATTCTCCATATTTTGAT+GGG | + | chr8_3:14857130-14857149 | Msa1278500:CDS | 20.0% |
| !!! | ACTCATTTGTAGTTTTTTTT+TGG | + | chr8_3:14857340-14857359 | Msa1278500:intron | 20.0% |
| !! | AATAACTAGTTACATCATAT+TGG | + | chr8_3:14857485-14857504 | Msa1278500:intron | 20.0% |
| !!! | ATGTTCATTTTAAATGCTAT+TGG | - | chr8_3:14858398-14858417 | None:intergenic | 20.0% |
| !! | AAGAAAGGAATATATCATAA+AGG | + | chr8_3:14858863-14858882 | Msa1278500:intron | 20.0% |
| !! | TCTGTAGTAAAATATGAATT+AGG | - | chr8_3:14859490-14859509 | None:intergenic | 20.0% |
| !! | TATAGTTTATCAAAAGACTT+AGG | + | chr8_3:14859858-14859877 | Msa1278500:CDS | 20.0% |
| !! | ATAGTTTATCAAAAGACTTA+GGG | + | chr8_3:14859859-14859878 | Msa1278500:CDS | 20.0% |
| !!! | AAAGGATAAGAGTATTTATA+GGG | + | chr8_3:14860321-14860340 | Msa1278500:CDS | 20.0% |
| !! | TCTTGATAAAATAATTTGAG+AGG | + | chr8_3:14860537-14860556 | Msa1278500:three_prime_UTR | 20.0% |
| !! | CTTGATAAAATAATTTGAGA+GGG | + | chr8_3:14860538-14860557 | Msa1278500:three_prime_UTR | 20.0% |
| ! | CTATATTAAACATGAGTTTG+GGG | + | chr8_3:14857055-14857074 | Msa1278500:exon | 25.0% |
| !!! | GAAAATTCTCCATATTTTGA+TGG | + | chr8_3:14857129-14857148 | Msa1278500:CDS | 25.0% |
| ! | AAAAAAACTGCATGTTATTG+TGG | - | chr8_3:14857281-14857300 | None:intergenic | 25.0% |
| !!! | AGTTCATTAACCTTTTAAGT+TGG | - | chr8_3:14857723-14857742 | None:intergenic | 25.0% |
| !! | TTGGGCATATTTTTCTATAT+TGG | + | chr8_3:14857753-14857772 | Msa1278500:intron | 25.0% |
| ! | AAATTTATGTCAAAAGTGAG+AGG | + | chr8_3:14857826-14857845 | Msa1278500:CDS | 25.0% |
| !! | TGAATTAATCATGTTTTGCT+TGG | + | chr8_3:14857909-14857928 | Msa1278500:CDS | 25.0% |
| ! | GCATACATATACAATGAATA+AGG | - | chr8_3:14858017-14858036 | None:intergenic | 25.0% |
| ! | CTCAAAAATGAAGAATCATA+GGG | - | chr8_3:14858345-14858364 | None:intergenic | 25.0% |
| ! | ACTCAAAAATGAAGAATCAT+AGG | - | chr8_3:14858346-14858365 | None:intergenic | 25.0% |
| ! | ATAACTATTCCATCAACAAA+AGG | + | chr8_3:14858489-14858508 | Msa1278500:intron | 25.0% |
| ! | CTGAGATAGAAATATATAGA+GGG | + | chr8_3:14858800-14858819 | Msa1278500:intron | 25.0% |
| ! | AGATTTCATCACAAACTAAA+TGG | - | chr8_3:14859746-14859765 | None:intergenic | 25.0% |
| ! | TTATTCATACAATGATCAAG+TGG | + | chr8_3:14859908-14859927 | Msa1278500:CDS | 25.0% |
| ! | GAACTTGAAAAAATTGCTTA+AGG | + | chr8_3:14860142-14860161 | Msa1278500:CDS | 25.0% |
| !!! | TGCTAATATTGATGATGAAA+CGG | + | chr8_3:14860283-14860302 | Msa1278500:CDS | 25.0% |
| !!! | CAAAGGATAAGAGTATTTAT+AGG | + | chr8_3:14860320-14860339 | Msa1278500:CDS | 25.0% |
| ! | TAATTTACTCCATATTCATG+TGG | - | chr8_3:14860486-14860505 | None:intergenic | 25.0% |
| ! | AGAAAGAAAGAAAATTCCAT+AGG | - | chr8_3:14860515-14860534 | None:intergenic | 25.0% |
| !!! | TTTTATTTTTCTTCCTAGTG+AGG | + | chr8_3:14860597-14860616 | Msa1278500:three_prime_UTR | 25.0% |
| !!! | GATTTTTTTTAGGGTGGAAT+GGG | - | chr8_3:14857176-14857195 | None:intergenic | 30.0% |
| CTGAAAATCAGGTATATATG+TGG | + | chr8_3:14857223-14857242 | Msa1278500:intron | 30.0% | |
| ATGGATAAAGAATAATCCCA+AGG | + | chr8_3:14857578-14857597 | Msa1278500:CDS | 30.0% | |
| CTAACTTTCAAGACTATCAT+GGG | + | chr8_3:14857646-14857665 | Msa1278500:CDS | 30.0% | |
| TTTGACAAAGCCAACTTAAA+AGG | + | chr8_3:14857710-14857729 | Msa1278500:intron | 30.0% | |
| ! | ATATATTGTTTCTCAGGCTA+TGG | + | chr8_3:14857801-14857820 | Msa1278500:intron | 30.0% |
| TGCAATTACCACATAAATGT+GGG | - | chr8_3:14858370-14858389 | None:intergenic | 30.0% | |
| ACATTTATGTGGTAATTGCA+CGG | + | chr8_3:14858370-14858389 | Msa1278500:intron | 30.0% | |
| TTCTACTCATCTATTGTTGA+TGG | + | chr8_3:14858636-14858655 | Msa1278500:intron | 30.0% | |
| TCTACTCATCTATTGTTGAT+GGG | + | chr8_3:14858637-14858656 | Msa1278500:intron | 30.0% | |
| !! | GTTTTTCAAATTACGGTCAA+TGG | - | chr8_3:14858753-14858772 | None:intergenic | 30.0% |
| CAAAATCATAAGGACAATAG+AGG | + | chr8_3:14858772-14858791 | Msa1278500:intron | 30.0% | |
| GCTGAGATAGAAATATATAG+AGG | + | chr8_3:14858799-14858818 | Msa1278500:intron | 30.0% | |
| CTATTGATGTATCGTAAGAA+AGG | + | chr8_3:14858848-14858867 | Msa1278500:intron | 30.0% | |
| AACCATAAACATCTTTGTGT+AGG | + | chr8_3:14858923-14858942 | Msa1278500:intron | 30.0% | |
| ACCATAAACATCTTTGTGTA+GGG | + | chr8_3:14858924-14858943 | Msa1278500:intron | 30.0% | |
| ! | CTCATTTTCTCGTTTATACA+AGG | - | chr8_3:14858953-14858972 | None:intergenic | 30.0% |
| GAAAATGAGCAAGAAAAGTA+AGG | + | chr8_3:14858964-14858983 | Msa1278500:intron | 30.0% | |
| CTCAACCACTTATTTATGAT+CGG | - | chr8_3:14859074-14859093 | None:intergenic | 30.0% | |
| AATCATATGATGAGGCTTTA+GGG | - | chr8_3:14859321-14859340 | None:intergenic | 30.0% | |
| AAATCATATGATGAGGCTTT+AGG | - | chr8_3:14859322-14859341 | None:intergenic | 30.0% | |
| ! | TCTTGTTATCTTGAAGTTGT+TGG | - | chr8_3:14859574-14859593 | None:intergenic | 30.0% |
| AGAAGACAACATCAATGTAA+AGG | + | chr8_3:14859626-14859645 | Msa1278500:CDS | 30.0% | |
| GAAGACAACATCAATGTAAA+GGG | + | chr8_3:14859627-14859646 | Msa1278500:CDS | 30.0% | |
| AAGACAACATCAATGTAAAG+GGG | + | chr8_3:14859628-14859647 | Msa1278500:CDS | 30.0% | |
| ! | GATTGTTTTCTCATTGATGA+AGG | - | chr8_3:14859724-14859743 | None:intergenic | 30.0% |
| AAATGATGTGAATGAGATCA+AGG | - | chr8_3:14859839-14859858 | None:intergenic | 30.0% | |
| AAGGCATGACAAATTTACAA+AGG | + | chr8_3:14860061-14860080 | Msa1278500:CDS | 30.0% | |
| AGGCATGACAAATTTACAAA+GGG | + | chr8_3:14860062-14860081 | Msa1278500:CDS | 30.0% | |
| CTTGAAAAAATTGCTTAAGG+AGG | + | chr8_3:14860145-14860164 | Msa1278500:CDS | 30.0% | |
| TTGGCATGTTATTATCAATG+AGG | + | chr8_3:14860193-14860212 | Msa1278500:CDS | 30.0% | |
| !! | TAATATTGATGATGAAACGG+TGG | + | chr8_3:14860286-14860305 | Msa1278500:CDS | 30.0% |
| GTGAAGCTAAGACTTAAATT+TGG | - | chr8_3:14860386-14860405 | None:intergenic | 30.0% | |
| GATATGATTATGTGATTGTG+AGG | - | chr8_3:14860440-14860459 | None:intergenic | 30.0% | |
| GAGTAAATTAGAATGTCCTA+TGG | + | chr8_3:14860496-14860515 | Msa1278500:three_prime_UTR | 30.0% | |
| TTGCAATCTTAGACAGAAGT+TGG | - | chr8_3:14857092-14857111 | None:intergenic | 35.0% | |
| ! | ATTTTCACCATGTTGGTCAT+TGG | - | chr8_3:14857115-14857134 | None:intergenic | 35.0% |
| ! | ATGGAGAATTTTCACCATGT+TGG | - | chr8_3:14857122-14857141 | None:intergenic | 35.0% |
| !!! | ATTCTCCATATTTTGATGGG+TGG | + | chr8_3:14857133-14857152 | Msa1278500:CDS | 35.0% |
| !!! | GGATTTTTTTTAGGGTGGAA+TGG | - | chr8_3:14857177-14857196 | None:intergenic | 35.0% |
| CACCCTAAAAAAAATCCTCA+GGG | + | chr8_3:14857180-14857199 | Msa1278500:CDS | 35.0% | |
| !!! | CACCCTGAGGATTTTTTTTA+GGG | - | chr8_3:14857185-14857204 | None:intergenic | 35.0% |
| !!! | ACACCCTGAGGATTTTTTTT+AGG | - | chr8_3:14857186-14857205 | None:intergenic | 35.0% |
| GCTTTGATCTGATTGAAGAA+TGG | + | chr8_3:14857559-14857578 | Msa1278500:CDS | 35.0% | |
| GCTAACTTTCAAGACTATCA+TGG | + | chr8_3:14857645-14857664 | Msa1278500:CDS | 35.0% | |
| TTTATGTCAAAAGTGAGAGG+TGG | + | chr8_3:14857829-14857848 | Msa1278500:CDS | 35.0% | |
| TGTATGCAACCAAATTCAGA+TGG | - | chr8_3:14858117-14858136 | None:intergenic | 35.0% | |
| TTGGTTGCATACATGTCAAA+TGG | + | chr8_3:14858124-14858143 | Msa1278500:intron | 35.0% | |
| TGGTTGCATACATGTCAAAT+GGG | + | chr8_3:14858125-14858144 | Msa1278500:intron | 35.0% | |
| GTGGACAGAATTAACTTCAT+AGG | - | chr8_3:14858299-14858318 | None:intergenic | 35.0% | |
| GCAATTACCACATAAATGTG+GGG | - | chr8_3:14858369-14858388 | None:intergenic | 35.0% | |
| GTGCAATTACCACATAAATG+TGG | - | chr8_3:14858371-14858390 | None:intergenic | 35.0% | |
| ACTATTCCATCAACAAAAGG+TGG | + | chr8_3:14858492-14858511 | Msa1278500:intron | 35.0% | |
| ! | GTCATGAGGTAGTCTATTTT+GGG | - | chr8_3:14858704-14858723 | None:intergenic | 35.0% |
| ! | AGTCATGAGGTAGTCTATTT+TGG | - | chr8_3:14858705-14858724 | None:intergenic | 35.0% |
| ACCCTACACAAAGATGTTTA+TGG | - | chr8_3:14858928-14858947 | None:intergenic | 35.0% | |
| AAGAAAAGTAAGGAACACGA+TGG | + | chr8_3:14858974-14858993 | Msa1278500:intron | 35.0% | |
| ACCACTTATTTATGATCGGA+CGG | - | chr8_3:14859070-14859089 | None:intergenic | 35.0% | |
| GCCATAAAACATTGATCCAA+CGG | - | chr8_3:14859133-14859152 | None:intergenic | 35.0% | |
| AAAAATATGTCACACAGACC+TGG | - | chr8_3:14859205-14859224 | None:intergenic | 35.0% | |
| !!! | GGTCTGTGTGACATATTTTT+TGG | + | chr8_3:14859205-14859224 | Msa1278500:intron | 35.0% |
| !! | TTTTTGGTGACATTCTCTCA+TGG | - | chr8_3:14859252-14859271 | None:intergenic | 35.0% |
| ! | GCTTGGCTGACATTAATTTT+TGG | - | chr8_3:14859268-14859287 | None:intergenic | 35.0% |
| ! | TGTCTAAGGTTGTACCTAAT+GGG | - | chr8_3:14859677-14859696 | None:intergenic | 35.0% |
| ! | TTGTCTAAGGTTGTACCTAA+TGG | - | chr8_3:14859678-14859697 | None:intergenic | 35.0% |
| CTTTAGTGTCTCTTTGTCTA+AGG | - | chr8_3:14859691-14859710 | None:intergenic | 35.0% | |
| TCACTAACACTTACATAGCT+TGG | - | chr8_3:14859792-14859811 | None:intergenic | 35.0% | |
| AATGATCAAGTGGTGAATTG+TGG | + | chr8_3:14859918-14859937 | Msa1278500:CDS | 35.0% | |
| !! | TTCTTTTAGAGAGTTCGAGA+AGG | + | chr8_3:14860030-14860049 | Msa1278500:CDS | 35.0% |
| GTTCGAGAAGGTTGTTAAAA+AGG | + | chr8_3:14860042-14860061 | Msa1278500:CDS | 35.0% | |
| ! | TAGTCGATTTCCAAGTAATG+CGG | + | chr8_3:14860103-14860122 | Msa1278500:CDS | 35.0% |
| TTGAAGAAGAGTTGAAGCTT+TGG | + | chr8_3:14860174-14860193 | Msa1278500:CDS | 35.0% | |
| !! | GTCTTCTTTTAATTGCTCTG+AGG | + | chr8_3:14860238-14860257 | Msa1278500:CDS | 35.0% |
| !!! | TCTTTTAATTGCTCTGAGGT+TGG | + | chr8_3:14860242-14860261 | Msa1278500:CDS | 35.0% |
| AGAAAGTTGAAGTCAAACGT+TGG | + | chr8_3:14860357-14860376 | Msa1278500:CDS | 35.0% | |
| TAAGTCTTAGCTTCACTTCA+AGG | + | chr8_3:14860390-14860409 | Msa1278500:CDS | 35.0% | |
| ACTATCGAAAAAACCTCACT+AGG | - | chr8_3:14860613-14860632 | None:intergenic | 35.0% | |
| ! | AGCTAATTTGTGTGTGAAGT+AGG | + | chr8_3:14860682-14860701 | Msa1278500:three_prime_UTR | 35.0% |
| ATTGCAACCAATGACCAACA+TGG | + | chr8_3:14857105-14857124 | Msa1278500:CDS | 40.0% | |
| GCTTTCCACCCATCAAAATA+TGG | - | chr8_3:14857141-14857160 | None:intergenic | 40.0% | |
| !!! | CCTGAGGATTTTTTTTAGGG+TGG | - | chr8_3:14857182-14857201 | None:intergenic | 40.0% |
| CCACCCTAAAAAAAATCCTC+AGG | + | chr8_3:14857179-14857198 | Msa1278500:CDS | 40.0% | |
| ! | AGAAGGAGTGTGTAAGTTCA+GGG | + | chr8_3:14857617-14857636 | Msa1278500:CDS | 40.0% |
| GTGCTTACACTTGTAAACTC+AGG | - | chr8_3:14857675-14857694 | None:intergenic | 40.0% | |
| ATGCATACCCTGGATAGAAA+GGG | - | chr8_3:14857966-14857985 | None:intergenic | 40.0% | |
| GTGATAAAATCTATGTGCCG+TGG | + | chr8_3:14858089-14858108 | Msa1278500:intron | 40.0% | |
| TTTGAGTCCCCACATTTATG+TGG | + | chr8_3:14858359-14858378 | Msa1278500:intron | 40.0% | |
| ACACGACTCAGACATAAGTT+AGG | + | chr8_3:14858428-14858447 | Msa1278500:intron | 40.0% | |
| ! | GAAACTCCACCTTTTGTTGA+TGG | - | chr8_3:14858501-14858520 | None:intergenic | 40.0% |
| ! | TAAGGAACACGATGGATTTC+AGG | + | chr8_3:14858982-14859001 | Msa1278500:intron | 40.0% |
| ! | GCCGTTGGATCAATGTTTTA+TGG | + | chr8_3:14859129-14859148 | Msa1278500:intron | 40.0% |
| GTTTCGGAAAGTGATTGAGT+TGG | + | chr8_3:14859290-14859309 | Msa1278500:intron | 40.0% | |
| TAGTTCTCCAACACAAGTCA+CGG | - | chr8_3:14859518-14859537 | None:intergenic | 40.0% | |
| ! | TGACTTGTGTTGGAGAACTA+AGG | + | chr8_3:14859518-14859537 | Msa1278500:CDS | 40.0% |
| AGTTGTTGGAGCTATCACAA+TGG | - | chr8_3:14859560-14859579 | None:intergenic | 40.0% | |
| ! | TAAGGTTGTACCTAATGGGT+TGG | - | chr8_3:14859673-14859692 | None:intergenic | 40.0% |
| TGATGAAATCTATGCAGCCA+CGG | + | chr8_3:14859755-14859774 | Msa1278500:CDS | 40.0% | |
| ! | AACACTTACATAGCTTGGTG+AGG | - | chr8_3:14859787-14859806 | None:intergenic | 40.0% |
| ATCAAGTGGTGAATTGTGGA+AGG | + | chr8_3:14859922-14859941 | Msa1278500:CDS | 40.0% | |
| GGAAGGAAAATGTCAAGCTT+TGG | + | chr8_3:14859939-14859958 | Msa1278500:CDS | 40.0% | |
| ATTTACAAAGGGACTCGAAG+AGG | + | chr8_3:14860073-14860092 | Msa1278500:CDS | 40.0% | |
| ! | AGTCGATTTCCAAGTAATGC+GGG | + | chr8_3:14860104-14860123 | Msa1278500:CDS | 40.0% |
| CAAAAAAGTCCCGCATTACT+TGG | - | chr8_3:14860116-14860135 | None:intergenic | 40.0% | |
| !!! | GTAATGCGGGACTTTTTTGT+TGG | + | chr8_3:14860117-14860136 | Msa1278500:CDS | 40.0% |
| GAGCAATTAAAAGAAGACCC+CGG | - | chr8_3:14860236-14860255 | None:intergenic | 40.0% | |
| !! | TTAATTGCTCTGAGGTTGGT+TGG | + | chr8_3:14860246-14860265 | Msa1278500:CDS | 40.0% |
| TTGTTCGAGCCACATGAATA+TGG | + | chr8_3:14860474-14860493 | Msa1278500:exon | 40.0% | |
| TCACAAATAGCTAGCTAGCT+AGG | - | chr8_3:14860577-14860596 | None:intergenic | 40.0% | |
| ! | TCGATAGTGTTCTAGCTACA+AGG | + | chr8_3:14860625-14860644 | Msa1278500:three_prime_UTR | 40.0% |
| CTACAAGGATCTTTGTGTGT+AGG | + | chr8_3:14860640-14860659 | Msa1278500:three_prime_UTR | 40.0% | |
| TCCTCAGGGTGTAATTCAGA+TGG | + | chr8_3:14857194-14857213 | Msa1278500:CDS | 45.0% | |
| CCTCAGGGTGTAATTCAGAT+GGG | + | chr8_3:14857195-14857214 | Msa1278500:CDS | 45.0% | |
| GATGGGTCTTGCTGAAAATC+AGG | + | chr8_3:14857212-14857231 | Msa1278500:CDS | 45.0% | |
| GGAGTGCAAATTGAAGCCTT+GGG | - | chr8_3:14857597-14857616 | None:intergenic | 45.0% | |
| TGGAGTGCAAATTGAAGCCT+TGG | - | chr8_3:14857598-14857617 | None:intergenic | 45.0% | |
| GCTTCAATTTGCACTCCAGA+AGG | + | chr8_3:14857600-14857619 | Msa1278500:CDS | 45.0% | |
| CTGAACTTACACACTCCTTC+TGG | - | chr8_3:14857618-14857637 | None:intergenic | 45.0% | |
| ! | CAGAAGGAGTGTGTAAGTTC+AGG | + | chr8_3:14857616-14857635 | Msa1278500:CDS | 45.0% |
| TGTCAAAAGTGAGAGGTGGT+AGG | + | chr8_3:14857833-14857852 | Msa1278500:CDS | 45.0% | |
| GTCAAAAGTGAGAGGTGGTA+GGG | + | chr8_3:14857834-14857853 | Msa1278500:CDS | 45.0% | |
| CCACTCATCACTATACGGTT+TGG | - | chr8_3:14857871-14857890 | None:intergenic | 45.0% | |
| CCAAACCGTATAGTGATGAG+TGG | + | chr8_3:14857868-14857887 | Msa1278500:CDS | 45.0% | |
| AACCGTATAGTGATGAGTGG+AGG | + | chr8_3:14857871-14857890 | Msa1278500:CDS | 45.0% | |
| ACCGTATAGTGATGAGTGGA+GGG | + | chr8_3:14857872-14857891 | Msa1278500:CDS | 45.0% | |
| ! | ATGTTTTGCTTGGCTGATCC+AGG | + | chr8_3:14857919-14857938 | Msa1278500:CDS | 45.0% |
| !! | GGAACTAGAAAAGCATCTCC+TGG | - | chr8_3:14857940-14857959 | None:intergenic | 45.0% |
| TTCCTACCCCTTTCTATCCA+GGG | + | chr8_3:14857956-14857975 | Msa1278500:CDS | 45.0% | |
| TGCATACCCTGGATAGAAAG+GGG | - | chr8_3:14857965-14857984 | None:intergenic | 45.0% | |
| CATGCATACCCTGGATAGAA+AGG | - | chr8_3:14857967-14857986 | None:intergenic | 45.0% | |
| ! | GAAAAGGTACATGCATACCC+TGG | - | chr8_3:14857976-14857995 | None:intergenic | 45.0% |
| ! | ACCAAATTCAGATGGTGCCA+CGG | - | chr8_3:14858109-14858128 | None:intergenic | 45.0% |
| CTACCTCATGACTCATAGCT+TGG | + | chr8_3:14858712-14858731 | Msa1278500:intron | 45.0% | |
| AGATTTCCTGCTGTAACAGC+AGG | + | chr8_3:14859009-14859028 | Msa1278500:intron | 45.0% | |
| TGTAACAGCAGGATGCTGTA+AGG | + | chr8_3:14859020-14859039 | Msa1278500:intron | 45.0% | |
| GCCGTCCGATCATAAATAAG+TGG | + | chr8_3:14859066-14859085 | Msa1278500:intron | 45.0% | |
| GTAGAACAAATCTGAGCCGT+TGG | + | chr8_3:14859114-14859133 | Msa1278500:intron | 45.0% | |
| !! | TCGGAAAGTGATTGAGTTGG+TGG | + | chr8_3:14859293-14859312 | Msa1278500:intron | 45.0% |
| TTGGAGCTATCACAATGGAC+AGG | - | chr8_3:14859555-14859574 | None:intergenic | 45.0% | |
| !! | TTGTACCTAATGGGTTGGAG+GGG | - | chr8_3:14859668-14859687 | None:intergenic | 45.0% |
| !! | GTTGTACCTAATGGGTTGGA+GGG | - | chr8_3:14859669-14859688 | None:intergenic | 45.0% |
| TCAAAAGACTTAGGGTTCCC+TGG | + | chr8_3:14859867-14859886 | Msa1278500:CDS | 45.0% | |
| !! | ACTTAGGGTTCCCTGGTTTT+AGG | + | chr8_3:14859874-14859893 | Msa1278500:CDS | 45.0% |
| !!! | CTTAGGGTTCCCTGGTTTTA+GGG | + | chr8_3:14859875-14859894 | Msa1278500:CDS | 45.0% |
| CTATCCCAACCCTAAAACCA+GGG | - | chr8_3:14859887-14859906 | None:intergenic | 45.0% | |
| ACTATCCCAACCCTAAAACC+AGG | - | chr8_3:14859888-14859907 | None:intergenic | 45.0% | |
| GGTGAAGCTTAATGTGTCAC+CGG | + | chr8_3:14860214-14860233 | Msa1278500:CDS | 45.0% | |
| GTGAAGCTTAATGTGTCACC+GGG | + | chr8_3:14860215-14860234 | Msa1278500:CDS | 45.0% | |
| TGAAGCTTAATGTGTCACCG+GGG | + | chr8_3:14860216-14860235 | Msa1278500:CDS | 45.0% | |
| !! | CTCTGAGGTTGGTTGGTTTA+GGG | + | chr8_3:14860253-14860272 | Msa1278500:CDS | 45.0% |
| CGGTGGAAATTGCATTGCAA+AGG | + | chr8_3:14860303-14860322 | Msa1278500:CDS | 45.0% | |
| GTCTTAGCTTCACTTCAAGG+AGG | + | chr8_3:14860393-14860412 | Msa1278500:CDS | 45.0% | |
| ATTCATGTGGCTCGAACAAG+TGG | - | chr8_3:14860473-14860492 | None:intergenic | 45.0% | |
| !!! | ATCAAATAAATAATTTTAAT+TGG | - | chr8_3:14858566-14858585 | None:intergenic | 5.0% |
| CCCATCTGAATTACACCCTG+AGG | - | chr8_3:14857198-14857217 | None:intergenic | 50.0% | |
| CCCCTCCACTCATCACTATA+CGG | - | chr8_3:14857876-14857895 | None:intergenic | 50.0% | |
| CCGTATAGTGATGAGTGGAG+GGG | + | chr8_3:14857873-14857892 | Msa1278500:CDS | 50.0% | |
| GTTCCTACCCCTTTCTATCC+AGG | + | chr8_3:14857955-14857974 | Msa1278500:CDS | 50.0% | |
| TACCCTGGATAGAAAGGGGT+AGG | - | chr8_3:14857961-14857980 | None:intergenic | 50.0% | |
| TCCACCTCTCCATCTAAGTG+AGG | + | chr8_3:14858314-14858333 | Msa1278500:intron | 50.0% | |
| ACCTCACTTAGATGGAGAGG+TGG | - | chr8_3:14858318-14858337 | None:intergenic | 50.0% | |
| GACACCTCACTTAGATGGAG+AGG | - | chr8_3:14858321-14858340 | None:intergenic | 50.0% | |
| AGGGTGACACCTCACTTAGA+TGG | - | chr8_3:14858326-14858345 | None:intergenic | 50.0% | |
| CCACCAAGCTATGAGTCATG+AGG | - | chr8_3:14858718-14858737 | None:intergenic | 50.0% | |
| CCTCATGACTCATAGCTTGG+TGG | + | chr8_3:14858715-14858734 | Msa1278500:intron | 50.0% | |
| AATGTCAGCCAAGCGCGTTT+CGG | + | chr8_3:14859274-14859293 | Msa1278500:intron | 50.0% | |
| ATCACTTTCCGAAACGCGCT+TGG | - | chr8_3:14859285-14859304 | None:intergenic | 50.0% | |
| ! | GATTCGTCCGTGACTTGTGT+TGG | + | chr8_3:14859508-14859527 | Msa1278500:intron | 50.0% |
| ACAAACCCCTCCAACCCATT+AGG | + | chr8_3:14859660-14859679 | Msa1278500:CDS | 50.0% | |
| !! | GGTTGTACCTAATGGGTTGG+AGG | - | chr8_3:14859670-14859689 | None:intergenic | 50.0% |
| !!! | GGTTCCCTGGTTTTAGGGTT+GGG | + | chr8_3:14859880-14859899 | Msa1278500:CDS | 50.0% |
| !! | GCTCTGAGGTTGGTTGGTTT+AGG | + | chr8_3:14860252-14860271 | Msa1278500:CDS | 50.0% |
| GCTCGAACAAGTGGTGAATG+AGG | - | chr8_3:14860464-14860483 | None:intergenic | 50.0% | |
| TGATGAGTGGAGGGGCAACA+GGG | + | chr8_3:14857881-14857900 | Msa1278500:CDS | 55.0% | |
| GCCGTGGCACCATCTGAATT+TGG | + | chr8_3:14858105-14858124 | Msa1278500:intron | 55.0% | |
| CAGCATCCTGCTGTTACAGC+AGG | - | chr8_3:14859018-14859037 | None:intergenic | 55.0% | |
| CAGCAGGATGCTGTAACAGC+AGG | + | chr8_3:14859025-14859044 | Msa1278500:intron | 55.0% | |
| ! | CAACACGCTGTTTCACGCTG+TGG | - | chr8_3:14859165-14859184 | None:intergenic | 55.0% |
| AGCGTGTTGCAGCTACAGCA+GGG | + | chr8_3:14859176-14859195 | Msa1278500:intron | 55.0% | |
| ! | GCTTGGTGAGGTGAAAACCG+TGG | - | chr8_3:14859775-14859794 | None:intergenic | 55.0% |
| !!! | GGGTTCCCTGGTTTTAGGGT+TGG | + | chr8_3:14859879-14859898 | Msa1278500:CDS | 55.0% |
| GTGATGAGTGGAGGGGCAAC+AGG | + | chr8_3:14857880-14857899 | Msa1278500:CDS | 60.0% | |
| GATGAGTGGAGGGGCAACAG+GGG | + | chr8_3:14857882-14857901 | Msa1278500:CDS | 60.0% | |
| CAGCGTGTTGCAGCTACAGC+AGG | + | chr8_3:14859175-14859194 | Msa1278500:intron | 60.0% | |
| GCAGCTACAGCAGGGAATCC+AGG | + | chr8_3:14859184-14859203 | Msa1278500:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 14857009 | 14860705 | 14857009 | ID=Msa1278500;Name=Msa1278500 |
| chr8_3 | mRNA | 14857009 | 14860705 | 14857009 | ID=Msa1278500-mRNA-1;Parent=Msa1278500;Name=Msa1278500-mRNA-1;_AED=0.06;_eAED=0.06;_QI=57|1|1|1|1|1|4|215|480 |
| chr8_3 | exon | 14857009 | 14857233 | 14857009 | ID=Msa1278500-mRNA-1:exon:5755;Parent=Msa1278500-mRNA-1 |
| chr8_3 | exon | 14857555 | 14857686 | 14857555 | ID=Msa1278500-mRNA-1:exon:5756;Parent=Msa1278500-mRNA-1 |
| chr8_3 | exon | 14857817 | 14857977 | 14857817 | ID=Msa1278500-mRNA-1:exon:5757;Parent=Msa1278500-mRNA-1 |
| chr8_3 | exon | 14859509 | 14860705 | 14859509 | ID=Msa1278500-mRNA-1:exon:5758;Parent=Msa1278500-mRNA-1 |
| chr8_3 | five_prime_UTR | 14857009 | 14857065 | 14857009 | ID=Msa1278500-mRNA-1:five_prime_utr;Parent=Msa1278500-mRNA-1 |
| chr8_3 | CDS | 14857066 | 14857233 | 14857066 | ID=Msa1278500-mRNA-1:cds;Parent=Msa1278500-mRNA-1 |
| chr8_3 | CDS | 14857555 | 14857686 | 14857555 | ID=Msa1278500-mRNA-1:cds;Parent=Msa1278500-mRNA-1 |
| chr8_3 | CDS | 14857817 | 14857977 | 14857817 | ID=Msa1278500-mRNA-1:cds;Parent=Msa1278500-mRNA-1 |
| chr8_3 | CDS | 14859509 | 14860490 | 14859509 | ID=Msa1278500-mRNA-1:cds;Parent=Msa1278500-mRNA-1 |
| chr8_3 | three_prime_UTR | 14860491 | 14860705 | 14860491 | ID=Msa1278500-mRNA-1:three_prime_utr;Parent=Msa1278500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
