Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1279160 | sp|F4JCU0|SUA_ARATH | 52.547 | 373 | 132 | 10 | 2 | 363 | 543 | 881 | 1.02e-89 | 293 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1279160 | A0A072TS93 | 96.505 | 372 | 13 | 0 | 2 | 373 | 470 | 841 | 0.0 | 733 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015130 | Msa1279160 | 0.806236 | 9.071487e-50 | -8.615850e-47 |
| Msa0218370 | Msa1279160 | 0.810753 | 9.855585e-51 | -8.615850e-47 |
| Msa1279160 | Msa1283800 | 0.810423 | 1.161513e-50 | -8.615850e-47 |
| Msa1279160 | Msa1384750 | 0.801986 | 6.951120e-49 | -8.615850e-47 |
| Msa0994030 | Msa1279160 | 0.803701 | 3.074549e-49 | -8.615850e-47 |
| Msa1160560 | Msa1279160 | 0.804424 | 2.174758e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1279160 | MtrunA17_Chr8g0369281 | 95.946 | 370 | 15 | 0 | 2 | 371 | 578 | 947 | 0.0 | 671 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1279160 | AT3G54230.3 | 52.547 | 373 | 132 | 10 | 2 | 363 | 263 | 601 | 2.70e-94 | 297 |
| Msa1279160 | AT3G54230.4 | 52.547 | 373 | 132 | 10 | 2 | 363 | 499 | 837 | 3.61e-91 | 294 |
| Msa1279160 | AT3G54230.5 | 52.547 | 373 | 132 | 10 | 2 | 363 | 543 | 881 | 1.04e-90 | 293 |
| Msa1279160 | AT3G54230.1 | 52.547 | 373 | 132 | 10 | 2 | 363 | 543 | 881 | 1.04e-90 | 293 |
| Msa1279160 | AT3G54230.2 | 52.547 | 373 | 132 | 10 | 2 | 363 | 544 | 882 | 1.40e-90 | 293 |
Find 163 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCATTCAACATGTAAAATT+AGG | 0.133707 | 8_3:+16009276 | None:intergenic |
| TATTACTATGATGCTACTTC+TGG | 0.149592 | 8_3:-16011151 | Msa1279160:CDS |
| TATTCTTGTTTCTTGTATTA+TGG | 0.159397 | 8_3:-16008662 | Msa1279160:three_prime_UTR |
| GATTTGGCTGACCTCGAAAT+TGG | 0.175606 | 8_3:-16009640 | Msa1279160:CDS |
| AAACAAGCACCCTATGAATT+TGG | 0.181072 | 8_3:-16008752 | Msa1279160:three_prime_UTR |
| GTCATCTGGATTGTATTCTT+TGG | 0.189922 | 8_3:+16011255 | None:intergenic |
| CACCACAATCAGGCTTTGTT+TGG | 0.201229 | 8_3:-16011189 | Msa1279160:CDS |
| AAAAGCACTTGCCAGGTTTC+GGG | 0.239384 | 8_3:-16008477 | Msa1279160:three_prime_UTR |
| TGGTTTGCTAACCTACTATT+TGG | 0.240471 | 8_3:+16009241 | None:intergenic |
| CCCGATCCCTGTAGGTTGTT+TGG | 0.257519 | 8_3:+16009710 | None:intergenic |
| GGGTGCTTGTTTGAAGAAAA+AGG | 0.260376 | 8_3:+16008763 | None:intergenic |
| AAATCAGATACTTCTTATTC+TGG | 0.262537 | 8_3:-16009919 | Msa1279160:CDS |
| CTTTACTATGATGGTAATAA+TGG | 0.263618 | 8_3:-16010540 | Msa1279160:CDS |
| GGAAATTAACGCGTCTAATC+CGG | 0.276551 | 8_3:-16010061 | Msa1279160:CDS |
| TCATCTGGATTGTATTCTTT+GGG | 0.283815 | 8_3:+16011256 | None:intergenic |
| ATTGCAAAACATGAATTAAA+TGG | 0.284292 | 8_3:+16008235 | None:intergenic |
| CCATTCAACATGTAAAATTA+GGG | 0.289785 | 8_3:+16009277 | None:intergenic |
| CCGATCCCTGTAGGTTGTTT+GGG | 0.326628 | 8_3:+16009711 | None:intergenic |
| TAACGAGTCTGAACCTTCTA+AGG | 0.336156 | 8_3:-16010442 | Msa1279160:CDS |
| CCATTAGATTGTTTGTCATC+TGG | 0.349030 | 8_3:+16011241 | None:intergenic |
| ATTTGGCTGACCTCGAAATT+GGG | 0.354604 | 8_3:-16009639 | Msa1279160:CDS |
| TTGGAGGTGTTACTGTTTAG+TGG | 0.355902 | 8_3:-16008892 | Msa1279160:three_prime_UTR |
| ATCTTCAGTTGGCAATGATT+TGG | 0.356718 | 8_3:-16009656 | Msa1279160:CDS |
| CTGGAGGACAATCCGTTATC+TGG | 0.366719 | 8_3:-16010156 | Msa1279160:CDS |
| TATACACCATCTGCGTCTAT+TGG | 0.369712 | 8_3:-16009793 | Msa1279160:CDS |
| GTTCTCCCATCCAAATTCAT+AGG | 0.371707 | 8_3:+16008742 | None:intergenic |
| GAGGTTTGAGCACATATTCT+AGG | 0.375879 | 8_3:-16008437 | Msa1279160:three_prime_UTR |
| ATTGAAGAAATCTCCGTGAT+TGG | 0.392514 | 8_3:-16009414 | Msa1279160:three_prime_UTR |
| ATGCAAAATCGCGAGCTTCA+AGG | 0.398316 | 8_3:+16009142 | None:intergenic |
| TTTACTATGATGGTAATAAT+GGG | 0.398600 | 8_3:-16010539 | Msa1279160:CDS |
| TAGCAAACCAATAGGTTTGC+TGG | 0.403337 | 8_3:-16009228 | Msa1279160:three_prime_UTR |
| ATTACTATGATGCTACTTCT+GGG | 0.406527 | 8_3:-16011150 | Msa1279160:CDS |
| TCCATGGCTTGTGTCTGTAC+AGG | 0.412462 | 8_3:+16008590 | None:intergenic |
| GAAGATGAAGCGGACATAGA+TGG | 0.414413 | 8_3:+16009880 | None:intergenic |
| ATGATGGTAATAATGGGATT+TGG | 0.415246 | 8_3:-16010533 | Msa1279160:CDS |
| GACCCTTCAGTAACAGCCTT+GGG | 0.418916 | 8_3:-16009987 | Msa1279160:CDS |
| TCTTTCTGCTTCAACTCATA+AGG | 0.419005 | 8_3:-16009740 | Msa1279160:CDS |
| GTTCTAAATATCCAAATAGT+AGG | 0.420201 | 8_3:-16009252 | Msa1279160:three_prime_UTR |
| CCTGCCTGCACCTCAAGGCT+AGG | 0.420512 | 8_3:+16008527 | None:intergenic |
| AAATGAGAAGCCAGCTTCAC+TGG | 0.420953 | 8_3:-16010358 | Msa1279160:CDS |
| ATTACACACAGAAAATTGTT+TGG | 0.422472 | 8_3:+16009387 | None:intergenic |
| GTTATTAGGGGCTCAGGAAG+AGG | 0.422975 | 8_3:-16009949 | Msa1279160:CDS |
| GCTGAGAGAAGAAATTTATA+TGG | 0.424036 | 8_3:-16009685 | Msa1279160:CDS |
| GAACCATCAGATGCCTTAGA+AGG | 0.426068 | 8_3:+16010429 | None:intergenic |
| TAGTAGGTTAGCAAACCAAT+AGG | 0.426559 | 8_3:-16009236 | Msa1279160:three_prime_UTR |
| TTCACTGGCAGATGCTGTCC+AGG | 0.429341 | 8_3:-16010343 | Msa1279160:CDS |
| GTACATAAACCTACAACTAT+AGG | 0.429953 | 8_3:+16009340 | None:intergenic |
| TTCCCTCCCGGGGTTGGTGG+AGG | 0.431146 | 8_3:-16009096 | Msa1279160:three_prime_UTR |
| CCATTCCCTCCCGGGGTTGG+TGG | 0.431457 | 8_3:-16009099 | Msa1279160:three_prime_UTR |
| CCAGATGACAAACAATCTAA+TGG | 0.432126 | 8_3:-16011241 | Msa1279160:CDS |
| CAGCAGCAGCTGCAGCTGCC+TGG | 0.433582 | 8_3:+16010325 | None:intergenic |
| ATGGGAGAACCTCAGACATT+TGG | 0.434058 | 8_3:-16008729 | Msa1279160:three_prime_UTR |
| ACAGCATCTGCCAGTGAAGC+TGG | 0.436486 | 8_3:+16010348 | None:intergenic |
| TACTTGAATCCCCAATTTCG+AGG | 0.437337 | 8_3:+16009629 | None:intergenic |
| ACCACAATCAGGCTTTGTTT+GGG | 0.440033 | 8_3:-16011188 | Msa1279160:CDS |
| TTTGTTTGGGACGAAGCATC+TGG | 0.440492 | 8_3:-16011175 | Msa1279160:CDS |
| TAAATTGATGCACAGGGGCT+AGG | 0.448070 | 8_3:-16008638 | Msa1279160:three_prime_UTR |
| AAATTTACCAGCAAACCTAT+TGG | 0.448637 | 8_3:+16009221 | None:intergenic |
| CCACCAACCCCGGGAGGGAA+TGG | 0.451819 | 8_3:+16009099 | None:intergenic |
| TTGAAGAAATCTCCGTGATT+GGG | 0.455158 | 8_3:-16009413 | Msa1279160:three_prime_UTR |
| GAAATTAACGCGTCTAATCC+GGG | 0.456267 | 8_3:-16010060 | Msa1279160:CDS |
| ATGAAAAGAATGTTGGTAAT+CGG | 0.461413 | 8_3:-16009011 | Msa1279160:three_prime_UTR |
| GTCCTACATTTCCCGAAACC+TGG | 0.464819 | 8_3:+16008466 | None:intergenic |
| ATGGGATGTACTGCTGAGTA+TGG | 0.465822 | 8_3:+16010496 | None:intergenic |
| CGCAACATGGGCTGGCAGGA+AGG | 0.466520 | 8_3:-16008982 | Msa1279160:three_prime_UTR |
| GATGTTGGTGCACCACAATC+AGG | 0.467104 | 8_3:-16011199 | Msa1279160:CDS |
| TTGTTTGGTGCCTGATGAAA+AGG | 0.470412 | 8_3:-16009501 | Msa1279160:three_prime_UTR |
| CATGGGCTGGCAGGAAGGCT+TGG | 0.471926 | 8_3:-16008977 | Msa1279160:three_prime_UTR |
| GCTTCGCAACATGGGCTGGC+AGG | 0.473121 | 8_3:-16008986 | Msa1279160:three_prime_UTR |
| CGCGCGTCCTCCACCAACCC+CGG | 0.474663 | 8_3:+16009089 | None:intergenic |
| TTCAAGCAAGGAAATGATCA+TGG | 0.476074 | 8_3:+16008279 | None:intergenic |
| GAAAGAGAAAGAAAGATCAA+AGG | 0.477323 | 8_3:-16010289 | Msa1279160:CDS |
| TTATGGATAAATTGATGCAC+AGG | 0.479795 | 8_3:-16008645 | Msa1279160:three_prime_UTR |
| TAAAACAGATGTCTCCTCCC+TGG | 0.483594 | 8_3:-16009821 | Msa1279160:CDS |
| GATACAATGCCATTCCCTCC+CGG | 0.487315 | 8_3:-16009108 | Msa1279160:three_prime_UTR |
| GGATGCTTCGCAACATGGGC+TGG | 0.487432 | 8_3:-16008990 | Msa1279160:three_prime_UTR |
| CATGTAGGTCTTTACTATGA+TGG | 0.488584 | 8_3:-16010549 | Msa1279160:intron |
| ATACAATGCCATTCCCTCCC+GGG | 0.488651 | 8_3:-16009107 | Msa1279160:three_prime_UTR |
| ATGCCATTCCCTCCCGGGGT+TGG | 0.491610 | 8_3:-16009102 | Msa1279160:three_prime_UTR |
| ACAAGCTACTCGTGTGGCAC+TGG | 0.493002 | 8_3:-16010175 | Msa1279160:CDS |
| AACAGTCCCAAACAACCTAC+AGG | 0.494685 | 8_3:-16009717 | Msa1279160:CDS |
| ACATCAGTACCAGGCTGCTC+AGG | 0.495909 | 8_3:+16011217 | None:intergenic |
| GTTGGTGGAGGACGCGCGGT+TGG | 0.497503 | 8_3:-16009084 | Msa1279160:three_prime_UTR |
| GCGAGCTTCAAGGACACAAT+TGG | 0.499649 | 8_3:+16009152 | None:intergenic |
| AGGTTTGAGCACATATTCTA+GGG | 0.501268 | 8_3:-16008436 | Msa1279160:three_prime_UTR |
| AAAACAGATGTCTCCTCCCT+GGG | 0.502567 | 8_3:-16009820 | Msa1279160:CDS |
| ACATGAATTAAATGGCAATC+CGG | 0.503596 | 8_3:+16008243 | None:intergenic |
| GAAATTTGAAATTCAAGTCA+TGG | 0.504859 | 8_3:+16008345 | None:intergenic |
| ATGGAAAATAGAGCAGGACT+TGG | 0.509313 | 8_3:-16008572 | Msa1279160:three_prime_UTR |
| TAATCGGATGCTTCGCAACA+TGG | 0.510666 | 8_3:-16008995 | Msa1279160:three_prime_UTR |
| CCAAACAACCTACAGGGATC+GGG | 0.512418 | 8_3:-16009710 | Msa1279160:CDS |
| GGTTGCCGCTACTGACTCTC+AGG | 0.516508 | 8_3:-16010019 | Msa1279160:CDS |
| TTATGAGTTGAAGCAGAAAG+AGG | 0.519434 | 8_3:+16009742 | None:intergenic |
| CCTAGCCTTGAGGTGCAGGC+AGG | 0.523875 | 8_3:-16008527 | Msa1279160:three_prime_UTR |
| ATTGTTTGGTTTCCCAATCA+CGG | 0.525700 | 8_3:+16009401 | None:intergenic |
| CCCAAACAACCTACAGGGAT+CGG | 0.525760 | 8_3:-16009711 | Msa1279160:CDS |
| CCATCTGCGTCTATTGGAAG+TGG | 0.530443 | 8_3:-16009787 | Msa1279160:CDS |
| GCGATTGATGAAAAGAATGT+TGG | 0.530566 | 8_3:-16009018 | Msa1279160:three_prime_UTR |
| GCGCGTCCTCCACCAACCCC+GGG | 0.532615 | 8_3:+16009090 | None:intergenic |
| AAGCACCCTATGAATTTGGA+TGG | 0.537342 | 8_3:-16008748 | Msa1279160:three_prime_UTR |
| GAGCAGCCTGGTACTGATGT+TGG | 0.542779 | 8_3:-16011214 | Msa1279160:CDS |
| TGTGCAGTTGTGTGACCTCC+CGG | 0.542822 | 8_3:+16010042 | None:intergenic |
| TTTGAAGTAACAATAGTAGC+TGG | 0.545111 | 8_3:+16010378 | None:intergenic |
| TATGGCTCGTCATCTTCAGT+TGG | 0.545346 | 8_3:-16009667 | Msa1279160:CDS |
| CGACCCTTCAGTAACAGCCT+TGG | 0.546926 | 8_3:-16009988 | Msa1279160:CDS |
| CTTGAACACTGAAGACATAC+CGG | 0.550556 | 8_3:-16008262 | Msa1279160:three_prime_UTR |
| TGCCAGGTTTCGGGAAATGT+AGG | 0.552442 | 8_3:-16008468 | Msa1279160:three_prime_UTR |
| GGGCTAGGAAAGGATGGAAG+TGG | 0.558818 | 8_3:-16008623 | Msa1279160:three_prime_UTR |
| GCACAGGGGCTAGGAAAGGA+TGG | 0.560511 | 8_3:-16008629 | Msa1279160:three_prime_UTR |
| TAAGATTGCTTAATTTGTGT+AGG | 0.561573 | 8_3:-16009608 | Msa1279160:exon |
| CTCAGCTGCCCGATCCCTGT+AGG | 0.562490 | 8_3:+16009702 | None:intergenic |
| AGCTACTCGTGTGGCACTGG+AGG | 0.565106 | 8_3:-16010172 | Msa1279160:CDS |
| TATCTGGTTCTGCTGACGAT+AGG | 0.571050 | 8_3:-16010140 | Msa1279160:CDS |
| TATCGCCTGCCTGCACCTCA+AGG | 0.572323 | 8_3:+16008522 | None:intergenic |
| TTTGGCTGACCTCGAAATTG+GGG | 0.573695 | 8_3:-16009638 | Msa1279160:CDS |
| TTCTCCCATCCAAATTCATA+GGG | 0.576711 | 8_3:+16008743 | None:intergenic |
| CTATTGGAAGTGGACGAAGA+AGG | 0.579824 | 8_3:-16009777 | Msa1279160:CDS |
| AGGCTGTTACTGAAGGGTCG+TGG | 0.583658 | 8_3:+16009991 | None:intergenic |
| AATCGGATGCTTCGCAACAT+GGG | 0.583760 | 8_3:-16008994 | Msa1279160:three_prime_UTR |
| TCTAATGGTCCTGAGCAGCC+TGG | 0.586700 | 8_3:-16011226 | Msa1279160:CDS |
| TCGTCAGCAGAACCAGATAA+CGG | 0.587019 | 8_3:+16010144 | None:intergenic |
| AACATTTGCAGAAGATGAAG+CGG | 0.590180 | 8_3:+16009870 | None:intergenic |
| TGATGCACAGGGGCTAGGAA+AGG | 0.595628 | 8_3:-16008633 | Msa1279160:three_prime_UTR |
| CGGGGTTGGTGGAGGACGCG+CGG | 0.596336 | 8_3:-16009088 | Msa1279160:three_prime_UTR |
| GCCTGTACAGACACAAGCCA+TGG | 0.603831 | 8_3:-16008591 | Msa1279160:three_prime_UTR |
| GGGAGGTCACACAACTGCAC+AGG | 0.604961 | 8_3:-16010040 | Msa1279160:CDS |
| TGGTGCCTGATGAAAAGGCT+TGG | 0.605956 | 8_3:-16009496 | Msa1279160:three_prime_UTR |
| TCAAGCAAGGAAATGATCAT+GGG | 0.606251 | 8_3:+16008280 | None:intergenic |
| CCCTTCAGTAACAGCCTTGG+GGG | 0.607730 | 8_3:-16009985 | Msa1279160:CDS |
| TACAAGAAACAAGAATAATG+TGG | 0.612323 | 8_3:+16008668 | None:intergenic |
| GTCCTCCACCAACCCCGGGA+GGG | 0.616433 | 8_3:+16009094 | None:intergenic |
| AAAGTCAATCTACATATCTG+AGG | 0.617143 | 8_3:+16009195 | None:intergenic |
| CAGATGGTGTATATGAACCC+AGG | 0.617237 | 8_3:+16009803 | None:intergenic |
| GAACCTTCTAAGGCATCTGA+TGG | 0.617689 | 8_3:-16010432 | Msa1279160:CDS |
| TACAACTATAGGAAAAGAGA+CGG | 0.618698 | 8_3:+16009351 | None:intergenic |
| ACCCTTCAGTAACAGCCTTG+GGG | 0.619343 | 8_3:-16009986 | Msa1279160:CDS |
| CAAGCCATGGAAAATAGAGC+AGG | 0.622008 | 8_3:-16008578 | Msa1279160:three_prime_UTR |
| TGGAAGCAGAGGAGTCATGA+GGG | 0.627728 | 8_3:-16010198 | Msa1279160:CDS |
| TGCTGACAATGTGGAAGCAG+AGG | 0.630224 | 8_3:-16010209 | Msa1279160:CDS |
| TACAATGCCATTCCCTCCCG+GGG | 0.633690 | 8_3:-16009106 | Msa1279160:three_prime_UTR |
| TGAAGCGGACATAGATGGTG+TGG | 0.634131 | 8_3:+16009885 | None:intergenic |
| TCCCAAACAAAGCCTGATTG+TGG | 0.634586 | 8_3:+16011187 | None:intergenic |
| ATGTCTTCAGTGTTCAAGCA+AGG | 0.635882 | 8_3:+16008267 | None:intergenic |
| AGCACCCTATGAATTTGGAT+GGG | 0.638372 | 8_3:-16008747 | Msa1279160:three_prime_UTR |
| GGTGCACCAACATCAGTACC+AGG | 0.644494 | 8_3:+16011208 | None:intergenic |
| CGTCCTCCACCAACCCCGGG+AGG | 0.648388 | 8_3:+16009093 | None:intergenic |
| GTGGAAGCAGAGGAGTCATG+AGG | 0.650206 | 8_3:-16010199 | Msa1279160:CDS |
| CCACTTCCAATAGACGCAGA+TGG | 0.659428 | 8_3:+16009787 | None:intergenic |
| TATGGATAAATTGATGCACA+GGG | 0.660609 | 8_3:-16008644 | Msa1279160:three_prime_UTR |
| GAGAGAGCACCAAATGTCTG+AGG | 0.661954 | 8_3:+16008720 | None:intergenic |
| AGATGGTGTATATGAACCCA+GGG | 0.667622 | 8_3:+16009804 | None:intergenic |
| TGAACAATGTGCTGACAATG+TGG | 0.672191 | 8_3:-16010218 | Msa1279160:CDS |
| CTGATTGCAAGTGTAAACAA+AGG | 0.677933 | 8_3:+16008854 | None:intergenic |
| GGATGTACTGCTGAGTATGG+TGG | 0.679538 | 8_3:+16010499 | None:intergenic |
| TAATCACCTCAAAAGTATCG+AGG | 0.680624 | 8_3:+16009052 | None:intergenic |
| ACAGTCCCAAACAACCTACA+GGG | 0.688074 | 8_3:-16009716 | Msa1279160:CDS |
| TGAGGGACAAGCTACTCGTG+TGG | 0.703418 | 8_3:-16010181 | Msa1279160:CDS |
| AAAGTTGGACCCTAGCCTTG+AGG | 0.711756 | 8_3:-16008537 | Msa1279160:three_prime_UTR |
| GGAAATGTAGGACTCAATCG+AGG | 0.716701 | 8_3:-16008456 | Msa1279160:three_prime_UTR |
| ATGTGCCTGAGAGTCAGTAG+CGG | 0.750991 | 8_3:+16010014 | None:intergenic |
| ATGGATAAATTGATGCACAG+GGG | 0.759730 | 8_3:-16008643 | Msa1279160:three_prime_UTR |
| TGGTGTATATGAACCCAGGG+AGG | 0.760508 | 8_3:+16009807 | None:intergenic |
| ATTAACGCGTCTAATCCGGG+AGG | 0.784686 | 8_3:-16010057 | Msa1279160:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTACATGAGAAAATAAAA+AGG | + | chr8_3:16009259-16009278 | None:intergenic | 15.0% |
| !!! | TTTTTATTTTCTCATGTAAT+TGG | - | chr8_3:16009258-16009277 | Msa1279160:three_prime_UTR | 15.0% |
| !!! | TTTTATTTTCTCATGTAATT+GGG | - | chr8_3:16009259-16009278 | Msa1279160:three_prime_UTR | 15.0% |
| !!! | TTATGTACTTTTGAAAAATA+TGG | - | chr8_3:16010742-16010761 | Msa1279160:intron | 15.0% |
| !! | ATAAGAAATACATAATAGTG+TGG | + | chr8_3:16008684-16008703 | None:intergenic | 20.0% |
| !! | CTATTATGTATTTCTTATTG+AGG | - | chr8_3:16008686-16008705 | Msa1279160:three_prime_UTR | 20.0% |
| !! | TATCCAAAAAGCTTATATTT+AGG | - | chr8_3:16008982-16009001 | Msa1279160:three_prime_UTR | 20.0% |
| !! | TGAGAAAATAAAAAGGAAAA+GGG | + | chr8_3:16009252-16009271 | None:intergenic | 20.0% |
| !! | ATGAGAAAATAAAAAGGAAA+AGG | + | chr8_3:16009253-16009272 | None:intergenic | 20.0% |
| !!! | CTAAAATATGCAAAATTTTC+TGG | + | chr8_3:16009381-16009400 | None:intergenic | 20.0% |
| !!! | CAGAAAATTTTGCATATTTT+AGG | - | chr8_3:16009379-16009398 | Msa1279160:three_prime_UTR | 20.0% |
| !!! | TAATTTTCTGCATTTTTTTG+TGG | - | chr8_3:16009495-16009514 | Msa1279160:three_prime_UTR | 20.0% |
| !! | TTTACTATGATGGTAATAAT+GGG | - | chr8_3:16009528-16009547 | Msa1279160:three_prime_UTR | 20.0% |
| !!! | TGTTTTATTCTGATTTTGAT+CGG | + | chr8_3:16009600-16009619 | None:intergenic | 20.0% |
| !! | TTCATACTCAAAAAATTGTT+TGG | - | chr8_3:16010551-16010570 | Msa1279160:intron | 20.0% |
| !!! | TTACGAGTAGTTATTTTTAT+TGG | - | chr8_3:16011156-16011175 | Msa1279160:CDS | 20.0% |
| !!! | TTTTAAATTTCCTGTTTTTG+AGG | - | chr8_3:16011242-16011261 | Msa1279160:CDS | 20.0% |
| !!! | TATTCTTGTTTCTTGTATTA+TGG | - | chr8_3:16011405-16011424 | Msa1279160:intron | 20.0% |
| !!! | GCTTTTGAAAATATAGATTT+AGG | - | chr8_3:16011659-16011678 | Msa1279160:intron | 20.0% |
| ! | AAAAGATATGTGAAACAACA+TGG | - | chr8_3:16008400-16008419 | Msa1279160:three_prime_UTR | 25.0% |
| ! | TTATGTATTTCTTATTGAGG+TGG | - | chr8_3:16008689-16008708 | Msa1279160:three_prime_UTR | 25.0% |
| !! | AATCTTCAGTATGATTTTGT+TGG | - | chr8_3:16008781-16008800 | Msa1279160:three_prime_UTR | 25.0% |
| !! | GTTCCTAAATATAAGCTTTT+TGG | + | chr8_3:16008988-16009007 | None:intergenic | 25.0% |
| !! | AAAAGTACATGGAATTACTT+TGG | + | chr8_3:16009065-16009084 | None:intergenic | 25.0% |
| !! | AAAGTAATTCCATGTACTTT+TGG | - | chr8_3:16009064-16009083 | Msa1279160:three_prime_UTR | 25.0% |
| ! | AAAAACAGCATGAAAATTAC+TGG | + | chr8_3:16009211-16009230 | None:intergenic | 25.0% |
| ! | GAGAAAATAAAAAGGAAAAG+GGG | + | chr8_3:16009251-16009270 | None:intergenic | 25.0% |
| ! | AGCATGCAGATAAAAAAAAT+AGG | + | chr8_3:16009423-16009442 | None:intergenic | 25.0% |
| !!! | ATTTTTTTTATCTGCATGCT+TGG | - | chr8_3:16009423-16009442 | Msa1279160:three_prime_UTR | 25.0% |
| ! | CTTTACTATGATGGTAATAA+TGG | - | chr8_3:16009527-16009546 | Msa1279160:three_prime_UTR | 25.0% |
| ! | AAATCAGATACTTCTTATTC+TGG | - | chr8_3:16010148-16010167 | Msa1279160:CDS | 25.0% |
| !!! | TAAGATTGCTTAATTTGTGT+AGG | - | chr8_3:16010459-16010478 | Msa1279160:CDS | 25.0% |
| ! | AGTATTATGAAAAATTGCTG+AGG | - | chr8_3:16010502-16010521 | Msa1279160:CDS | 25.0% |
| ! | ATTACACACAGAAAATTGTT+TGG | + | chr8_3:16010683-16010702 | None:intergenic | 25.0% |
| ! | CCATTCAACATGTAAAATTA+GGG | + | chr8_3:16010793-16010812 | None:intergenic | 25.0% |
| ! | TCCATTCAACATGTAAAATT+AGG | + | chr8_3:16010794-16010813 | None:intergenic | 25.0% |
| !! | GTTCTAAATATCCAAATAGT+AGG | - | chr8_3:16010815-16010834 | Msa1279160:intron | 25.0% |
| !!! | ATGAAAAGAATGTTGGTAAT+CGG | - | chr8_3:16011056-16011075 | Msa1279160:intron | 25.0% |
| !!! | AAAAAGGAAATTCTAGTTCT+AGG | + | chr8_3:16011291-16011310 | None:intergenic | 25.0% |
| ! | TACAAGAAACAAGAATAATG+TGG | + | chr8_3:16011402-16011421 | None:intergenic | 25.0% |
| !! | GAAATTTGAAATTCAAGTCA+TGG | + | chr8_3:16011725-16011744 | None:intergenic | 25.0% |
| !! | TATTTGCTTTTCTCATATCC+TGG | - | chr8_3:16008571-16008590 | Msa1279160:three_prime_UTR | 30.0% |
| CAATTGCGAAAAAACAGATA+TGG | + | chr8_3:16008605-16008624 | None:intergenic | 30.0% | |
| ! | CAATTGATTCCATTTGTAGA+TGG | - | chr8_3:16008619-16008638 | Msa1279160:three_prime_UTR | 30.0% |
| CAGAAATTTCCATCTACAAA+TGG | + | chr8_3:16008631-16008650 | None:intergenic | 30.0% | |
| CAAGACACATATCAAATGTA+TGG | + | chr8_3:16008750-16008769 | None:intergenic | 30.0% | |
| ! | TTCAGTATGATTTTGTTGGA+TGG | - | chr8_3:16008785-16008804 | Msa1279160:three_prime_UTR | 30.0% |
| ! | TCAGTATGATTTTGTTGGAT+GGG | - | chr8_3:16008786-16008805 | Msa1279160:three_prime_UTR | 30.0% |
| TCATCTGGATTGTATTCTTT+GGG | + | chr8_3:16008814-16008833 | None:intergenic | 30.0% | |
| ! | TATTACTATGATGCTACTTC+TGG | - | chr8_3:16008916-16008935 | Msa1279160:three_prime_UTR | 30.0% |
| ! | ATTACTATGATGCTACTTCT+GGG | - | chr8_3:16008917-16008936 | Msa1279160:three_prime_UTR | 30.0% |
| !!! | ACTTCTGGGTTTTATTATGA+CGG | - | chr8_3:16008931-16008950 | Msa1279160:three_prime_UTR | 30.0% |
| !! | TTTTATTATGACGGGAATAC+TGG | - | chr8_3:16008940-16008959 | Msa1279160:three_prime_UTR | 30.0% |
| !! | ACATATCCTAAAAGTGCTTT+GGG | + | chr8_3:16009024-16009043 | None:intergenic | 30.0% |
| !! | TACATATCCTAAAAGTGCTT+TGG | + | chr8_3:16009025-16009044 | None:intergenic | 30.0% |
| !! | ATACACTTGCTTTTAAGCTT+TGG | + | chr8_3:16009133-16009152 | None:intergenic | 30.0% |
| TGGTTCTTCACTTATAGTTA+TGG | - | chr8_3:16009175-16009194 | Msa1279160:three_prime_UTR | 30.0% | |
| TTCACTTATAGTTATGGTCT+AGG | - | chr8_3:16009181-16009200 | Msa1279160:three_prime_UTR | 30.0% | |
| ! | ATGATGGTAATAATGGGATT+TGG | - | chr8_3:16009534-16009553 | Msa1279160:three_prime_UTR | 30.0% |
| ! | TTTGAAGTAACAATAGTAGC+TGG | + | chr8_3:16009692-16009711 | None:intergenic | 30.0% |
| GAAAGAGAAAGAAAGATCAA+AGG | - | chr8_3:16009778-16009797 | Msa1279160:CDS | 30.0% | |
| GCTGAGAGAAGAAATTTATA+TGG | - | chr8_3:16010382-16010401 | Msa1279160:CDS | 30.0% | |
| !! | TAAAGCTTTTGTTTCGCTTT+AGG | - | chr8_3:16010602-16010621 | Msa1279160:intron | 30.0% |
| TACAACTATAGGAAAAGAGA+CGG | + | chr8_3:16010719-16010738 | None:intergenic | 30.0% | |
| GTACATAAACCTACAACTAT+AGG | + | chr8_3:16010730-16010749 | None:intergenic | 30.0% | |
| ! | CCCTAATTTTACATGTTGAA+TGG | - | chr8_3:16010790-16010809 | Msa1279160:intron | 30.0% |
| AAATTTACCAGCAAACCTAT+TGG | + | chr8_3:16010849-16010868 | None:intergenic | 30.0% | |
| AAAGTCAATCTACATATCTG+AGG | + | chr8_3:16010875-16010894 | None:intergenic | 30.0% | |
| ATAAAAACTTGTAGCACAGA+GGG | + | chr8_3:16011128-16011147 | None:intergenic | 30.0% | |
| TATAAAAACTTGTAGCACAG+AGG | + | chr8_3:16011129-16011148 | None:intergenic | 30.0% | |
| !!! | CGAGTAGTTATTTTTATTGG+AGG | - | chr8_3:16011159-16011178 | Msa1279160:CDS | 30.0% |
| TTATGGATAAATTGATGCAC+AGG | - | chr8_3:16011422-16011441 | Msa1279160:intron | 30.0% | |
| TATGGATAAATTGATGCACA+GGG | - | chr8_3:16011423-16011442 | Msa1279160:intron | 30.0% | |
| ACATGAATTAAATGGCAATC+CGG | + | chr8_3:16011827-16011846 | None:intergenic | 30.0% | |
| !! | TTTCTTGCTATTCCGTTTGA+GGG | - | chr8_3:16008370-16008389 | Msa1279160:three_prime_UTR | 35.0% |
| TAATTTGACATACAGCCTCT+AGG | - | chr8_3:16008547-16008566 | Msa1279160:three_prime_UTR | 35.0% | |
| GAGAAAAGCAAATAACCTAG+AGG | + | chr8_3:16008565-16008584 | None:intergenic | 35.0% | |
| ! | TTTCTGACTAGAGTTGTTTC+TGG | - | chr8_3:16008645-16008664 | Msa1279160:three_prime_UTR | 35.0% |
| GTCATCTGGATTGTATTCTT+TGG | + | chr8_3:16008815-16008834 | None:intergenic | 35.0% | |
| CCATTAGATTGTTTGTCATC+TGG | + | chr8_3:16008829-16008848 | None:intergenic | 35.0% | |
| CCAGATGACAAACAATCTAA+TGG | - | chr8_3:16008826-16008845 | Msa1279160:three_prime_UTR | 35.0% | |
| !!! | CTTCTGGGTTTTATTATGAC+GGG | - | chr8_3:16008932-16008951 | Msa1279160:three_prime_UTR | 35.0% |
| !! | ACTTTTCCCAAAGCACTTTT+AGG | - | chr8_3:16009015-16009034 | Msa1279160:three_prime_UTR | 35.0% |
| ! | CTTGAGAAACCAAAAGTACA+TGG | + | chr8_3:16009076-16009095 | None:intergenic | 35.0% |
| ! | AGAACCAACATGCATGTTTT+GGG | + | chr8_3:16009162-16009181 | None:intergenic | 35.0% |
| ! | AAGAACCAACATGCATGTTT+TGG | + | chr8_3:16009163-16009182 | None:intergenic | 35.0% |
| ATGTAATTGGGTTCTGTAGA+AGG | - | chr8_3:16009271-16009290 | Msa1279160:three_prime_UTR | 35.0% | |
| !!! | TGCATTTTTTTGTGGCATGT+AGG | - | chr8_3:16009503-16009522 | Msa1279160:three_prime_UTR | 35.0% |
| CATGTAGGTCTTTACTATGA+TGG | - | chr8_3:16009518-16009537 | Msa1279160:three_prime_UTR | 35.0% | |
| !! | TGGTTCTAGCACTAAAAAAG+TGG | - | chr8_3:16009655-16009674 | Msa1279160:CDS | 35.0% |
| TGCTTCAAAAAGCAGTATTC+TGG | - | chr8_3:16009811-16009830 | Msa1279160:CDS | 35.0% | |
| TACTCTTATGGGGGTTATTA+GGG | - | chr8_3:16010105-16010124 | Msa1279160:CDS | 35.0% | |
| AACATTTGCAGAAGATGAAG+CGG | + | chr8_3:16010200-16010219 | None:intergenic | 35.0% | |
| !! | GAGGAGACATCTGTTTTAAA+GGG | + | chr8_3:16010244-16010263 | None:intergenic | 35.0% |
| ! | TTATGAGTTGAAGCAGAAAG+AGG | + | chr8_3:16010328-16010347 | None:intergenic | 35.0% |
| TCTTTCTGCTTCAACTCATA+AGG | - | chr8_3:16010327-16010346 | Msa1279160:CDS | 35.0% | |
| ATCTTCAGTTGGCAATGATT+TGG | - | chr8_3:16010411-16010430 | Msa1279160:CDS | 35.0% | |
| ATTGAAGAAATCTCCGTGAT+TGG | - | chr8_3:16010653-16010672 | Msa1279160:intron | 35.0% | |
| TTGAAGAAATCTCCGTGATT+GGG | - | chr8_3:16010654-16010673 | Msa1279160:intron | 35.0% | |
| ! | ATTGTTTGGTTTCCCAATCA+CGG | + | chr8_3:16010669-16010688 | None:intergenic | 35.0% |
| ! | GTCTCTTTTCCTATAGTTGT+AGG | - | chr8_3:16010718-16010737 | Msa1279160:intron | 35.0% |
| !! | TGGTTTGCTAACCTACTATT+TGG | + | chr8_3:16010829-16010848 | None:intergenic | 35.0% |
| TAGTAGGTTAGCAAACCAAT+AGG | - | chr8_3:16010831-16010850 | Msa1279160:intron | 35.0% | |
| !! | TAATCACCTCAAAAGTATCG+AGG | + | chr8_3:16011018-16011037 | None:intergenic | 35.0% |
| GCGATTGATGAAAAGAATGT+TGG | - | chr8_3:16011049-16011068 | Msa1279160:intron | 35.0% | |
| CTGATTGCAAGTGTAAACAA+AGG | + | chr8_3:16011216-16011235 | None:intergenic | 35.0% | |
| AAACAAGCACCCTATGAATT+TGG | - | chr8_3:16011315-16011334 | Msa1279160:intron | 35.0% | |
| TTCTCCCATCCAAATTCATA+GGG | + | chr8_3:16011327-16011346 | None:intergenic | 35.0% | |
| ATGGATAAATTGATGCACAG+GGG | - | chr8_3:16011424-16011443 | Msa1279160:intron | 35.0% | |
| !! | TTCATAAAAAAGCACTTGCC+AGG | - | chr8_3:16011583-16011602 | Msa1279160:intron | 35.0% |
| AGGTTTGAGCACATATTCTA+GGG | - | chr8_3:16011631-16011650 | Msa1279160:intron | 35.0% | |
| TCAAGCAAGGAAATGATCAT+GGG | + | chr8_3:16011790-16011809 | None:intergenic | 35.0% | |
| TTCAAGCAAGGAAATGATCA+TGG | + | chr8_3:16011791-16011810 | None:intergenic | 35.0% | |
| CTCAAACGGAATAGCAAGAA+AGG | + | chr8_3:16008371-16008390 | None:intergenic | 40.0% | |
| !! | CTTTCTTGCTATTCCGTTTG+AGG | - | chr8_3:16008369-16008388 | Msa1279160:three_prime_UTR | 40.0% |
| ! | CTTTTCAATCCTCCCTCAAA+CGG | + | chr8_3:16008385-16008404 | None:intergenic | 40.0% |
| GCTTTATCAGTCGCAGTTAA+TGG | - | chr8_3:16008487-16008506 | Msa1279160:three_prime_UTR | 40.0% | |
| ACAGATATGGAGAAACTTCC+AGG | + | chr8_3:16008592-16008611 | None:intergenic | 40.0% | |
| !! | ACCACAATCAGGCTTTGTTT+GGG | - | chr8_3:16008879-16008898 | Msa1279160:three_prime_UTR | 40.0% |
| AGTACCCAAAACATGCATGT+TGG | - | chr8_3:16009155-16009174 | Msa1279160:three_prime_UTR | 40.0% | |
| !! | TCTGATTTTGATCGGTGCAT+GGG | + | chr8_3:16009592-16009611 | None:intergenic | 40.0% |
| !! | TTCTGATTTTGATCGGTGCA+TGG | + | chr8_3:16009593-16009612 | None:intergenic | 40.0% |
| TAACGAGTCTGAACCTTCTA+AGG | - | chr8_3:16009625-16009644 | Msa1279160:CDS | 40.0% | |
| ! | TGAACAATGTGCTGACAATG+TGG | - | chr8_3:16009849-16009868 | Msa1279160:CDS | 40.0% |
| TAAAAACTGAGACAGTCGCA+AGG | - | chr8_3:16009984-16010003 | Msa1279160:CDS | 40.0% | |
| AAAAACTGAGACAGTCGCAA+GGG | - | chr8_3:16009985-16010004 | Msa1279160:CDS | 40.0% | |
| GGAAATTAACGCGTCTAATC+CGG | - | chr8_3:16010006-16010025 | Msa1279160:CDS | 40.0% | |
| GAAATTAACGCGTCTAATCC+GGG | - | chr8_3:16010007-16010026 | Msa1279160:CDS | 40.0% | |
| GTACTCTTATGGGGGTTATT+AGG | - | chr8_3:16010104-16010123 | Msa1279160:CDS | 40.0% | |
| ACTCTTATGGGGGTTATTAG+GGG | - | chr8_3:16010106-16010125 | Msa1279160:CDS | 40.0% | |
| !! | GGAGGAGACATCTGTTTTAA+AGG | + | chr8_3:16010245-16010264 | None:intergenic | 40.0% |
| AGATGGTGTATATGAACCCA+GGG | + | chr8_3:16010266-16010285 | None:intergenic | 40.0% | |
| TATACACCATCTGCGTCTAT+TGG | - | chr8_3:16010274-16010293 | Msa1279160:CDS | 40.0% | |
| ATTTGGCTGACCTCGAAATT+GGG | - | chr8_3:16010428-16010447 | Msa1279160:CDS | 40.0% | |
| TACTTGAATCCCCAATTTCG+AGG | + | chr8_3:16010441-16010460 | None:intergenic | 40.0% | |
| !! | TTGTTTGGTGCCTGATGAAA+AGG | - | chr8_3:16010566-16010585 | Msa1279160:intron | 40.0% |
| ! | ATACTCCAAGCCTTTTCATC+AGG | + | chr8_3:16010579-16010598 | None:intergenic | 40.0% |
| TAGCAAACCAATAGGTTTGC+TGG | - | chr8_3:16010839-16010858 | Msa1279160:intron | 40.0% | |
| ! | TGTCAACCTCGATACTTTTG+AGG | - | chr8_3:16011009-16011028 | Msa1279160:intron | 40.0% |
| !! | TTGGAGGTGTTACTGTTTAG+TGG | - | chr8_3:16011175-16011194 | Msa1279160:CDS | 40.0% |
| TCTAGCACATCCTCAAAAAC+AGG | + | chr8_3:16011255-16011274 | None:intergenic | 40.0% | |
| !! | TTTTTGAGGATGTGCTAGAG+TGG | - | chr8_3:16011256-16011275 | Msa1279160:CDS | 40.0% |
| GGGTGCTTGTTTGAAGAAAA+AGG | + | chr8_3:16011307-16011326 | None:intergenic | 40.0% | |
| AAGCACCCTATGAATTTGGA+TGG | - | chr8_3:16011319-16011338 | Msa1279160:intron | 40.0% | |
| AGCACCCTATGAATTTGGAT+GGG | - | chr8_3:16011320-16011339 | Msa1279160:intron | 40.0% | |
| GTTCTCCCATCCAAATTCAT+AGG | + | chr8_3:16011328-16011347 | None:intergenic | 40.0% | |
| ! | AAGTCCTGCTCTATTTTCCA+TGG | + | chr8_3:16011496-16011515 | None:intergenic | 40.0% |
| ATGGAAAATAGAGCAGGACT+TGG | - | chr8_3:16011495-16011514 | Msa1279160:intron | 40.0% | |
| TGGAAGTCAGCAGAAAAAGT+TGG | - | chr8_3:16011515-16011534 | Msa1279160:intron | 40.0% | |
| !! | AAAAAGCACTTGCCAGGTTT+CGG | - | chr8_3:16011589-16011608 | Msa1279160:intron | 40.0% |
| GAGGTTTGAGCACATATTCT+AGG | - | chr8_3:16011630-16011649 | Msa1279160:intron | 40.0% | |
| ATGTCTTCAGTGTTCAAGCA+AGG | + | chr8_3:16011803-16011822 | None:intergenic | 40.0% | |
| CTTGAACACTGAAGACATAC+CGG | - | chr8_3:16011805-16011824 | Msa1279160:intron | 40.0% | |
| AACTGCGACTGATAAAGCGA+AGG | + | chr8_3:16008485-16008504 | None:intergenic | 45.0% | |
| !! | CACCACAATCAGGCTTTGTT+TGG | - | chr8_3:16008878-16008897 | Msa1279160:three_prime_UTR | 45.0% |
| TCCCAAACAAAGCCTGATTG+TGG | + | chr8_3:16008883-16008902 | None:intergenic | 45.0% | |
| ! | TTTGTTTGGGACGAAGCATC+TGG | - | chr8_3:16008892-16008911 | Msa1279160:three_prime_UTR | 45.0% |
| TATCTGCATGCTTGGAACAC+TGG | - | chr8_3:16009431-16009450 | Msa1279160:three_prime_UTR | 45.0% | |
| ATGGGATGTACTGCTGAGTA+TGG | + | chr8_3:16009574-16009593 | None:intergenic | 45.0% | |
| !! | GAACCTTCTAAGGCATCTGA+TGG | - | chr8_3:16009635-16009654 | Msa1279160:CDS | 45.0% |
| GAACCATCAGATGCCTTAGA+AGG | + | chr8_3:16009641-16009660 | None:intergenic | 45.0% | |
| AAATGAGAAGCCAGCTTCAC+TGG | - | chr8_3:16009709-16009728 | Msa1279160:CDS | 45.0% | |
| TCGTCAGCAGAACCAGATAA+CGG | + | chr8_3:16009926-16009945 | None:intergenic | 45.0% | |
| !! | TATCTGGTTCTGCTGACGAT+AGG | - | chr8_3:16009927-16009946 | Msa1279160:CDS | 45.0% |
| GAAGATGAAGCGGACATAGA+TGG | + | chr8_3:16010190-16010209 | None:intergenic | 45.0% | |
| TAAAACAGATGTCTCCTCCC+TGG | - | chr8_3:16010246-16010265 | Msa1279160:CDS | 45.0% | |
| AAAACAGATGTCTCCTCCCT+GGG | - | chr8_3:16010247-16010266 | Msa1279160:CDS | 45.0% | |
| CAGATGGTGTATATGAACCC+AGG | + | chr8_3:16010267-16010286 | None:intergenic | 45.0% | |
| CTATTGGAAGTGGACGAAGA+AGG | - | chr8_3:16010290-16010309 | Msa1279160:CDS | 45.0% | |
| AACAGTCCCAAACAACCTAC+AGG | - | chr8_3:16010350-16010369 | Msa1279160:CDS | 45.0% | |
| ACAGTCCCAAACAACCTACA+GGG | - | chr8_3:16010351-16010370 | Msa1279160:CDS | 45.0% | |
| TATGGCTCGTCATCTTCAGT+TGG | - | chr8_3:16010400-16010419 | Msa1279160:CDS | 45.0% | |
| GATTTGGCTGACCTCGAAAT+TGG | - | chr8_3:16010427-16010446 | Msa1279160:CDS | 45.0% | |
| TTTGGCTGACCTCGAAATTG+GGG | - | chr8_3:16010429-16010448 | Msa1279160:CDS | 45.0% | |
| ATGCAAAATCGCGAGCTTCA+AGG | + | chr8_3:16010928-16010947 | None:intergenic | 45.0% | |
| ! | AAGCTCGCGATTTTGCATCA+AGG | - | chr8_3:16010930-16010949 | Msa1279160:intron | 45.0% |
| ! | TCGCGATTTTGCATCAAGGA+GGG | - | chr8_3:16010934-16010953 | Msa1279160:intron | 45.0% |
| TAATCGGATGCTTCGCAACA+TGG | - | chr8_3:16011072-16011091 | Msa1279160:intron | 45.0% | |
| AATCGGATGCTTCGCAACAT+GGG | - | chr8_3:16011073-16011092 | Msa1279160:intron | 45.0% | |
| ATGGGAGAACCTCAGACATT+TGG | - | chr8_3:16011338-16011357 | Msa1279160:intron | 45.0% | |
| TAAATTGATGCACAGGGGCT+AGG | - | chr8_3:16011429-16011448 | Msa1279160:intron | 45.0% | |
| CAAGCCATGGAAAATAGAGC+AGG | - | chr8_3:16011489-16011508 | Msa1279160:intron | 45.0% | |
| !! | AAAAGCACTTGCCAGGTTTC+GGG | - | chr8_3:16011590-16011609 | Msa1279160:intron | 45.0% |
| GGAAATGTAGGACTCAATCG+AGG | - | chr8_3:16011611-16011630 | Msa1279160:intron | 45.0% | |
| !! | CTTGCTATTCCGTTTGAGGG+AGG | - | chr8_3:16008373-16008392 | Msa1279160:three_prime_UTR | 50.0% |
| GATGTTGGTGCACCACAATC+AGG | - | chr8_3:16008868-16008887 | Msa1279160:three_prime_UTR | 50.0% | |
| GGATGTACTGCTGAGTATGG+TGG | + | chr8_3:16009571-16009590 | None:intergenic | 50.0% | |
| TGCTGACAATGTGGAAGCAG+AGG | - | chr8_3:16009858-16009877 | Msa1279160:CDS | 50.0% | |
| TGGAAGCAGAGGAGTCATGA+GGG | - | chr8_3:16009869-16009888 | Msa1279160:CDS | 50.0% | |
| CTGGAGGACAATCCGTTATC+TGG | - | chr8_3:16009911-16009930 | Msa1279160:CDS | 50.0% | |
| ATTAACGCGTCTAATCCGGG+AGG | - | chr8_3:16010010-16010029 | Msa1279160:CDS | 50.0% | |
| ATGTGCCTGAGAGTCAGTAG+CGG | + | chr8_3:16010056-16010075 | None:intergenic | 50.0% | |
| GACCCTTCAGTAACAGCCTT+GGG | - | chr8_3:16010080-16010099 | Msa1279160:CDS | 50.0% | |
| ACCCTTCAGTAACAGCCTTG+GGG | - | chr8_3:16010081-16010100 | Msa1279160:CDS | 50.0% | |
| !! | AGCCTTGGGGGTACTCTTAT+GGG | - | chr8_3:16010094-16010113 | Msa1279160:CDS | 50.0% |
| GTTATTAGGGGCTCAGGAAG+AGG | - | chr8_3:16010118-16010137 | Msa1279160:CDS | 50.0% | |
| TGAAGCGGACATAGATGGTG+TGG | + | chr8_3:16010185-16010204 | None:intergenic | 50.0% | |
| TGGTGTATATGAACCCAGGG+AGG | + | chr8_3:16010263-16010282 | None:intergenic | 50.0% | |
| CCACTTCCAATAGACGCAGA+TGG | + | chr8_3:16010283-16010302 | None:intergenic | 50.0% | |
| CCATCTGCGTCTATTGGAAG+TGG | - | chr8_3:16010280-16010299 | Msa1279160:CDS | 50.0% | |
| CCGATCCCTGTAGGTTGTTT+GGG | + | chr8_3:16010359-16010378 | None:intergenic | 50.0% | |
| CCCAAACAACCTACAGGGAT+CGG | - | chr8_3:16010356-16010375 | Msa1279160:CDS | 50.0% | |
| CCAAACAACCTACAGGGATC+GGG | - | chr8_3:16010357-16010376 | Msa1279160:CDS | 50.0% | |
| TGGTGCCTGATGAAAAGGCT+TGG | - | chr8_3:16010571-16010590 | Msa1279160:intron | 50.0% | |
| GCGAGCTTCAAGGACACAAT+TGG | + | chr8_3:16010918-16010937 | None:intergenic | 50.0% | |
| ! | CTCGCGATTTTGCATCAAGG+AGG | - | chr8_3:16010933-16010952 | Msa1279160:intron | 50.0% |
| ! | CGCGATTTTGCATCAAGGAG+GGG | - | chr8_3:16010935-16010954 | Msa1279160:intron | 50.0% |
| GATACAATGCCATTCCCTCC+CGG | - | chr8_3:16010959-16010978 | Msa1279160:intron | 50.0% | |
| ATACAATGCCATTCCCTCCC+GGG | - | chr8_3:16010960-16010979 | Msa1279160:intron | 50.0% | |
| !! | GAGAGAGCACCAAATGTCTG+AGG | + | chr8_3:16011350-16011369 | None:intergenic | 50.0% |
| ! | TCCATGGCTTGTGTCTGTAC+AGG | + | chr8_3:16011480-16011499 | None:intergenic | 50.0% |
| !! | AAAGTTGGACCCTAGCCTTG+AGG | - | chr8_3:16011530-16011549 | Msa1279160:intron | 50.0% |
| TGCCAGGTTTCGGGAAATGT+AGG | - | chr8_3:16011599-16011618 | Msa1279160:intron | 50.0% | |
| GTCCTACATTTCCCGAAACC+TGG | + | chr8_3:16011604-16011623 | None:intergenic | 50.0% | |
| TCTAATGGTCCTGAGCAGCC+TGG | - | chr8_3:16008841-16008860 | Msa1279160:three_prime_UTR | 55.0% | |
| ACATCAGTACCAGGCTGCTC+AGG | + | chr8_3:16008853-16008872 | None:intergenic | 55.0% | |
| !! | GAGCAGCCTGGTACTGATGT+TGG | - | chr8_3:16008853-16008872 | Msa1279160:three_prime_UTR | 55.0% |
| GGTGCACCAACATCAGTACC+AGG | + | chr8_3:16008862-16008881 | None:intergenic | 55.0% | |
| ACAGCATCTGCCAGTGAAGC+TGG | + | chr8_3:16009722-16009741 | None:intergenic | 55.0% | |
| TTCACTGGCAGATGCTGTCC+AGG | - | chr8_3:16009724-16009743 | Msa1279160:CDS | 55.0% | |
| GTGGAAGCAGAGGAGTCATG+AGG | - | chr8_3:16009868-16009887 | Msa1279160:CDS | 55.0% | |
| TGAGGGACAAGCTACTCGTG+TGG | - | chr8_3:16009886-16009905 | Msa1279160:CDS | 55.0% | |
| ACAAGCTACTCGTGTGGCAC+TGG | - | chr8_3:16009892-16009911 | Msa1279160:CDS | 55.0% | |
| TGTGCAGTTGTGTGACCTCC+CGG | + | chr8_3:16010028-16010047 | None:intergenic | 55.0% | |
| AGGCTGTTACTGAAGGGTCG+TGG | + | chr8_3:16010079-16010098 | None:intergenic | 55.0% | |
| CGACCCTTCAGTAACAGCCT+TGG | - | chr8_3:16010079-16010098 | Msa1279160:CDS | 55.0% | |
| CCCCCAAGGCTGTTACTGAA+GGG | + | chr8_3:16010085-16010104 | None:intergenic | 55.0% | |
| CCCTTCAGTAACAGCCTTGG+GGG | - | chr8_3:16010082-16010101 | Msa1279160:CDS | 55.0% | |
| ACCCCCAAGGCTGTTACTGA+AGG | + | chr8_3:16010086-16010105 | None:intergenic | 55.0% | |
| !! | CAGCCTTGGGGGTACTCTTA+TGG | - | chr8_3:16010093-16010112 | Msa1279160:CDS | 55.0% |
| !! | GCCTTGGGGGTACTCTTATG+GGG | - | chr8_3:16010095-16010114 | Msa1279160:CDS | 55.0% |
| !! | CCTTGGGGGTACTCTTATGG+GGG | - | chr8_3:16010096-16010115 | Msa1279160:CDS | 55.0% |
| ATGGGGGTTATTAGGGGCTC+AGG | - | chr8_3:16010112-16010131 | Msa1279160:CDS | 55.0% | |
| CCCGATCCCTGTAGGTTGTT+TGG | + | chr8_3:16010360-16010379 | None:intergenic | 55.0% | |
| TACAATGCCATTCCCTCCCG+GGG | - | chr8_3:16010961-16010980 | Msa1279160:intron | 55.0% | |
| TGATGCACAGGGGCTAGGAA+AGG | - | chr8_3:16011434-16011453 | Msa1279160:intron | 55.0% | |
| GGGCTAGGAAAGGATGGAAG+TGG | - | chr8_3:16011444-16011463 | Msa1279160:intron | 55.0% | |
| GCCTGTACAGACACAAGCCA+TGG | - | chr8_3:16011476-16011495 | Msa1279160:intron | 55.0% | |
| ! | AGCTACTCGTGTGGCACTGG+AGG | - | chr8_3:16009895-16009914 | Msa1279160:CDS | 60.0% |
| GGGAGGTCACACAACTGCAC+AGG | - | chr8_3:16010027-16010046 | Msa1279160:CDS | 60.0% | |
| !! | GGTTGCCGCTACTGACTCTC+AGG | - | chr8_3:16010048-16010067 | Msa1279160:CDS | 60.0% |
| !! | CCCCCATAAGAGTACCCCCA+AGG | + | chr8_3:16010099-16010118 | None:intergenic | 60.0% |
| GGATGCTTCGCAACATGGGC+TGG | - | chr8_3:16011077-16011096 | Msa1279160:intron | 60.0% | |
| GCACAGGGGCTAGGAAAGGA+TGG | - | chr8_3:16011438-16011457 | Msa1279160:intron | 60.0% | |
| CTGCCTGCACCTCAAGGCTA+GGG | + | chr8_3:16011542-16011561 | None:intergenic | 60.0% | |
| TATCGCCTGCCTGCACCTCA+AGG | + | chr8_3:16011548-16011567 | None:intergenic | 60.0% | |
| CTCAGCTGCCCGATCCCTGT+AGG | + | chr8_3:16010368-16010387 | None:intergenic | 65.0% | |
| ATGCCATTCCCTCCCGGGGT+TGG | - | chr8_3:16010965-16010984 | Msa1279160:intron | 65.0% | |
| !! | GCTTCGCAACATGGGCTGGC+AGG | - | chr8_3:16011081-16011100 | Msa1279160:intron | 65.0% |
| !! | CGCAACATGGGCTGGCAGGA+AGG | - | chr8_3:16011085-16011104 | Msa1279160:intron | 65.0% |
| !! | CATGGGCTGGCAGGAAGGCT+TGG | - | chr8_3:16011090-16011109 | Msa1279160:intron | 65.0% |
| !! | GGACCCTAGCCTTGAGGTGC+AGG | - | chr8_3:16011536-16011555 | Msa1279160:intron | 65.0% |
| CCTGCCTGCACCTCAAGGCT+AGG | + | chr8_3:16011543-16011562 | None:intergenic | 65.0% | |
| !! | CCTAGCCTTGAGGTGCAGGC+AGG | - | chr8_3:16011540-16011559 | Msa1279160:intron | 65.0% |
| CAGCAGCAGCTGCAGCTGCC+TGG | + | chr8_3:16009745-16009764 | None:intergenic | 70.0% | |
| CCACCAACCCCGGGAGGGAA+TGG | + | chr8_3:16010971-16010990 | None:intergenic | 70.0% | |
| CCATTCCCTCCCGGGGTTGG+TGG | - | chr8_3:16010968-16010987 | Msa1279160:intron | 70.0% | |
| !! | TTCCCTCCCGGGGTTGGTGG+AGG | - | chr8_3:16010971-16010990 | Msa1279160:intron | 70.0% |
| GTCCTCCACCAACCCCGGGA+GGG | + | chr8_3:16010976-16010995 | None:intergenic | 70.0% | |
| ! | GTTGGTGGAGGACGCGCGGT+TGG | - | chr8_3:16010983-16011002 | Msa1279160:intron | 70.0% |
| CGTCCTCCACCAACCCCGGG+AGG | + | chr8_3:16010977-16010996 | None:intergenic | 75.0% | |
| GCGCGTCCTCCACCAACCCC+GGG | + | chr8_3:16010980-16010999 | None:intergenic | 75.0% | |
| CGCGCGTCCTCCACCAACCC+CGG | + | chr8_3:16010981-16011000 | None:intergenic | 75.0% | |
| !! | CGGGGTTGGTGGAGGACGCG+CGG | - | chr8_3:16010979-16010998 | Msa1279160:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 16008238 | 16011851 | 16008238 | ID=Msa1279160;Name=Msa1279160 |
| chr8_3 | mRNA | 16008238 | 16011851 | 16008238 | ID=Msa1279160-mRNA-1;Parent=Msa1279160;Name=Msa1279160-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.5|0.33|0.66|1|1|3|1380|373 |
| chr8_3 | exon | 16008238 | 16010564 | 16008238 | ID=Msa1279160-mRNA-1:exon:6192;Parent=Msa1279160-mRNA-1 |
| chr8_3 | exon | 16011128 | 16011299 | 16011128 | ID=Msa1279160-mRNA-1:exon:6191;Parent=Msa1279160-mRNA-1 |
| chr8_3 | exon | 16011849 | 16011851 | 16011849 | ID=Msa1279160-mRNA-1:exon:6190;Parent=Msa1279160-mRNA-1 |
| chr8_3 | CDS | 16011849 | 16011851 | 16011849 | ID=Msa1279160-mRNA-1:cds;Parent=Msa1279160-mRNA-1 |
| chr8_3 | CDS | 16011128 | 16011299 | 16011128 | ID=Msa1279160-mRNA-1:cds;Parent=Msa1279160-mRNA-1 |
| chr8_3 | CDS | 16009618 | 16010564 | 16009618 | ID=Msa1279160-mRNA-1:cds;Parent=Msa1279160-mRNA-1 |
| chr8_3 | three_prime_UTR | 16008238 | 16009617 | 16008238 | ID=Msa1279160-mRNA-1:three_prime_utr;Parent=Msa1279160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
