Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1280750 | XP_013444988.1 | 95.345 | 623 | 21 | 2 | 1 | 615 | 1 | 623 | 0.0 | 1214 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1280750 | A0A072TQ96 | 95.345 | 623 | 21 | 2 | 1 | 615 | 1 | 623 | 0.0 | 1214 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1239400 | Msa1280750 | 0.808979 | 2.373366e-50 | -8.615850e-47 |
| Msa1185460 | Msa1280750 | 0.837219 | 5.913625e-57 | -8.615850e-47 |
| Msa1208370 | Msa1280750 | 0.801487 | 8.797647e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1280750 | MtrunA17_Chr8g0351061 | 95.345 | 623 | 21 | 2 | 1 | 615 | 1 | 623 | 0.0 | 1214 |
| Msa1280750 | MtrunA17_Chr1g0163291 | 59.558 | 633 | 205 | 11 | 1 | 615 | 1 | 600 | 0.0 | 737 |
| Msa1280750 | MtrunA17_Chr3g0115381 | 40.678 | 472 | 270 | 6 | 151 | 614 | 287 | 756 | 3.12e-124 | 384 |
| Msa1280750 | MtrunA17_Chr5g0424991 | 40.100 | 399 | 191 | 4 | 151 | 502 | 505 | 902 | 6.10e-91 | 300 |
| Msa1280750 | MtrunA17_Chr5g0403231 | 35.762 | 151 | 85 | 2 | 405 | 543 | 395 | 545 | 3.92e-21 | 97.8 |
| Msa1280750 | MtrunA17_Chr8g0373901 | 32.778 | 180 | 105 | 4 | 405 | 571 | 398 | 574 | 6.72e-20 | 94.0 |
| Msa1280750 | MtrunA17_Chr5g0425001 | 38.182 | 110 | 66 | 2 | 507 | 615 | 21 | 129 | 3.77e-19 | 84.0 |
| Msa1280750 | MtrunA17_Chr4g0034351 | 32.468 | 154 | 92 | 2 | 405 | 546 | 389 | 542 | 3.52e-18 | 88.6 |
| Msa1280750 | MtrunA17_Chr5g0399331 | 26.939 | 245 | 151 | 8 | 357 | 582 | 301 | 536 | 2.65e-17 | 85.5 |
| Msa1280750 | MtrunA17_Chr5g0402501 | 28.571 | 175 | 113 | 4 | 415 | 580 | 332 | 503 | 4.63e-14 | 75.1 |
| Msa1280750 | MtrunA17_Chr5g0435281 | 28.761 | 226 | 135 | 5 | 379 | 584 | 251 | 470 | 1.72e-13 | 73.2 |
| Msa1280750 | MtrunA17_Chr3g0133631 | 30.928 | 194 | 116 | 7 | 411 | 590 | 347 | 536 | 2.03e-13 | 73.2 |
| Msa1280750 | MtrunA17_Chr1g0153951 | 30.435 | 184 | 116 | 6 | 415 | 590 | 334 | 513 | 2.05e-13 | 73.2 |
| Msa1280750 | MtrunA17_Chr4g0028651 | 28.947 | 152 | 94 | 2 | 405 | 544 | 465 | 614 | 1.41e-11 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1280750 | AT3G11920.1 | 56.028 | 564 | 230 | 7 | 64 | 615 | 73 | 630 | 0.0 | 624 |
| Msa1280750 | AT4G08550.2 | 41.300 | 477 | 261 | 8 | 151 | 615 | 222 | 691 | 7.67e-120 | 371 |
| Msa1280750 | AT4G08550.1 | 36.975 | 476 | 229 | 9 | 151 | 615 | 222 | 637 | 7.97e-94 | 302 |
| Msa1280750 | AT3G13000.1 | 31.416 | 226 | 136 | 6 | 385 | 598 | 303 | 521 | 3.10e-24 | 107 |
| Msa1280750 | AT3G13000.3 | 31.416 | 226 | 136 | 6 | 385 | 598 | 332 | 550 | 3.34e-24 | 107 |
| Msa1280750 | AT3G13000.2 | 31.416 | 226 | 136 | 6 | 385 | 598 | 332 | 550 | 3.34e-24 | 107 |
| Msa1280750 | AT1G16750.1 | 33.636 | 220 | 121 | 6 | 388 | 592 | 285 | 494 | 2.90e-23 | 104 |
| Msa1280750 | AT5G66600.2 | 30.337 | 178 | 110 | 3 | 405 | 571 | 365 | 539 | 6.49e-21 | 97.4 |
| Msa1280750 | AT5G66600.7 | 30.337 | 178 | 110 | 3 | 405 | 571 | 331 | 505 | 6.90e-21 | 97.1 |
| Msa1280750 | AT5G66600.14 | 30.337 | 178 | 110 | 3 | 405 | 571 | 385 | 559 | 7.31e-21 | 97.4 |
| Msa1280750 | AT5G66600.1 | 30.337 | 178 | 110 | 3 | 405 | 571 | 385 | 559 | 7.31e-21 | 97.4 |
| Msa1280750 | AT5G66600.4 | 30.337 | 178 | 110 | 3 | 405 | 571 | 385 | 559 | 7.31e-21 | 97.4 |
| Msa1280750 | AT5G66600.9 | 30.337 | 178 | 110 | 3 | 405 | 571 | 385 | 559 | 7.31e-21 | 97.4 |
| Msa1280750 | AT5G66600.3 | 30.337 | 178 | 110 | 3 | 405 | 571 | 385 | 559 | 7.31e-21 | 97.4 |
| Msa1280750 | AT2G23700.1 | 30.570 | 193 | 119 | 4 | 406 | 586 | 479 | 668 | 2.47e-17 | 86.3 |
| Msa1280750 | AT5G47380.5 | 29.694 | 229 | 132 | 9 | 373 | 582 | 272 | 490 | 5.80e-17 | 84.7 |
| Msa1280750 | AT5G47380.1 | 29.694 | 229 | 132 | 9 | 373 | 582 | 328 | 546 | 6.96e-17 | 84.7 |
| Msa1280750 | AT5G47380.4 | 29.694 | 229 | 132 | 9 | 373 | 582 | 328 | 546 | 7.63e-17 | 84.7 |
| Msa1280750 | AT5G42690.5 | 30.808 | 198 | 116 | 7 | 405 | 590 | 290 | 478 | 9.04e-17 | 84.0 |
| Msa1280750 | AT5G42690.3 | 30.808 | 198 | 116 | 7 | 405 | 590 | 265 | 453 | 9.13e-17 | 84.0 |
| Msa1280750 | AT5G42690.1 | 30.808 | 198 | 116 | 7 | 405 | 590 | 316 | 504 | 9.67e-17 | 84.0 |
| Msa1280750 | AT5G42690.2 | 30.808 | 198 | 116 | 7 | 405 | 590 | 317 | 505 | 9.87e-17 | 84.0 |
| Msa1280750 | AT5G42690.4 | 30.808 | 198 | 116 | 7 | 405 | 590 | 317 | 505 | 9.87e-17 | 84.0 |
| Msa1280750 | AT1G16750.2 | 41.837 | 98 | 53 | 1 | 388 | 485 | 285 | 378 | 1.50e-15 | 79.7 |
| Msa1280750 | AT4G37080.2 | 31.193 | 218 | 126 | 10 | 386 | 588 | 366 | 574 | 3.99e-15 | 79.3 |
| Msa1280750 | AT4G37080.3 | 31.193 | 218 | 126 | 10 | 386 | 588 | 366 | 574 | 3.99e-15 | 79.3 |
| Msa1280750 | AT4G37080.1 | 31.193 | 218 | 126 | 10 | 386 | 588 | 353 | 561 | 4.36e-15 | 79.0 |
| Msa1280750 | AT3G18900.5 | 28.571 | 154 | 98 | 2 | 405 | 546 | 301 | 454 | 1.03e-14 | 77.8 |
| Msa1280750 | AT3G18900.4 | 28.571 | 154 | 98 | 2 | 405 | 546 | 306 | 459 | 1.11e-14 | 77.4 |
| Msa1280750 | AT3G18900.6 | 28.571 | 154 | 98 | 2 | 405 | 546 | 225 | 378 | 1.14e-14 | 77.0 |
| Msa1280750 | AT3G18900.3 | 28.571 | 154 | 98 | 2 | 405 | 546 | 225 | 378 | 1.14e-14 | 77.0 |
| Msa1280750 | AT5G66600.12 | 32.308 | 130 | 77 | 2 | 405 | 523 | 385 | 514 | 6.60e-14 | 75.1 |
| Msa1280750 | AT5G66600.11 | 32.308 | 130 | 77 | 2 | 405 | 523 | 385 | 514 | 6.60e-14 | 75.1 |
| Msa1280750 | AT5G66600.6 | 32.308 | 130 | 77 | 2 | 405 | 523 | 385 | 514 | 6.60e-14 | 75.1 |
| Msa1280750 | AT5G66600.13 | 32.308 | 130 | 77 | 2 | 405 | 523 | 385 | 514 | 6.60e-14 | 75.1 |
| Msa1280750 | AT2G39690.5 | 28.780 | 205 | 132 | 7 | 411 | 605 | 307 | 507 | 2.56e-13 | 73.2 |
| Msa1280750 | AT2G39690.4 | 28.780 | 205 | 132 | 7 | 411 | 605 | 281 | 481 | 2.62e-13 | 73.2 |
| Msa1280750 | AT2G39690.2 | 28.780 | 205 | 132 | 7 | 411 | 605 | 200 | 400 | 2.87e-13 | 72.4 |
| Msa1280750 | AT2G39690.8 | 27.941 | 204 | 134 | 7 | 411 | 605 | 281 | 480 | 1.39e-12 | 70.9 |
| Msa1280750 | AT2G39690.1 | 27.941 | 204 | 134 | 7 | 411 | 605 | 307 | 506 | 1.51e-12 | 70.9 |
| Msa1280750 | AT5G60720.1 | 28.079 | 203 | 116 | 6 | 411 | 591 | 460 | 654 | 2.81e-12 | 70.1 |
| Msa1280750 | AT5G47380.2 | 33.140 | 172 | 89 | 6 | 373 | 526 | 328 | 491 | 3.10e-12 | 69.7 |
| Msa1280750 | AT1G76620.1 | 28.079 | 203 | 117 | 8 | 391 | 573 | 278 | 471 | 4.81e-12 | 69.3 |
| Msa1280750 | AT5G47380.3 | 32.934 | 167 | 86 | 6 | 373 | 521 | 328 | 486 | 9.36e-12 | 68.2 |
| Msa1280750 | AT3G18900.1 | 29.008 | 131 | 81 | 2 | 405 | 523 | 306 | 436 | 7.93e-11 | 65.1 |
Find 133 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATGAAGTGGATTATTTA+TGG | 0.153498 | 8_3:+19517337 | None:intergenic |
| TCCCTTGCTATTATTGAAAA+TGG | 0.165994 | 8_3:-19511832 | Msa1280750:CDS |
| GTGACAGAGTTCAATCTTTC+AGG | 0.192781 | 8_3:-19517011 | Msa1280750:CDS |
| CCTTTCATCTCTTCTTCTTC+AGG | 0.199890 | 8_3:+19516963 | None:intergenic |
| TGCAGGTTCAGTGGTGATTT+TGG | 0.218554 | 8_3:-19511114 | Msa1280750:intron |
| TTTATATGAATTATCTGTTT+TGG | 0.219872 | 8_3:+19510916 | None:intergenic |
| ATTAAAGCATTTGTGGATAA+AGG | 0.223252 | 8_3:+19513342 | None:intergenic |
| CAAATTAAAGCTGCTGTCTT+TGG | 0.259547 | 8_3:+19513292 | None:intergenic |
| TCAATAATAGCAAGGGAATA+AGG | 0.262769 | 8_3:+19511838 | None:intergenic |
| CGGCACTGGCGCATCGTTAC+CGG | 0.273842 | 8_3:+19516674 | None:intergenic |
| AAATTCTTCGCTTCGGCTAA+TGG | 0.290330 | 8_3:+19513192 | None:intergenic |
| TTAATGACCAATCAAAATTC+TGG | 0.292429 | 8_3:+19510986 | None:intergenic |
| AACTGTTTGTGTTGGTTTCT+CGG | 0.301988 | 8_3:+19517370 | None:intergenic |
| ATCACTCAAATTCTTTCCTT+TGG | 0.312487 | 8_3:+19510945 | None:intergenic |
| AATGATTTCCTGTATTTGAT+AGG | 0.313324 | 8_3:-19511868 | Msa1280750:CDS |
| GTCACTAGACCAGCTTTATT+AGG | 0.316643 | 8_3:+19511048 | None:intergenic |
| CGCGAAAATTAAAGCATTTG+TGG | 0.321838 | 8_3:+19513335 | None:intergenic |
| TTCTTCAACGAGAAGCTTAT+AGG | 0.322872 | 8_3:-19516777 | Msa1280750:CDS |
| CTCCTATCAATTACACCTTC+TGG | 0.325024 | 8_3:+19511901 | None:intergenic |
| AAATGAAGTGGATTATTTAT+GGG | 0.326835 | 8_3:+19517338 | None:intergenic |
| GGGTTCCGTGCCGTTAGCTT+CGG | 0.329454 | 8_3:+19517391 | None:intergenic |
| ATGAGATGGTTGGAGTTGTT+AGG | 0.334069 | 8_3:-19516611 | Msa1280750:CDS |
| TTAAAGCATTTGTGGATAAA+GGG | 0.347812 | 8_3:+19513343 | None:intergenic |
| AAGGGCTTCATTAAGGAATA+TGG | 0.350017 | 8_3:+19511784 | None:intergenic |
| ATGATGGATGAAGTGCTTCC+TGG | 0.361470 | 8_3:+19513505 | None:intergenic |
| ACACATCTCTTGAGTGATAA+TGG | 0.362434 | 8_3:-19511027 | Msa1280750:CDS |
| AGTGCTAAAGGGCTTCATTA+AGG | 0.365755 | 8_3:+19511777 | None:intergenic |
| GGAGGAACCATGCCGGATTT+CGG | 0.375994 | 8_3:-19517122 | Msa1280750:CDS |
| ATTTCTTAGGCTGTTGAAAT+CGG | 0.379144 | 8_3:-19513539 | Msa1280750:intron |
| TTCTGGTAAGATATATTAAC+AGG | 0.382018 | 8_3:+19511003 | None:intergenic |
| TGAAAGAACGGGAACGGTTT+CGG | 0.399804 | 8_3:-19516811 | Msa1280750:CDS |
| TGAGATGGTTGGAGTTGTTA+GGG | 0.400490 | 8_3:-19516610 | Msa1280750:CDS |
| CGGATGAACGTGCCGAAATC+CGG | 0.409121 | 8_3:+19517110 | None:intergenic |
| GGTGAAAAGAACCTCACGTT+TGG | 0.421128 | 8_3:+19511327 | None:intergenic |
| ATAAATCATTACTCCTTTGA+CGG | 0.421794 | 8_3:+19517090 | None:intergenic |
| CGCTTATCTCCAGTGCTAAA+GGG | 0.421964 | 8_3:+19511766 | None:intergenic |
| CCGCTTATCTCCAGTGCTAA+AGG | 0.429018 | 8_3:+19511765 | None:intergenic |
| CGAATTTGATCGGAGGTTAA+CGG | 0.430648 | 8_3:-19516718 | Msa1280750:CDS |
| TGATAAGTCTCCGGTGGAAC+TGG | 0.434642 | 8_3:+19517188 | None:intergenic |
| CAAAGTCCAAAGTGAAATAA+CGG | 0.439885 | 8_3:+19511369 | None:intergenic |
| GGTTCCGTGCCGTTAGCTTC+GGG | 0.441529 | 8_3:+19517392 | None:intergenic |
| TGTTGGTTCAGGATCGGATA+AGG | 0.447877 | 8_3:-19516572 | Msa1280750:CDS |
| TAACCGTACACCGGCGGCAC+TGG | 0.462495 | 8_3:+19516660 | None:intergenic |
| GTGGAACTGGTGTTGGGAGA+AGG | 0.468456 | 8_3:+19517201 | None:intergenic |
| GAAACAGCGGCGAATTTGAT+CGG | 0.478247 | 8_3:-19516728 | Msa1280750:CDS |
| CAGCAGCTTTAATTTGTGAC+AGG | 0.479407 | 8_3:-19513285 | Msa1280750:CDS |
| GTGAAAAGAACCTCACGTTT+GGG | 0.479847 | 8_3:+19511328 | None:intergenic |
| GCGCCAGTGCCGCCGGTGTA+CGG | 0.481774 | 8_3:-19516663 | Msa1280750:CDS |
| TTAATGAAGCCCTTTAGCAC+TGG | 0.484515 | 8_3:-19511775 | Msa1280750:CDS |
| AAGAGAAAGAAGTGCTTAAG+TGG | 0.485757 | 8_3:-19511089 | Msa1280750:CDS |
| ACTGTTTGTGTTGGTTTCTC+GGG | 0.486652 | 8_3:+19517371 | None:intergenic |
| GTTAACGGAGATGGTGGTGG+AGG | 0.489480 | 8_3:-19516703 | Msa1280750:CDS |
| TTGAACCCGTTATTTCACTT+TGG | 0.491212 | 8_3:-19511375 | Msa1280750:CDS |
| TGAAAATGATAGAATTGAAG+TGG | 0.491803 | 8_3:-19511259 | Msa1280750:CDS |
| GTCCAGAAGGTGTAATTGAT+AGG | 0.492423 | 8_3:-19511903 | Msa1280750:CDS |
| GATGTCCTCCTATCAAATAC+AGG | 0.492869 | 8_3:+19511860 | None:intergenic |
| ATTATACAAATTCAAGAAGA+AGG | 0.494261 | 8_3:+19511960 | None:intergenic |
| TGATCGGAGGTTAACGGAGA+TGG | 0.494442 | 8_3:-19516712 | Msa1280750:CDS |
| ACCTACGAAATTCTTCGCTT+CGG | 0.495158 | 8_3:+19513185 | None:intergenic |
| TCTCCGGTGGAACTGGTGTT+GGG | 0.498641 | 8_3:+19517195 | None:intergenic |
| TGAAGTTGAACTGTTTGTGT+TGG | 0.499274 | 8_3:+19517362 | None:intergenic |
| AGTTAATATTGTTGAACTAT+CGG | 0.499292 | 8_3:-19511998 | Msa1280750:CDS |
| GTCTCCGGTGGAACTGGTGT+TGG | 0.499509 | 8_3:+19517194 | None:intergenic |
| GAAATCCGGCATGGTTCCTC+CGG | 0.501095 | 8_3:+19517124 | None:intergenic |
| AAATCGGAAAAGAGTTATCC+AGG | 0.503742 | 8_3:-19513523 | Msa1280750:CDS |
| CGTTGTTAGTAACGGTTTCG+TGG | 0.504097 | 8_3:+19517288 | None:intergenic |
| ATGATTATGTTGAAGATGAT+CGG | 0.504698 | 8_3:-19516638 | Msa1280750:CDS |
| AAAGAGCTACGTGAAAGAAC+GGG | 0.504941 | 8_3:-19516822 | Msa1280750:CDS |
| TTGTTGGTTTGATAAGTCTC+CGG | 0.508769 | 8_3:+19517179 | None:intergenic |
| GAGGTTAACGGAGATGGTGG+TGG | 0.510678 | 8_3:-19516706 | Msa1280750:CDS |
| CTTGAATTTGTATAATGCCA+TGG | 0.511853 | 8_3:-19511953 | Msa1280750:CDS |
| TGGAACTGGTGTTGGGAGAA+GGG | 0.511992 | 8_3:+19517202 | None:intergenic |
| ACTAATTTCGTTGTTAGTAA+CGG | 0.517423 | 8_3:+19517280 | None:intergenic |
| AAAGTCCAAAGTGAAATAAC+GGG | 0.519238 | 8_3:+19511370 | None:intergenic |
| GTCATTAAATTCTTGAGTAG+TGG | 0.520931 | 8_3:-19510971 | Msa1280750:exon |
| TACTTGAAACCTAATAAAGC+TGG | 0.523318 | 8_3:-19511057 | Msa1280750:CDS |
| GATTTCCTGTATTTGATAGG+AGG | 0.524616 | 8_3:-19511865 | Msa1280750:CDS |
| ATACAGGAAATCATTGAAGA+AGG | 0.525977 | 8_3:+19511876 | None:intergenic |
| CCGACTAGCTTCTCCGTCGC+CGG | 0.527302 | 8_3:-19517143 | Msa1280750:CDS |
| CTTCAAGTGCGCGCGTAATG+AGG | 0.530496 | 8_3:-19516487 | Msa1280750:intron |
| AGAGTTGTAGATGAATTAAG+AGG | 0.530709 | 8_3:-19511300 | Msa1280750:CDS |
| AATTCATCTACAACTCTATG+AGG | 0.536046 | 8_3:+19511306 | None:intergenic |
| TCGGGTAAAACGAAATGAAG+TGG | 0.537153 | 8_3:+19517326 | None:intergenic |
| GGAGATTGTTGGTTCAGGAT+CGG | 0.544428 | 8_3:-19516578 | Msa1280750:CDS |
| GTTTCGACAATCGATTGAAG+AGG | 0.545742 | 8_3:-19517039 | Msa1280750:CDS |
| CGGCATGGTTCCTCCGGCGA+CGG | 0.548482 | 8_3:+19517130 | None:intergenic |
| TCTCCCAACACCAGTTCCAC+CGG | 0.548558 | 8_3:-19517198 | Msa1280750:CDS |
| GATCGGACGGATGAGATGGT+TGG | 0.555673 | 8_3:-19516621 | Msa1280750:CDS |
| TTCATGCAGTCATTAGCGTC+GGG | 0.564975 | 8_3:-19511927 | Msa1280750:CDS |
| TCGGCACGTTCATCCGTCAA+AGG | 0.565167 | 8_3:-19517103 | Msa1280750:CDS |
| GAAAGAGCTACGTGAAAGAA+CGG | 0.573200 | 8_3:-19516823 | Msa1280750:CDS |
| TTTCACTTTGGACTTTGTAA+CGG | 0.573444 | 8_3:-19511363 | Msa1280750:CDS |
| ATTCATGCAGTCATTAGCGT+CGG | 0.573907 | 8_3:-19511928 | Msa1280750:CDS |
| ACTTGAACATCCGCACGAGA+TGG | 0.574497 | 8_3:+19511217 | None:intergenic |
| GGTGTTGGGAGAAGGGAATG+AGG | 0.578390 | 8_3:+19517209 | None:intergenic |
| TTCTCGTTGAAGAAAATCAT+CGG | 0.578954 | 8_3:+19516786 | None:intergenic |
| AGAAGCATAAGACTCAAGAA+TGG | 0.582137 | 8_3:+19513243 | None:intergenic |
| TTCAACGAGAAGCTTATAGG+AGG | 0.582390 | 8_3:-19516774 | Msa1280750:CDS |
| GATGGACAGTTCTCTTCTCT+AGG | 0.585794 | 8_3:+19511235 | None:intergenic |
| ACTAGCTTCTCCGTCGCCGG+AGG | 0.587400 | 8_3:-19517140 | Msa1280750:CDS |
| TTAGGTAGGAGTAGATTCTG+TGG | 0.587781 | 8_3:-19510808 | None:intergenic |
| CCTGAAGAAGAAGAGATGAA+AGG | 0.598295 | 8_3:-19516963 | Msa1280750:CDS |
| CGTCGCCGGAGGAACCATGC+CGG | 0.599821 | 8_3:-19517129 | Msa1280750:CDS |
| TTGGTTTGATAAGTCTCCGG+TGG | 0.600131 | 8_3:+19517182 | None:intergenic |
| ATCTCGTGCGGATGTTCAAG+TGG | 0.600150 | 8_3:-19511215 | Msa1280750:intron |
| ATTAGCGTCGGGAGTCCAGA+AGG | 0.601450 | 8_3:-19511916 | Msa1280750:CDS |
| GAAGAATCACGTTCTTCTCG+AGG | 0.623420 | 8_3:-19516941 | Msa1280750:CDS |
| CACTGGAGATAAGCGGTCAG+AGG | 0.623788 | 8_3:-19511758 | Msa1280750:intron |
| CCGGCGACGGAGAAGCTAGT+CGG | 0.623807 | 8_3:+19517143 | None:intergenic |
| TTACCCGAAAATCACGCTAA+CGG | 0.625572 | 8_3:-19517311 | Msa1280750:CDS |
| TCTTGAGTAGTGGCAGCCAA+AGG | 0.638308 | 8_3:-19510961 | Msa1280750:exon |
| TAATCATAACCGTACACCGG+CGG | 0.643157 | 8_3:+19516654 | None:intergenic |
| GAACGTGCCGAAATCCGGCA+TGG | 0.647367 | 8_3:+19517115 | None:intergenic |
| TCGGAGGTTAACGGAGATGG+TGG | 0.648357 | 8_3:-19516709 | Msa1280750:CDS |
| AGATGATCGGACGGATGAGA+TGG | 0.650204 | 8_3:-19516625 | Msa1280750:CDS |
| TGGTTCAGGATCGGATAAGG+AGG | 0.654976 | 8_3:-19516569 | Msa1280750:CDS |
| AGAGAACTGTCCATCTCGTG+CGG | 0.658170 | 8_3:-19511227 | Msa1280750:CDS |
| GCCGAAGCGAAGAATTTCGT+AGG | 0.664023 | 8_3:-19513186 | Msa1280750:intron |
| TCTTTCAGGTCTCAGCGTCG+TGG | 0.666569 | 8_3:-19516997 | Msa1280750:CDS |
| GTATTCTCAGATGTAATCAG+AGG | 0.669506 | 8_3:-19511810 | Msa1280750:CDS |
| TTATGTTGAAGATGATCGGA+CGG | 0.673531 | 8_3:-19516634 | Msa1280750:CDS |
| GCTACGTGAAAGAACGGGAA+CGG | 0.678402 | 8_3:-19516817 | Msa1280750:CDS |
| CAAAATCTAGCCCAAACGTG+AGG | 0.679970 | 8_3:-19511338 | Msa1280750:CDS |
| CCTTTAGCACTGGAGATAAG+CGG | 0.683777 | 8_3:-19511765 | Msa1280750:CDS |
| AACGAAATTAGTTATGAACA+AGG | 0.684970 | 8_3:-19517269 | Msa1280750:CDS |
| GGGTCCCGAAGCTAACGGCA+CGG | 0.693360 | 8_3:-19517396 | Msa1280750:CDS |
| ACAGCGGCGAATTTGATCGG+AGG | 0.696604 | 8_3:-19516725 | Msa1280750:CDS |
| TTGAATTCGTTACGAAACAG+CGG | 0.707942 | 8_3:-19516741 | Msa1280750:CDS |
| ACATAATCATAACCGTACAC+CGG | 0.710456 | 8_3:+19516651 | None:intergenic |
| AATGACTGCATGAATGACCA+TGG | 0.716324 | 8_3:+19511936 | None:intergenic |
| GTAATGGGTCCCGAAGCTAA+CGG | 0.723744 | 8_3:-19517401 | Msa1280750:CDS |
| GAAATTAGTTATGAACAAGG+AGG | 0.751176 | 8_3:-19517266 | Msa1280750:CDS |
| ATGGTGGTGGAGGAATACGC+CGG | 0.754280 | 8_3:-19516693 | Msa1280750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAACTAATAATTATTGTTTT+AGG | + | chr8_3:19513899-19513918 | None:intergenic | 10.0% |
| !!! | TTATGTTTTCAAATTTAAAA+CGG | - | chr8_3:19514183-19514202 | Msa1280750:intron | 10.0% |
| !!! | TTTTTAATTTCTTAACAAAA+TGG | - | chr8_3:19515798-19515817 | Msa1280750:intron | 10.0% |
| !! | TTATATATAATATCATGAAT+TGG | - | chr8_3:19516503-19516522 | Msa1280750:CDS | 10.0% |
| !! | AAAAATATATTTCATAAGAA+AGG | + | chr8_3:19517074-19517093 | None:intergenic | 10.0% |
| !!! | AAAAAAAAAAAGGTATTTTT+AGG | - | chr8_3:19517381-19517400 | Msa1280750:CDS | 10.0% |
| !!! | ATTAAAACATTTTTTTTAGC+TGG | - | chr8_3:19512649-19512668 | Msa1280750:intron | 15.0% |
| !! | AAACATATTAGATAAATCTA+AGG | - | chr8_3:19513377-19513396 | Msa1280750:CDS | 15.0% |
| !! | TAGATAAACAGATTATAAAA+AGG | - | chr8_3:19513457-19513476 | Msa1280750:intron | 15.0% |
| !!! | CAATTTTATATGAAAAGATA+TGG | - | chr8_3:19513765-19513784 | Msa1280750:intron | 15.0% |
| !!! | AGAATAAAAAACAATTTTGA+GGG | - | chr8_3:19514391-19514410 | Msa1280750:intron | 15.0% |
| !! | AATGCAAATAATTATTATAG+TGG | + | chr8_3:19514641-19514660 | None:intergenic | 15.0% |
| !!! | TACATTTAATTCTTTTATTG+TGG | - | chr8_3:19515067-19515086 | Msa1280750:intron | 15.0% |
| !!! | TTATATGAATTATCTGTTTT+GGG | + | chr8_3:19517293-19517312 | None:intergenic | 15.0% |
| !!! | TTTATATGAATTATCTGTTT+TGG | + | chr8_3:19517294-19517313 | None:intergenic | 15.0% |
| !!! | AAATGAAGTGGATTATTTAT+GGG | + | chr8_3:19510872-19510891 | None:intergenic | 20.0% |
| !!! | ATTGTTAAGAATTGTTTTGA+AGG | - | chr8_3:19511667-19511686 | Msa1280750:intron | 20.0% |
| !! | TACAGAAATACGTAAATATA+CGG | + | chr8_3:19511760-19511779 | None:intergenic | 20.0% |
| !!! | TTTTAATCGTATTTGTTTGT+TGG | - | chr8_3:19511781-19511800 | Msa1280750:CDS | 20.0% |
| !! | TCAAAAGAAATACTAGTATA+CGG | + | chr8_3:19511821-19511840 | None:intergenic | 20.0% |
| !!! | TAAATATTGGTTTAGCTAAA+TGG | + | chr8_3:19511936-19511955 | None:intergenic | 20.0% |
| !! | ATTTAGCTAAACCAATATTT+AGG | - | chr8_3:19511935-19511954 | Msa1280750:CDS | 20.0% |
| !! | ATCACAATTGTTTATGAAAA+AGG | - | chr8_3:19512548-19512567 | Msa1280750:intron | 20.0% |
| !! | AATTGTTTATGAAAAAGGAA+GGG | - | chr8_3:19512553-19512572 | Msa1280750:intron | 20.0% |
| !! | AATTCACAAATCATATTTGT+GGG | + | chr8_3:19513332-19513351 | None:intergenic | 20.0% |
| !! | TAATTCACAAATCATATTTG+TGG | + | chr8_3:19513333-19513352 | None:intergenic | 20.0% |
| !! | AAGGAAATTATTACCATAAA+AGG | + | chr8_3:19513547-19513566 | None:intergenic | 20.0% |
| !! | TTAACATATGCGTATTATAT+TGG | - | chr8_3:19513573-19513592 | Msa1280750:intron | 20.0% |
| !! | CTTTCTTAAACAATGTATTT+AGG | + | chr8_3:19513656-19513675 | None:intergenic | 20.0% |
| !!! | AATTACTTCTAAGAAAAGAA+AGG | + | chr8_3:19513964-19513983 | None:intergenic | 20.0% |
| !! | GAAAGATAATTGAAAATATG+TGG | - | chr8_3:19514346-19514365 | Msa1280750:intron | 20.0% |
| !!! | GAGAATAAAAAACAATTTTG+AGG | - | chr8_3:19514390-19514409 | Msa1280750:intron | 20.0% |
| !! | ATATTCACATTTGATTCAAA+GGG | + | chr8_3:19514562-19514581 | None:intergenic | 20.0% |
| !! | TTATATAGCAAATTCTATCA+AGG | + | chr8_3:19515241-19515260 | None:intergenic | 20.0% |
| !! | CTACTGAAAACAATTATTAT+AGG | + | chr8_3:19515379-19515398 | None:intergenic | 20.0% |
| !! | TAACATCATTGTAATTTAAG+TGG | + | chr8_3:19515941-19515960 | None:intergenic | 20.0% |
| !! | AGTTAATATTGTTGAACTAT+CGG | - | chr8_3:19516209-19516228 | Msa1280750:intron | 20.0% |
| !! | ATTATACAAATTCAAGAAGA+AGG | + | chr8_3:19516250-19516269 | None:intergenic | 20.0% |
| !! | AACATGTAAATGATTGATTA+TGG | - | chr8_3:19516762-19516781 | Msa1280750:CDS | 20.0% |
| !!! | CTTATGAAATATATTTTTGC+AGG | - | chr8_3:19517076-19517095 | Msa1280750:CDS | 20.0% |
| !!! | AAAAAAAGGTATTTTTAGGT+AGG | - | chr8_3:19517385-19517404 | Msa1280750:CDS | 20.0% |
| !!! | GAAATGAAGTGGATTATTTA+TGG | + | chr8_3:19510873-19510892 | None:intergenic | 25.0% |
| ! | ACTAATTTCGTTGTTAGTAA+CGG | + | chr8_3:19510930-19510949 | None:intergenic | 25.0% |
| ! | AACGAAATTAGTTATGAACA+AGG | - | chr8_3:19510938-19510957 | Msa1280750:three_prime_UTR | 25.0% |
| ! | ATAAATCATTACTCCTTTGA+CGG | + | chr8_3:19511120-19511139 | None:intergenic | 25.0% |
| ! | ATGATTATGTTGAAGATGAT+CGG | - | chr8_3:19511569-19511588 | Msa1280750:intron | 25.0% |
| ! | ATACTGTCTTTGTCTAAATT+CGG | + | chr8_3:19511899-19511918 | None:intergenic | 25.0% |
| !!! | GGAGAAACAGTTTTTTTTTT+TGG | - | chr8_3:19511965-19511984 | Msa1280750:CDS | 25.0% |
| ! | ATAAGCACTTATTGTGATAA+GGG | + | chr8_3:19512007-19512026 | None:intergenic | 25.0% |
| ! | TATAAGCACTTATTGTGATA+AGG | + | chr8_3:19512008-19512027 | None:intergenic | 25.0% |
| ! | AATCGTACAATGTTGAATTA+TGG | - | chr8_3:19512104-19512123 | Msa1280750:intron | 25.0% |
| !! | TGAAATATGTTTTACACTGA+CGG | - | chr8_3:19512138-19512157 | Msa1280750:intron | 25.0% |
| !!! | AGATTGAAAATGTTTTTGCA+TGG | - | chr8_3:19512328-19512347 | Msa1280750:intron | 25.0% |
| ! | CAATTGTTTATGAAAAAGGA+AGG | - | chr8_3:19512552-19512571 | Msa1280750:intron | 25.0% |
| ! | ATTGTTTATGAAAAAGGAAG+GGG | - | chr8_3:19512554-19512573 | Msa1280750:intron | 25.0% |
| !! | TTTTGTCACAAATTCGAAAT+TGG | - | chr8_3:19512848-19512867 | Msa1280750:intron | 25.0% |
| ! | GAGTAACAAAACAATATTGA+AGG | - | chr8_3:19513238-19513257 | Msa1280750:CDS | 25.0% |
| ! | TAACAAAACAATATTGAAGG+TGG | - | chr8_3:19513241-19513260 | Msa1280750:CDS | 25.0% |
| ! | CATATTTGTGGGATTAAATA+TGG | + | chr8_3:19513321-19513340 | None:intergenic | 25.0% |
| ! | AATTAAATTGATGTAGCAGA+TGG | - | chr8_3:19513412-19513431 | Msa1280750:intron | 25.0% |
| ! | CAGATGGATAACTAAATAAA+GGG | - | chr8_3:19513428-19513447 | Msa1280750:intron | 25.0% |
| !! | TCAAAAACAGTTTCCTTTTA+TGG | - | chr8_3:19513531-19513550 | Msa1280750:CDS | 25.0% |
| ! | ACGCATATGTTAAACATAAA+AGG | + | chr8_3:19513566-19513585 | None:intergenic | 25.0% |
| ! | AAAATTCTAAGTCAAGTAGA+AGG | - | chr8_3:19513698-19513717 | Msa1280750:intron | 25.0% |
| !! | TGATATTAGCATTTTGTCAA+GGG | + | chr8_3:19513831-19513850 | None:intergenic | 25.0% |
| !!! | ATATGTCACAATCCTTTTTT+AGG | - | chr8_3:19513922-19513941 | Msa1280750:intron | 25.0% |
| ! | TGACAAATAACTCCTAAAAA+AGG | + | chr8_3:19513937-19513956 | None:intergenic | 25.0% |
| ! | TGCATCTATATTCAAATCTA+CGG | - | chr8_3:19514156-19514175 | Msa1280750:intron | 25.0% |
| !! | ATTTTGGATCAAATCTATTG+TGG | - | chr8_3:19514416-19514435 | Msa1280750:intron | 25.0% |
| ! | GAAAGAATACTGAAAATTTG+CGG | - | chr8_3:19514446-19514465 | Msa1280750:intron | 25.0% |
| ! | AATCATCTATTTCAACATGA+AGG | - | chr8_3:19514470-19514489 | Msa1280750:intron | 25.0% |
| ! | CATATTCACATTTGATTCAA+AGG | + | chr8_3:19514563-19514582 | None:intergenic | 25.0% |
| ! | TGATTTATTGATCCAAAGAT+AGG | - | chr8_3:19514593-19514612 | Msa1280750:intron | 25.0% |
| ! | TGCATTTGTAACAATTTCTT+AGG | - | chr8_3:19514655-19514674 | Msa1280750:intron | 25.0% |
| !!! | ATTTTTGGTAGTTTCCTTAT+TGG | - | chr8_3:19514773-19514792 | Msa1280750:intron | 25.0% |
| !! | TTAAAGCATTTGTGGATAAA+GGG | + | chr8_3:19514867-19514886 | None:intergenic | 25.0% |
| !! | ATTAAAGCATTTGTGGATAA+AGG | + | chr8_3:19514868-19514887 | None:intergenic | 25.0% |
| ! | TGTGGATCATAAATAGTATT+GGG | - | chr8_3:19515120-19515139 | Msa1280750:intron | 25.0% |
| ! | ATAAGAGCTTATCATATAAG+TGG | - | chr8_3:19515301-19515320 | Msa1280750:intron | 25.0% |
| !! | ATTGTTTTCAGTAGTTATCT+AGG | - | chr8_3:19515385-19515404 | Msa1280750:intron | 25.0% |
| ! | GATTATTCGAACTTATCTAT+TGG | + | chr8_3:19515491-19515510 | None:intergenic | 25.0% |
| ! | TTCTATTCTATGTCAATCAA+AGG | + | chr8_3:19515656-19515675 | None:intergenic | 25.0% |
| ! | TTTCTTAACAAAATGGTACT+TGG | - | chr8_3:19515805-19515824 | Msa1280750:intron | 25.0% |
| ! | AACCTTTGTGTTATACATTA+CGG | - | chr8_3:19515981-19516000 | Msa1280750:intron | 25.0% |
| !!! | AGCTTTAAAGTAACTCAATA+TGG | + | chr8_3:19516008-19516027 | None:intergenic | 25.0% |
| ! | AAAAGCTAAGAAACTAGATT+TGG | + | chr8_3:19516088-19516107 | None:intergenic | 25.0% |
| ! | AATGATTTCCTGTATTTGAT+AGG | - | chr8_3:19516339-19516358 | Msa1280750:intron | 25.0% |
| !! | ACCATTTTCAATAATAGCAA+GGG | + | chr8_3:19516379-19516398 | None:intergenic | 25.0% |
| !! | TACCATTTTCAATAATAGCA+AGG | + | chr8_3:19516380-19516399 | None:intergenic | 25.0% |
| ! | TGAAAATGATAGAATTGAAG+TGG | - | chr8_3:19516948-19516967 | Msa1280750:CDS | 25.0% |
| ! | TTCTGGTAAGATATATTAAC+AGG | + | chr8_3:19517207-19517226 | None:intergenic | 25.0% |
| !!! | TATCTTACCAGAATTTTGAT+TGG | - | chr8_3:19517214-19517233 | Msa1280750:CDS | 25.0% |
| ! | TTAATGACCAATCAAAATTC+TGG | + | chr8_3:19517224-19517243 | None:intergenic | 25.0% |
| GAAATTAGTTATGAACAAGG+AGG | - | chr8_3:19510941-19510960 | Msa1280750:three_prime_UTR | 30.0% | |
| ! | TTTGAAGAATTTTCTCACTG+CGG | + | chr8_3:19511311-19511330 | None:intergenic | 30.0% |
| TTCTCGTTGAAGAAAATCAT+CGG | + | chr8_3:19511424-19511443 | None:intergenic | 30.0% | |
| !! | TTTAGCTAAATGGAGTATTG+AGG | + | chr8_3:19511926-19511945 | None:intergenic | 30.0% |
| AACCAATATTTAGGCAAGTT+TGG | - | chr8_3:19511944-19511963 | Msa1280750:CDS | 30.0% | |
| ! | CGATGACTAGTTCTTAAAAA+TGG | + | chr8_3:19512197-19512216 | None:intergenic | 30.0% |
| ACGAGACGTAGAAATATTAA+TGG | - | chr8_3:19512228-19512247 | Msa1280750:intron | 30.0% | |
| ATTTGTGTTTCGAAATGATG+AGG | - | chr8_3:19512435-19512454 | Msa1280750:intron | 30.0% | |
| TTTGTGTTTCGAAATGATGA+GGG | - | chr8_3:19512436-19512455 | Msa1280750:intron | 30.0% | |
| ! | TAAACAATTGTGATTTGTCG+TGG | + | chr8_3:19512542-19512561 | None:intergenic | 30.0% |
| TCATTGTATACAATCCTTTG+GGG | + | chr8_3:19512698-19512717 | None:intergenic | 30.0% | |
| CTCATTGTATACAATCCTTT+GGG | + | chr8_3:19512699-19512718 | None:intergenic | 30.0% | |
| TCTCATTGTATACAATCCTT+TGG | + | chr8_3:19512700-19512719 | None:intergenic | 30.0% | |
| GATTGTATACAATGAGAAGT+GGG | - | chr8_3:19512703-19512722 | Msa1280750:intron | 30.0% | |
| ATTGTATACAATGAGAAGTG+GGG | - | chr8_3:19512704-19512723 | Msa1280750:intron | 30.0% | |
| ! | AAGATAATTTGTGCAAGGAT+CGG | + | chr8_3:19512747-19512766 | None:intergenic | 30.0% |
| ! | TTGGTAAGATAATTTGTGCA+AGG | + | chr8_3:19512752-19512771 | None:intergenic | 30.0% |
| TTACCAACTAGATACATTCA+GGG | - | chr8_3:19512765-19512784 | Msa1280750:intron | 30.0% | |
| TTAAATTGATACCATATGCG+TGG | - | chr8_3:19512890-19512909 | Msa1280750:intron | 30.0% | |
| GCAGATGGATAACTAAATAA+AGG | - | chr8_3:19513427-19513446 | Msa1280750:intron | 30.0% | |
| TGTCAAGGGAAAATGATATT+AGG | + | chr8_3:19513817-19513836 | None:intergenic | 30.0% | |
| ! | GTGATATTAGCATTTTGTCA+AGG | + | chr8_3:19513832-19513851 | None:intergenic | 30.0% |
| TACTTTCCTGTATGAAATAG+GGG | + | chr8_3:19514132-19514151 | None:intergenic | 30.0% | |
| CTACTTTCCTGTATGAAATA+GGG | + | chr8_3:19514133-19514152 | None:intergenic | 30.0% | |
| ACTACTTTCCTGTATGAAAT+AGG | + | chr8_3:19514134-19514153 | None:intergenic | 30.0% | |
| AAGTAAATACCGCATTATGA+CGG | - | chr8_3:19514242-19514261 | Msa1280750:intron | 30.0% | |
| AAAAACACATTGGACAAAGA+CGG | - | chr8_3:19514271-19514290 | Msa1280750:intron | 30.0% | |
| !! | AACAATTTTGAGGGAGATTT+TGG | - | chr8_3:19514400-19514419 | Msa1280750:intron | 30.0% |
| ATTTCTTAGGCTGTTGAAAT+CGG | - | chr8_3:19514668-19514687 | Msa1280750:intron | 30.0% | |
| ! | ACTTCATCCATCATGTTTTT+GGG | - | chr8_3:19514711-19514730 | Msa1280750:intron | 30.0% |
| TTTCTTACCCAAAAACATGA+TGG | + | chr8_3:19514721-19514740 | None:intergenic | 30.0% | |
| !!! | TGAAAGTGTCACAACATTTT+TGG | - | chr8_3:19514758-19514777 | Msa1280750:intron | 30.0% |
| !! | AGGGAAAATGATTTTGAAGA+TGG | - | chr8_3:19514810-19514829 | Msa1280750:intron | 30.0% |
| !! | CACAAATGCTTTAATTTTCG+CGG | - | chr8_3:19514873-19514892 | Msa1280750:intron | 30.0% |
| ATACTATTTATGATCCACAC+TGG | + | chr8_3:19515119-19515138 | None:intergenic | 30.0% | |
| GTGTGGATCATAAATAGTAT+TGG | - | chr8_3:19515119-19515138 | Msa1280750:intron | 30.0% | |
| !! | AGAATTTGCTATATAAAGCC+TGG | - | chr8_3:19515245-19515264 | Msa1280750:intron | 30.0% |
| TGTCATATGTTCTTATGAAC+AGG | - | chr8_3:19515449-19515468 | Msa1280750:intron | 30.0% | |
| TCGAATAATCCAATCCAAAT+AGG | - | chr8_3:19515501-19515520 | Msa1280750:intron | 30.0% | |
| TCTTAGCATCATATTTGTGT+AGG | - | chr8_3:19515537-19515556 | Msa1280750:intron | 30.0% | |
| AGTTGTGATCTTTGATATTG+CGG | - | chr8_3:19515892-19515911 | Msa1280750:intron | 30.0% | |
| ! | GACATTTTCTTTCTAATTGC+AGG | - | chr8_3:19516157-19516176 | Msa1280750:intron | 30.0% |
| CTTGAATTTGTATAATGCCA+TGG | - | chr8_3:19516254-19516273 | Msa1280750:intron | 30.0% | |
| ATACAGGAAATCATTGAAGA+AGG | + | chr8_3:19516334-19516353 | None:intergenic | 30.0% | |
| TCAATAATAGCAAGGGAATA+AGG | + | chr8_3:19516372-19516391 | None:intergenic | 30.0% | |
| !! | TCCCTTGCTATTATTGAAAA+TGG | - | chr8_3:19516375-19516394 | Msa1280750:intron | 30.0% |
| CAACTTCAAGCTATATGATT+TGG | + | chr8_3:19516626-19516645 | None:intergenic | 30.0% | |
| AAAGTCCAAAGTGAAATAAC+GGG | + | chr8_3:19516840-19516859 | None:intergenic | 30.0% | |
| CAAAGTCCAAAGTGAAATAA+CGG | + | chr8_3:19516841-19516860 | None:intergenic | 30.0% | |
| TTTCACTTTGGACTTTGTAA+CGG | - | chr8_3:19516844-19516863 | Msa1280750:CDS | 30.0% | |
| AATTCATCTACAACTCTATG+AGG | + | chr8_3:19516904-19516923 | None:intergenic | 30.0% | |
| AGAGTTGTAGATGAATTAAG+AGG | - | chr8_3:19516907-19516926 | Msa1280750:CDS | 30.0% | |
| !!! | TTCTAGCTTTTCTTAAGCTT+TGG | - | chr8_3:19517022-19517041 | Msa1280750:CDS | 30.0% |
| !! | ATATATTTTTGCAGGTTCAG+TGG | - | chr8_3:19517084-19517103 | Msa1280750:CDS | 30.0% |
| TACTTGAAACCTAATAAAGC+TGG | - | chr8_3:19517150-19517169 | Msa1280750:CDS | 30.0% | |
| GTCATTAAATTCTTGAGTAG+TGG | - | chr8_3:19517236-19517255 | Msa1280750:CDS | 30.0% | |
| ATCACTCAAATTCTTTCCTT+TGG | + | chr8_3:19517265-19517284 | None:intergenic | 30.0% | |
| !! | AACTGTTTGTGTTGGTTTCT+CGG | + | chr8_3:19510840-19510859 | None:intergenic | 35.0% |
| TGAAGTTGAACTGTTTGTGT+TGG | + | chr8_3:19510848-19510867 | None:intergenic | 35.0% | |
| GTGTAGATAGCAAAAACGAA+GGG | - | chr8_3:19510963-19510982 | Msa1280750:exon | 35.0% | |
| !! | TTGTTGGTTTGATAAGTCTC+CGG | + | chr8_3:19511031-19511050 | None:intergenic | 35.0% |
| TTCTTCAACGAGAAGCTTAT+AGG | - | chr8_3:19511430-19511449 | Msa1280750:intron | 35.0% | |
| TTGAATTCGTTACGAAACAG+CGG | - | chr8_3:19511466-19511485 | Msa1280750:intron | 35.0% | |
| ACATAATCATAACCGTACAC+CGG | + | chr8_3:19511559-19511578 | None:intergenic | 35.0% | |
| TTATGTTGAAGATGATCGGA+CGG | - | chr8_3:19511573-19511592 | Msa1280750:intron | 35.0% | |
| ! | TTGGAGTTGTTAGGGTTTTA+AGG | - | chr8_3:19511605-19511624 | Msa1280750:intron | 35.0% |
| !! | TGGAGTTGTTAGGGTTTTAA+GGG | - | chr8_3:19511606-19511625 | Msa1280750:intron | 35.0% |
| CTCCAAACTTGCCTAAATAT+TGG | + | chr8_3:19511949-19511968 | None:intergenic | 35.0% | |
| GTTGAATTATGGTTGCTTGA+TGG | - | chr8_3:19512115-19512134 | Msa1280750:intron | 35.0% | |
| ! | TTTTTGCATGGAGAAGCTTT+TGG | - | chr8_3:19512340-19512359 | Msa1280750:intron | 35.0% |
| AATGTAGCTCGTGTATTGAA+AGG | - | chr8_3:19512407-19512426 | Msa1280750:intron | 35.0% | |
| TTGTGTTTCGAAATGATGAG+GGG | - | chr8_3:19512437-19512456 | Msa1280750:intron | 35.0% | |
| TACAAGTACTCGAACTTGAA+TGG | - | chr8_3:19512483-19512502 | Msa1280750:intron | 35.0% | |
| ACAAGTACTCGAACTTGAAT+GGG | - | chr8_3:19512484-19512503 | Msa1280750:intron | 35.0% | |
| TTTATGAAAAAGGAAGGGGT+TGG | - | chr8_3:19512558-19512577 | Msa1280750:intron | 35.0% | |
| TTATGAAAAAGGAAGGGGTT+GGG | - | chr8_3:19512559-19512578 | Msa1280750:intron | 35.0% | |
| TATCTAACTTCTATCCCCAA+AGG | - | chr8_3:19512681-19512700 | Msa1280750:intron | 35.0% | |
| GGATTGTATACAATGAGAAG+TGG | - | chr8_3:19512702-19512721 | Msa1280750:intron | 35.0% | |
| ! | AGATAATTTGTGCAAGGATC+GGG | + | chr8_3:19512746-19512765 | None:intergenic | 35.0% |
| CTTACCAACTAGATACATTC+AGG | - | chr8_3:19512764-19512783 | Msa1280750:intron | 35.0% | |
| TACCAACTAGATACATTCAG+GGG | - | chr8_3:19512766-19512785 | Msa1280750:intron | 35.0% | |
| ! | ATGAGATTTTTCCACGCATA+TGG | + | chr8_3:19512904-19512923 | None:intergenic | 35.0% |
| ACGTATCACCAATTAGTTGT+GGG | + | chr8_3:19513066-19513085 | None:intergenic | 35.0% | |
| ! | AACTAATTGGTGATACGTGA+GGG | - | chr8_3:19513068-19513087 | Msa1280750:intron | 35.0% |
| ! | TTCTTTTACAGCCACAACTT+TGG | - | chr8_3:19513148-19513167 | Msa1280750:intron | 35.0% |
| ! | ACAACTTTGGTGATACTTGA+GGG | - | chr8_3:19513161-19513180 | Msa1280750:intron | 35.0% |
| ATTCTACCCCTATTTCATAC+AGG | - | chr8_3:19514123-19514142 | Msa1280750:intron | 35.0% | |
| AGTAAATACCGCATTATGAC+GGG | - | chr8_3:19514243-19514262 | Msa1280750:intron | 35.0% | |
| ! | TTTGATTTCCCGTCATAATG+CGG | + | chr8_3:19514254-19514273 | None:intergenic | 35.0% |
| ACGGGAAATCAAAAACACAT+TGG | - | chr8_3:19514261-19514280 | Msa1280750:intron | 35.0% | |
| AAATCGGAAAAGAGTTATCC+AGG | - | chr8_3:19514684-19514703 | Msa1280750:intron | 35.0% | |
| ! | CACTTCATCCATCATGTTTT+TGG | - | chr8_3:19514710-19514729 | Msa1280750:intron | 35.0% |
| ! | CGCGAAAATTAAAGCATTTG+TGG | + | chr8_3:19514875-19514894 | None:intergenic | 35.0% |
| CAAATTAAAGCTGCTGTCTT+TGG | + | chr8_3:19514918-19514937 | None:intergenic | 35.0% | |
| ! | AGAAGCATAAGACTCAAGAA+TGG | + | chr8_3:19514967-19514986 | None:intergenic | 35.0% |
| AGAAATGTATAGAACCAGTG+TGG | - | chr8_3:19515102-19515121 | Msa1280750:intron | 35.0% | |
| CGCTAACTAACATAACAGAT+AGG | + | chr8_3:19515194-19515213 | None:intergenic | 35.0% | |
| TTAAACTGTTTATCCAGACC+AGG | + | chr8_3:19515266-19515285 | None:intergenic | 35.0% | |
| ! | TTGTGTAGGAGCATAACAAT+TGG | - | chr8_3:19515551-19515570 | Msa1280750:intron | 35.0% |
| ! | TGTGTAGGAGCATAACAATT+GGG | - | chr8_3:19515552-19515571 | Msa1280750:intron | 35.0% |
| ! | TATGTCAATCAAAGGTACAG+AGG | + | chr8_3:19515648-19515667 | None:intergenic | 35.0% |
| AATTTCAAATCGGCTGCAAT+CGG | - | chr8_3:19515763-19515782 | Msa1280750:intron | 35.0% | |
| ATTCTAGTCAGTCAATGACA+AGG | - | chr8_3:19515853-19515872 | Msa1280750:intron | 35.0% | |
| GACCGTAATGTATAACACAA+AGG | + | chr8_3:19515986-19516005 | None:intergenic | 35.0% | |
| GATGGAAAACATCGAAGAAT+GGG | + | chr8_3:19516038-19516057 | None:intergenic | 35.0% | |
| TGATGGAAAACATCGAAGAA+TGG | + | chr8_3:19516039-19516058 | None:intergenic | 35.0% | |
| AGCTAAGAAACTAGATTTGG+CGG | + | chr8_3:19516085-19516104 | None:intergenic | 35.0% | |
| GATTTCCTGTATTTGATAGG+AGG | - | chr8_3:19516342-19516361 | Msa1280750:intron | 35.0% | |
| GTATTCTCAGATGTAATCAG+AGG | - | chr8_3:19516397-19516416 | Msa1280750:intron | 35.0% | |
| AAGGGCTTCATTAAGGAATA+TGG | + | chr8_3:19516426-19516445 | None:intergenic | 35.0% | |
| ! | TTGAACCCGTTATTTCACTT+TGG | - | chr8_3:19516832-19516851 | Msa1280750:CDS | 35.0% |
| !! | AAGAGAAAGAAGTGCTTAAG+TGG | - | chr8_3:19517118-19517137 | Msa1280750:CDS | 35.0% |
| ACACATCTCTTGAGTGATAA+TGG | - | chr8_3:19517180-19517199 | Msa1280750:CDS | 35.0% | |
| !! | ACTGTTTGTGTTGGTTTCTC+GGG | + | chr8_3:19510839-19510858 | None:intergenic | 40.0% |
| TCGGGTAAAACGAAATGAAG+TGG | + | chr8_3:19510884-19510903 | None:intergenic | 40.0% | |
| TTACCCGAAAATCACGCTAA+CGG | - | chr8_3:19510896-19510915 | Msa1280750:three_prime_UTR | 40.0% | |
| GGTGTAGATAGCAAAAACGA+AGG | - | chr8_3:19510962-19510981 | Msa1280750:exon | 40.0% | |
| !!! | CGGAGTTTCGTTGTTTTTGT+TGG | + | chr8_3:19511047-19511066 | None:intergenic | 40.0% |
| GTTTCGACAATCGATTGAAG+AGG | - | chr8_3:19511168-19511187 | Msa1280750:intron | 40.0% | |
| GTGACAGAGTTCAATCTTTC+AGG | - | chr8_3:19511196-19511215 | Msa1280750:intron | 40.0% | |
| CCTTTCATCTCTTCTTCTTC+AGG | + | chr8_3:19511247-19511266 | None:intergenic | 40.0% | |
| CCTGAAGAAGAAGAGATGAA+AGG | - | chr8_3:19511244-19511263 | Msa1280750:CDS | 40.0% | |
| GAAAGAGCTACGTGAAAGAA+CGG | - | chr8_3:19511384-19511403 | Msa1280750:intron | 40.0% | |
| AAAGAGCTACGTGAAAGAAC+GGG | - | chr8_3:19511385-19511404 | Msa1280750:intron | 40.0% | |
| TTCAACGAGAAGCTTATAGG+AGG | - | chr8_3:19511433-19511452 | Msa1280750:intron | 40.0% | |
| CGAATTTGATCGGAGGTTAA+CGG | - | chr8_3:19511489-19511508 | Msa1280750:intron | 40.0% | |
| ATGAGATGGTTGGAGTTGTT+AGG | - | chr8_3:19511596-19511615 | Msa1280750:intron | 40.0% | |
| TGAGATGGTTGGAGTTGTTA+GGG | - | chr8_3:19511597-19511616 | Msa1280750:intron | 40.0% | |
| !!! | GGAGTTGTTAGGGTTTTAAG+GGG | - | chr8_3:19511607-19511626 | Msa1280750:intron | 40.0% |
| !!! | GAGTTGTTAGGGTTTTAAGG+GGG | - | chr8_3:19511608-19511627 | Msa1280750:intron | 40.0% |
| !! | ATGGCTTGTAGTTGATGAGA+AGG | - | chr8_3:19512247-19512266 | Msa1280750:intron | 40.0% |
| AACTTGAATGGGATTGTGTC+TGG | - | chr8_3:19512495-19512514 | Msa1280750:intron | 40.0% | |
| ATCCCCTGAATGTATCTAGT+TGG | + | chr8_3:19512771-19512790 | None:intergenic | 40.0% | |
| GTATCACCAATTAGTTGTGG+GGG | + | chr8_3:19513064-19513083 | None:intergenic | 40.0% | |
| CGTATCACCAATTAGTTGTG+GGG | + | chr8_3:19513065-19513084 | None:intergenic | 40.0% | |
| CACGTATCACCAATTAGTTG+TGG | + | chr8_3:19513067-19513086 | None:intergenic | 40.0% | |
| ! | CAACTAATTGGTGATACGTG+AGG | - | chr8_3:19513067-19513086 | Msa1280750:intron | 40.0% |
| CTCAAGTATCACCAAAGTTG+TGG | + | chr8_3:19513162-19513181 | None:intergenic | 40.0% | |
| ! | CACAACTTTGGTGATACTTG+AGG | - | chr8_3:19513160-19513179 | Msa1280750:intron | 40.0% |
| ! | CAACTTTGGTGATACTTGAG+GGG | - | chr8_3:19513162-19513181 | Msa1280750:intron | 40.0% |
| GTCACAATCTTGTCATGCTT+TGG | - | chr8_3:19513985-19514004 | Msa1280750:intron | 40.0% | |
| !! | CAGCAGCTTTAATTTGTGAC+AGG | - | chr8_3:19514922-19514941 | Msa1280750:intron | 40.0% |
| AAATTCTTCGCTTCGGCTAA+TGG | + | chr8_3:19515018-19515037 | None:intergenic | 40.0% | |
| ACCTACGAAATTCTTCGCTT+CGG | + | chr8_3:19515025-19515044 | None:intergenic | 40.0% | |
| CGATTGATTGTAAGCGTTAG+TGG | - | chr8_3:19515212-19515231 | Msa1280750:intron | 40.0% | |
| TTGCTATATAAAGCCTGGTC+TGG | - | chr8_3:19515250-19515269 | Msa1280750:intron | 40.0% | |
| GATGCTAAGACTAAGACGTA+GGG | + | chr8_3:19515527-19515546 | None:intergenic | 40.0% | |
| TGATGCTAAGACTAAGACGT+AGG | + | chr8_3:19515528-19515547 | None:intergenic | 40.0% | |
| AATAGAAAGCTACATCAGCG+TGG | - | chr8_3:19515669-19515688 | Msa1280750:intron | 40.0% | |
| ! | AAGGAACACACGGATTATCA+AGG | + | chr8_3:19515719-19515738 | None:intergenic | 40.0% |
| TGATAATCCGTGTGTTCCTT+TGG | - | chr8_3:19515719-19515738 | Msa1280750:intron | 40.0% | |
| AGGAAATCCAAAGGAACACA+CGG | + | chr8_3:19515729-19515748 | None:intergenic | 40.0% | |
| GCAGGAATAAGGAAATCCAA+AGG | + | chr8_3:19515738-19515757 | None:intergenic | 40.0% | |
| GAAATTGAGCAGCAGGAATA+AGG | + | chr8_3:19515749-19515768 | None:intergenic | 40.0% | |
| CCTGCTGCTCAATTTCAAAT+CGG | - | chr8_3:19515753-19515772 | Msa1280750:intron | 40.0% | |
| ! | TCGATGTTTTCCATCATCTG+TGG | - | chr8_3:19516043-19516062 | Msa1280750:intron | 40.0% |
| ! | ATGTTTTCCATCATCTGTGG+TGG | - | chr8_3:19516046-19516065 | Msa1280750:intron | 40.0% |
| TAAGAAACTAGATTTGGCGG+AGG | + | chr8_3:19516082-19516101 | None:intergenic | 40.0% | |
| AATGACTGCATGAATGACCA+TGG | + | chr8_3:19516274-19516293 | None:intergenic | 40.0% | |
| ATTCATGCAGTCATTAGCGT+CGG | - | chr8_3:19516279-19516298 | Msa1280750:intron | 40.0% | |
| ! | GTCCAGAAGGTGTAATTGAT+AGG | - | chr8_3:19516304-19516323 | Msa1280750:intron | 40.0% |
| CTCCTATCAATTACACCTTC+TGG | + | chr8_3:19516309-19516328 | None:intergenic | 40.0% | |
| GATGTCCTCCTATCAAATAC+AGG | + | chr8_3:19516350-19516369 | None:intergenic | 40.0% | |
| AGTGCTAAAGGGCTTCATTA+AGG | + | chr8_3:19516433-19516452 | None:intergenic | 40.0% | |
| TTAATGAAGCCCTTTAGCAC+TGG | - | chr8_3:19516432-19516451 | Msa1280750:intron | 40.0% | |
| ! | ACCTGTTTCTTACAAACTGC+AGG | - | chr8_3:19516795-19516814 | Msa1280750:CDS | 40.0% |
| ACCTGCAGTTTGTAAGAAAC+AGG | + | chr8_3:19516799-19516818 | None:intergenic | 40.0% | |
| GTGAAAAGAACCTCACGTTT+GGG | + | chr8_3:19516882-19516901 | None:intergenic | 40.0% | |
| !! | GTCACTAGACCAGCTTTATT+AGG | + | chr8_3:19517162-19517181 | None:intergenic | 40.0% |
| CGTTGTTAGTAACGGTTTCG+TGG | + | chr8_3:19510922-19510941 | None:intergenic | 45.0% | |
| ! | TTGGTTTGATAAGTCTCCGG+TGG | + | chr8_3:19511028-19511047 | None:intergenic | 45.0% |
| GAAGAATCACGTTCTTCTCG+AGG | - | chr8_3:19511266-19511285 | Msa1280750:CDS | 45.0% | |
| TGAAAGAACGGGAACGGTTT+CGG | - | chr8_3:19511396-19511415 | Msa1280750:intron | 45.0% | |
| GAAACAGCGGCGAATTTGAT+CGG | - | chr8_3:19511479-19511498 | Msa1280750:intron | 45.0% | |
| TAATCATAACCGTACACCGG+CGG | + | chr8_3:19511556-19511575 | None:intergenic | 45.0% | |
| !!! | GGTTTTAAGGGGGAGATTGT+TGG | - | chr8_3:19511618-19511637 | Msa1280750:intron | 45.0% |
| !! | GGAGATTGTTGGTTCAGGAT+CGG | - | chr8_3:19511629-19511648 | Msa1280750:intron | 45.0% |
| !! | TGTTGGTTCAGGATCGGATA+AGG | - | chr8_3:19511635-19511654 | Msa1280750:intron | 45.0% |
| ! | CATGGAGAAGCTTTTGGATG+TGG | - | chr8_3:19512346-19512365 | Msa1280750:intron | 45.0% |
| AAATGATGAGGGGCTCTATG+TGG | - | chr8_3:19512447-19512466 | Msa1280750:intron | 45.0% | |
| GGAGGGGACATAGATTATGA+GGG | - | chr8_3:19512587-19512606 | Msa1280750:intron | 45.0% | |
| ACAATGAGAAGTGGGGAATC+CGG | - | chr8_3:19512711-19512730 | Msa1280750:intron | 45.0% | |
| ! | TCACGTATCGACAAGTTGTG+GGG | + | chr8_3:19512994-19513013 | None:intergenic | 45.0% |
| ! | CTCACGTATCGACAAGTTGT+GGG | + | chr8_3:19512995-19513014 | None:intergenic | 45.0% |
| CACAACTTGTCGATACGTGA+GGG | - | chr8_3:19512994-19513013 | Msa1280750:intron | 45.0% | |
| ACAACTTGTCGATACGTGAG+GGG | - | chr8_3:19512995-19513014 | Msa1280750:intron | 45.0% | |
| CTTCAACCCCCACAACTAAT+TGG | - | chr8_3:19513055-19513074 | Msa1280750:intron | 45.0% | |
| ! | TTGTCATGCTTTGGCTCGTT+CGG | - | chr8_3:19513994-19514013 | Msa1280750:intron | 45.0% |
| !! | ATGATGGATGAAGTGCTTCC+TGG | + | chr8_3:19514705-19514724 | None:intergenic | 45.0% |
| ACTAAGACGTAGGGCCTATT+TGG | + | chr8_3:19515518-19515537 | None:intergenic | 45.0% | |
| ! | CCGATTTGAAATTGAGCAGC+AGG | + | chr8_3:19515756-19515775 | None:intergenic | 45.0% |
| TTCATGCAGTCATTAGCGTC+GGG | - | chr8_3:19516280-19516299 | Msa1280750:intron | 45.0% | |
| CGCTTATCTCCAGTGCTAAA+GGG | + | chr8_3:19516444-19516463 | None:intergenic | 45.0% | |
| ! | CCTTTAGCACTGGAGATAAG+CGG | - | chr8_3:19516442-19516461 | Msa1280750:intron | 45.0% |
| CAAAATCTAGCCCAAACGTG+AGG | - | chr8_3:19516869-19516888 | Msa1280750:CDS | 45.0% | |
| GGTGAAAAGAACCTCACGTT+TGG | + | chr8_3:19516883-19516902 | None:intergenic | 45.0% | |
| GATGGACAGTTCTCTTCTCT+AGG | + | chr8_3:19516975-19516994 | None:intergenic | 45.0% | |
| ! | TGCAGGTTCAGTGGTGATTT+TGG | - | chr8_3:19517093-19517112 | Msa1280750:CDS | 45.0% |
| !! | ATATTATATATAAACTATTT+AGG | + | chr8_3:19516496-19516515 | None:intergenic | 5.0% |
| !!! | TTTTCAAAAAAAAAAAAAAA+AGG | - | chr8_3:19517371-19517390 | Msa1280750:CDS | 5.0% |
| ! | TGGCCGTTAGCGTGATTTTC+GGG | + | chr8_3:19510902-19510921 | None:intergenic | 50.0% |
| ! | GTGGCCGTTAGCGTGATTTT+CGG | + | chr8_3:19510903-19510922 | None:intergenic | 50.0% |
| ! | TGGAACTGGTGTTGGGAGAA+GGG | + | chr8_3:19511008-19511027 | None:intergenic | 50.0% |
| TGATAAGTCTCCGGTGGAAC+TGG | + | chr8_3:19511022-19511041 | None:intergenic | 50.0% | |
| GCTACGTGAAAGAACGGGAA+CGG | - | chr8_3:19511390-19511409 | Msa1280750:intron | 50.0% | |
| TGATCGGAGGTTAACGGAGA+TGG | - | chr8_3:19511495-19511514 | Msa1280750:intron | 50.0% | |
| AGATGATCGGACGGATGAGA+TGG | - | chr8_3:19511582-19511601 | Msa1280750:intron | 50.0% | |
| !! | AAGGGGGAGATTGTTGGTTC+AGG | - | chr8_3:19511624-19511643 | Msa1280750:intron | 50.0% |
| TGGTTCAGGATCGGATAAGG+AGG | - | chr8_3:19511638-19511657 | Msa1280750:intron | 50.0% | |
| GAATGGGATTGTGTCTGGTC+TGG | - | chr8_3:19512500-19512519 | Msa1280750:intron | 50.0% | |
| AAAAGGAAGGGGTTGGGACT+TGG | - | chr8_3:19512565-19512584 | Msa1280750:intron | 50.0% | |
| AAAGGAAGGGGTTGGGACTT+GGG | - | chr8_3:19512566-19512585 | Msa1280750:intron | 50.0% | |
| GGGAGGGGACATAGATTATG+AGG | - | chr8_3:19512586-19512605 | Msa1280750:intron | 50.0% | |
| AAGGATCGGGATTCGAACTC+CGG | + | chr8_3:19512733-19512752 | None:intergenic | 50.0% | |
| ! | CACGTATCGACAAGTTGTGG+GGG | + | chr8_3:19512993-19513012 | None:intergenic | 50.0% |
| ! | CCTCACGTATCGACAAGTTG+TGG | + | chr8_3:19512996-19513015 | None:intergenic | 50.0% |
| CCACAACTTGTCGATACGTG+AGG | - | chr8_3:19512993-19513012 | Msa1280750:intron | 50.0% | |
| TAAGTGTGTGAGTCTGACCG+TGG | + | chr8_3:19514030-19514049 | None:intergenic | 50.0% | |
| CACTGCACTGCACCTATCTT+TGG | + | chr8_3:19514608-19514627 | None:intergenic | 50.0% | |
| GCCGAAGCGAAGAATTTCGT+AGG | - | chr8_3:19515021-19515040 | Msa1280750:intron | 50.0% | |
| GACGTAGGGCCTATTTGGAT+TGG | + | chr8_3:19515513-19515532 | None:intergenic | 50.0% | |
| TAGGAAGCCACCACAGATGA+TGG | + | chr8_3:19516056-19516075 | None:intergenic | 50.0% | |
| TCATCTGTGGTGGCTTCCTA+TGG | - | chr8_3:19516056-19516075 | Msa1280750:intron | 50.0% | |
| CCGCTTATCTCCAGTGCTAA+AGG | + | chr8_3:19516445-19516464 | None:intergenic | 50.0% | |
| AGAGAACTGTCCATCTCGTG+CGG | - | chr8_3:19516980-19516999 | Msa1280750:CDS | 50.0% | |
| ACTTGAACATCCGCACGAGA+TGG | + | chr8_3:19516993-19517012 | None:intergenic | 50.0% | |
| ATCTCGTGCGGATGTTCAAG+TGG | - | chr8_3:19516992-19517011 | Msa1280750:CDS | 50.0% | |
| TCTTGAGTAGTGGCAGCCAA+AGG | - | chr8_3:19517246-19517265 | Msa1280750:CDS | 50.0% | |
| ! | GGTGTTGGGAGAAGGGAATG+AGG | + | chr8_3:19511001-19511020 | None:intergenic | 55.0% |
| ! | GTGGAACTGGTGTTGGGAGA+AGG | + | chr8_3:19511009-19511028 | None:intergenic | 55.0% |
| TCTCCCAACACCAGTTCCAC+CGG | - | chr8_3:19511009-19511028 | Msa1280750:CDS | 55.0% | |
| TCTCCGGTGGAACTGGTGTT+GGG | + | chr8_3:19511015-19511034 | None:intergenic | 55.0% | |
| GAAATCCGGCATGGTTCCTC+CGG | + | chr8_3:19511086-19511105 | None:intergenic | 55.0% | |
| GGAGGAACCATGCCGGATTT+CGG | - | chr8_3:19511085-19511104 | Msa1280750:CDS | 55.0% | |
| CGGATGAACGTGCCGAAATC+CGG | + | chr8_3:19511100-19511119 | None:intergenic | 55.0% | |
| TCGGCACGTTCATCCGTCAA+AGG | - | chr8_3:19511104-19511123 | Msa1280750:CDS | 55.0% | |
| ! | TCTTTCAGGTCTCAGCGTCG+TGG | - | chr8_3:19511210-19511229 | Msa1280750:intron | 55.0% |
| ACAGCGGCGAATTTGATCGG+AGG | - | chr8_3:19511482-19511501 | Msa1280750:intron | 55.0% | |
| TCGGAGGTTAACGGAGATGG+TGG | - | chr8_3:19511498-19511517 | Msa1280750:intron | 55.0% | |
| ! | GAGGTTAACGGAGATGGTGG+TGG | - | chr8_3:19511501-19511520 | Msa1280750:intron | 55.0% |
| !! | GTTAACGGAGATGGTGGTGG+AGG | - | chr8_3:19511504-19511523 | Msa1280750:intron | 55.0% |
| !! | ATGGTGGTGGAGGAATACGC+CGG | - | chr8_3:19511514-19511533 | Msa1280750:intron | 55.0% |
| GATCGGACGGATGAGATGGT+TGG | - | chr8_3:19511586-19511605 | Msa1280750:intron | 55.0% | |
| CTTCAAGTGCGCGCGTAATG+AGG | - | chr8_3:19511720-19511739 | Msa1280750:intron | 55.0% | |
| ! | ATGCTTTGGCTCGTTCGGCA+CGG | - | chr8_3:19513999-19514018 | Msa1280750:intron | 55.0% |
| ATCGGCTGCAATCGGTCATC+AGG | - | chr8_3:19515771-19515790 | Msa1280750:intron | 55.0% | |
| CTAGATTTGGCGGAGGCCAT+AGG | + | chr8_3:19516075-19516094 | None:intergenic | 55.0% | |
| ! | ATTAGCGTCGGGAGTCCAGA+AGG | - | chr8_3:19516291-19516310 | Msa1280750:intron | 55.0% |
| CACTGGAGATAAGCGGTCAG+AGG | - | chr8_3:19516449-19516468 | Msa1280750:intron | 55.0% | |
| ! | GGTTCCGTGCCGTTAGCTTC+GGG | + | chr8_3:19510818-19510837 | None:intergenic | 60.0% |
| ! | GGGTTCCGTGCCGTTAGCTT+CGG | + | chr8_3:19510819-19510838 | None:intergenic | 60.0% |
| GTCTCCGGTGGAACTGGTGT+TGG | + | chr8_3:19511016-19511035 | None:intergenic | 60.0% | |
| GAACGTGCCGAAATCCGGCA+TGG | + | chr8_3:19511095-19511114 | None:intergenic | 60.0% | |
| GAAGGGGTTGGGACTTGGGA+GGG | - | chr8_3:19512570-19512589 | Msa1280750:intron | 60.0% | |
| AAGGGGTTGGGACTTGGGAG+GGG | - | chr8_3:19512571-19512590 | Msa1280750:intron | 60.0% | |
| CGTTCGGCACGGCATTTCCA+CGG | - | chr8_3:19514010-19514029 | Msa1280750:intron | 60.0% | |
| GGGTCCCGAAGCTAACGGCA+CGG | - | chr8_3:19510811-19510830 | Msa1280750:three_prime_UTR | 65.0% | |
| CCGGCGACGGAGAAGCTAGT+CGG | + | chr8_3:19511067-19511086 | None:intergenic | 65.0% | |
| !! | CCGACTAGCTTCTCCGTCGC+CGG | - | chr8_3:19511064-19511083 | Msa1280750:CDS | 65.0% |
| ! | ACTAGCTTCTCCGTCGCCGG+AGG | - | chr8_3:19511067-19511086 | Msa1280750:CDS | 65.0% |
| !! | CGGCACTGGCGCATCGTTAC+CGG | + | chr8_3:19511536-19511555 | None:intergenic | 65.0% |
| TAACGATGCGCCAGTGCCGC+CGG | - | chr8_3:19511537-19511556 | Msa1280750:intron | 65.0% | |
| TAACCGTACACCGGCGGCAC+TGG | + | chr8_3:19511550-19511569 | None:intergenic | 65.0% | |
| GGAAGGGGTTGGGACTTGGG+AGG | - | chr8_3:19512569-19512588 | Msa1280750:intron | 65.0% | |
| CGGCATGGTTCCTCCGGCGA+CGG | + | chr8_3:19511080-19511099 | None:intergenic | 70.0% | |
| CGTCGCCGGAGGAACCATGC+CGG | - | chr8_3:19511078-19511097 | Msa1280750:CDS | 70.0% | |
| GCGCCAGTGCCGCCGGTGTA+CGG | - | chr8_3:19511544-19511563 | Msa1280750:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 19510809 | 19517420 | 19510809 | ID=Msa1280750;Name=Msa1280750 |
| chr8_3 | mRNA | 19510809 | 19517420 | 19510809 | ID=Msa1280750-mRNA-1;Parent=Msa1280750;Name=Msa1280750-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|0.8|0.5|1|1|1|6|169|615 |
| chr8_3 | exon | 19510809 | 19511131 | 19510809 | ID=Msa1280750-mRNA-1:exon:7265;Parent=Msa1280750-mRNA-1 |
| chr8_3 | exon | 19511216 | 19511397 | 19511216 | ID=Msa1280750-mRNA-1:exon:7264;Parent=Msa1280750-mRNA-1 |
| chr8_3 | exon | 19511759 | 19512050 | 19511759 | ID=Msa1280750-mRNA-1:exon:7263;Parent=Msa1280750-mRNA-1 |
| chr8_3 | exon | 19513187 | 19513417 | 19513187 | ID=Msa1280750-mRNA-1:exon:7262;Parent=Msa1280750-mRNA-1 |
| chr8_3 | exon | 19513497 | 19513552 | 19513497 | ID=Msa1280750-mRNA-1:exon:7261;Parent=Msa1280750-mRNA-1 |
| chr8_3 | exon | 19516488 | 19517420 | 19516488 | ID=Msa1280750-mRNA-1:exon:7260;Parent=Msa1280750-mRNA-1 |
| chr8_3 | CDS | 19516488 | 19517420 | 19516488 | ID=Msa1280750-mRNA-1:cds;Parent=Msa1280750-mRNA-1 |
| chr8_3 | CDS | 19513497 | 19513552 | 19513497 | ID=Msa1280750-mRNA-1:cds;Parent=Msa1280750-mRNA-1 |
| chr8_3 | CDS | 19513187 | 19513417 | 19513187 | ID=Msa1280750-mRNA-1:cds;Parent=Msa1280750-mRNA-1 |
| chr8_3 | CDS | 19511759 | 19512050 | 19511759 | ID=Msa1280750-mRNA-1:cds;Parent=Msa1280750-mRNA-1 |
| chr8_3 | CDS | 19511216 | 19511397 | 19511216 | ID=Msa1280750-mRNA-1:cds;Parent=Msa1280750-mRNA-1 |
| chr8_3 | CDS | 19510978 | 19511131 | 19510978 | ID=Msa1280750-mRNA-1:cds;Parent=Msa1280750-mRNA-1 |
| chr8_3 | three_prime_UTR | 19510809 | 19510977 | 19510809 | ID=Msa1280750-mRNA-1:three_prime_utr;Parent=Msa1280750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
