Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1237350 | XP_013444776.1 | 97.708 | 480 | 11 | 0 | 1 | 480 | 1 | 480 | 0.0 | 985 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1237350 | sp|Q9MB95|1A11_PRUMU | 70.954 | 482 | 125 | 3 | 10 | 479 | 12 | 490 | 0.0 | 705 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1237350 | Msa1270660 | 0.803389 | 3.568143e-49 | -8.615850e-47 |
| Msa1237350 | Msa1270730 | 0.802000 | 6.905042e-49 | -8.615850e-47 |
| Msa1237350 | Msa1278500 | 0.877329 | 6.857706e-69 | -8.615850e-47 |
| Msa1237350 | Msa1317770 | 0.907055 | 7.658601e-81 | -8.615850e-47 |
| Msa1237350 | Msa1335230 | 0.801140 | 1.036175e-48 | -8.615850e-47 |
| Msa1237350 | Msa1423820 | 0.802251 | 6.128948e-49 | -8.615850e-47 |
| Msa0474420 | Msa1237350 | 0.806483 | 8.047337e-50 | -8.615850e-47 |
| Msa1026640 | Msa1237350 | 0.803557 | 3.293711e-49 | -8.615850e-47 |
| Msa1107260 | Msa1237350 | 0.818883 | 1.553195e-52 | -8.615850e-47 |
| Msa0518840 | Msa1237350 | 0.809450 | 1.881269e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1237350 | MtrunA17_Chr8g0348351 | 97.708 | 480 | 11 | 0 | 1 | 480 | 1 | 480 | 0.0 | 985 |
| Msa1237350 | MtrunA17_Chr7g0248681 | 79.339 | 484 | 96 | 3 | 1 | 480 | 1 | 484 | 0.0 | 782 |
| Msa1237350 | MtrunA17_Chr8g0387481 | 65.417 | 480 | 155 | 3 | 9 | 480 | 10 | 486 | 0.0 | 677 |
| Msa1237350 | MtrunA17_Chr6g0488041 | 56.250 | 432 | 187 | 2 | 11 | 441 | 14 | 444 | 0.0 | 526 |
| Msa1237350 | MtrunA17_Chr4g0054371 | 52.860 | 437 | 196 | 2 | 9 | 435 | 2 | 438 | 0.0 | 515 |
| Msa1237350 | MtrunA17_Chr8g0389311 | 54.779 | 429 | 186 | 2 | 11 | 438 | 12 | 433 | 0.0 | 513 |
| Msa1237350 | MtrunA17_Chr8g0389321 | 54.779 | 429 | 186 | 2 | 11 | 438 | 12 | 433 | 0.0 | 513 |
| Msa1237350 | MtrunA17_Chr3g0135251 | 53.756 | 426 | 192 | 2 | 10 | 430 | 1 | 426 | 2.80e-177 | 506 |
| Msa1237350 | MtrunA17_Chr5g0400831 | 53.118 | 433 | 194 | 3 | 9 | 432 | 2 | 434 | 5.10e-177 | 505 |
| Msa1237350 | MtrunA17_Chr6g0475681 | 41.766 | 419 | 243 | 1 | 11 | 428 | 104 | 522 | 4.03e-129 | 385 |
| Msa1237350 | MtrunA17_Chr5g0398431 | 39.609 | 409 | 246 | 1 | 23 | 430 | 84 | 492 | 5.32e-116 | 350 |
| Msa1237350 | MtrunA17_Chr2g0324801 | 22.126 | 348 | 239 | 11 | 94 | 430 | 51 | 377 | 3.43e-13 | 71.2 |
| Msa1237350 | MtrunA17_Chr5g0412871 | 23.729 | 177 | 130 | 4 | 86 | 260 | 100 | 273 | 5.49e-13 | 70.9 |
| Msa1237350 | MtrunA17_Chr8g0345201 | 23.284 | 335 | 232 | 11 | 119 | 430 | 182 | 514 | 6.82e-12 | 67.8 |
| Msa1237350 | MtrunA17_Chr7g0267911 | 20.615 | 325 | 232 | 11 | 114 | 428 | 153 | 461 | 5.06e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1237350 | AT3G61510.1 | 64.588 | 497 | 149 | 5 | 1 | 479 | 1 | 488 | 0.0 | 665 |
| Msa1237350 | AT1G01480.1 | 62.702 | 496 | 161 | 5 | 4 | 479 | 5 | 496 | 0.0 | 645 |
| Msa1237350 | AT4G11280.1 | 63.034 | 468 | 160 | 4 | 6 | 460 | 10 | 477 | 0.0 | 615 |
| Msa1237350 | AT4G37770.1 | 57.277 | 426 | 178 | 1 | 10 | 431 | 3 | 428 | 0.0 | 528 |
| Msa1237350 | AT4G26200.1 | 57.110 | 429 | 181 | 2 | 11 | 436 | 18 | 446 | 0.0 | 521 |
| Msa1237350 | AT4G08040.1 | 53.540 | 452 | 198 | 3 | 10 | 449 | 1 | 452 | 0.0 | 521 |
| Msa1237350 | AT2G22810.1 | 54.503 | 433 | 192 | 2 | 11 | 438 | 4 | 436 | 2.52e-176 | 503 |
| Msa1237350 | AT3G49700.1 | 53.563 | 435 | 194 | 2 | 11 | 439 | 4 | 436 | 2.69e-174 | 498 |
| Msa1237350 | AT5G65800.1 | 53.864 | 427 | 192 | 2 | 9 | 431 | 3 | 428 | 9.43e-174 | 497 |
| Msa1237350 | AT1G01480.2 | 61.675 | 394 | 127 | 5 | 106 | 479 | 1 | 390 | 1.35e-171 | 488 |
| Msa1237350 | AT5G51690.1 | 41.032 | 407 | 239 | 1 | 23 | 428 | 81 | 487 | 9.23e-122 | 365 |
| Msa1237350 | AT1G62960.1 | 39.467 | 413 | 241 | 6 | 19 | 428 | 141 | 547 | 1.03e-107 | 331 |
| Msa1237350 | AT5G51690.2 | 41.360 | 353 | 207 | 0 | 76 | 428 | 12 | 364 | 1.43e-106 | 322 |
| Msa1237350 | AT1G72330.1 | 24.107 | 336 | 232 | 9 | 117 | 430 | 196 | 530 | 6.48e-16 | 80.9 |
| Msa1237350 | AT1G23310.2 | 26.554 | 177 | 125 | 4 | 86 | 260 | 100 | 273 | 1.62e-15 | 79.0 |
| Msa1237350 | AT1G23310.1 | 26.554 | 177 | 125 | 4 | 86 | 260 | 100 | 273 | 2.03e-15 | 79.0 |
| Msa1237350 | AT1G17290.1 | 24.036 | 337 | 231 | 11 | 117 | 430 | 199 | 533 | 3.86e-14 | 75.1 |
| Msa1237350 | AT1G72330.2 | 26.667 | 210 | 146 | 6 | 117 | 319 | 196 | 404 | 4.53e-14 | 74.3 |
| Msa1237350 | AT4G23600.1 | 23.913 | 368 | 232 | 13 | 94 | 442 | 78 | 416 | 7.74e-14 | 73.6 |
| Msa1237350 | AT1G72330.3 | 22.923 | 349 | 233 | 9 | 117 | 430 | 196 | 543 | 9.68e-14 | 73.9 |
| Msa1237350 | AT1G70580.4 | 24.859 | 177 | 128 | 4 | 86 | 260 | 100 | 273 | 1.22e-13 | 73.6 |
| Msa1237350 | AT1G70580.2 | 24.859 | 177 | 128 | 4 | 86 | 260 | 100 | 273 | 1.22e-13 | 73.6 |
| Msa1237350 | AT1G70580.3 | 24.859 | 177 | 128 | 4 | 86 | 260 | 100 | 273 | 1.22e-13 | 73.6 |
| Msa1237350 | AT1G70580.1 | 24.859 | 177 | 128 | 4 | 86 | 260 | 100 | 273 | 1.22e-13 | 73.6 |
| Msa1237350 | AT1G77670.1 | 24.011 | 354 | 233 | 15 | 93 | 439 | 116 | 440 | 1.52e-12 | 69.7 |
| Msa1237350 | AT4G23600.2 | 24.629 | 337 | 212 | 11 | 123 | 442 | 1 | 312 | 3.48e-12 | 67.8 |
| Msa1237350 | AT4G28420.2 | 20.556 | 360 | 244 | 10 | 94 | 437 | 103 | 436 | 1.34e-11 | 67.0 |
| Msa1237350 | AT5G53970.1 | 21.271 | 362 | 241 | 13 | 94 | 438 | 76 | 410 | 1.44e-11 | 66.6 |
Find 110 sgRNAs with CRISPR-Local
Find 227 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTGAGGTTGGTTGGTTTA+GGG | 0.190705 | 8_2:+16728788 | Msa1237350:CDS |
| GAAGACAACATCAATGTAAA+AGG | 0.199753 | 8_2:+16728162 | Msa1237350:CDS |
| GTTCGAGAAGGTTGTTAAAA+AGG | 0.241887 | 8_2:+16728577 | Msa1237350:CDS |
| AACTATATTAAACATGAGTT+TGG | 0.249029 | 8_2:+16725653 | Msa1237350:exon |
| GCTCTGAGGTTGGTTGGTTT+AGG | 0.251907 | 8_2:+16728787 | Msa1237350:CDS |
| AGATTTCATCACAAACTAAA+TGG | 0.259841 | 8_2:-16728278 | None:intergenic |
| GTGAAGCTAAGACTTAAATT+TGG | 0.263791 | 8_2:-16728918 | None:intergenic |
| CTTTAGTGTCTCTTTGTCTA+AGG | 0.264938 | 8_2:-16728223 | None:intergenic |
| TTGTCTAAGGTTGTACCTAA+TGG | 0.267027 | 8_2:-16728210 | None:intergenic |
| TCTTGTTATCTTGAAGTTGT+TGG | 0.286651 | 8_2:-16728106 | None:intergenic |
| CAAAGGATAAGAGTATTTAT+AGG | 0.307066 | 8_2:+16728855 | Msa1237350:CDS |
| TTGGTCATTGGTTGCAATCT+TGG | 0.315539 | 8_2:-16725700 | None:intergenic |
| TTGATGAGTGGAGGGGCAAC+AGG | 0.323585 | 8_2:+16726332 | Msa1237350:CDS |
| ACTATATTAAACATGAGTTT+GGG | 0.323778 | 8_2:+16725654 | Msa1237350:exon |
| TTGTTCGAGCCACATGAATA+TGG | 0.328758 | 8_2:+16729009 | Msa1237350:exon |
| CTGAACTTACACACTCCTTC+TGG | 0.332505 | 8_2:-16726062 | None:intergenic |
| GCTTTCCACCCATCAAAATA+TGG | 0.339867 | 8_2:-16725738 | None:intergenic |
| TGTCTAAGGTTGTACCTAAT+GGG | 0.346338 | 8_2:-16728209 | None:intergenic |
| AAAGGATAAGAGTATTTATA+GGG | 0.354733 | 8_2:+16728856 | Msa1237350:CDS |
| TATAGTTTATCAAAAGACTT+AGG | 0.366855 | 8_2:+16728393 | Msa1237350:CDS |
| GGAAGGAAAATGTCAAGCTT+TGG | 0.368075 | 8_2:+16728474 | Msa1237350:CDS |
| GTTCCTACCCCTTTCTATCC+AGG | 0.392300 | 8_2:+16726407 | Msa1237350:CDS |
| CAGAAGGAGTGTGTAAGTTC+AGG | 0.392726 | 8_2:+16726063 | Msa1237350:CDS |
| TAAGTCTTAGCTTCACTTCA+AGG | 0.396222 | 8_2:+16728925 | Msa1237350:CDS |
| GCTAACTTTCAAGACTATCA+TGG | 0.397089 | 8_2:+16726092 | Msa1237350:CDS |
| TGGAGTGCAAATTGAAGCCT+TGG | 0.407080 | 8_2:-16726042 | None:intergenic |
| TTGAAGAAGAGTTGAAGCTT+TGG | 0.411415 | 8_2:+16728709 | Msa1237350:CDS |
| CCCCTCCACTCATCAATATA+CGG | 0.413279 | 8_2:-16726325 | None:intergenic |
| TTAATTGCTCTGAGGTTGGT+TGG | 0.417602 | 8_2:+16728781 | Msa1237350:CDS |
| GATGGGTCTTGCTGAAAATC+AGG | 0.425500 | 8_2:+16725812 | Msa1237350:CDS |
| AGCTAATTTGTGTGTGAAGT+AGG | 0.432425 | 8_2:+16729217 | Msa1237350:three_prime_UTR |
| ACAAACCCCTCCAACCCATT+AGG | 0.442463 | 8_2:+16728195 | Msa1237350:CDS |
| GCTTTGATCTGATTGAAGAA+TGG | 0.457254 | 8_2:+16726006 | Msa1237350:CDS |
| CCACTCATCAATATACGGTT+AGG | 0.463785 | 8_2:-16726320 | None:intergenic |
| CATGCATACCCTGGATAGAA+AGG | 0.467439 | 8_2:-16726416 | None:intergenic |
| TCGATAGTGTTCTAGCTACA+AGG | 0.469720 | 8_2:+16729160 | Msa1237350:three_prime_UTR |
| GCTAATTTGTGTGTGAAGTA+GGG | 0.475551 | 8_2:+16729218 | Msa1237350:three_prime_UTR |
| CTAACTTTCAAGACTATCAT+GGG | 0.476455 | 8_2:+16726093 | Msa1237350:CDS |
| ATAGTTTATCAAAAGACTTA+GGG | 0.480641 | 8_2:+16728394 | Msa1237350:CDS |
| TGCTAATATTGATGATGAAA+CGG | 0.483936 | 8_2:+16728818 | Msa1237350:CDS |
| TCAAAAGACTTAGGGTTCCC+TGG | 0.484527 | 8_2:+16728402 | Msa1237350:CDS |
| TCACTAACACTTACATAGCT+TGG | 0.485073 | 8_2:-16728324 | None:intergenic |
| TTCCTACCCCTTTCTATCCA+GGG | 0.485138 | 8_2:+16726408 | Msa1237350:CDS |
| TCACAAATAGCTAGCTAGCT+AGG | 0.487848 | 8_2:-16729109 | None:intergenic |
| TGACTTGTGTTGGAGAACTA+AGG | 0.488847 | 8_2:+16728053 | Msa1237350:CDS |
| GGAACTAGAAAAGCATCTCC+TGG | 0.491345 | 8_2:-16726389 | None:intergenic |
| AGAAGGAGTGTGTAAGTTCA+GGG | 0.496417 | 8_2:+16726064 | Msa1237350:CDS |
| TGTCAAAAGTGAGAGGTGGT+AGG | 0.500843 | 8_2:+16726285 | Msa1237350:CDS |
| TCCTCAGGGTGTAATTCAGA+TGG | 0.501420 | 8_2:+16725794 | Msa1237350:CDS |
| GGAGTGCAAATTGAAGCCTT+GGG | 0.507315 | 8_2:-16726041 | None:intergenic |
| GTCAAAAGTGAGAGGTGGTA+GGG | 0.523966 | 8_2:+16726286 | Msa1237350:CDS |
| CTACAAGGATCTTTGTGTGT+AGG | 0.524463 | 8_2:+16729175 | Msa1237350:three_prime_UTR |
| CTTGATAAAATAATTTGAGA+GGG | 0.525354 | 8_2:+16729073 | Msa1237350:three_prime_UTR |
| AAGACAACATCAATGTAAAA+GGG | 0.526004 | 8_2:+16728163 | Msa1237350:CDS |
| GTTGTACCTAATGGGTTGGA+GGG | 0.531299 | 8_2:-16728201 | None:intergenic |
| AGTCGATTTCCAAGTAATGC+GGG | 0.535799 | 8_2:+16728639 | Msa1237350:CDS |
| GAGTAAATTAGAATGTCCTA+TGG | 0.537021 | 8_2:+16729031 | Msa1237350:three_prime_UTR |
| ATGCATACCCTGGATAGAAA+GGG | 0.541474 | 8_2:-16726415 | None:intergenic |
| AGGCATGACAAATTTACAAA+GGG | 0.543731 | 8_2:+16728597 | Msa1237350:CDS |
| GATTCGTCCGTGACTTGTGT+TGG | 0.550678 | 8_2:+16728043 | Msa1237350:intron |
| GGTTGTACCTAATGGGTTGG+AGG | 0.552038 | 8_2:-16728202 | None:intergenic |
| TCTTGATAAAATAATTTGAG+AGG | 0.555864 | 8_2:+16729072 | Msa1237350:three_prime_UTR |
| GGTGAAGCTTAATGTGTCAC+CGG | 0.558827 | 8_2:+16728749 | Msa1237350:CDS |
| GTGCTTACACTTGTAAACTC+TGG | 0.560597 | 8_2:-16726119 | None:intergenic |
| GTGAAGCTTAATGTGTCACC+GGG | 0.563590 | 8_2:+16728750 | Msa1237350:CDS |
| TAAGGTTGTACCTAATGGGT+TGG | 0.564708 | 8_2:-16728205 | None:intergenic |
| GCTTCAATTTGCACTCCAGA+AGG | 0.564795 | 8_2:+16726047 | Msa1237350:CDS |
| TGATGAGTGGAGGGGCAACA+GGG | 0.568770 | 8_2:+16726333 | Msa1237350:CDS |
| ACCGTATATTGATGAGTGGA+GGG | 0.569539 | 8_2:+16726324 | Msa1237350:CDS |
| TAATTTACTCCATATTCATG+TGG | 0.571162 | 8_2:-16729018 | None:intergenic |
| AACCGTATATTGATGAGTGG+AGG | 0.572345 | 8_2:+16726323 | Msa1237350:CDS |
| TTGGCATGTTATTATCAATG+AGG | 0.573325 | 8_2:+16728728 | Msa1237350:CDS |
| CTATCCCAACCCTAAAACCA+GGG | 0.576951 | 8_2:-16728419 | None:intergenic |
| CGGTGGAAATTGCATTGCAA+AGG | 0.577450 | 8_2:+16728838 | Msa1237350:CDS |
| AAATGATGTGAATGAGATCA+AGG | 0.578893 | 8_2:-16728371 | None:intergenic |
| ATTCATGTGGCTCGAACAAG+TGG | 0.579438 | 8_2:-16729005 | None:intergenic |
| AGAAAGAAAGAAAATTCCAT+AGG | 0.581526 | 8_2:-16729047 | None:intergenic |
| TTGGAGCTATCACAATGGAC+AGG | 0.589745 | 8_2:-16728087 | None:intergenic |
| ACTATCCCAACCCTAAAACC+AGG | 0.592159 | 8_2:-16728420 | None:intergenic |
| AATGATCAAGTGGTGAATTG+TGG | 0.596988 | 8_2:+16728453 | Msa1237350:CDS |
| AAGGCATGACAAATTTACAA+AGG | 0.599045 | 8_2:+16728596 | Msa1237350:CDS |
| ATTTACAAAGGGACTCGAAG+AGG | 0.604697 | 8_2:+16728608 | Msa1237350:CDS |
| TAGTCGATTTCCAAGTAATG+CGG | 0.607200 | 8_2:+16728638 | Msa1237350:CDS |
| TTATTCATACAATGATCAAG+TGG | 0.611105 | 8_2:+16728443 | Msa1237350:CDS |
| TAGTTCTCCAACACAAGTCA+CGG | 0.615746 | 8_2:-16728050 | None:intergenic |
| CCTCAGGGTGTAATTCAGAT+GGG | 0.625600 | 8_2:+16725795 | Msa1237350:CDS |
| GATGAGTGGAGGGGCAACAG+GGG | 0.627412 | 8_2:+16726334 | Msa1237350:CDS |
| CTATATTAAACATGAGTTTG+GGG | 0.629964 | 8_2:+16725655 | Msa1237350:exon |
| ATCAAGTGGTGAATTGTGGA+AGG | 0.630178 | 8_2:+16728457 | Msa1237350:CDS |
| ATGGATAAAGAATAATCCCA+AGG | 0.631217 | 8_2:+16726025 | Msa1237350:CDS |
| GCTCGAACAAGTGGTGAATG+AGG | 0.631372 | 8_2:-16728996 | None:intergenic |
| CCTAACCGTATATTGATGAG+TGG | 0.638816 | 8_2:+16726320 | Msa1237350:CDS |
| TTGTACCTAATGGGTTGGAG+GGG | 0.640699 | 8_2:-16728200 | None:intergenic |
| AGAAAGTTGAAGTCAAACGT+TGG | 0.643437 | 8_2:+16728892 | Msa1237350:CDS |
| TACCCTGGATAGAAAGGGGT+AGG | 0.644778 | 8_2:-16726410 | None:intergenic |
| TTTATGTCAAAAGTGAGAGG+TGG | 0.645613 | 8_2:+16726281 | Msa1237350:CDS |
| GATATGATTATGTGATTGTG+AGG | 0.657848 | 8_2:-16728972 | None:intergenic |
| AAATTTATGTCAAAAGTGAG+AGG | 0.659568 | 8_2:+16726278 | Msa1237350:CDS |
| TGCATACCCTGGATAGAAAG+GGG | 0.660965 | 8_2:-16726414 | None:intergenic |
| TGATGAAATCTATGCAGCCA+CGG | 0.662191 | 8_2:+16728290 | Msa1237350:CDS |
| AACACTTACATAGCTTGGCG+AGG | 0.665335 | 8_2:-16728319 | None:intergenic |
| CCGTATATTGATGAGTGGAG+GGG | 0.666921 | 8_2:+16726325 | Msa1237350:CDS |
| GTCTTAGCTTCACTTCAAGG+AGG | 0.672185 | 8_2:+16728928 | Msa1237350:CDS |
| CCCATCTGAATTACACCCTG+AGG | 0.694079 | 8_2:-16725795 | None:intergenic |
| GAGCAATTAAAAGAAGACCC+CGG | 0.703258 | 8_2:-16728768 | None:intergenic |
| ATTGCAACCAATGACCAACA+TGG | 0.703855 | 8_2:+16725705 | Msa1237350:CDS |
| AGTTGTTGGAGCTATCACAA+TGG | 0.715860 | 8_2:-16728092 | None:intergenic |
| GCTTGGCGAGGTGAAAACCG+TGG | 0.728173 | 8_2:-16728307 | None:intergenic |
| TAATATTGATGATGAAACGG+TGG | 0.738048 | 8_2:+16728821 | Msa1237350:CDS |
| TGAAGCTTAATGTGTCACCG+GGG | 0.797341 | 8_2:+16728751 | Msa1237350:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAGGTATAAAAAATAATTA+AGG | - | chr8_2:16725628-16725647 | None:intergenic | 10.0% |
| !! | TAATAAACTAATATAATGAT+TGG | + | chr8_2:16726187-16726206 | Msa1237350:intron | 10.0% |
| !! | AATAAACTAATATAATGATT+GGG | + | chr8_2:16726188-16726207 | Msa1237350:intron | 10.0% |
| !! | ATAATAAATTATGAAAGAAA+AGG | - | chr8_2:16726444-16726463 | None:intergenic | 10.0% |
| !!! | GTTTAATATAGTTTTGTTAA+AGG | - | chr8_2:16725646-16725665 | None:intergenic | 15.0% |
| !! | TTATATTCTTTGTATAAAGT+TGG | - | chr8_2:16726925-16726944 | None:intergenic | 15.0% |
| !!! | ATCAAATGAATAATTTTGAT+TGG | - | chr8_2:16727018-16727037 | None:intergenic | 15.0% |
| !!! | TGATTTTGTTTTTCAAATTA+CGG | - | chr8_2:16727237-16727256 | None:intergenic | 15.0% |
| !! | ATTTGAAAAACAAAATCATA+AGG | + | chr8_2:16727239-16727258 | Msa1237350:intron | 15.0% |
| !! | AAAAAAAAAATCATATGATG+AGG | - | chr8_2:16727863-16727882 | None:intergenic | 15.0% |
| !! | AACTATATTAAACATGAGTT+TGG | + | chr8_2:16725653-16725672 | Msa1237350:exon | 20.0% |
| !! | ACTATATTAAACATGAGTTT+GGG | + | chr8_2:16725654-16725673 | Msa1237350:exon | 20.0% |
| !!! | AAAATTCTCCATATTTTGAT+GGG | + | chr8_2:16725730-16725749 | Msa1237350:CDS | 20.0% |
| !! | GAAAATCAGGTATATATATA+TGG | + | chr8_2:16725825-16725844 | Msa1237350:intron | 20.0% |
| !!! | TTGGGTATATTTTTGTATAT+TGG | + | chr8_2:16726206-16726225 | Msa1237350:intron | 20.0% |
| !!! | TTGATTATATATTGTTTCTC+AGG | + | chr8_2:16726247-16726266 | Msa1237350:intron | 20.0% |
| !!! | ATGTTCATTTTAAATGCTAT+TGG | - | chr8_2:16726850-16726869 | None:intergenic | 20.0% |
| !! | AAGAAAGGAATATATCATAA+AGG | + | chr8_2:16727340-16727359 | Msa1237350:intron | 20.0% |
| !! | TATAGTTTATCAAAAGACTT+AGG | + | chr8_2:16728393-16728412 | Msa1237350:CDS | 20.0% |
| !! | ATAGTTTATCAAAAGACTTA+GGG | + | chr8_2:16728394-16728413 | Msa1237350:CDS | 20.0% |
| !!! | AAAGGATAAGAGTATTTATA+GGG | + | chr8_2:16728856-16728875 | Msa1237350:CDS | 20.0% |
| !! | TCTTGATAAAATAATTTGAG+AGG | + | chr8_2:16729072-16729091 | Msa1237350:three_prime_UTR | 20.0% |
| !! | CTTGATAAAATAATTTGAGA+GGG | + | chr8_2:16729073-16729092 | Msa1237350:three_prime_UTR | 20.0% |
| ! | CTATATTAAACATGAGTTTG+GGG | + | chr8_2:16725655-16725674 | Msa1237350:exon | 25.0% |
| !!! | GAAAATTCTCCATATTTTGA+TGG | + | chr8_2:16725729-16725748 | Msa1237350:CDS | 25.0% |
| ! | GAGTTACACTCAATAAAATT+TGG | - | chr8_2:16725917-16725936 | None:intergenic | 25.0% |
| ! | AAATTTATGTCAAAAGTGAG+AGG | + | chr8_2:16726278-16726297 | Msa1237350:CDS | 25.0% |
| ! | CTCAAAAATGAAGAATCATA+GGG | - | chr8_2:16726797-16726816 | None:intergenic | 25.0% |
| ! | ACTCAAAAATGAAGAATCAT+AGG | - | chr8_2:16726798-16726817 | None:intergenic | 25.0% |
| ! | ATAACTATTCCATCAACAAA+AGG | + | chr8_2:16726941-16726960 | Msa1237350:intron | 25.0% |
| ! | CTGAGATAGAAATATATAGA+GGG | + | chr8_2:16727277-16727296 | Msa1237350:intron | 25.0% |
| ! | AACCATAAACATATTTGTGT+AGG | + | chr8_2:16727400-16727419 | Msa1237350:intron | 25.0% |
| ! | ACCATAAACATATTTGTGTA+GGG | + | chr8_2:16727401-16727420 | Msa1237350:intron | 25.0% |
| ! | AAATATGTCACACAAATGAA+AGG | - | chr8_2:16727668-16727687 | None:intergenic | 25.0% |
| !!! | CATTTGTGTGACATATTTTT+TGG | + | chr8_2:16727670-16727689 | Msa1237350:intron | 25.0% |
| ! | AAGACAACATCAATGTAAAA+GGG | + | chr8_2:16728163-16728182 | Msa1237350:CDS | 25.0% |
| ! | AGATTTCATCACAAACTAAA+TGG | - | chr8_2:16728281-16728300 | None:intergenic | 25.0% |
| ! | TTATTCATACAATGATCAAG+TGG | + | chr8_2:16728443-16728462 | Msa1237350:CDS | 25.0% |
| ! | GAACTTGAAAAAATTGCTTA+AGG | + | chr8_2:16728677-16728696 | Msa1237350:CDS | 25.0% |
| !!! | TGCTAATATTGATGATGAAA+CGG | + | chr8_2:16728818-16728837 | Msa1237350:CDS | 25.0% |
| !!! | CAAAGGATAAGAGTATTTAT+AGG | + | chr8_2:16728855-16728874 | Msa1237350:CDS | 25.0% |
| ! | TAATTTACTCCATATTCATG+TGG | - | chr8_2:16729021-16729040 | None:intergenic | 25.0% |
| ! | AGAAAGAAAGAAAATTCCAT+AGG | - | chr8_2:16729050-16729069 | None:intergenic | 25.0% |
| !!! | TTTTATTTTTCTTCCTAGTG+AGG | + | chr8_2:16729132-16729151 | Msa1237350:three_prime_UTR | 25.0% |
| CAATATATTGATGCCACAAT+GGG | + | chr8_2:16725866-16725885 | Msa1237350:intron | 30.0% | |
| AAAAAAACTACATCCCATTG+TGG | - | chr8_2:16725882-16725901 | None:intergenic | 30.0% | |
| !!! | GTTTATTTTGTGCTCAGTAT+TGG | + | chr8_2:16725944-16725963 | Msa1237350:intron | 30.0% |
| ATGGATAAAGAATAATCCCA+AGG | + | chr8_2:16726025-16726044 | Msa1237350:CDS | 30.0% | |
| CTAACTTTCAAGACTATCAT+GGG | + | chr8_2:16726093-16726112 | Msa1237350:CDS | 30.0% | |
| ! | ATATATTGTTTCTCAGGCTA+TGG | + | chr8_2:16726253-16726272 | Msa1237350:intron | 30.0% |
| ! | CGAATTAATCATGTTTTGCT+TGG | + | chr8_2:16726361-16726380 | Msa1237350:CDS | 30.0% |
| GCATGCATATACAATGAATA+AGG | - | chr8_2:16726469-16726488 | None:intergenic | 30.0% | |
| TGCAATTACCACATAAATGT+GGG | - | chr8_2:16726822-16726841 | None:intergenic | 30.0% | |
| ACATTTATGTGGTAATTGCA+CGG | + | chr8_2:16726822-16726841 | Msa1237350:intron | 30.0% | |
| TTCTACTCATCTATTGTTGA+TGG | + | chr8_2:16727088-16727107 | Msa1237350:intron | 30.0% | |
| TCTACTCATCTATTGTTGAT+GGG | + | chr8_2:16727089-16727108 | Msa1237350:intron | 30.0% | |
| !! | GTTTTTCAAATTACGGTCAA+TGG | - | chr8_2:16727230-16727249 | None:intergenic | 30.0% |
| CAAAATCATAAGGACAATAG+AGG | + | chr8_2:16727249-16727268 | Msa1237350:intron | 30.0% | |
| GCTGAGATAGAAATATATAG+AGG | + | chr8_2:16727276-16727295 | Msa1237350:intron | 30.0% | |
| CTATTGATGTATCGTAAGAA+AGG | + | chr8_2:16727325-16727344 | Msa1237350:intron | 30.0% | |
| ACCCTACACAAATATGTTTA+TGG | - | chr8_2:16727405-16727424 | None:intergenic | 30.0% | |
| ! | CTCATTTTCTCGTTTATACA+AGG | - | chr8_2:16727430-16727449 | None:intergenic | 30.0% |
| GAAAATGAGCAAGAAAAGTA+AGG | + | chr8_2:16727441-16727460 | Msa1237350:intron | 30.0% | |
| ! | TATTTTCCATGAGAGAATGT+TGG | + | chr8_2:16727708-16727727 | Msa1237350:intron | 30.0% |
| ! | TCATATGATGAGGCTTTTTA+GGG | - | chr8_2:16727853-16727872 | None:intergenic | 30.0% |
| ! | ATCATATGATGAGGCTTTTT+AGG | - | chr8_2:16727854-16727873 | None:intergenic | 30.0% |
| ! | TCTTGTTATCTTGAAGTTGT+TGG | - | chr8_2:16728109-16728128 | None:intergenic | 30.0% |
| GAAGACAACATCAATGTAAA+AGG | + | chr8_2:16728162-16728181 | Msa1237350:CDS | 30.0% | |
| AAATGATGTGAATGAGATCA+AGG | - | chr8_2:16728374-16728393 | None:intergenic | 30.0% | |
| !! | CTGATGAAAAATTTGTTGAC+AGG | + | chr8_2:16728541-16728560 | Msa1237350:CDS | 30.0% |
| AAGGCATGACAAATTTACAA+AGG | + | chr8_2:16728596-16728615 | Msa1237350:CDS | 30.0% | |
| AGGCATGACAAATTTACAAA+GGG | + | chr8_2:16728597-16728616 | Msa1237350:CDS | 30.0% | |
| CTTGAAAAAATTGCTTAAGG+AGG | + | chr8_2:16728680-16728699 | Msa1237350:CDS | 30.0% | |
| TTGGCATGTTATTATCAATG+AGG | + | chr8_2:16728728-16728747 | Msa1237350:CDS | 30.0% | |
| !! | TAATATTGATGATGAAACGG+TGG | + | chr8_2:16728821-16728840 | Msa1237350:CDS | 30.0% |
| GTGAAGCTAAGACTTAAATT+TGG | - | chr8_2:16728921-16728940 | None:intergenic | 30.0% | |
| GATATGATTATGTGATTGTG+AGG | - | chr8_2:16728975-16728994 | None:intergenic | 30.0% | |
| GAGTAAATTAGAATGTCCTA+TGG | + | chr8_2:16729031-16729050 | Msa1237350:three_prime_UTR | 30.0% | |
| ! | ATTTTCACCATGTTGGTCAT+TGG | - | chr8_2:16725715-16725734 | None:intergenic | 35.0% |
| ! | ATGGAGAATTTTCACCATGT+TGG | - | chr8_2:16725722-16725741 | None:intergenic | 35.0% |
| !!! | ATTCTCCATATTTTGATGGG+TGG | + | chr8_2:16725733-16725752 | Msa1237350:CDS | 35.0% |
| !!! | GGATTTTTTTTAGGGTGGAA+TGG | - | chr8_2:16725777-16725796 | None:intergenic | 35.0% |
| CACCCTAAAAAAAATCCTCA+GGG | + | chr8_2:16725780-16725799 | Msa1237350:CDS | 35.0% | |
| !!! | CACCCTGAGGATTTTTTTTA+GGG | - | chr8_2:16725785-16725804 | None:intergenic | 35.0% |
| !!! | ACACCCTGAGGATTTTTTTT+AGG | - | chr8_2:16725786-16725805 | None:intergenic | 35.0% |
| CCATTGTGGCATCAATATAT+TGG | - | chr8_2:16725868-16725887 | None:intergenic | 35.0% | |
| CCAATATATTGATGCCACAA+TGG | + | chr8_2:16725865-16725884 | Msa1237350:intron | 35.0% | |
| GCTTTGATCTGATTGAAGAA+TGG | + | chr8_2:16726006-16726025 | Msa1237350:CDS | 35.0% | |
| GCTAACTTTCAAGACTATCA+TGG | + | chr8_2:16726092-16726111 | Msa1237350:CDS | 35.0% | |
| TTTATGTCAAAAGTGAGAGG+TGG | + | chr8_2:16726281-16726300 | Msa1237350:CDS | 35.0% | |
| TGTATGCAACCAAATTCAGA+TGG | - | chr8_2:16726569-16726588 | None:intergenic | 35.0% | |
| TTGGTTGCATACATGTCAAA+TGG | + | chr8_2:16726576-16726595 | Msa1237350:intron | 35.0% | |
| TGGTTGCATACATGTCAAAT+GGG | + | chr8_2:16726577-16726596 | Msa1237350:intron | 35.0% | |
| GTGGACAGAATTAACTTCAT+AGG | - | chr8_2:16726751-16726770 | None:intergenic | 35.0% | |
| GCAATTACCACATAAATGTG+GGG | - | chr8_2:16726821-16726840 | None:intergenic | 35.0% | |
| GTGCAATTACCACATAAATG+TGG | - | chr8_2:16726823-16726842 | None:intergenic | 35.0% | |
| ACTATTCCATCAACAAAAGG+TGG | + | chr8_2:16726944-16726963 | Msa1237350:intron | 35.0% | |
| ! | GTCATGAGGTAGTCTATTTT+GGG | - | chr8_2:16727181-16727200 | None:intergenic | 35.0% |
| ! | AGTCATGAGGTAGTCTATTT+TGG | - | chr8_2:16727182-16727201 | None:intergenic | 35.0% |
| AAGTGATATATGAGAGAGTG+TGG | + | chr8_2:16727368-16727387 | Msa1237350:intron | 35.0% | |
| GCCATAAAACATTGATCCAA+CGG | - | chr8_2:16727580-16727599 | None:intergenic | 35.0% | |
| ATTCATCCAACATTCTCTCA+TGG | - | chr8_2:16727717-16727736 | None:intergenic | 35.0% | |
| ! | GCTTGGCTGACATTAATTTT+TGG | - | chr8_2:16727800-16727819 | None:intergenic | 35.0% |
| ! | TGTCTAAGGTTGTACCTAAT+GGG | - | chr8_2:16728212-16728231 | None:intergenic | 35.0% |
| ! | TTGTCTAAGGTTGTACCTAA+TGG | - | chr8_2:16728213-16728232 | None:intergenic | 35.0% |
| CTTTAGTGTCTCTTTGTCTA+AGG | - | chr8_2:16728226-16728245 | None:intergenic | 35.0% | |
| TCACTAACACTTACATAGCT+TGG | - | chr8_2:16728327-16728346 | None:intergenic | 35.0% | |
| AATGATCAAGTGGTGAATTG+TGG | + | chr8_2:16728453-16728472 | Msa1237350:CDS | 35.0% | |
| !! | TTCTTTTAGAGAGTTCGAGA+AGG | + | chr8_2:16728565-16728584 | Msa1237350:CDS | 35.0% |
| GTTCGAGAAGGTTGTTAAAA+AGG | + | chr8_2:16728577-16728596 | Msa1237350:CDS | 35.0% | |
| ! | TAGTCGATTTCCAAGTAATG+CGG | + | chr8_2:16728638-16728657 | Msa1237350:CDS | 35.0% |
| TTGAAGAAGAGTTGAAGCTT+TGG | + | chr8_2:16728709-16728728 | Msa1237350:CDS | 35.0% | |
| !! | GTCTTCTTTTAATTGCTCTG+AGG | + | chr8_2:16728773-16728792 | Msa1237350:CDS | 35.0% |
| !!! | TCTTTTAATTGCTCTGAGGT+TGG | + | chr8_2:16728777-16728796 | Msa1237350:CDS | 35.0% |
| AGAAAGTTGAAGTCAAACGT+TGG | + | chr8_2:16728892-16728911 | Msa1237350:CDS | 35.0% | |
| TAAGTCTTAGCTTCACTTCA+AGG | + | chr8_2:16728925-16728944 | Msa1237350:CDS | 35.0% | |
| ACTATCGAAAAAACCTCACT+AGG | - | chr8_2:16729148-16729167 | None:intergenic | 35.0% | |
| ! | AGCTAATTTGTGTGTGAAGT+AGG | + | chr8_2:16729217-16729236 | Msa1237350:three_prime_UTR | 35.0% |
| ! | TTGGTCATTGGTTGCAATCT+TGG | - | chr8_2:16725703-16725722 | None:intergenic | 40.0% |
| ATTGCAACCAATGACCAACA+TGG | + | chr8_2:16725705-16725724 | Msa1237350:CDS | 40.0% | |
| GCTTTCCACCCATCAAAATA+TGG | - | chr8_2:16725741-16725760 | None:intergenic | 40.0% | |
| !!! | CCTGAGGATTTTTTTTAGGG+TGG | - | chr8_2:16725782-16725801 | None:intergenic | 40.0% |
| CCACCCTAAAAAAAATCCTC+AGG | + | chr8_2:16725779-16725798 | Msa1237350:CDS | 40.0% | |
| ! | AGAAGGAGTGTGTAAGTTCA+GGG | + | chr8_2:16726064-16726083 | Msa1237350:CDS | 40.0% |
| GTGCTTACACTTGTAAACTC+TGG | - | chr8_2:16726122-16726141 | None:intergenic | 40.0% | |
| CCACTCATCAATATACGGTT+AGG | - | chr8_2:16726323-16726342 | None:intergenic | 40.0% | |
| CCTAACCGTATATTGATGAG+TGG | + | chr8_2:16726320-16726339 | Msa1237350:CDS | 40.0% | |
| AACCGTATATTGATGAGTGG+AGG | + | chr8_2:16726323-16726342 | Msa1237350:CDS | 40.0% | |
| ACCGTATATTGATGAGTGGA+GGG | + | chr8_2:16726324-16726343 | Msa1237350:CDS | 40.0% | |
| ATGCATACCCTGGATAGAAA+GGG | - | chr8_2:16726418-16726437 | None:intergenic | 40.0% | |
| GTGATAAAATCTATGTGCCG+TGG | + | chr8_2:16726541-16726560 | Msa1237350:intron | 40.0% | |
| TTTGAGTCCCCACATTTATG+TGG | + | chr8_2:16726811-16726830 | Msa1237350:intron | 40.0% | |
| ACACGACTCAGACATAAGTT+AGG | + | chr8_2:16726880-16726899 | Msa1237350:intron | 40.0% | |
| ! | GAAACTCCACCTTTTGTTGA+TGG | - | chr8_2:16726953-16726972 | None:intergenic | 40.0% |
| AAGAAAAGTAAGGAACGCGA+CGG | + | chr8_2:16727451-16727470 | Msa1237350:intron | 40.0% | |
| ! | GCCGTTGGATCAATGTTTTA+TGG | + | chr8_2:16727576-16727595 | Msa1237350:intron | 40.0% |
| CACAAATGAAAGGACCTGAA+AGG | - | chr8_2:16727658-16727677 | None:intergenic | 40.0% | |
| GTTTCGGAAAGTGATTGAGT+TGG | + | chr8_2:16727822-16727841 | Msa1237350:intron | 40.0% | |
| TAGTTCTCCAACACAAGTCA+CGG | - | chr8_2:16728053-16728072 | None:intergenic | 40.0% | |
| ! | TGACTTGTGTTGGAGAACTA+AGG | + | chr8_2:16728053-16728072 | Msa1237350:CDS | 40.0% |
| AGTTGTTGGAGCTATCACAA+TGG | - | chr8_2:16728095-16728114 | None:intergenic | 40.0% | |
| ! | TAAGGTTGTACCTAATGGGT+TGG | - | chr8_2:16728208-16728227 | None:intergenic | 40.0% |
| TGATGAAATCTATGCAGCCA+CGG | + | chr8_2:16728290-16728309 | Msa1237350:CDS | 40.0% | |
| ATCAAGTGGTGAATTGTGGA+AGG | + | chr8_2:16728457-16728476 | Msa1237350:CDS | 40.0% | |
| GGAAGGAAAATGTCAAGCTT+TGG | + | chr8_2:16728474-16728493 | Msa1237350:CDS | 40.0% | |
| ATTTACAAAGGGACTCGAAG+AGG | + | chr8_2:16728608-16728627 | Msa1237350:CDS | 40.0% | |
| ! | AGTCGATTTCCAAGTAATGC+GGG | + | chr8_2:16728639-16728658 | Msa1237350:CDS | 40.0% |
| CAAAAAAGTCCCGCATTACT+TGG | - | chr8_2:16728651-16728670 | None:intergenic | 40.0% | |
| !!! | GTAATGCGGGACTTTTTTGT+TGG | + | chr8_2:16728652-16728671 | Msa1237350:CDS | 40.0% |
| GAGCAATTAAAAGAAGACCC+CGG | - | chr8_2:16728771-16728790 | None:intergenic | 40.0% | |
| !! | TTAATTGCTCTGAGGTTGGT+TGG | + | chr8_2:16728781-16728800 | Msa1237350:CDS | 40.0% |
| TTGTTCGAGCCACATGAATA+TGG | + | chr8_2:16729009-16729028 | Msa1237350:exon | 40.0% | |
| TCACAAATAGCTAGCTAGCT+AGG | - | chr8_2:16729112-16729131 | None:intergenic | 40.0% | |
| ! | TCGATAGTGTTCTAGCTACA+AGG | + | chr8_2:16729160-16729179 | Msa1237350:three_prime_UTR | 40.0% |
| CTACAAGGATCTTTGTGTGT+AGG | + | chr8_2:16729175-16729194 | Msa1237350:three_prime_UTR | 40.0% | |
| TCCTCAGGGTGTAATTCAGA+TGG | + | chr8_2:16725794-16725813 | Msa1237350:CDS | 45.0% | |
| CCTCAGGGTGTAATTCAGAT+GGG | + | chr8_2:16725795-16725814 | Msa1237350:CDS | 45.0% | |
| GATGGGTCTTGCTGAAAATC+AGG | + | chr8_2:16725812-16725831 | Msa1237350:CDS | 45.0% | |
| GGAGTGCAAATTGAAGCCTT+GGG | - | chr8_2:16726044-16726063 | None:intergenic | 45.0% | |
| TGGAGTGCAAATTGAAGCCT+TGG | - | chr8_2:16726045-16726064 | None:intergenic | 45.0% | |
| GCTTCAATTTGCACTCCAGA+AGG | + | chr8_2:16726047-16726066 | Msa1237350:CDS | 45.0% | |
| CTGAACTTACACACTCCTTC+TGG | - | chr8_2:16726065-16726084 | None:intergenic | 45.0% | |
| ! | CAGAAGGAGTGTGTAAGTTC+AGG | + | chr8_2:16726063-16726082 | Msa1237350:CDS | 45.0% |
| TGTCAAAAGTGAGAGGTGGT+AGG | + | chr8_2:16726285-16726304 | Msa1237350:CDS | 45.0% | |
| GTCAAAAGTGAGAGGTGGTA+GGG | + | chr8_2:16726286-16726305 | Msa1237350:CDS | 45.0% | |
| CCCCTCCACTCATCAATATA+CGG | - | chr8_2:16726328-16726347 | None:intergenic | 45.0% | |
| CCGTATATTGATGAGTGGAG+GGG | + | chr8_2:16726325-16726344 | Msa1237350:CDS | 45.0% | |
| ! | ATGTTTTGCTTGGCTGATCC+AGG | + | chr8_2:16726371-16726390 | Msa1237350:CDS | 45.0% |
| !! | GGAACTAGAAAAGCATCTCC+TGG | - | chr8_2:16726392-16726411 | None:intergenic | 45.0% |
| TTCCTACCCCTTTCTATCCA+GGG | + | chr8_2:16726408-16726427 | Msa1237350:CDS | 45.0% | |
| TGCATACCCTGGATAGAAAG+GGG | - | chr8_2:16726417-16726436 | None:intergenic | 45.0% | |
| CATGCATACCCTGGATAGAA+AGG | - | chr8_2:16726419-16726438 | None:intergenic | 45.0% | |
| ! | GAAAAGGTACATGCATACCC+TGG | - | chr8_2:16726428-16726447 | None:intergenic | 45.0% |
| ! | ACCAAATTCAGATGGTGCCA+CGG | - | chr8_2:16726561-16726580 | None:intergenic | 45.0% |
| CTACCTCATGACTCATAGCT+TGG | + | chr8_2:16727189-16727208 | Msa1237350:intron | 45.0% | |
| AGATTTCCTGCTGTAACAGC+AGG | + | chr8_2:16727486-16727505 | Msa1237350:intron | 45.0% | |
| TGTAACAGCAGGATGCTGTA+AGG | + | chr8_2:16727497-16727516 | Msa1237350:intron | 45.0% | |
| TGTAAGGCGTGTGAGATAAG+TGG | + | chr8_2:16727513-16727532 | Msa1237350:intron | 45.0% | |
| GTAGAACAAATCTGAGCCGT+TGG | + | chr8_2:16727561-16727580 | Msa1237350:intron | 45.0% | |
| ! | CAACACGTTGTTTCACGTTG+TGG | - | chr8_2:16727612-16727631 | None:intergenic | 45.0% |
| !! | TCGGAAAGTGATTGAGTTGG+TGG | + | chr8_2:16727825-16727844 | Msa1237350:intron | 45.0% |
| TTGGAGCTATCACAATGGAC+AGG | - | chr8_2:16728090-16728109 | None:intergenic | 45.0% | |
| !! | TTGTACCTAATGGGTTGGAG+GGG | - | chr8_2:16728203-16728222 | None:intergenic | 45.0% |
| !! | GTTGTACCTAATGGGTTGGA+GGG | - | chr8_2:16728204-16728223 | None:intergenic | 45.0% |
| AACACTTACATAGCTTGGCG+AGG | - | chr8_2:16728322-16728341 | None:intergenic | 45.0% | |
| TCAAAAGACTTAGGGTTCCC+TGG | + | chr8_2:16728402-16728421 | Msa1237350:CDS | 45.0% | |
| !! | ACTTAGGGTTCCCTGGTTTT+AGG | + | chr8_2:16728409-16728428 | Msa1237350:CDS | 45.0% |
| !!! | CTTAGGGTTCCCTGGTTTTA+GGG | + | chr8_2:16728410-16728429 | Msa1237350:CDS | 45.0% |
| CTATCCCAACCCTAAAACCA+GGG | - | chr8_2:16728422-16728441 | None:intergenic | 45.0% | |
| ACTATCCCAACCCTAAAACC+AGG | - | chr8_2:16728423-16728442 | None:intergenic | 45.0% | |
| GGTGAAGCTTAATGTGTCAC+CGG | + | chr8_2:16728749-16728768 | Msa1237350:CDS | 45.0% | |
| GTGAAGCTTAATGTGTCACC+GGG | + | chr8_2:16728750-16728769 | Msa1237350:CDS | 45.0% | |
| TGAAGCTTAATGTGTCACCG+GGG | + | chr8_2:16728751-16728770 | Msa1237350:CDS | 45.0% | |
| !! | CTCTGAGGTTGGTTGGTTTA+GGG | + | chr8_2:16728788-16728807 | Msa1237350:CDS | 45.0% |
| CGGTGGAAATTGCATTGCAA+AGG | + | chr8_2:16728838-16728857 | Msa1237350:CDS | 45.0% | |
| GTCTTAGCTTCACTTCAAGG+AGG | + | chr8_2:16728928-16728947 | Msa1237350:CDS | 45.0% | |
| ATTCATGTGGCTCGAACAAG+TGG | - | chr8_2:16729008-16729027 | None:intergenic | 45.0% | |
| CCCATCTGAATTACACCCTG+AGG | - | chr8_2:16725798-16725817 | None:intergenic | 50.0% | |
| GTTCCTACCCCTTTCTATCC+AGG | + | chr8_2:16726407-16726426 | Msa1237350:CDS | 50.0% | |
| TACCCTGGATAGAAAGGGGT+AGG | - | chr8_2:16726413-16726432 | None:intergenic | 50.0% | |
| TCCACCTCTCCATCTAAGTG+AGG | + | chr8_2:16726766-16726785 | Msa1237350:intron | 50.0% | |
| ACCTCACTTAGATGGAGAGG+TGG | - | chr8_2:16726770-16726789 | None:intergenic | 50.0% | |
| GACACCTCACTTAGATGGAG+AGG | - | chr8_2:16726773-16726792 | None:intergenic | 50.0% | |
| AGGGTGACACCTCACTTAGA+TGG | - | chr8_2:16726778-16726797 | None:intergenic | 50.0% | |
| CCACCAAGCTATGAGTCATG+AGG | - | chr8_2:16727195-16727214 | None:intergenic | 50.0% | |
| CCTCATGACTCATAGCTTGG+TGG | + | chr8_2:16727192-16727211 | Msa1237350:intron | 50.0% | |
| ! | TAAGGAACGCGACGGATTTC+AGG | + | chr8_2:16727459-16727478 | Msa1237350:intron | 50.0% |
| AACGTGTTGCAGCTACAGCA+GGG | + | chr8_2:16727623-16727642 | Msa1237350:intron | 50.0% | |
| TGAAAGGACCTGAAAGGACC+TGG | - | chr8_2:16727652-16727671 | None:intergenic | 50.0% | |
| AATGTCAGCCAAGCGCGTTT+CGG | + | chr8_2:16727806-16727825 | Msa1237350:intron | 50.0% | |
| ATCACTTTCCGAAACGCGCT+TGG | - | chr8_2:16727817-16727836 | None:intergenic | 50.0% | |
| ! | GATTCGTCCGTGACTTGTGT+TGG | + | chr8_2:16728043-16728062 | Msa1237350:intron | 50.0% |
| ACAAACCCCTCCAACCCATT+AGG | + | chr8_2:16728195-16728214 | Msa1237350:CDS | 50.0% | |
| !! | GGTTGTACCTAATGGGTTGG+AGG | - | chr8_2:16728205-16728224 | None:intergenic | 50.0% |
| !!! | GGTTCCCTGGTTTTAGGGTT+GGG | + | chr8_2:16728415-16728434 | Msa1237350:CDS | 50.0% |
| !! | GCTCTGAGGTTGGTTGGTTT+AGG | + | chr8_2:16728787-16728806 | Msa1237350:CDS | 50.0% |
| GCTCGAACAAGTGGTGAATG+AGG | - | chr8_2:16728999-16729018 | None:intergenic | 50.0% | |
| TTGATGAGTGGAGGGGCAAC+AGG | + | chr8_2:16726332-16726351 | Msa1237350:CDS | 55.0% | |
| TGATGAGTGGAGGGGCAACA+GGG | + | chr8_2:16726333-16726352 | Msa1237350:CDS | 55.0% | |
| GCCGTGGCACCATCTGAATT+TGG | + | chr8_2:16726557-16726576 | Msa1237350:intron | 55.0% | |
| CAGCATCCTGCTGTTACAGC+AGG | - | chr8_2:16727495-16727514 | None:intergenic | 55.0% | |
| CAACGTGTTGCAGCTACAGC+AGG | + | chr8_2:16727622-16727641 | Msa1237350:intron | 55.0% | |
| CAGGGAATCCAGGTCCTTTC+AGG | + | chr8_2:16727641-16727660 | Msa1237350:intron | 55.0% | |
| !!! | GGGTTCCCTGGTTTTAGGGT+TGG | + | chr8_2:16728414-16728433 | Msa1237350:CDS | 55.0% |
| GATGAGTGGAGGGGCAACAG+GGG | + | chr8_2:16726334-16726353 | Msa1237350:CDS | 60.0% | |
| GCAGCTACAGCAGGGAATCC+AGG | + | chr8_2:16727631-16727650 | Msa1237350:intron | 60.0% | |
| GCTTGGCGAGGTGAAAACCG+TGG | - | chr8_2:16728310-16728329 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 16725608 | 16729240 | 16725608 | ID=Msa1237350;Name=Msa1237350 |
| chr8_2 | mRNA | 16725608 | 16729240 | 16725608 | ID=Msa1237350-mRNA-1;Parent=Msa1237350;Name=Msa1237350-mRNA-1;_AED=0.09;_eAED=0.09;_QI=58|1|1|1|1|1|4|215|480 |
| chr8_2 | exon | 16725608 | 16725833 | 16725608 | ID=Msa1237350-mRNA-1:exon:6271;Parent=Msa1237350-mRNA-1 |
| chr8_2 | exon | 16726002 | 16726133 | 16726002 | ID=Msa1237350-mRNA-1:exon:6272;Parent=Msa1237350-mRNA-1 |
| chr8_2 | exon | 16726269 | 16726429 | 16726269 | ID=Msa1237350-mRNA-1:exon:6273;Parent=Msa1237350-mRNA-1 |
| chr8_2 | exon | 16728044 | 16729240 | 16728044 | ID=Msa1237350-mRNA-1:exon:6274;Parent=Msa1237350-mRNA-1 |
| chr8_2 | five_prime_UTR | 16725608 | 16725665 | 16725608 | ID=Msa1237350-mRNA-1:five_prime_utr;Parent=Msa1237350-mRNA-1 |
| chr8_2 | CDS | 16725666 | 16725833 | 16725666 | ID=Msa1237350-mRNA-1:cds;Parent=Msa1237350-mRNA-1 |
| chr8_2 | CDS | 16726002 | 16726133 | 16726002 | ID=Msa1237350-mRNA-1:cds;Parent=Msa1237350-mRNA-1 |
| chr8_2 | CDS | 16726269 | 16726429 | 16726269 | ID=Msa1237350-mRNA-1:cds;Parent=Msa1237350-mRNA-1 |
| chr8_2 | CDS | 16728044 | 16729025 | 16728044 | ID=Msa1237350-mRNA-1:cds;Parent=Msa1237350-mRNA-1 |
| chr8_2 | three_prime_UTR | 16729026 | 16729240 | 16729026 | ID=Msa1237350-mRNA-1:three_prime_utr;Parent=Msa1237350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
