Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384750 | XP_013466069.2 | 99.076 | 649 | 6 | 0 | 1 | 649 | 3 | 651 | 0.0 | 1321 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384750 | sp|Q9FRK5|Y1514_ARATH | 57.014 | 663 | 225 | 16 | 1 | 649 | 1 | 617 | 0.0 | 691 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384750 | A0A396JMB9 | 99.076 | 649 | 6 | 0 | 1 | 649 | 3 | 651 | 0.0 | 1321 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000050 | Msa1384750 | 0.804446 | 2.151759e-49 | -8.615850e-47 |
| Msa0006110 | Msa1384750 | 0.815354 | 9.653231e-52 | -8.615850e-47 |
| Msa0010110 | Msa1384750 | 0.814154 | 1.780408e-51 | -8.615850e-47 |
| Msa0032590 | Msa1384750 | 0.807046 | 6.119363e-50 | -8.615850e-47 |
| Msa0053860 | Msa1384750 | 0.813925 | 2.000196e-51 | -8.615850e-47 |
| Msa0065680 | Msa1384750 | -0.801799 | 7.591769e-49 | -8.615850e-47 |
| Msa0103770 | Msa1384750 | 0.802565 | 5.281696e-49 | -8.615850e-47 |
| Msa0104670 | Msa1384750 | 0.829752 | 4.317151e-55 | -8.615850e-47 |
| Msa0106620 | Msa1384750 | 0.808755 | 2.649725e-50 | -8.615850e-47 |
| Msa0106710 | Msa1384750 | 0.806112 | 9.636858e-50 | -8.615850e-47 |
| Msa1345810 | Msa1384750 | 0.813358 | 2.665139e-51 | -8.615850e-47 |
| Msa1346660 | Msa1384750 | 0.834614 | 2.706441e-56 | -8.615850e-47 |
| Msa1355450 | Msa1384750 | 0.811624 | 6.378462e-51 | -8.615850e-47 |
| Msa1368430 | Msa1384750 | 0.805263 | 1.452807e-49 | -8.615850e-47 |
| Msa1384750 | Msa1419690 | 0.805217 | 1.484759e-49 | -8.615850e-47 |
| Msa1384750 | Msa1426710 | 0.801586 | 8.397349e-49 | -8.615850e-47 |
| Msa1384750 | Msa1442920 | 0.832145 | 1.117345e-55 | -8.615850e-47 |
| Msa1384750 | Msa1448560 | 0.809691 | 1.669609e-50 | -8.615850e-47 |
| Msa1384750 | Msa1452710 | 0.849458 | 3.191593e-60 | -8.615850e-47 |
| Msa1384750 | Msa1458680 | 0.845754 | 3.333387e-59 | -8.615850e-47 |
| Msa0611540 | Msa1384750 | -0.814362 | 1.601113e-51 | -8.615850e-47 |
| Msa0616070 | Msa1384750 | 0.809828 | 1.560356e-50 | -8.615850e-47 |
| Msa0696540 | Msa1384750 | 0.805322 | 1.411762e-49 | -8.615850e-47 |
| Msa0729150 | Msa1384750 | 0.811150 | 8.083185e-51 | -8.615850e-47 |
| Msa0733010 | Msa1384750 | 0.801508 | 8.710079e-49 | -8.615850e-47 |
| Msa0738340 | Msa1384750 | 0.800231 | 1.587895e-48 | -8.615850e-47 |
| Msa0756380 | Msa1384750 | 0.809522 | 1.814983e-50 | -8.615850e-47 |
| Msa0797770 | Msa1384750 | 0.806845 | 6.750353e-50 | -8.615850e-47 |
| Msa0829330 | Msa1384750 | 0.802615 | 5.157034e-49 | -8.615850e-47 |
| Msa0832340 | Msa1384750 | 0.812795 | 3.541791e-51 | -8.615850e-47 |
| Msa0833530 | Msa1384750 | 0.804392 | 2.207867e-49 | -8.615850e-47 |
| Msa0835230 | Msa1384750 | 0.816396 | 5.649921e-52 | -8.615850e-47 |
| Msa0149270 | Msa1384750 | 0.813436 | 2.562013e-51 | -8.615850e-47 |
| Msa0150860 | Msa1384750 | 0.802522 | 5.389881e-49 | -8.615850e-47 |
| Msa0168690 | Msa1384750 | 0.802326 | 5.916970e-49 | -8.615850e-47 |
| Msa0204960 | Msa1384750 | 0.804302 | 2.306027e-49 | -8.615850e-47 |
| Msa0218370 | Msa1384750 | 0.805866 | 1.085400e-49 | -8.615850e-47 |
| Msa0224780 | Msa1384750 | 0.832933 | 7.124714e-56 | -8.615850e-47 |
| Msa0234090 | Msa1384750 | 0.800771 | 1.232794e-48 | -8.615850e-47 |
| Msa0237420 | Msa1384750 | 0.809784 | 1.594323e-50 | -8.615850e-47 |
| Msa1225860 | Msa1384750 | -0.806602 | 7.597496e-50 | -8.615850e-47 |
| Msa1243490 | Msa1384750 | 0.804427 | 2.171107e-49 | -8.615850e-47 |
| Msa1271130 | Msa1384750 | 0.816546 | 5.229824e-52 | -8.615850e-47 |
| Msa1279160 | Msa1384750 | 0.801986 | 6.951120e-49 | -8.615850e-47 |
| Msa1283800 | Msa1384750 | 0.811156 | 8.061902e-51 | -8.615850e-47 |
| Msa1285550 | Msa1384750 | 0.805550 | 1.264835e-49 | -8.615850e-47 |
| Msa1341840 | Msa1384750 | 0.804054 | 2.597187e-49 | -8.615850e-47 |
| Msa0381610 | Msa1384750 | -0.808540 | 2.945836e-50 | -8.615850e-47 |
| Msa0425170 | Msa1384750 | 0.813698 | 2.243956e-51 | -8.615850e-47 |
| Msa0450400 | Msa1384750 | -0.824543 | 7.627018e-54 | -8.615850e-47 |
| Msa1004840 | Msa1384750 | 0.803008 | 4.278168e-49 | -8.615850e-47 |
| Msa1016320 | Msa1384750 | 0.803445 | 3.474606e-49 | -8.615850e-47 |
| Msa1065010 | Msa1384750 | 0.809063 | 2.276467e-50 | -8.615850e-47 |
| Msa1094190 | Msa1384750 | 0.828864 | 7.093777e-55 | -8.615850e-47 |
| Msa1101090 | Msa1384750 | 0.811717 | 6.087003e-51 | -8.615850e-47 |
| Msa0240900 | Msa1384750 | 0.800256 | 1.569264e-48 | -8.615850e-47 |
| Msa0261090 | Msa1384750 | 0.812327 | 4.482776e-51 | -8.615850e-47 |
| Msa0287780 | Msa1384750 | 0.813298 | 2.747293e-51 | -8.615850e-47 |
| Msa0287870 | Msa1384750 | 0.847164 | 1.375340e-59 | -8.615850e-47 |
| Msa0288080 | Msa1384750 | 0.803090 | 4.114623e-49 | -8.615850e-47 |
| Msa0305840 | Msa1384750 | 0.803085 | 4.124507e-49 | -8.615850e-47 |
| Msa0330340 | Msa1384750 | 0.801874 | 7.329669e-49 | -8.615850e-47 |
| Msa0337580 | Msa1384750 | 0.819912 | 9.052643e-53 | -8.615850e-47 |
| Msa1111380 | Msa1384750 | 0.824607 | 7.365969e-54 | -8.615850e-47 |
| Msa1121480 | Msa1384750 | 0.811001 | 8.707856e-51 | -8.615850e-47 |
| Msa1121490 | Msa1384750 | 0.824855 | 6.435946e-54 | -8.615850e-47 |
| Msa1145810 | Msa1384750 | 0.814508 | 1.486329e-51 | -8.615850e-47 |
| Msa0534150 | Msa1384750 | 0.801258 | 9.801570e-49 | -8.615850e-47 |
| Msa0544660 | Msa1384750 | 0.805058 | 1.603242e-49 | -8.615850e-47 |
| Msa0545850 | Msa1384750 | 0.801714 | 7.903799e-49 | -8.615850e-47 |
| Msa0583360 | Msa1384750 | -0.800675 | 1.289741e-48 | -8.615850e-47 |
| Msa0855870 | Msa1384750 | 0.804360 | 2.242828e-49 | -8.615850e-47 |
| Msa0857940 | Msa1384750 | 0.803329 | 3.672315e-49 | -8.615850e-47 |
| Msa0878220 | Msa1384750 | 0.815141 | 1.076025e-51 | -8.615850e-47 |
| Msa0894710 | Msa1384750 | 0.805894 | 1.071057e-49 | -8.615850e-47 |
| Msa0914270 | Msa1384750 | 0.800368 | 1.489371e-48 | -8.615850e-47 |
| Msa0936390 | Msa1384750 | 0.828919 | 6.877717e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384750 | MtrunA17_Chr1g0154741 | 99.076 | 649 | 6 | 0 | 1 | 649 | 3 | 651 | 0.0 | 1321 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1384750 | AT1G75140.1 | 57.014 | 663 | 225 | 16 | 1 | 649 | 1 | 617 | 0.0 | 691 |
| Msa1384750 | AT1G19370.1 | 54.795 | 657 | 237 | 16 | 1 | 649 | 1 | 605 | 0.0 | 660 |
Find 149 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGCAGGGTCATTGGATTTA+AGG | 0.156932 | tig0020679:-30127 | Msa1384750:CDS |
| TCTTGCCTTGCAAGCAATTA+AGG | 0.160564 | tig0020679:-29907 | Msa1384750:CDS |
| GCTTATTGTTAACCCTAAAA+AGG | 0.215485 | tig0020679:-29877 | Msa1384750:CDS |
| ATTTGCATCTGCTGTGAAAT+TGG | 0.223785 | tig0020679:-30660 | Msa1384750:CDS |
| TGTGAGTGCTTCCTTCTTCT+TGG | 0.230576 | tig0020679:+29539 | None:intergenic |
| AACCCTTCATGATCCTTAAA+AGG | 0.231418 | tig0020679:+30608 | None:intergenic |
| TTGAATTCACCTTTATAAAT+AGG | 0.254344 | tig0020679:+29630 | None:intergenic |
| GAATGTTGATACATAGAGTT+TGG | 0.278494 | tig0020679:-30412 | Msa1384750:CDS |
| CGATACTAGTGGGAAGATTA+AGG | 0.281011 | tig0020679:-30246 | Msa1384750:CDS |
| ACATGCCATCTCTTCGTTTA+GGG | 0.284583 | tig0020679:+29205 | None:intergenic |
| GTTGTAACTGGTCATGAAAA+TGG | 0.297865 | tig0020679:-30437 | Msa1384750:CDS |
| TCCAATCTACCTATTTATAA+AGG | 0.304783 | tig0020679:-29639 | Msa1384750:CDS |
| GATTGTATTGAACATGATTC+AGG | 0.304864 | tig0020679:+31010 | None:intergenic |
| TTTATTGGATTCACCTATTA+CGG | 0.311308 | tig0020679:-30501 | Msa1384750:CDS |
| CTCCGACCCTGCTCGAAAAT+CGG | 0.312002 | tig0020679:+29266 | None:intergenic |
| GAACATGATTCAGGGCTTAA+AGG | 0.316444 | tig0020679:+31019 | None:intergenic |
| CGTGGCAGTTAGCGACAAAA+AGG | 0.325683 | tig0020679:-30576 | Msa1384750:CDS |
| AAGTAGGTTTACTCAGATAA+AGG | 0.325958 | tig0020679:-30819 | Msa1384750:CDS |
| AATGAGAGCTTTGTTGTAAC+TGG | 0.327015 | tig0020679:-30449 | Msa1384750:CDS |
| AACATGCCATCTCTTCGTTT+AGG | 0.327521 | tig0020679:+29204 | None:intergenic |
| TACGAAACCATCGCCGTAAT+AGG | 0.332437 | tig0020679:+30488 | None:intergenic |
| ACCTTTATAAATAGGTAGAT+TGG | 0.335847 | tig0020679:+29638 | None:intergenic |
| GGTTGAGTTTGATACTTTAT+TGG | 0.336771 | tig0020679:-30516 | Msa1384750:CDS |
| CAAATATAGGGCATCAACTA+TGG | 0.339411 | tig0020679:-29241 | Msa1384750:CDS |
| CTCTGAGAGCTCCACTTCTA+AGG | 0.342609 | tig0020679:+29400 | None:intergenic |
| GAATCATCCAACCCCAAGTT+TGG | 0.344833 | tig0020679:-29757 | Msa1384750:CDS |
| AAAATTATCACTATTTGCTT+TGG | 0.351578 | tig0020679:+30958 | None:intergenic |
| TCCCTTGGCATCATCTAGTT+CGG | 0.356192 | tig0020679:-29475 | Msa1384750:CDS |
| TGAAATCTCTCTGACCAAAA+AGG | 0.356568 | tig0020679:+30683 | None:intergenic |
| CTTGCTTCGTCATCCAAACT+TGG | 0.358616 | tig0020679:+29744 | None:intergenic |
| AACTTGGGGTTGGATGATTC+AGG | 0.362507 | tig0020679:+29760 | None:intergenic |
| ATCAGCATCTGGTGCTCCCT+TGG | 0.379867 | tig0020679:-29490 | Msa1384750:CDS |
| CTTGCCTTGCAAGCAATTAA+GGG | 0.383135 | tig0020679:-29906 | Msa1384750:CDS |
| TCCGACCCTGCTCGAAAATC+GGG | 0.383603 | tig0020679:+29267 | None:intergenic |
| CGAAGAGATGGCATGTTTGT+AGG | 0.385532 | tig0020679:-29198 | Msa1384750:CDS |
| CTCCTCATTATGTGAGAATC+GGG | 0.386713 | tig0020679:-29833 | Msa1384750:CDS |
| CTTGTTATTGTTGGCCTTGG+AGG | 0.394015 | tig0020679:-29684 | Msa1384750:CDS |
| CGTGAAAAGCTTGTTATTGT+TGG | 0.397360 | tig0020679:-29693 | Msa1384750:CDS |
| AGAAACTGGTGCAGGGTCAT+TGG | 0.398132 | tig0020679:-30135 | Msa1384750:CDS |
| CCCTTGGCATCATCTAGTTC+GGG | 0.401741 | tig0020679:-29474 | Msa1384750:CDS |
| TGCAGGGTCATTGGATTTAA+GGG | 0.401947 | tig0020679:-30126 | Msa1384750:CDS |
| TCTCCTCATTATGTGAGAAT+CGG | 0.413688 | tig0020679:-29834 | Msa1384750:CDS |
| TTAATTTATGTCTTGTTACT+TGG | 0.417557 | tig0020679:-29990 | Msa1384750:CDS |
| CAGGGTCGGAGATCAAATAT+AGG | 0.418410 | tig0020679:-29254 | Msa1384750:CDS |
| TTGCTTCGTCATCCAAACTT+GGG | 0.426551 | tig0020679:+29745 | None:intergenic |
| GATCCCTTGGCATCAGCATC+TGG | 0.428564 | tig0020679:-29501 | Msa1384750:CDS |
| TTTGAGGGGAAAGCTCAAAA+TGG | 0.432738 | tig0020679:-30743 | Msa1384750:CDS |
| TCAATGGCGGCATCACATAA+AGG | 0.434001 | tig0020679:-31100 | Msa1384750:CDS |
| AGTTGAAGATGTAGAATTTG+AGG | 0.438796 | tig0020679:-30759 | Msa1384750:CDS |
| GTAGGAGAGCCATACCTTCT+CGG | 0.439682 | tig0020679:+29366 | None:intergenic |
| GCTGATGCCAAGGGATCATC+TGG | 0.441468 | tig0020679:+29507 | None:intergenic |
| GTTGAAGATGTAGAATTTGA+GGG | 0.442685 | tig0020679:-30758 | Msa1384750:CDS |
| AACATGATTCAGGGCTTAAA+GGG | 0.444442 | tig0020679:+31020 | None:intergenic |
| ACCGAGCGTTCCAAGGCTTA+CGG | 0.446073 | tig0020679:-30032 | Msa1384750:CDS |
| AAGCTTGTTATTGTTGGCCT+TGG | 0.452927 | tig0020679:-29687 | Msa1384750:CDS |
| GAGAATCGGGGTGCCTCGTC+CGG | 0.453539 | tig0020679:-29820 | Msa1384750:CDS |
| AGGGATCGAGCGGAGAGGAT+TGG | 0.453805 | tig0020679:-30388 | Msa1384750:CDS |
| GAGCGGAGAGGATTGGAGTT+CGG | 0.454464 | tig0020679:-30381 | Msa1384750:CDS |
| TGGTTTGGCTATAACTTTGT+TGG | 0.455300 | tig0020679:-30309 | Msa1384750:CDS |
| TTGTAACTGGTCATGAAAAT+GGG | 0.458526 | tig0020679:-30436 | Msa1384750:CDS |
| AGTAGGTTTACTCAGATAAA+GGG | 0.466339 | tig0020679:-30818 | Msa1384750:CDS |
| GCTCCAGCAGGAAACCTTGT+AGG | 0.467929 | tig0020679:+29348 | None:intergenic |
| ATGTAATGAACTTCAAATGC+AGG | 0.472022 | tig0020679:-29965 | Msa1384750:CDS |
| AATGTTGATACATAGAGTTT+GGG | 0.473684 | tig0020679:-30411 | Msa1384750:CDS |
| GTTATTGTTGGCCTTGGAGG+TGG | 0.480940 | tig0020679:-29681 | Msa1384750:CDS |
| AAATCGGGATCAACCGAAGC+TGG | 0.485044 | tig0020679:+29282 | None:intergenic |
| TAGGTACTTGCTGCTCCAGC+AGG | 0.488751 | tig0020679:+29336 | None:intergenic |
| CCATACCTTCTCGGTGGTGG+TGG | 0.491401 | tig0020679:+29375 | None:intergenic |
| AAAAGTACGAAGAACAATAC+AGG | 0.493218 | tig0020679:+29588 | None:intergenic |
| CGATGCCACCGAGCGTTCCA+AGG | 0.498845 | tig0020679:-30039 | Msa1384750:CDS |
| ATCAGCAGAACCAAGTCTAT+AGG | 0.499473 | tig0020679:+29317 | None:intergenic |
| GGCCTTGGAGGTGGTTATGT+TGG | 0.500374 | tig0020679:-29672 | Msa1384750:CDS |
| GAGCCATACCTTCTCGGTGG+TGG | 0.500633 | tig0020679:+29372 | None:intergenic |
| ATTGTATTGAACATGATTCA+GGG | 0.502180 | tig0020679:+31011 | None:intergenic |
| AAGAACTTCTGCCGATGTCA+TGG | 0.502840 | tig0020679:-29424 | Msa1384750:CDS |
| TGAAAATCACGAGAATGGTT+TGG | 0.504411 | tig0020679:-30324 | Msa1384750:CDS |
| GGATCAACCGAAGCTGGCCT+AGG | 0.505610 | tig0020679:+29288 | None:intergenic |
| TTTGAGAAATGGTGATGTGT+TGG | 0.505711 | tig0020679:-30537 | Msa1384750:CDS |
| AGAAGGAAGCACTCACATCA+TGG | 0.507048 | tig0020679:-29533 | Msa1384750:CDS |
| ATATCCCTTAATTGCTTGCA+AGG | 0.508373 | tig0020679:+29902 | None:intergenic |
| TCACAATCCTAGGCCAGCTT+CGG | 0.513487 | tig0020679:-29295 | Msa1384750:CDS |
| CCACCACCACCGAGAAGGTA+TGG | 0.519438 | tig0020679:-29375 | Msa1384750:CDS |
| CTTAATCTTCCCACTAGTAT+CGG | 0.520642 | tig0020679:+30247 | None:intergenic |
| GTGAATTCAATACCATGCTA+TGG | 0.523841 | tig0020679:-29617 | Msa1384750:CDS |
| GTTCTGTCACTCCGAGTGCT+AGG | 0.526531 | tig0020679:-30196 | Msa1384750:CDS |
| GAAGGAAGCACTCACATCAT+GGG | 0.529484 | tig0020679:-29532 | Msa1384750:CDS |
| ACCGTAAGCCTTGGAACGCT+CGG | 0.530817 | tig0020679:+30031 | None:intergenic |
| TGACGTAAAACCGTAAGCCT+TGG | 0.532112 | tig0020679:+30022 | None:intergenic |
| TCGTCATCCAAACTTGGGGT+TGG | 0.534310 | tig0020679:+29750 | None:intergenic |
| ATGGGGACCAGATGATCCCT+TGG | 0.536773 | tig0020679:-29514 | Msa1384750:CDS |
| TGCTTCGTCATCCAAACTTG+GGG | 0.537547 | tig0020679:+29746 | None:intergenic |
| TCTCCTACAAGGTTTCCTGC+TGG | 0.544977 | tig0020679:-29351 | Msa1384750:CDS |
| AGGGTCGGAGATCAAATATA+GGG | 0.548832 | tig0020679:-29253 | Msa1384750:CDS |
| AGCACCAGATGCTGATGCCA+AGG | 0.549033 | tig0020679:+29497 | None:intergenic |
| TCACCTGAAAATCACGAGAA+TGG | 0.550569 | tig0020679:-30329 | Msa1384750:CDS |
| TCAATGCTTGAGGAGAAAAC+CGG | 0.551859 | tig0020679:+29801 | None:intergenic |
| GAAGGTATGGCTCTCCTACA+AGG | 0.552207 | tig0020679:-29362 | Msa1384750:CDS |
| ATCAAAACAACCACAGCAAG+AGG | 0.553985 | tig0020679:-30864 | Msa1384750:CDS |
| TTCAGAAACAGATTCATCGT+TGG | 0.554856 | tig0020679:+30982 | None:intergenic |
| GGATTCACCTATTACGGCGA+TGG | 0.555523 | tig0020679:-30495 | Msa1384750:CDS |
| CGAAAACATAACCTCTAGCA+AGG | 0.557604 | tig0020679:+30060 | None:intergenic |
| CATAACCTCTAGCAAGGGAA+TGG | 0.558567 | tig0020679:+30066 | None:intergenic |
| GCATCAACTATGGATCCTCC+TGG | 0.559135 | tig0020679:-29231 | Msa1384750:CDS |
| TCAAAATGGTGAGAGAGCTA+AGG | 0.560407 | tig0020679:-30729 | Msa1384750:CDS |
| CTTGAGGAGAAAACCGGACG+AGG | 0.564181 | tig0020679:+29807 | None:intergenic |
| AAAACTAACGGCCTAGCACT+CGG | 0.565802 | tig0020679:+30185 | None:intergenic |
| GTTCTGCTGATCACAATCCT+AGG | 0.568302 | tig0020679:-29305 | Msa1384750:CDS |
| CAAAATGGTGAGAGAGCTAA+GGG | 0.568442 | tig0020679:-30728 | Msa1384750:CDS |
| ATAAAGGGTGATGTTGATGA+TGG | 0.570149 | tig0020679:-30803 | Msa1384750:CDS |
| ACCCCGATTCTCACATAATG+AGG | 0.578251 | tig0020679:+29831 | None:intergenic |
| GTTGATACATAGAGTTTGGG+AGG | 0.579213 | tig0020679:-30408 | Msa1384750:CDS |
| ATTAGAGAATCTGAATGTGA+AGG | 0.582658 | tig0020679:-30095 | Msa1384750:CDS |
| GAAACAGATTCATCGTTGGA+TGG | 0.583904 | tig0020679:+30986 | None:intergenic |
| CTTTGCTTCAAGAAAACTAA+CGG | 0.587679 | tig0020679:+30173 | None:intergenic |
| TTGAACCATTCCCTTGCTAG+AGG | 0.588040 | tig0020679:-30071 | Msa1384750:CDS |
| ACCCGAACTAGATGATGCCA+AGG | 0.588300 | tig0020679:+29473 | None:intergenic |
| ACCACAGCAAGAGGTTCCTA+AGG | 0.591540 | tig0020679:-30855 | Msa1384750:CDS |
| TTAATTGCTTGCAAGGCAAG+AGG | 0.592530 | tig0020679:+29909 | None:intergenic |
| ACCTTAGGAACCTCTTGCTG+TGG | 0.596633 | tig0020679:+30854 | None:intergenic |
| ATTCTATCAGCCGATACTAG+TGG | 0.596692 | tig0020679:-30257 | Msa1384750:CDS |
| TTCTATCAGCCGATACTAGT+GGG | 0.601289 | tig0020679:-30256 | Msa1384750:CDS |
| TCTCTTCGTTTAGGGAAACC+AGG | 0.603540 | tig0020679:+29213 | None:intergenic |
| GCACCAGATGCTGATGCCAA+GGG | 0.603889 | tig0020679:+29498 | None:intergenic |
| GGTTTCCCTAAACGAAGAGA+TGG | 0.605902 | tig0020679:-29210 | Msa1384750:CDS |
| GCAGGGTCATTGGATTTAAG+GGG | 0.607326 | tig0020679:-30125 | Msa1384750:CDS |
| GATGTCATGGACCTTAGAAG+TGG | 0.608463 | tig0020679:-29411 | Msa1384750:CDS |
| GCAGCAAGTACCTATAGACT+TGG | 0.614298 | tig0020679:-29327 | Msa1384750:CDS |
| GAGGTCCACCACCACCGAGA+AGG | 0.615042 | tig0020679:-29380 | Msa1384750:CDS |
| TTGAAGATGTAGAATTTGAG+GGG | 0.616749 | tig0020679:-30757 | Msa1384750:CDS |
| TCTAAGCTCATCAATGCTTG+AGG | 0.624847 | tig0020679:+29791 | None:intergenic |
| ACTTCTAAGGTCCATGACAT+CGG | 0.628592 | tig0020679:+29413 | None:intergenic |
| AGAGTTTGGGAGGGATCGAG+CGG | 0.630495 | tig0020679:-30398 | Msa1384750:CDS |
| TTCCAACATAACCACCTCCA+AGG | 0.632050 | tig0020679:+29670 | None:intergenic |
| TGTAATGAACTTCAAATGCA+GGG | 0.635592 | tig0020679:-29964 | Msa1384750:CDS |
| TCACGGTCACTAGCTATCAA+CGG | 0.636430 | tig0020679:+29711 | None:intergenic |
| GAAAACATAACCTCTAGCAA+GGG | 0.636680 | tig0020679:+30061 | None:intergenic |
| TTGATACATAGAGTTTGGGA+GGG | 0.638448 | tig0020679:-30407 | Msa1384750:CDS |
| TACAGGACTAGTCCATAGCA+TGG | 0.656922 | tig0020679:+29605 | None:intergenic |
| AAGGAAGCACTCACATCATG+GGG | 0.666753 | tig0020679:-29531 | Msa1384750:CDS |
| CTTAGAAGTGGAGCTCTCAG+AGG | 0.667229 | tig0020679:-29399 | Msa1384750:CDS |
| TGTAACTGGTCATGAAAATG+GGG | 0.671239 | tig0020679:-30435 | Msa1384750:CDS |
| GTAAGCCTTGGAACGCTCGG+TGG | 0.678495 | tig0020679:+30034 | None:intergenic |
| TTGGGAGGGATCGAGCGGAG+AGG | 0.684923 | tig0020679:-30393 | Msa1384750:CDS |
| TCCTCATTATGTGAGAATCG+GGG | 0.695613 | tig0020679:-29832 | Msa1384750:CDS |
| CCCGAACTAGATGATGCCAA+GGG | 0.697441 | tig0020679:+29474 | None:intergenic |
| GGAGAGCCATACCTTCTCGG+TGG | 0.704913 | tig0020679:+29369 | None:intergenic |
| TGAAGGGTTAAGTAAGTACG+TGG | 0.708391 | tig0020679:-30594 | Msa1384750:CDS |
| CTTCGTTTAGGGAAACCAGG+AGG | 0.758900 | tig0020679:+29216 | None:intergenic |
| GTAACTGGTCATGAAAATGG+GGG | 0.767450 | tig0020679:-30434 | Msa1384750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTATCACTATTTGCTT+TGG | + | tig0020679:29312-29331 | None:intergenic | 20.0% |
| !!! | TATAAATGTTTTGCCTTTTA+AGG | - | tig0020679:29646-29665 | Msa1384750:CDS | 20.0% |
| !!! | TTAATTTATGTCTTGTTACT+TGG | - | tig0020679:30277-30296 | Msa1384750:CDS | 20.0% |
| !! | ATACAAGAAAAAGTTTGAAA+TGG | - | tig0020679:30330-30349 | Msa1384750:CDS | 20.0% |
| !!! | TAAACACAAAAACCTTTTTA+GGG | + | tig0020679:30405-30424 | None:intergenic | 20.0% |
| !!! | TTAAACACAAAAACCTTTTT+AGG | + | tig0020679:30406-30425 | None:intergenic | 20.0% |
| !! | TTGAATTCACCTTTATAAAT+AGG | + | tig0020679:30640-30659 | None:intergenic | 20.0% |
| !! | AAAATTATCACTATTTGCTT+TGG | + | tig0020679:29312-29331 | None:intergenic | 20.0% |
| !!! | TATAAATGTTTTGCCTTTTA+AGG | - | tig0020679:29646-29665 | Msa1384750:CDS | 20.0% |
| !!! | TTAATTTATGTCTTGTTACT+TGG | - | tig0020679:30277-30296 | Msa1384750:CDS | 20.0% |
| !! | ATACAAGAAAAAGTTTGAAA+TGG | - | tig0020679:30330-30349 | Msa1384750:CDS | 20.0% |
| !!! | TAAACACAAAAACCTTTTTA+GGG | + | tig0020679:30405-30424 | None:intergenic | 20.0% |
| !!! | TTAAACACAAAAACCTTTTT+AGG | + | tig0020679:30406-30425 | None:intergenic | 20.0% |
| !! | TTGAATTCACCTTTATAAAT+AGG | + | tig0020679:30640-30659 | None:intergenic | 20.0% |
| !! | CAAGATTTTTATCTTCTGTT+TGG | - | tig0020679:29190-29209 | Msa1384750:CDS | 25.0% |
| ! | ATTGTATTGAACATGATTCA+GGG | + | tig0020679:29259-29278 | None:intergenic | 25.0% |
| ! | TTTATTGGATTCACCTATTA+CGG | - | tig0020679:29766-29785 | Msa1384750:CDS | 25.0% |
| ! | AATGTTGATACATAGAGTTT+GGG | - | tig0020679:29856-29875 | Msa1384750:CDS | 25.0% |
| ! | TCCAATCTACCTATTTATAA+AGG | - | tig0020679:30628-30647 | Msa1384750:CDS | 25.0% |
| ! | ACCTTTATAAATAGGTAGAT+TGG | + | tig0020679:30632-30651 | None:intergenic | 25.0% |
| !! | CAAGATTTTTATCTTCTGTT+TGG | - | tig0020679:29190-29209 | Msa1384750:CDS | 25.0% |
| ! | ATTGTATTGAACATGATTCA+GGG | + | tig0020679:29259-29278 | None:intergenic | 25.0% |
| ! | TTTATTGGATTCACCTATTA+CGG | - | tig0020679:29766-29785 | Msa1384750:CDS | 25.0% |
| ! | AATGTTGATACATAGAGTTT+GGG | - | tig0020679:29856-29875 | Msa1384750:CDS | 25.0% |
| ! | TCCAATCTACCTATTTATAA+AGG | - | tig0020679:30628-30647 | Msa1384750:CDS | 25.0% |
| ! | ACCTTTATAAATAGGTAGAT+TGG | + | tig0020679:30632-30651 | None:intergenic | 25.0% |
| GATTGTATTGAACATGATTC+AGG | + | tig0020679:29260-29279 | None:intergenic | 30.0% | |
| !!! | CTTTTTTCTTGAACAACCTT+AGG | + | tig0020679:29431-29450 | None:intergenic | 30.0% |
| AGGTTGTTCAAGAAAAAAGT+AGG | - | tig0020679:29432-29451 | Msa1384750:CDS | 30.0% | |
| AAGTAGGTTTACTCAGATAA+AGG | - | tig0020679:29448-29467 | Msa1384750:CDS | 30.0% | |
| AGTAGGTTTACTCAGATAAA+GGG | - | tig0020679:29449-29468 | Msa1384750:CDS | 30.0% | |
| AGTTGAAGATGTAGAATTTG+AGG | - | tig0020679:29508-29527 | Msa1384750:CDS | 30.0% | |
| GTTGAAGATGTAGAATTTGA+GGG | - | tig0020679:29509-29528 | Msa1384750:CDS | 30.0% | |
| TTGAAGATGTAGAATTTGAG+GGG | - | tig0020679:29510-29529 | Msa1384750:CDS | 30.0% | |
| !! | GTTTACGTGTTTTTGAGAAA+TGG | - | tig0020679:29719-29738 | Msa1384750:CDS | 30.0% |
| GGTTGAGTTTGATACTTTAT+TGG | - | tig0020679:29751-29770 | Msa1384750:CDS | 30.0% | |
| TTGTAACTGGTCATGAAAAT+GGG | - | tig0020679:29831-29850 | Msa1384750:CDS | 30.0% | |
| GAATGTTGATACATAGAGTT+TGG | - | tig0020679:29855-29874 | Msa1384750:CDS | 30.0% | |
| ! | TCGGTTTTTATGGAAAATGT+CGG | - | tig0020679:29905-29924 | Msa1384750:CDS | 30.0% |
| ! | TTGTTGGAAGTTCATTTTGT+AGG | - | tig0020679:29974-29993 | Msa1384750:CDS | 30.0% |
| ! | TGTTGGAAGTTCATTTTGTA+GGG | - | tig0020679:29975-29994 | Msa1384750:CDS | 30.0% |
| ! | TGGGAAGATTAAGGTTTTTA+AGG | - | tig0020679:30030-30049 | Msa1384750:CDS | 30.0% |
| CTTTGCTTCAAGAAAACTAA+CGG | + | tig0020679:30097-30116 | None:intergenic | 30.0% | |
| !! | CTTATGTTTTTGACAGAAAC+TGG | - | tig0020679:30118-30137 | Msa1384750:CDS | 30.0% |
| ATTAGAGAATCTGAATGTGA+AGG | - | tig0020679:30172-30191 | Msa1384750:CDS | 30.0% | |
| ATGTAATGAACTTCAAATGC+AGG | - | tig0020679:30302-30321 | Msa1384750:CDS | 30.0% | |
| TGTAATGAACTTCAAATGCA+GGG | - | tig0020679:30303-30322 | Msa1384750:CDS | 30.0% | |
| GCTTATTGTTAACCCTAAAA+AGG | - | tig0020679:30390-30409 | Msa1384750:CDS | 30.0% | |
| ! | CAACAATAACAAGCTTTTCA+CGG | + | tig0020679:30576-30595 | None:intergenic | 30.0% |
| ! | AAAAGTACGAAGAACAATAC+AGG | + | tig0020679:30682-30701 | None:intergenic | 30.0% |
| ! | TTCTTCGTACTTTTCCTATT+CGG | - | tig0020679:30688-30707 | Msa1384750:CDS | 30.0% |
| GATTGTATTGAACATGATTC+AGG | + | tig0020679:29260-29279 | None:intergenic | 30.0% | |
| !!! | CTTTTTTCTTGAACAACCTT+AGG | + | tig0020679:29431-29450 | None:intergenic | 30.0% |
| AGGTTGTTCAAGAAAAAAGT+AGG | - | tig0020679:29432-29451 | Msa1384750:CDS | 30.0% | |
| AAGTAGGTTTACTCAGATAA+AGG | - | tig0020679:29448-29467 | Msa1384750:CDS | 30.0% | |
| AGTAGGTTTACTCAGATAAA+GGG | - | tig0020679:29449-29468 | Msa1384750:CDS | 30.0% | |
| AGTTGAAGATGTAGAATTTG+AGG | - | tig0020679:29508-29527 | Msa1384750:CDS | 30.0% | |
| GTTGAAGATGTAGAATTTGA+GGG | - | tig0020679:29509-29528 | Msa1384750:CDS | 30.0% | |
| TTGAAGATGTAGAATTTGAG+GGG | - | tig0020679:29510-29529 | Msa1384750:CDS | 30.0% | |
| !! | GTTTACGTGTTTTTGAGAAA+TGG | - | tig0020679:29719-29738 | Msa1384750:CDS | 30.0% |
| GGTTGAGTTTGATACTTTAT+TGG | - | tig0020679:29751-29770 | Msa1384750:CDS | 30.0% | |
| TTGTAACTGGTCATGAAAAT+GGG | - | tig0020679:29831-29850 | Msa1384750:CDS | 30.0% | |
| GAATGTTGATACATAGAGTT+TGG | - | tig0020679:29855-29874 | Msa1384750:CDS | 30.0% | |
| ! | TCGGTTTTTATGGAAAATGT+CGG | - | tig0020679:29905-29924 | Msa1384750:CDS | 30.0% |
| ! | TTGTTGGAAGTTCATTTTGT+AGG | - | tig0020679:29974-29993 | Msa1384750:CDS | 30.0% |
| ! | TGTTGGAAGTTCATTTTGTA+GGG | - | tig0020679:29975-29994 | Msa1384750:CDS | 30.0% |
| ! | TGGGAAGATTAAGGTTTTTA+AGG | - | tig0020679:30030-30049 | Msa1384750:CDS | 30.0% |
| CTTTGCTTCAAGAAAACTAA+CGG | + | tig0020679:30097-30116 | None:intergenic | 30.0% | |
| !! | CTTATGTTTTTGACAGAAAC+TGG | - | tig0020679:30118-30137 | Msa1384750:CDS | 30.0% |
| ATTAGAGAATCTGAATGTGA+AGG | - | tig0020679:30172-30191 | Msa1384750:CDS | 30.0% | |
| ATGTAATGAACTTCAAATGC+AGG | - | tig0020679:30302-30321 | Msa1384750:CDS | 30.0% | |
| TGTAATGAACTTCAAATGCA+GGG | - | tig0020679:30303-30322 | Msa1384750:CDS | 30.0% | |
| GCTTATTGTTAACCCTAAAA+AGG | - | tig0020679:30390-30409 | Msa1384750:CDS | 30.0% | |
| ! | CAACAATAACAAGCTTTTCA+CGG | + | tig0020679:30576-30595 | None:intergenic | 30.0% |
| ! | AAAAGTACGAAGAACAATAC+AGG | + | tig0020679:30682-30701 | None:intergenic | 30.0% |
| ! | TTCTTCGTACTTTTCCTATT+CGG | - | tig0020679:30688-30707 | Msa1384750:CDS | 30.0% |
| AACATGATTCAGGGCTTAAA+GGG | + | tig0020679:29250-29269 | None:intergenic | 35.0% | |
| TTCAGAAACAGATTCATCGT+TGG | + | tig0020679:29288-29307 | None:intergenic | 35.0% | |
| ! | ATAAAGGGTGATGTTGATGA+TGG | - | tig0020679:29464-29483 | Msa1384750:CDS | 35.0% |
| ! | TGACCAAGTATACTCCTTTT+TGG | - | tig0020679:29570-29589 | Msa1384750:CDS | 35.0% |
| ! | TGACCAAAAAGGAGTATACT+TGG | + | tig0020679:29576-29595 | None:intergenic | 35.0% |
| TGAAATCTCTCTGACCAAAA+AGG | + | tig0020679:29587-29606 | None:intergenic | 35.0% | |
| ATTTGCATCTGCTGTGAAAT+TGG | - | tig0020679:29607-29626 | Msa1384750:CDS | 35.0% | |
| !! | TTGCCTTTTAAGGATCATGA+AGG | - | tig0020679:29656-29675 | Msa1384750:CDS | 35.0% |
| !! | TGCCTTTTAAGGATCATGAA+GGG | - | tig0020679:29657-29676 | Msa1384750:CDS | 35.0% |
| AACCCTTCATGATCCTTAAA+AGG | + | tig0020679:29662-29681 | None:intergenic | 35.0% | |
| ! | TTTGAGAAATGGTGATGTGT+TGG | - | tig0020679:29730-29749 | Msa1384750:CDS | 35.0% |
| !! | AATGAGAGCTTTGTTGTAAC+TGG | - | tig0020679:29818-29837 | Msa1384750:CDS | 35.0% |
| GTTGTAACTGGTCATGAAAA+TGG | - | tig0020679:29830-29849 | Msa1384750:CDS | 35.0% | |
| TGTAACTGGTCATGAAAATG+GGG | - | tig0020679:29832-29851 | Msa1384750:CDS | 35.0% | |
| TTGATACATAGAGTTTGGGA+GGG | - | tig0020679:29860-29879 | Msa1384750:CDS | 35.0% | |
| ! | AAACCATTCTCGTGATTTTC+AGG | + | tig0020679:29944-29963 | None:intergenic | 35.0% |
| TGAAAATCACGAGAATGGTT+TGG | - | tig0020679:29943-29962 | Msa1384750:CDS | 35.0% | |
| ! | TGGTTTGGCTATAACTTTGT+TGG | - | tig0020679:29958-29977 | Msa1384750:CDS | 35.0% |
| CTTAATCTTCCCACTAGTAT+CGG | + | tig0020679:30023-30042 | None:intergenic | 35.0% | |
| ! | AAGGAAAGCAGTGTGTTTTA+TGG | - | tig0020679:30049-30068 | Msa1384750:CDS | 35.0% |
| !!! | CGTTAGTTTTCTTGAAGCAA+AGG | - | tig0020679:30095-30114 | Msa1384750:CDS | 35.0% |
| GAAAACATAACCTCTAGCAA+GGG | + | tig0020679:30209-30228 | None:intergenic | 35.0% | |
| ATATCCCTTAATTGCTTGCA+AGG | + | tig0020679:30368-30387 | None:intergenic | 35.0% | |
| TCTCCTCATTATGTGAGAAT+CGG | - | tig0020679:30433-30452 | Msa1384750:CDS | 35.0% | |
| !! | CGTGAAAAGCTTGTTATTGT+TGG | - | tig0020679:30574-30593 | Msa1384750:CDS | 35.0% |
| GTGAATTCAATACCATGCTA+TGG | - | tig0020679:30650-30669 | Msa1384750:CDS | 35.0% | |
| ! | CAAATATAGGGCATCAACTA+TGG | - | tig0020679:31026-31045 | Msa1384750:CDS | 35.0% |
| AACATGATTCAGGGCTTAAA+GGG | + | tig0020679:29250-29269 | None:intergenic | 35.0% | |
| TTCAGAAACAGATTCATCGT+TGG | + | tig0020679:29288-29307 | None:intergenic | 35.0% | |
| ! | ATAAAGGGTGATGTTGATGA+TGG | - | tig0020679:29464-29483 | Msa1384750:CDS | 35.0% |
| ! | TGACCAAGTATACTCCTTTT+TGG | - | tig0020679:29570-29589 | Msa1384750:CDS | 35.0% |
| ! | TGACCAAAAAGGAGTATACT+TGG | + | tig0020679:29576-29595 | None:intergenic | 35.0% |
| TGAAATCTCTCTGACCAAAA+AGG | + | tig0020679:29587-29606 | None:intergenic | 35.0% | |
| ATTTGCATCTGCTGTGAAAT+TGG | - | tig0020679:29607-29626 | Msa1384750:CDS | 35.0% | |
| !! | TTGCCTTTTAAGGATCATGA+AGG | - | tig0020679:29656-29675 | Msa1384750:CDS | 35.0% |
| !! | TGCCTTTTAAGGATCATGAA+GGG | - | tig0020679:29657-29676 | Msa1384750:CDS | 35.0% |
| AACCCTTCATGATCCTTAAA+AGG | + | tig0020679:29662-29681 | None:intergenic | 35.0% | |
| ! | TTTGAGAAATGGTGATGTGT+TGG | - | tig0020679:29730-29749 | Msa1384750:CDS | 35.0% |
| !! | AATGAGAGCTTTGTTGTAAC+TGG | - | tig0020679:29818-29837 | Msa1384750:CDS | 35.0% |
| GTTGTAACTGGTCATGAAAA+TGG | - | tig0020679:29830-29849 | Msa1384750:CDS | 35.0% | |
| TGTAACTGGTCATGAAAATG+GGG | - | tig0020679:29832-29851 | Msa1384750:CDS | 35.0% | |
| TTGATACATAGAGTTTGGGA+GGG | - | tig0020679:29860-29879 | Msa1384750:CDS | 35.0% | |
| ! | AAACCATTCTCGTGATTTTC+AGG | + | tig0020679:29944-29963 | None:intergenic | 35.0% |
| TGAAAATCACGAGAATGGTT+TGG | - | tig0020679:29943-29962 | Msa1384750:CDS | 35.0% | |
| ! | TGGTTTGGCTATAACTTTGT+TGG | - | tig0020679:29958-29977 | Msa1384750:CDS | 35.0% |
| CTTAATCTTCCCACTAGTAT+CGG | + | tig0020679:30023-30042 | None:intergenic | 35.0% | |
| ! | AAGGAAAGCAGTGTGTTTTA+TGG | - | tig0020679:30049-30068 | Msa1384750:CDS | 35.0% |
| !!! | CGTTAGTTTTCTTGAAGCAA+AGG | - | tig0020679:30095-30114 | Msa1384750:CDS | 35.0% |
| GAAAACATAACCTCTAGCAA+GGG | + | tig0020679:30209-30228 | None:intergenic | 35.0% | |
| ATATCCCTTAATTGCTTGCA+AGG | + | tig0020679:30368-30387 | None:intergenic | 35.0% | |
| TCTCCTCATTATGTGAGAAT+CGG | - | tig0020679:30433-30452 | Msa1384750:CDS | 35.0% | |
| !! | CGTGAAAAGCTTGTTATTGT+TGG | - | tig0020679:30574-30593 | Msa1384750:CDS | 35.0% |
| GTGAATTCAATACCATGCTA+TGG | - | tig0020679:30650-30669 | Msa1384750:CDS | 35.0% | |
| ! | CAAATATAGGGCATCAACTA+TGG | - | tig0020679:31026-31045 | Msa1384750:CDS | 35.0% |
| GAACATGATTCAGGGCTTAA+AGG | + | tig0020679:29251-29270 | None:intergenic | 40.0% | |
| GAAACAGATTCATCGTTGGA+TGG | + | tig0020679:29284-29303 | None:intergenic | 40.0% | |
| ATCAAAACAACCACAGCAAG+AGG | - | tig0020679:29403-29422 | Msa1384750:CDS | 40.0% | |
| TTTGAGGGGAAAGCTCAAAA+TGG | - | tig0020679:29524-29543 | Msa1384750:CDS | 40.0% | |
| TCAAAATGGTGAGAGAGCTA+AGG | - | tig0020679:29538-29557 | Msa1384750:CDS | 40.0% | |
| CAAAATGGTGAGAGAGCTAA+GGG | - | tig0020679:29539-29558 | Msa1384750:CDS | 40.0% | |
| TGAAGGGTTAAGTAAGTACG+TGG | - | tig0020679:29673-29692 | Msa1384750:CDS | 40.0% | |
| GTAACTGGTCATGAAAATGG+GGG | - | tig0020679:29833-29852 | Msa1384750:CDS | 40.0% | |
| GTTGATACATAGAGTTTGGG+AGG | - | tig0020679:29859-29878 | Msa1384750:CDS | 40.0% | |
| ! | GGATTGGAGTTCGGTTTTTA+TGG | - | tig0020679:29895-29914 | Msa1384750:CDS | 40.0% |
| TCACCTGAAAATCACGAGAA+TGG | - | tig0020679:29938-29957 | Msa1384750:CDS | 40.0% | |
| ! | TGGAAGTTCATTTTGTAGGG+AGG | - | tig0020679:29978-29997 | Msa1384750:CDS | 40.0% |
| ATTCTATCAGCCGATACTAG+TGG | - | tig0020679:30010-30029 | Msa1384750:CDS | 40.0% | |
| TTCTATCAGCCGATACTAGT+GGG | - | tig0020679:30011-30030 | Msa1384750:CDS | 40.0% | |
| CGATACTAGTGGGAAGATTA+AGG | - | tig0020679:30021-30040 | Msa1384750:CDS | 40.0% | |
| ! | TTTTTGACAGAAACTGGTGC+AGG | - | tig0020679:30124-30143 | Msa1384750:CDS | 40.0% |
| ! | TTTTGACAGAAACTGGTGCA+GGG | - | tig0020679:30125-30144 | Msa1384750:CDS | 40.0% |
| TGCAGGGTCATTGGATTTAA+GGG | - | tig0020679:30141-30160 | Msa1384750:CDS | 40.0% | |
| CGAAAACATAACCTCTAGCA+AGG | + | tig0020679:30210-30229 | None:intergenic | 40.0% | |
| TTAATTGCTTGCAAGGCAAG+AGG | + | tig0020679:30361-30380 | None:intergenic | 40.0% | |
| TCTTGCCTTGCAAGCAATTA+AGG | - | tig0020679:30360-30379 | Msa1384750:CDS | 40.0% | |
| CTTGCCTTGCAAGCAATTAA+GGG | - | tig0020679:30361-30380 | Msa1384750:CDS | 40.0% | |
| CTCCTCATTATGTGAGAATC+GGG | - | tig0020679:30434-30453 | Msa1384750:CDS | 40.0% | |
| TCCTCATTATGTGAGAATCG+GGG | - | tig0020679:30435-30454 | Msa1384750:CDS | 40.0% | |
| TCAATGCTTGAGGAGAAAAC+CGG | + | tig0020679:30469-30488 | None:intergenic | 40.0% | |
| TCTAAGCTCATCAATGCTTG+AGG | + | tig0020679:30479-30498 | None:intergenic | 40.0% | |
| TTGCTTCGTCATCCAAACTT+GGG | + | tig0020679:30525-30544 | None:intergenic | 40.0% | |
| !! | AAGCTTGTTATTGTTGGCCT+TGG | - | tig0020679:30580-30599 | Msa1384750:CDS | 40.0% |
| !!! | TACTTTTCCTATTCGGTGCT+TGG | - | tig0020679:30695-30714 | Msa1384750:CDS | 40.0% |
| !! | AAAAATGCCAAGCACCGAAT+AGG | + | tig0020679:30705-30724 | None:intergenic | 40.0% |
| !!! | GCATTTTTTCGCCAAGAAGA+AGG | - | tig0020679:30717-30736 | Msa1384750:CDS | 40.0% |
| !! | ACTTCTAAGGTCCATGACAT+CGG | + | tig0020679:30857-30876 | None:intergenic | 40.0% |
| ATCAGCAGAACCAAGTCTAT+AGG | + | tig0020679:30953-30972 | None:intergenic | 40.0% | |
| AGGGTCGGAGATCAAATATA+GGG | - | tig0020679:31014-31033 | Msa1384750:CDS | 40.0% | |
| ACATGCCATCTCTTCGTTTA+GGG | + | tig0020679:31065-31084 | None:intergenic | 40.0% | |
| AACATGCCATCTCTTCGTTT+AGG | + | tig0020679:31066-31085 | None:intergenic | 40.0% | |
| GAACATGATTCAGGGCTTAA+AGG | + | tig0020679:29251-29270 | None:intergenic | 40.0% | |
| GAAACAGATTCATCGTTGGA+TGG | + | tig0020679:29284-29303 | None:intergenic | 40.0% | |
| ATCAAAACAACCACAGCAAG+AGG | - | tig0020679:29403-29422 | Msa1384750:CDS | 40.0% | |
| TTTGAGGGGAAAGCTCAAAA+TGG | - | tig0020679:29524-29543 | Msa1384750:CDS | 40.0% | |
| TCAAAATGGTGAGAGAGCTA+AGG | - | tig0020679:29538-29557 | Msa1384750:CDS | 40.0% | |
| CAAAATGGTGAGAGAGCTAA+GGG | - | tig0020679:29539-29558 | Msa1384750:CDS | 40.0% | |
| TGAAGGGTTAAGTAAGTACG+TGG | - | tig0020679:29673-29692 | Msa1384750:CDS | 40.0% | |
| GTAACTGGTCATGAAAATGG+GGG | - | tig0020679:29833-29852 | Msa1384750:CDS | 40.0% | |
| GTTGATACATAGAGTTTGGG+AGG | - | tig0020679:29859-29878 | Msa1384750:CDS | 40.0% | |
| ! | GGATTGGAGTTCGGTTTTTA+TGG | - | tig0020679:29895-29914 | Msa1384750:CDS | 40.0% |
| TCACCTGAAAATCACGAGAA+TGG | - | tig0020679:29938-29957 | Msa1384750:CDS | 40.0% | |
| ! | TGGAAGTTCATTTTGTAGGG+AGG | - | tig0020679:29978-29997 | Msa1384750:CDS | 40.0% |
| ATTCTATCAGCCGATACTAG+TGG | - | tig0020679:30010-30029 | Msa1384750:CDS | 40.0% | |
| TTCTATCAGCCGATACTAGT+GGG | - | tig0020679:30011-30030 | Msa1384750:CDS | 40.0% | |
| CGATACTAGTGGGAAGATTA+AGG | - | tig0020679:30021-30040 | Msa1384750:CDS | 40.0% | |
| ! | TTTTTGACAGAAACTGGTGC+AGG | - | tig0020679:30124-30143 | Msa1384750:CDS | 40.0% |
| ! | TTTTGACAGAAACTGGTGCA+GGG | - | tig0020679:30125-30144 | Msa1384750:CDS | 40.0% |
| TGCAGGGTCATTGGATTTAA+GGG | - | tig0020679:30141-30160 | Msa1384750:CDS | 40.0% | |
| CGAAAACATAACCTCTAGCA+AGG | + | tig0020679:30210-30229 | None:intergenic | 40.0% | |
| TTAATTGCTTGCAAGGCAAG+AGG | + | tig0020679:30361-30380 | None:intergenic | 40.0% | |
| TCTTGCCTTGCAAGCAATTA+AGG | - | tig0020679:30360-30379 | Msa1384750:CDS | 40.0% | |
| CTTGCCTTGCAAGCAATTAA+GGG | - | tig0020679:30361-30380 | Msa1384750:CDS | 40.0% | |
| CTCCTCATTATGTGAGAATC+GGG | - | tig0020679:30434-30453 | Msa1384750:CDS | 40.0% | |
| TCCTCATTATGTGAGAATCG+GGG | - | tig0020679:30435-30454 | Msa1384750:CDS | 40.0% | |
| TCAATGCTTGAGGAGAAAAC+CGG | + | tig0020679:30469-30488 | None:intergenic | 40.0% | |
| TCTAAGCTCATCAATGCTTG+AGG | + | tig0020679:30479-30498 | None:intergenic | 40.0% | |
| TTGCTTCGTCATCCAAACTT+GGG | + | tig0020679:30525-30544 | None:intergenic | 40.0% | |
| !! | AAGCTTGTTATTGTTGGCCT+TGG | - | tig0020679:30580-30599 | Msa1384750:CDS | 40.0% |
| !!! | TACTTTTCCTATTCGGTGCT+TGG | - | tig0020679:30695-30714 | Msa1384750:CDS | 40.0% |
| !! | AAAAATGCCAAGCACCGAAT+AGG | + | tig0020679:30705-30724 | None:intergenic | 40.0% |
| !!! | GCATTTTTTCGCCAAGAAGA+AGG | - | tig0020679:30717-30736 | Msa1384750:CDS | 40.0% |
| !! | ACTTCTAAGGTCCATGACAT+CGG | + | tig0020679:30857-30876 | None:intergenic | 40.0% |
| ATCAGCAGAACCAAGTCTAT+AGG | + | tig0020679:30953-30972 | None:intergenic | 40.0% | |
| AGGGTCGGAGATCAAATATA+GGG | - | tig0020679:31014-31033 | Msa1384750:CDS | 40.0% | |
| ACATGCCATCTCTTCGTTTA+GGG | + | tig0020679:31065-31084 | None:intergenic | 40.0% | |
| AACATGCCATCTCTTCGTTT+AGG | + | tig0020679:31066-31085 | None:intergenic | 40.0% | |
| GTGGCAGTTAGCGACAAAAA+GGG | - | tig0020679:29692-29711 | Msa1384750:CDS | 45.0% | |
| TACGAAACCATCGCCGTAAT+AGG | + | tig0020679:29782-29801 | None:intergenic | 45.0% | |
| AAAACTAACGGCCTAGCACT+CGG | + | tig0020679:30085-30104 | None:intergenic | 45.0% | |
| GTGCAGGGTCATTGGATTTA+AGG | - | tig0020679:30140-30159 | Msa1384750:CDS | 45.0% | |
| GCAGGGTCATTGGATTTAAG+GGG | - | tig0020679:30142-30161 | Msa1384750:CDS | 45.0% | |
| TTGAACCATTCCCTTGCTAG+AGG | - | tig0020679:30196-30215 | Msa1384750:CDS | 45.0% | |
| CATAACCTCTAGCAAGGGAA+TGG | + | tig0020679:30204-30223 | None:intergenic | 45.0% | |
| TGACGTAAAACCGTAAGCCT+TGG | + | tig0020679:30248-30267 | None:intergenic | 45.0% | |
| ! | GCTTACGGTTTTACGTCAGA+TGG | - | tig0020679:30250-30269 | Msa1384750:CDS | 45.0% |
| ACCCCGATTCTCACATAATG+AGG | + | tig0020679:30439-30458 | None:intergenic | 45.0% | |
| AACTTGGGGTTGGATGATTC+AGG | + | tig0020679:30510-30529 | None:intergenic | 45.0% | |
| GAATCATCCAACCCCAAGTT+TGG | - | tig0020679:30510-30529 | Msa1384750:CDS | 45.0% | |
| TGCTTCGTCATCCAAACTTG+GGG | + | tig0020679:30524-30543 | None:intergenic | 45.0% | |
| CTTGCTTCGTCATCCAAACT+TGG | + | tig0020679:30526-30545 | None:intergenic | 45.0% | |
| TCACGGTCACTAGCTATCAA+CGG | + | tig0020679:30559-30578 | None:intergenic | 45.0% | |
| !! | CTTGTTATTGTTGGCCTTGG+AGG | - | tig0020679:30583-30602 | Msa1384750:CDS | 45.0% |
| TTCCAACATAACCACCTCCA+AGG | + | tig0020679:30600-30619 | None:intergenic | 45.0% | |
| !! | TACAGGACTAGTCCATAGCA+TGG | + | tig0020679:30665-30684 | None:intergenic | 45.0% |
| TGTGAGTGCTTCCTTCTTCT+TGG | + | tig0020679:30731-30750 | None:intergenic | 45.0% | |
| !! | AGAAGGAAGCACTCACATCA+TGG | - | tig0020679:30734-30753 | Msa1384750:CDS | 45.0% |
| !! | GAAGGAAGCACTCACATCAT+GGG | - | tig0020679:30735-30754 | Msa1384750:CDS | 45.0% |
| !! | AAGGAAGCACTCACATCATG+GGG | - | tig0020679:30736-30755 | Msa1384750:CDS | 45.0% |
| TCCCTTGGCATCATCTAGTT+CGG | - | tig0020679:30792-30811 | Msa1384750:CDS | 45.0% | |
| AAGAACTTCTGCCGATGTCA+TGG | - | tig0020679:30843-30862 | Msa1384750:CDS | 45.0% | |
| GATGTCATGGACCTTAGAAG+TGG | - | tig0020679:30856-30875 | Msa1384750:CDS | 45.0% | |
| GCAGCAAGTACCTATAGACT+TGG | - | tig0020679:30940-30959 | Msa1384750:CDS | 45.0% | |
| GTTCTGCTGATCACAATCCT+AGG | - | tig0020679:30962-30981 | Msa1384750:CDS | 45.0% | |
| !! | TTGATCCCGATTTTCGAGCA+GGG | - | tig0020679:30995-31014 | Msa1384750:CDS | 45.0% |
| CAGGGTCGGAGATCAAATAT+AGG | - | tig0020679:31013-31032 | Msa1384750:CDS | 45.0% | |
| TCTCTTCGTTTAGGGAAACC+AGG | + | tig0020679:31057-31076 | None:intergenic | 45.0% | |
| GGTTTCCCTAAACGAAGAGA+TGG | - | tig0020679:31057-31076 | Msa1384750:CDS | 45.0% | |
| CGAAGAGATGGCATGTTTGT+AGG | - | tig0020679:31069-31088 | Msa1384750:CDS | 45.0% | |
| GTGGCAGTTAGCGACAAAAA+GGG | - | tig0020679:29692-29711 | Msa1384750:CDS | 45.0% | |
| TACGAAACCATCGCCGTAAT+AGG | + | tig0020679:29782-29801 | None:intergenic | 45.0% | |
| AAAACTAACGGCCTAGCACT+CGG | + | tig0020679:30085-30104 | None:intergenic | 45.0% | |
| GTGCAGGGTCATTGGATTTA+AGG | - | tig0020679:30140-30159 | Msa1384750:CDS | 45.0% | |
| GCAGGGTCATTGGATTTAAG+GGG | - | tig0020679:30142-30161 | Msa1384750:CDS | 45.0% | |
| TTGAACCATTCCCTTGCTAG+AGG | - | tig0020679:30196-30215 | Msa1384750:CDS | 45.0% | |
| CATAACCTCTAGCAAGGGAA+TGG | + | tig0020679:30204-30223 | None:intergenic | 45.0% | |
| TGACGTAAAACCGTAAGCCT+TGG | + | tig0020679:30248-30267 | None:intergenic | 45.0% | |
| ! | GCTTACGGTTTTACGTCAGA+TGG | - | tig0020679:30250-30269 | Msa1384750:CDS | 45.0% |
| ACCCCGATTCTCACATAATG+AGG | + | tig0020679:30439-30458 | None:intergenic | 45.0% | |
| AACTTGGGGTTGGATGATTC+AGG | + | tig0020679:30510-30529 | None:intergenic | 45.0% | |
| GAATCATCCAACCCCAAGTT+TGG | - | tig0020679:30510-30529 | Msa1384750:CDS | 45.0% | |
| TGCTTCGTCATCCAAACTTG+GGG | + | tig0020679:30524-30543 | None:intergenic | 45.0% | |
| CTTGCTTCGTCATCCAAACT+TGG | + | tig0020679:30526-30545 | None:intergenic | 45.0% | |
| TCACGGTCACTAGCTATCAA+CGG | + | tig0020679:30559-30578 | None:intergenic | 45.0% | |
| !! | CTTGTTATTGTTGGCCTTGG+AGG | - | tig0020679:30583-30602 | Msa1384750:CDS | 45.0% |
| TTCCAACATAACCACCTCCA+AGG | + | tig0020679:30600-30619 | None:intergenic | 45.0% | |
| !! | TACAGGACTAGTCCATAGCA+TGG | + | tig0020679:30665-30684 | None:intergenic | 45.0% |
| TGTGAGTGCTTCCTTCTTCT+TGG | + | tig0020679:30731-30750 | None:intergenic | 45.0% | |
| !! | AGAAGGAAGCACTCACATCA+TGG | - | tig0020679:30734-30753 | Msa1384750:CDS | 45.0% |
| !! | GAAGGAAGCACTCACATCAT+GGG | - | tig0020679:30735-30754 | Msa1384750:CDS | 45.0% |
| !! | AAGGAAGCACTCACATCATG+GGG | - | tig0020679:30736-30755 | Msa1384750:CDS | 45.0% |
| TCCCTTGGCATCATCTAGTT+CGG | - | tig0020679:30792-30811 | Msa1384750:CDS | 45.0% | |
| AAGAACTTCTGCCGATGTCA+TGG | - | tig0020679:30843-30862 | Msa1384750:CDS | 45.0% | |
| GATGTCATGGACCTTAGAAG+TGG | - | tig0020679:30856-30875 | Msa1384750:CDS | 45.0% | |
| GCAGCAAGTACCTATAGACT+TGG | - | tig0020679:30940-30959 | Msa1384750:CDS | 45.0% | |
| GTTCTGCTGATCACAATCCT+AGG | - | tig0020679:30962-30981 | Msa1384750:CDS | 45.0% | |
| !! | TTGATCCCGATTTTCGAGCA+GGG | - | tig0020679:30995-31014 | Msa1384750:CDS | 45.0% |
| CAGGGTCGGAGATCAAATAT+AGG | - | tig0020679:31013-31032 | Msa1384750:CDS | 45.0% | |
| TCTCTTCGTTTAGGGAAACC+AGG | + | tig0020679:31057-31076 | None:intergenic | 45.0% | |
| GGTTTCCCTAAACGAAGAGA+TGG | - | tig0020679:31057-31076 | Msa1384750:CDS | 45.0% | |
| CGAAGAGATGGCATGTTTGT+AGG | - | tig0020679:31069-31088 | Msa1384750:CDS | 45.0% | |
| ACCACAGCAAGAGGTTCCTA+AGG | - | tig0020679:29412-29431 | Msa1384750:CDS | 50.0% | |
| ACCTTAGGAACCTCTTGCTG+TGG | + | tig0020679:29416-29435 | None:intergenic | 50.0% | |
| CGTGGCAGTTAGCGACAAAA+AGG | - | tig0020679:29691-29710 | Msa1384750:CDS | 50.0% | |
| GGATTCACCTATTACGGCGA+TGG | - | tig0020679:29772-29791 | Msa1384750:CDS | 50.0% | |
| AGAAACTGGTGCAGGGTCAT+TGG | - | tig0020679:30132-30151 | Msa1384750:CDS | 50.0% | |
| TCGTCATCCAAACTTGGGGT+TGG | + | tig0020679:30520-30539 | None:intergenic | 50.0% | |
| !! | GTTATTGTTGGCCTTGGAGG+TGG | - | tig0020679:30586-30605 | Msa1384750:CDS | 50.0% |
| CCCGAACTAGATGATGCCAA+GGG | + | tig0020679:30796-30815 | None:intergenic | 50.0% | |
| ! | CCCTTGGCATCATCTAGTTC+GGG | - | tig0020679:30793-30812 | Msa1384750:CDS | 50.0% |
| ACCCGAACTAGATGATGCCA+AGG | + | tig0020679:30797-30816 | None:intergenic | 50.0% | |
| ! | CTCTGAGAGCTCCACTTCTA+AGG | + | tig0020679:30870-30889 | None:intergenic | 50.0% |
| CTTAGAAGTGGAGCTCTCAG+AGG | - | tig0020679:30868-30887 | Msa1384750:CDS | 50.0% | |
| GTAGGAGAGCCATACCTTCT+CGG | + | tig0020679:30904-30923 | None:intergenic | 50.0% | |
| ! | GAAGGTATGGCTCTCCTACA+AGG | - | tig0020679:30905-30924 | Msa1384750:CDS | 50.0% |
| TCTCCTACAAGGTTTCCTGC+TGG | - | tig0020679:30916-30935 | Msa1384750:CDS | 50.0% | |
| TCACAATCCTAGGCCAGCTT+CGG | - | tig0020679:30972-30991 | Msa1384750:CDS | 50.0% | |
| AAATCGGGATCAACCGAAGC+TGG | + | tig0020679:30988-31007 | None:intergenic | 50.0% | |
| !! | GTTGATCCCGATTTTCGAGC+AGG | - | tig0020679:30994-31013 | Msa1384750:CDS | 50.0% |
| GCATCAACTATGGATCCTCC+TGG | - | tig0020679:31036-31055 | Msa1384750:CDS | 50.0% | |
| CTTCGTTTAGGGAAACCAGG+AGG | + | tig0020679:31054-31073 | None:intergenic | 50.0% | |
| ACCACAGCAAGAGGTTCCTA+AGG | - | tig0020679:29412-29431 | Msa1384750:CDS | 50.0% | |
| ACCTTAGGAACCTCTTGCTG+TGG | + | tig0020679:29416-29435 | None:intergenic | 50.0% | |
| CGTGGCAGTTAGCGACAAAA+AGG | - | tig0020679:29691-29710 | Msa1384750:CDS | 50.0% | |
| GGATTCACCTATTACGGCGA+TGG | - | tig0020679:29772-29791 | Msa1384750:CDS | 50.0% | |
| AGAAACTGGTGCAGGGTCAT+TGG | - | tig0020679:30132-30151 | Msa1384750:CDS | 50.0% | |
| TCGTCATCCAAACTTGGGGT+TGG | + | tig0020679:30520-30539 | None:intergenic | 50.0% | |
| !! | GTTATTGTTGGCCTTGGAGG+TGG | - | tig0020679:30586-30605 | Msa1384750:CDS | 50.0% |
| CCCGAACTAGATGATGCCAA+GGG | + | tig0020679:30796-30815 | None:intergenic | 50.0% | |
| ! | CCCTTGGCATCATCTAGTTC+GGG | - | tig0020679:30793-30812 | Msa1384750:CDS | 50.0% |
| ACCCGAACTAGATGATGCCA+AGG | + | tig0020679:30797-30816 | None:intergenic | 50.0% | |
| ! | CTCTGAGAGCTCCACTTCTA+AGG | + | tig0020679:30870-30889 | None:intergenic | 50.0% |
| CTTAGAAGTGGAGCTCTCAG+AGG | - | tig0020679:30868-30887 | Msa1384750:CDS | 50.0% | |
| GTAGGAGAGCCATACCTTCT+CGG | + | tig0020679:30904-30923 | None:intergenic | 50.0% | |
| ! | GAAGGTATGGCTCTCCTACA+AGG | - | tig0020679:30905-30924 | Msa1384750:CDS | 50.0% |
| TCTCCTACAAGGTTTCCTGC+TGG | - | tig0020679:30916-30935 | Msa1384750:CDS | 50.0% | |
| TCACAATCCTAGGCCAGCTT+CGG | - | tig0020679:30972-30991 | Msa1384750:CDS | 50.0% | |
| AAATCGGGATCAACCGAAGC+TGG | + | tig0020679:30988-31007 | None:intergenic | 50.0% | |
| !! | GTTGATCCCGATTTTCGAGC+AGG | - | tig0020679:30994-31013 | Msa1384750:CDS | 50.0% |
| GCATCAACTATGGATCCTCC+TGG | - | tig0020679:31036-31055 | Msa1384750:CDS | 50.0% | |
| CTTCGTTTAGGGAAACCAGG+AGG | + | tig0020679:31054-31073 | None:intergenic | 50.0% | |
| AGAGTTTGGGAGGGATCGAG+CGG | - | tig0020679:29869-29888 | Msa1384750:CDS | 55.0% | |
| GAGCGGAGAGGATTGGAGTT+CGG | - | tig0020679:29886-29905 | Msa1384750:CDS | 55.0% | |
| GTTCTGTCACTCCGAGTGCT+AGG | - | tig0020679:30071-30090 | Msa1384750:CDS | 55.0% | |
| ACCGAGCGTTCCAAGGCTTA+CGG | - | tig0020679:30235-30254 | Msa1384750:CDS | 55.0% | |
| ACCGTAAGCCTTGGAACGCT+CGG | + | tig0020679:30239-30258 | None:intergenic | 55.0% | |
| CTTGAGGAGAAAACCGGACG+AGG | + | tig0020679:30463-30482 | None:intergenic | 55.0% | |
| GGCCTTGGAGGTGGTTATGT+TGG | - | tig0020679:30595-30614 | Msa1384750:CDS | 55.0% | |
| ATGGGGACCAGATGATCCCT+TGG | - | tig0020679:30753-30772 | Msa1384750:CDS | 55.0% | |
| GCTGATGCCAAGGGATCATC+TGG | + | tig0020679:30763-30782 | None:intergenic | 55.0% | |
| GATCCCTTGGCATCAGCATC+TGG | - | tig0020679:30766-30785 | Msa1384750:CDS | 55.0% | |
| GCACCAGATGCTGATGCCAA+GGG | + | tig0020679:30772-30791 | None:intergenic | 55.0% | |
| AGCACCAGATGCTGATGCCA+AGG | + | tig0020679:30773-30792 | None:intergenic | 55.0% | |
| ATCAGCATCTGGTGCTCCCT+TGG | - | tig0020679:30777-30796 | Msa1384750:CDS | 55.0% | |
| GCTCCAGCAGGAAACCTTGT+AGG | + | tig0020679:30922-30941 | None:intergenic | 55.0% | |
| ! | TAGGTACTTGCTGCTCCAGC+AGG | + | tig0020679:30934-30953 | None:intergenic | 55.0% |
| !! | TCCCGATTTTCGAGCAGGGT+CGG | - | tig0020679:30999-31018 | Msa1384750:CDS | 55.0% |
| TCCGACCCTGCTCGAAAATC+GGG | + | tig0020679:31003-31022 | None:intergenic | 55.0% | |
| CTCCGACCCTGCTCGAAAAT+CGG | + | tig0020679:31004-31023 | None:intergenic | 55.0% | |
| AGAGTTTGGGAGGGATCGAG+CGG | - | tig0020679:29869-29888 | Msa1384750:CDS | 55.0% | |
| GAGCGGAGAGGATTGGAGTT+CGG | - | tig0020679:29886-29905 | Msa1384750:CDS | 55.0% | |
| GTTCTGTCACTCCGAGTGCT+AGG | - | tig0020679:30071-30090 | Msa1384750:CDS | 55.0% | |
| ACCGAGCGTTCCAAGGCTTA+CGG | - | tig0020679:30235-30254 | Msa1384750:CDS | 55.0% | |
| ACCGTAAGCCTTGGAACGCT+CGG | + | tig0020679:30239-30258 | None:intergenic | 55.0% | |
| CTTGAGGAGAAAACCGGACG+AGG | + | tig0020679:30463-30482 | None:intergenic | 55.0% | |
| GGCCTTGGAGGTGGTTATGT+TGG | - | tig0020679:30595-30614 | Msa1384750:CDS | 55.0% | |
| ATGGGGACCAGATGATCCCT+TGG | - | tig0020679:30753-30772 | Msa1384750:CDS | 55.0% | |
| GCTGATGCCAAGGGATCATC+TGG | + | tig0020679:30763-30782 | None:intergenic | 55.0% | |
| GATCCCTTGGCATCAGCATC+TGG | - | tig0020679:30766-30785 | Msa1384750:CDS | 55.0% | |
| GCACCAGATGCTGATGCCAA+GGG | + | tig0020679:30772-30791 | None:intergenic | 55.0% | |
| AGCACCAGATGCTGATGCCA+AGG | + | tig0020679:30773-30792 | None:intergenic | 55.0% | |
| ATCAGCATCTGGTGCTCCCT+TGG | - | tig0020679:30777-30796 | Msa1384750:CDS | 55.0% | |
| GCTCCAGCAGGAAACCTTGT+AGG | + | tig0020679:30922-30941 | None:intergenic | 55.0% | |
| ! | TAGGTACTTGCTGCTCCAGC+AGG | + | tig0020679:30934-30953 | None:intergenic | 55.0% |
| !! | TCCCGATTTTCGAGCAGGGT+CGG | - | tig0020679:30999-31018 | Msa1384750:CDS | 55.0% |
| TCCGACCCTGCTCGAAAATC+GGG | + | tig0020679:31003-31022 | None:intergenic | 55.0% | |
| CTCCGACCCTGCTCGAAAAT+CGG | + | tig0020679:31004-31023 | None:intergenic | 55.0% | |
| AGGGATCGAGCGGAGAGGAT+TGG | - | tig0020679:29879-29898 | Msa1384750:CDS | 60.0% | |
| GTAAGCCTTGGAACGCTCGG+TGG | + | tig0020679:30236-30255 | None:intergenic | 60.0% | |
| ! | CCATACCTTCTCGGTGGTGG+TGG | + | tig0020679:30895-30914 | None:intergenic | 60.0% |
| CCACCACCACCGAGAAGGTA+TGG | - | tig0020679:30892-30911 | Msa1384750:CDS | 60.0% | |
| GAGCCATACCTTCTCGGTGG+TGG | + | tig0020679:30898-30917 | None:intergenic | 60.0% | |
| GGAGAGCCATACCTTCTCGG+TGG | + | tig0020679:30901-30920 | None:intergenic | 60.0% | |
| ! | GGATCAACCGAAGCTGGCCT+AGG | + | tig0020679:30982-31001 | None:intergenic | 60.0% |
| AGGGATCGAGCGGAGAGGAT+TGG | - | tig0020679:29879-29898 | Msa1384750:CDS | 60.0% | |
| GTAAGCCTTGGAACGCTCGG+TGG | + | tig0020679:30236-30255 | None:intergenic | 60.0% | |
| ! | CCATACCTTCTCGGTGGTGG+TGG | + | tig0020679:30895-30914 | None:intergenic | 60.0% |
| CCACCACCACCGAGAAGGTA+TGG | - | tig0020679:30892-30911 | Msa1384750:CDS | 60.0% | |
| GAGCCATACCTTCTCGGTGG+TGG | + | tig0020679:30898-30917 | None:intergenic | 60.0% | |
| GGAGAGCCATACCTTCTCGG+TGG | + | tig0020679:30901-30920 | None:intergenic | 60.0% | |
| ! | GGATCAACCGAAGCTGGCCT+AGG | + | tig0020679:30982-31001 | None:intergenic | 60.0% |
| TTGGGAGGGATCGAGCGGAG+AGG | - | tig0020679:29874-29893 | Msa1384750:CDS | 65.0% | |
| CGATGCCACCGAGCGTTCCA+AGG | - | tig0020679:30228-30247 | Msa1384750:CDS | 65.0% | |
| ! | GAGAATCGGGGTGCCTCGTC+CGG | - | tig0020679:30447-30466 | Msa1384750:CDS | 65.0% |
| GAGGTCCACCACCACCGAGA+AGG | - | tig0020679:30887-30906 | Msa1384750:CDS | 65.0% | |
| TTGGGAGGGATCGAGCGGAG+AGG | - | tig0020679:29874-29893 | Msa1384750:CDS | 65.0% | |
| CGATGCCACCGAGCGTTCCA+AGG | - | tig0020679:30228-30247 | Msa1384750:CDS | 65.0% | |
| ! | GAGAATCGGGGTGCCTCGTC+CGG | - | tig0020679:30447-30466 | Msa1384750:CDS | 65.0% |
| GAGGTCCACCACCACCGAGA+AGG | - | tig0020679:30887-30906 | Msa1384750:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0020679 | gene | 29170 | 31119 | 29170 | ID=Msa1384750;Name=Msa1384750 |
| tig0020679 | mRNA | 29170 | 31119 | 29170 | ID=Msa1384750-mRNA-1;Parent=Msa1384750;Name=Msa1384750-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|649 |
| tig0020679 | exon | 29170 | 31119 | 29170 | ID=Msa1384750-mRNA-1:exon:9242;Parent=Msa1384750-mRNA-1 |
| tig0020679 | CDS | 29170 | 31119 | 29170 | ID=Msa1384750-mRNA-1:cds;Parent=Msa1384750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
