Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1239400 | XP_013444988.1 | 95.994 | 624 | 23 | 2 | 1 | 623 | 1 | 623 | 0.0 | 1181 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015090 | Msa1239400 | 0.800566 | 1.357338e-48 | -8.615850e-47 |
| Msa0092410 | Msa1239400 | 0.804747 | 1.862621e-49 | -8.615850e-47 |
| Msa0096700 | Msa1239400 | 0.800689 | 1.280738e-48 | -8.615850e-47 |
| Msa0111080 | Msa1239400 | 0.800769 | 1.233622e-48 | -8.615850e-47 |
| Msa0703910 | Msa1239400 | 0.803957 | 2.720406e-49 | -8.615850e-47 |
| Msa0763920 | Msa1239400 | 0.800049 | 1.728950e-48 | -8.615850e-47 |
| Msa0775560 | Msa1239400 | 0.804997 | 1.651398e-49 | -8.615850e-47 |
| Msa0812950 | Msa1239400 | 0.827007 | 1.983955e-54 | -8.615850e-47 |
| Msa0828200 | Msa1239400 | 0.803568 | 3.276980e-49 | -8.615850e-47 |
| Msa0222980 | Msa1239400 | 0.802370 | 5.795027e-49 | -8.615850e-47 |
| Msa0227360 | Msa1239400 | 0.812612 | 3.884224e-51 | -8.615850e-47 |
| Msa1229610 | Msa1239400 | 0.801635 | 8.204689e-49 | -8.615850e-47 |
| Msa1239400 | Msa1270660 | 0.823651 | 1.235135e-53 | -8.615850e-47 |
| Msa1239400 | Msa1270730 | 0.824094 | 9.722916e-54 | -8.615850e-47 |
| Msa1239400 | Msa1280750 | 0.808979 | 2.373366e-50 | -8.615850e-47 |
| Msa1239400 | Msa1285260 | 0.820399 | 7.000844e-53 | -8.615850e-47 |
| Msa1239400 | Msa1310220 | 0.801432 | 9.030708e-49 | -8.615850e-47 |
| Msa1239400 | Msa1325430 | 0.801954 | 7.055014e-49 | -8.615850e-47 |
| Msa1239400 | Msa1335230 | 0.840964 | 6.332775e-58 | -8.615850e-47 |
| Msa1239400 | Msa1355890 | 0.808363 | 3.213693e-50 | -8.615850e-47 |
| Msa1239400 | Msa1378680 | 0.828232 | 1.008230e-54 | -8.615850e-47 |
| Msa1239400 | Msa1421210 | 0.802799 | 4.725114e-49 | -8.615850e-47 |
| Msa1239400 | Msa1423540 | 0.804890 | 1.738055e-49 | -8.615850e-47 |
| Msa1239400 | Msa1423820 | 0.833105 | 6.454479e-56 | -8.615850e-47 |
| Msa1239400 | Msa1430130 | 0.819928 | 8.974995e-53 | -8.615850e-47 |
| Msa1239400 | Msa1437130 | 0.807383 | 5.190983e-50 | -8.615850e-47 |
| Msa1239400 | Msa1438840 | 0.800761 | 1.238167e-48 | -8.615850e-47 |
| Msa1239400 | Msa1460750 | 0.819424 | 1.169981e-52 | -8.615850e-47 |
| Msa0364790 | Msa1239400 | 0.809779 | 1.598377e-50 | -8.615850e-47 |
| Msa0397250 | Msa1239400 | 0.829648 | 4.577629e-55 | -8.615850e-47 |
| Msa0403490 | Msa1239400 | 0.812785 | 3.560085e-51 | -8.615850e-47 |
| Msa0427580 | Msa1239400 | 0.840196 | 1.006039e-57 | -8.615850e-47 |
| Msa0448610 | Msa1239400 | 0.809724 | 1.642660e-50 | -8.615850e-47 |
| Msa0481030 | Msa1239400 | 0.805913 | 1.061080e-49 | -8.615850e-47 |
| Msa1054510 | Msa1239400 | 0.803106 | 4.084739e-49 | -8.615850e-47 |
| Msa0262370 | Msa1239400 | 0.812025 | 5.217472e-51 | -8.615850e-47 |
| Msa0300150 | Msa1239400 | 0.804139 | 2.492789e-49 | -8.615850e-47 |
| Msa0302840 | Msa1239400 | 0.818899 | 1.540227e-52 | -8.615850e-47 |
| Msa1107200 | Msa1239400 | 0.803267 | 3.782041e-49 | -8.615850e-47 |
| Msa1107260 | Msa1239400 | 0.810523 | 1.105034e-50 | -8.615850e-47 |
| Msa1150900 | Msa1239400 | 0.805553 | 1.262721e-49 | -8.615850e-47 |
| Msa1185460 | Msa1239400 | 0.876602 | 1.225265e-68 | -8.615850e-47 |
| Msa1187590 | Msa1239400 | 0.804334 | 2.271095e-49 | -8.615850e-47 |
| Msa1208370 | Msa1239400 | 0.806685 | 7.294119e-50 | -8.615850e-47 |
| Msa1209190 | Msa1239400 | 0.808393 | 3.165853e-50 | -8.615850e-47 |
| Msa1209860 | Msa1239400 | 0.818439 | 1.959473e-52 | -8.615850e-47 |
| Msa0496970 | Msa1239400 | 0.822731 | 2.025393e-53 | -8.615850e-47 |
| Msa0518170 | Msa1239400 | 0.832239 | 1.058649e-55 | -8.615850e-47 |
| Msa0566350 | Msa1239400 | 0.803432 | 3.495222e-49 | -8.615850e-47 |
| Msa0566750 | Msa1239400 | 0.803844 | 2.871410e-49 | -8.615850e-47 |
| Msa0844610 | Msa1239400 | 0.801927 | 7.145349e-49 | -8.615850e-47 |
| Msa0853440 | Msa1239400 | 0.804836 | 1.784273e-49 | -8.615850e-47 |
| Msa0902830 | Msa1239400 | 0.802824 | 4.670255e-49 | -8.615850e-47 |
| Msa0921420 | Msa1239400 | 0.804658 | 1.944005e-49 | -8.615850e-47 |
| Msa0960390 | Msa1239400 | 0.804086 | 2.557396e-49 | -8.615850e-47 |
| Msa0970480 | Msa1239400 | 0.800155 | 1.645446e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1239400 | MtrunA17_Chr8g0351061 | 95.994 | 624 | 23 | 2 | 1 | 623 | 1 | 623 | 0.0 | 1181 |
| Msa1239400 | MtrunA17_Chr1g0163291 | 59.937 | 634 | 209 | 10 | 1 | 623 | 1 | 600 | 0.0 | 753 |
| Msa1239400 | MtrunA17_Chr3g0115381 | 41.737 | 472 | 270 | 5 | 154 | 622 | 287 | 756 | 1.12e-129 | 399 |
| Msa1239400 | MtrunA17_Chr5g0424991 | 40.447 | 403 | 192 | 4 | 154 | 509 | 505 | 906 | 3.53e-93 | 306 |
| Msa1239400 | MtrunA17_Chr5g0403231 | 34.831 | 178 | 105 | 3 | 408 | 577 | 395 | 569 | 5.68e-24 | 106 |
| Msa1239400 | MtrunA17_Chr8g0373901 | 33.889 | 180 | 108 | 3 | 408 | 579 | 398 | 574 | 2.28e-22 | 101 |
| Msa1239400 | MtrunA17_Chr5g0425001 | 38.095 | 126 | 73 | 3 | 502 | 623 | 5 | 129 | 1.39e-20 | 88.2 |
| Msa1239400 | MtrunA17_Chr4g0034351 | 31.844 | 179 | 113 | 4 | 408 | 579 | 389 | 565 | 2.19e-19 | 92.4 |
| Msa1239400 | MtrunA17_Chr5g0399331 | 25.926 | 243 | 161 | 6 | 360 | 590 | 301 | 536 | 3.55e-18 | 88.2 |
| Msa1239400 | MtrunA17_Chr3g0133631 | 30.412 | 194 | 122 | 5 | 414 | 598 | 347 | 536 | 1.21e-14 | 77.0 |
| Msa1239400 | MtrunA17_Chr5g0402501 | 29.714 | 175 | 116 | 4 | 418 | 588 | 332 | 503 | 1.72e-14 | 76.6 |
| Msa1239400 | MtrunA17_Chr1g0153951 | 30.159 | 189 | 115 | 6 | 418 | 598 | 334 | 513 | 2.04e-14 | 76.3 |
| Msa1239400 | MtrunA17_Chr5g0435281 | 29.333 | 225 | 140 | 5 | 382 | 592 | 251 | 470 | 1.12e-13 | 73.9 |
| Msa1239400 | MtrunA17_Chr4g0028651 | 29.605 | 152 | 98 | 2 | 408 | 552 | 465 | 614 | 1.20e-12 | 70.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1239400 | AT3G11920.1 | 55.908 | 567 | 234 | 6 | 64 | 623 | 73 | 630 | 0.0 | 633 |
| Msa1239400 | AT4G08550.2 | 41.509 | 477 | 265 | 7 | 154 | 623 | 222 | 691 | 3.54e-122 | 377 |
| Msa1239400 | AT4G08550.1 | 37.185 | 476 | 233 | 8 | 154 | 623 | 222 | 637 | 1.69e-96 | 309 |
| Msa1239400 | AT3G13000.1 | 30.973 | 226 | 142 | 5 | 388 | 606 | 303 | 521 | 4.62e-25 | 110 |
| Msa1239400 | AT3G13000.3 | 30.973 | 226 | 142 | 5 | 388 | 606 | 332 | 550 | 5.69e-25 | 110 |
| Msa1239400 | AT3G13000.2 | 30.973 | 226 | 142 | 5 | 388 | 606 | 332 | 550 | 5.69e-25 | 110 |
| Msa1239400 | AT1G16750.1 | 32.407 | 216 | 134 | 5 | 391 | 600 | 285 | 494 | 9.52e-25 | 108 |
| Msa1239400 | AT5G66600.2 | 31.461 | 178 | 113 | 2 | 408 | 579 | 365 | 539 | 6.68e-24 | 106 |
| Msa1239400 | AT5G66600.7 | 31.461 | 178 | 113 | 2 | 408 | 579 | 331 | 505 | 7.14e-24 | 106 |
| Msa1239400 | AT5G66600.14 | 31.461 | 178 | 113 | 2 | 408 | 579 | 385 | 559 | 7.58e-24 | 106 |
| Msa1239400 | AT5G66600.1 | 31.461 | 178 | 113 | 2 | 408 | 579 | 385 | 559 | 7.58e-24 | 106 |
| Msa1239400 | AT5G66600.4 | 31.461 | 178 | 113 | 2 | 408 | 579 | 385 | 559 | 7.58e-24 | 106 |
| Msa1239400 | AT5G66600.9 | 31.461 | 178 | 113 | 2 | 408 | 579 | 385 | 559 | 7.58e-24 | 106 |
| Msa1239400 | AT5G66600.3 | 31.461 | 178 | 113 | 2 | 408 | 579 | 385 | 559 | 7.58e-24 | 106 |
| Msa1239400 | AT2G23700.1 | 30.455 | 220 | 137 | 5 | 383 | 594 | 457 | 668 | 1.10e-19 | 94.0 |
| Msa1239400 | AT5G47380.5 | 30.131 | 229 | 136 | 8 | 376 | 590 | 272 | 490 | 2.75e-18 | 89.0 |
| Msa1239400 | AT5G47380.1 | 30.131 | 229 | 136 | 8 | 376 | 590 | 328 | 546 | 3.59e-18 | 89.0 |
| Msa1239400 | AT5G47380.4 | 30.131 | 229 | 136 | 8 | 376 | 590 | 328 | 546 | 3.78e-18 | 89.0 |
| Msa1239400 | AT5G42690.3 | 32.323 | 198 | 118 | 8 | 408 | 598 | 265 | 453 | 8.37e-18 | 87.0 |
| Msa1239400 | AT5G42690.5 | 32.323 | 198 | 118 | 8 | 408 | 598 | 290 | 478 | 9.56e-18 | 87.0 |
| Msa1239400 | AT5G42690.1 | 32.323 | 198 | 118 | 8 | 408 | 598 | 316 | 504 | 1.02e-17 | 87.0 |
| Msa1239400 | AT5G42690.2 | 32.323 | 198 | 118 | 8 | 408 | 598 | 317 | 505 | 1.04e-17 | 87.0 |
| Msa1239400 | AT5G42690.4 | 32.323 | 198 | 118 | 8 | 408 | 598 | 317 | 505 | 1.04e-17 | 87.0 |
| Msa1239400 | AT3G18900.6 | 29.870 | 154 | 101 | 1 | 408 | 554 | 225 | 378 | 1.58e-17 | 85.9 |
| Msa1239400 | AT3G18900.3 | 29.870 | 154 | 101 | 1 | 408 | 554 | 225 | 378 | 1.58e-17 | 85.9 |
| Msa1239400 | AT3G18900.4 | 29.870 | 154 | 101 | 1 | 408 | 554 | 306 | 459 | 1.81e-17 | 86.3 |
| Msa1239400 | AT3G18900.5 | 29.870 | 154 | 101 | 1 | 408 | 554 | 301 | 454 | 1.84e-17 | 86.3 |
| Msa1239400 | AT5G66600.12 | 33.846 | 130 | 80 | 1 | 408 | 531 | 385 | 514 | 1.30e-16 | 83.6 |
| Msa1239400 | AT5G66600.11 | 33.846 | 130 | 80 | 1 | 408 | 531 | 385 | 514 | 1.30e-16 | 83.6 |
| Msa1239400 | AT5G66600.6 | 33.846 | 130 | 80 | 1 | 408 | 531 | 385 | 514 | 1.30e-16 | 83.6 |
| Msa1239400 | AT5G66600.13 | 33.846 | 130 | 80 | 1 | 408 | 531 | 385 | 514 | 1.30e-16 | 83.6 |
| Msa1239400 | AT1G16750.2 | 42.857 | 98 | 52 | 1 | 391 | 488 | 285 | 378 | 3.62e-16 | 81.6 |
| Msa1239400 | AT4G37080.2 | 30.180 | 222 | 128 | 9 | 389 | 596 | 366 | 574 | 5.95e-15 | 78.6 |
| Msa1239400 | AT4G37080.3 | 30.180 | 222 | 128 | 9 | 389 | 596 | 366 | 574 | 5.95e-15 | 78.6 |
| Msa1239400 | AT4G37080.1 | 30.180 | 222 | 128 | 9 | 389 | 596 | 353 | 561 | 6.13e-15 | 78.6 |
| Msa1239400 | AT3G18900.1 | 30.534 | 131 | 84 | 1 | 408 | 531 | 306 | 436 | 1.35e-13 | 73.9 |
| Msa1239400 | AT5G47380.2 | 33.721 | 172 | 93 | 5 | 376 | 534 | 328 | 491 | 1.73e-13 | 73.6 |
| Msa1239400 | AT2G39690.2 | 28.293 | 205 | 138 | 6 | 414 | 613 | 200 | 400 | 2.55e-13 | 72.8 |
| Msa1239400 | AT2G39690.4 | 28.293 | 205 | 138 | 6 | 414 | 613 | 281 | 481 | 2.65e-13 | 73.2 |
| Msa1239400 | AT2G39690.5 | 28.293 | 205 | 138 | 6 | 414 | 613 | 307 | 507 | 2.81e-13 | 73.2 |
| Msa1239400 | AT5G47380.3 | 33.533 | 167 | 90 | 5 | 376 | 529 | 328 | 486 | 4.79e-13 | 72.4 |
| Msa1239400 | AT1G43020.1 | 30.337 | 178 | 105 | 5 | 398 | 564 | 202 | 371 | 5.61e-13 | 72.0 |
| Msa1239400 | AT2G39690.8 | 26.887 | 212 | 131 | 6 | 414 | 613 | 281 | 480 | 1.18e-12 | 71.2 |
| Msa1239400 | AT2G39690.1 | 26.887 | 212 | 131 | 6 | 414 | 613 | 307 | 506 | 1.28e-12 | 70.9 |
| Msa1239400 | AT1G76620.1 | 29.064 | 203 | 120 | 8 | 394 | 581 | 278 | 471 | 1.26e-11 | 67.8 |
Find 138 sgRNAs with CRISPR-Local
Find 348 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATGATTTCCTGTATTTAAT+TGG | 0.152945 | 8_2:+21110071 | Msa1239400:CDS |
| GAAATGAAGTGGGTTATTTA+TGG | 0.153498 | 8_2:-21104594 | None:intergenic |
| GTGACAGAGTTCAATCTTTC+AGG | 0.192781 | 8_2:+21104923 | Msa1239400:CDS |
| TTTATATGAATTATCTGTTT+TGG | 0.219872 | 8_2:-21110940 | None:intergenic |
| ATTAAAGCATTTGTGGATAA+AGG | 0.223252 | 8_2:-21108617 | None:intergenic |
| CAAATTAAAGCTGCTGTCTT+TGG | 0.259547 | 8_2:-21108667 | None:intergenic |
| CGGCACCGGCGCATCGTTAC+CGG | 0.273842 | 8_2:-21105266 | None:intergenic |
| AAATTCTTCGCTTCGGCTAA+TGG | 0.290330 | 8_2:-21108767 | None:intergenic |
| TTAATGACCAATCAAAATTC+TGG | 0.292429 | 8_2:-21110870 | None:intergenic |
| ATCTCTTCATCTTCATCTTC+AGG | 0.298421 | 8_2:-21104971 | None:intergenic |
| ATCCGGCATGGTTCCGGTTC+CGG | 0.299342 | 8_2:-21104807 | None:intergenic |
| AACTGTTTGTGTTGGTTTCT+CGG | 0.301988 | 8_2:-21104561 | None:intergenic |
| CTTTGGTTCATTGTCATTTA+CGG | 0.306062 | 8_2:-21108650 | None:intergenic |
| AAATGAAGTGGGTTATTTAT+GGG | 0.308679 | 8_2:-21104593 | None:intergenic |
| ATCACTCAAATTCTTTCCTT+TGG | 0.312487 | 8_2:-21110911 | None:intergenic |
| GTCACTAGACCAGCTTTATT+AGG | 0.316643 | 8_2:-21110808 | None:intergenic |
| CGCGAAAATTAAAGCATTTG+TGG | 0.321838 | 8_2:-21108624 | None:intergenic |
| TTCTTCAACGAGAAGCTTAT+AGG | 0.322872 | 8_2:+21105163 | Msa1239400:CDS |
| GGGTTCCGTGCCGTTAGCTT+CGG | 0.329454 | 8_2:-21104540 | None:intergenic |
| CTCCGATCAATTACACCTTC+TGG | 0.333359 | 8_2:-21110038 | None:intergenic |
| ATGAGATGGTTGGAGTTGTT+AGG | 0.334069 | 8_2:+21105329 | Msa1239400:CDS |
| TGCAGGTTCAGTGGTGATTT+CGG | 0.340645 | 8_2:+21110742 | Msa1239400:intron |
| TTAAAGCATTTGTGGATAAA+GGG | 0.347812 | 8_2:-21108616 | None:intergenic |
| ACCGGAACCATGCCGGATTT+CGG | 0.348744 | 8_2:+21104812 | Msa1239400:CDS |
| GCCGAAATCCGGCATGGTTC+CGG | 0.349217 | 8_2:-21104813 | None:intergenic |
| ATGATGGATGAAGTGCTTCC+TGG | 0.361470 | 8_2:-21108454 | None:intergenic |
| ACACATCTCTTGAGTGATAA+TGG | 0.362434 | 8_2:+21110829 | Msa1239400:CDS |
| CGCTTATCTCCGGTGCTAAA+GGG | 0.377739 | 8_2:-21110173 | None:intergenic |
| ATTTCTTAGGCTGTTGAAAT+CGG | 0.379144 | 8_2:+21108420 | Msa1239400:intron |
| TTCTGGTAAGATATATTAAC+AGG | 0.382018 | 8_2:-21110853 | None:intergenic |
| CCGCTTATCTCCGGTGCTAA+AGG | 0.385139 | 8_2:-21110174 | None:intergenic |
| AGCTTCTCCGTCGCCGGAAC+CGG | 0.388996 | 8_2:+21104794 | Msa1239400:CDS |
| GGTGCTAAAGGGCTTCATTA+AGG | 0.396381 | 8_2:-21110162 | None:intergenic |
| TGAAAGAACGGGAACGGTTT+CGG | 0.399804 | 8_2:+21105129 | Msa1239400:CDS |
| TGAGATGGTTGGAGTTGTTA+GGG | 0.400490 | 8_2:+21105330 | Msa1239400:CDS |
| CGGATGAACGTGCCGAAATC+CGG | 0.409121 | 8_2:-21104824 | None:intergenic |
| TGATAAGTCTCCGGTGGAAC+TGG | 0.414658 | 8_2:-21104743 | None:intergenic |
| GGTGAAAAGAACCTCACGTT+TGG | 0.421128 | 8_2:-21110529 | None:intergenic |
| ATAAATCATTACTCCTTTGA+CGG | 0.421794 | 8_2:-21104844 | None:intergenic |
| ATTATACAAATTTAAGAAGA+AGG | 0.426703 | 8_2:-21109979 | None:intergenic |
| CAAAGTCCAAAGTGAAATAA+CGG | 0.439885 | 8_2:-21110487 | None:intergenic |
| GGTTCCGTGCCGTTAGCTTC+GGG | 0.441529 | 8_2:-21104539 | None:intergenic |
| TCAATAGTGGCGAGAGAGTA+AGG | 0.443251 | 8_2:-21110101 | None:intergenic |
| GTGGAACTGGCGTTGGGAGA+AGG | 0.445193 | 8_2:-21104730 | None:intergenic |
| CACCGGAGATAAGCGGTTAG+AGG | 0.452032 | 8_2:+21110181 | Msa1239400:CDS |
| CTCGCTGCAGATCCTGAGTC+AGG | 0.452694 | 8_2:-21109920 | None:intergenic |
| TAACGATGCGCCGGTGCCGC+CGG | 0.461075 | 8_2:+21105270 | Msa1239400:CDS |
| GCGCCGGTGCCGCCGGTGTA+CGG | 0.469449 | 8_2:+21105277 | Msa1239400:CDS |
| GATTTCCTGTATTTAATTGG+AGG | 0.474346 | 8_2:+21110074 | Msa1239400:CDS |
| GATGTCCTCCAATTAAATAC+AGG | 0.474864 | 8_2:-21110079 | None:intergenic |
| GTTGACGGAGATGGTGGTGG+AGG | 0.475112 | 8_2:+21105237 | Msa1239400:CDS |
| GAAACAGCGGCGAATTTGAT+CGG | 0.478247 | 8_2:+21105212 | Msa1239400:CDS |
| CAGCAGCTTTAATTTGTGAC+AGG | 0.479407 | 8_2:+21108674 | Msa1239400:CDS |
| GTGAAAAGAACCTCACGTTT+GGG | 0.479847 | 8_2:-21110528 | None:intergenic |
| CATGGTTCCGGTTCCGGCGA+CGG | 0.481138 | 8_2:-21104801 | None:intergenic |
| TCTCCGGTGGAACTGGCGTT+GGG | 0.485239 | 8_2:-21104736 | None:intergenic |
| AAGAGAAAGAAGTGCTTAAG+TGG | 0.485757 | 8_2:+21110767 | Msa1239400:CDS |
| ACTGTTTGTGTTGGTTTCTC+GGG | 0.486652 | 8_2:-21104560 | None:intergenic |
| CTTAAATTTGTATAATGCCA+TGG | 0.489722 | 8_2:+21109986 | Msa1239400:CDS |
| TTGAACCCGTTATTTCACTT+TGG | 0.491212 | 8_2:+21110481 | Msa1239400:CDS |
| TGGAACTGGCGTTGGGAGAA+GGG | 0.491747 | 8_2:-21104729 | None:intergenic |
| TGAAAATGATAGAATTGAAG+TGG | 0.491803 | 8_2:+21110597 | Msa1239400:CDS |
| CGGGTAAAACGAAATGAAGT+GGG | 0.492685 | 8_2:-21104604 | None:intergenic |
| TCTCCCAACGCCAGTTCCAC+CGG | 0.493660 | 8_2:+21104733 | Msa1239400:CDS |
| ACCTACGAAATTCTTCGCTT+CGG | 0.495158 | 8_2:-21108774 | None:intergenic |
| TAACCGTACACCGGCGGCAC+CGG | 0.496578 | 8_2:-21105280 | None:intergenic |
| GAGAATACCATTCTCAATAG+TGG | 0.497027 | 8_2:-21110114 | None:intergenic |
| CGTTGTTTGTAACGGTTTCG+TGG | 0.498993 | 8_2:-21104643 | None:intergenic |
| TGAAGTTGAACTGTTTGTGT+TGG | 0.499274 | 8_2:-21104569 | None:intergenic |
| GTCTCCGGTGGAACTGGCGT+TGG | 0.502680 | 8_2:-21104737 | None:intergenic |
| AAATCGGAAAAGAGTTATCC+AGG | 0.503742 | 8_2:+21108436 | Msa1239400:CDS |
| GAGGTTGACGGAGATGGTGG+TGG | 0.503921 | 8_2:+21105234 | Msa1239400:CDS |
| ATGATTATGTTGAAGATGAT+CGG | 0.504698 | 8_2:+21105302 | Msa1239400:CDS |
| AAAGAGCTACGTGAAAGAAC+GGG | 0.504941 | 8_2:+21105118 | Msa1239400:CDS |
| TGATCGGAGGTTGACGGAGA+TGG | 0.505866 | 8_2:+21105228 | Msa1239400:CDS |
| TACCTCTAACCGCTTATCTC+CGG | 0.506747 | 8_2:-21110183 | None:intergenic |
| TTGTTGGTTTGATAAGTCTC+CGG | 0.508769 | 8_2:-21104752 | None:intergenic |
| ATTCATGCTGTCATTAGCGT+CGG | 0.517667 | 8_2:+21110011 | Msa1239400:CDS |
| AAAGTCCAAAGTGAAATAAC+GGG | 0.519238 | 8_2:-21110486 | None:intergenic |
| GTCATTAAATTCTTGAGTAG+TGG | 0.520931 | 8_2:+21110885 | Msa1239400:exon |
| TACTTGAAACCTAATAAAGC+TGG | 0.523318 | 8_2:+21110799 | Msa1239400:CDS |
| ACTAATTTCGTTGTTTGTAA+CGG | 0.524468 | 8_2:-21104651 | None:intergenic |
| ATACAGGAAATCATTGAAGA+AGG | 0.525977 | 8_2:-21110063 | None:intergenic |
| AAGGGCTTCATTAAGGAATA+CGG | 0.526182 | 8_2:-21110155 | None:intergenic |
| CGCCGGAACCGGAACCATGC+CGG | 0.528914 | 8_2:+21104805 | Msa1239400:CDS |
| CTTCAAGTGCGCGCGTAATG+AGG | 0.530496 | 8_2:+21105453 | Msa1239400:CDS |
| AGAGTTGTAGATGAATTAAG+AGG | 0.530709 | 8_2:+21110556 | Msa1239400:CDS |
| TCGGGTAAAACGAAATGAAG+TGG | 0.535187 | 8_2:-21104605 | None:intergenic |
| AATTCATCTACAACTCTATG+AGG | 0.536046 | 8_2:-21110550 | None:intergenic |
| CGAATTTGATCGGAGGTTGA+CGG | 0.539430 | 8_2:+21105222 | Msa1239400:CDS |
| TTAATGAAGCCCTTTAGCAC+CGG | 0.540260 | 8_2:+21110164 | Msa1239400:CDS |
| GGGGATTGTTGGTTCAGGAT+CGG | 0.542408 | 8_2:+21105362 | Msa1239400:CDS |
| GTTTCGACAATCGATTGAAG+AGG | 0.545742 | 8_2:+21104895 | Msa1239400:CDS |
| GTCCAGAAGGTGTAATTGAT+CGG | 0.546203 | 8_2:+21110036 | Msa1239400:CDS |
| CCGACTAGCTTCTCCGTCGC+CGG | 0.552069 | 8_2:+21104788 | Msa1239400:CDS |
| GATGAAGATGAAGAGATGAA+AGG | 0.554935 | 8_2:+21104977 | Msa1239400:CDS |
| GATCGGACGGATGAGATGGT+TGG | 0.555673 | 8_2:+21105319 | Msa1239400:CDS |
| ACTTGAACATCCGCGCGAGA+TGG | 0.556169 | 8_2:-21110639 | None:intergenic |
| ATCTCGCGCGGATGTTCAAG+TGG | 0.561832 | 8_2:+21110641 | Msa1239400:CDS |
| TCTCTCGCCACTATTGAGAA+TGG | 0.562266 | 8_2:+21110107 | Msa1239400:CDS |
| GATGGACAGTTCTCTTCTCT+AGG | 0.564145 | 8_2:-21110621 | None:intergenic |
| TTCATGCTGTCATTAGCGTC+GGG | 0.564186 | 8_2:+21110012 | Msa1239400:CDS |
| TCGGCACGTTCATCCGTCAA+AGG | 0.565167 | 8_2:+21104831 | Msa1239400:CDS |
| GAAAGAGCTACGTGAAAGAA+CGG | 0.573200 | 8_2:+21105117 | Msa1239400:CDS |
| TTTCACTTTGGACTTTGTAA+CGG | 0.573444 | 8_2:+21110493 | Msa1239400:CDS |
| GGCGTTGGGAGAAGGGAATG+AGG | 0.573445 | 8_2:-21104722 | None:intergenic |
| TTCTCGTTGAAGAAAATCAT+CGG | 0.578954 | 8_2:-21105154 | None:intergenic |
| TTCAACGAGAAGCTTATAGG+AGG | 0.582390 | 8_2:+21105166 | Msa1239400:CDS |
| TTAGGTAGGAGTAGATTCTG+TGG | 0.587781 | 8_2:+21111045 | Msa1239400:three_prime_UTR |
| CAGGTATATAAACCTGACTC+AGG | 0.599154 | 8_2:+21109908 | Msa1239400:intron |
| ATTAGCGTCGGGAGTCCAGA+AGG | 0.599430 | 8_2:+21110023 | Msa1239400:CDS |
| TTGGTTTGATAAGTCTCCGG+TGG | 0.600131 | 8_2:-21104749 | None:intergenic |
| GAAGAATCACGTTCTTCTCG+AGG | 0.623420 | 8_2:+21104999 | Msa1239400:CDS |
| TTACCCGAAAATCACGCTAA+CGG | 0.625572 | 8_2:+21104620 | Msa1239400:CDS |
| CCGGCGACGGAGAAGCTAGT+CGG | 0.626290 | 8_2:-21104788 | None:intergenic |
| TCTTGAGTAGTGGCAGCCAA+AGG | 0.638308 | 8_2:+21110895 | Msa1239400:exon |
| TCGGAGGTTGACGGAGATGG+TGG | 0.642760 | 8_2:+21105231 | Msa1239400:CDS |
| TAATCATAACCGTACACCGG+CGG | 0.643157 | 8_2:-21105286 | None:intergenic |
| CCTTTAGCACCGGAGATAAG+CGG | 0.643608 | 8_2:+21110174 | Msa1239400:CDS |
| GAACGTGCCGAAATCCGGCA+TGG | 0.647367 | 8_2:-21104819 | None:intergenic |
| AGATGATCGGACGGATGAGA+TGG | 0.650204 | 8_2:+21105315 | Msa1239400:CDS |
| GCCGAAGCGAAGAATTTCGT+AGG | 0.664023 | 8_2:+21108773 | Msa1239400:CDS |
| TCTTTCAGGTCTCAGCGTCG+TGG | 0.666569 | 8_2:+21104937 | Msa1239400:CDS |
| GTATTCTCAGATGTAATCAG+AGG | 0.669506 | 8_2:+21110129 | Msa1239400:CDS |
| AATGACAGCATGAATGACCA+TGG | 0.669797 | 8_2:-21110003 | None:intergenic |
| TTATGTTGAAGATGATCGGA+CGG | 0.673531 | 8_2:+21105306 | Msa1239400:CDS |
| AGAGAACTGTCCATCTCGCG+CGG | 0.673938 | 8_2:+21110629 | Msa1239400:CDS |
| GCTACGTGAAAGAACGGGAA+CGG | 0.678402 | 8_2:+21105123 | Msa1239400:CDS |
| CAAAATCTAGCCCAAACGTG+AGG | 0.679970 | 8_2:+21110518 | Msa1239400:CDS |
| AGAAGCATAAGACTCAAGCA+TGG | 0.681923 | 8_2:-21108716 | None:intergenic |
| ACAGCGGCGAATTTGATCGG+AGG | 0.683538 | 8_2:+21105215 | Msa1239400:CDS |
| AACGAAATTAGTTATGAACA+AGG | 0.684970 | 8_2:+21104662 | Msa1239400:CDS |
| GGGTCCCGAAGCTAACGGCA+CGG | 0.693360 | 8_2:+21104535 | Msa1239400:CDS |
| TTGAATTCGTTACGAAACAG+CGG | 0.707942 | 8_2:+21105199 | Msa1239400:CDS |
| ACATAATCATAACCGTACAC+CGG | 0.710456 | 8_2:-21105289 | None:intergenic |
| GTAATGGGTCCCGAAGCTAA+CGG | 0.723744 | 8_2:+21104530 | None:intergenic |
| GAAATTAGTTATGAACAAGG+AGG | 0.751176 | 8_2:+21104665 | Msa1239400:CDS |
| ATGGTGGTGGAGGAATACGC+CGG | 0.754280 | 8_2:+21105247 | Msa1239400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATGTTTTCAAATATAAAA+CGG | + | chr8_2:21107895-21107914 | Msa1239400:intron | 10.0% |
| !! | ATATTATATATAAGCTATAT+TGG | - | chr8_2:21110228-21110247 | None:intergenic | 10.0% |
| !! | AAAAATATATTTCATAAGAA+AGG | - | chr8_2:21110723-21110742 | None:intergenic | 10.0% |
| !!! | AGTTTTTCAAAAAAAAAAAA+AGG | + | chr8_2:21111017-21111036 | Msa1239400:three_prime_UTR | 10.0% |
| !!! | AAAAAAAAAAAGGTATTTTT+AGG | + | chr8_2:21111027-21111046 | Msa1239400:three_prime_UTR | 10.0% |
| !!! | CAATTTTATATGAAAAGATA+TGG | + | chr8_2:21107516-21107535 | Msa1239400:intron | 15.0% |
| !!! | AGAATAAAAAACAATTTTGA+GGG | + | chr8_2:21108130-21108149 | Msa1239400:intron | 15.0% |
| !! | AATGCAAATAATTATTATAG+TGG | - | chr8_2:21108392-21108411 | None:intergenic | 15.0% |
| !!! | TACATTTAATTCTTTTATTG+TGG | + | chr8_2:21108819-21108838 | Msa1239400:intron | 15.0% |
| !!! | TATAACATAGTTTTAACATT+AGG | - | chr8_2:21108916-21108935 | None:intergenic | 15.0% |
| !! | ATTATACAAATTTAAGAAGA+AGG | - | chr8_2:21109982-21110001 | None:intergenic | 15.0% |
| !!! | TTATATGAATTATCTGTTTT+GGG | - | chr8_2:21110942-21110961 | None:intergenic | 15.0% |
| !!! | TTTATATGAATTATCTGTTT+TGG | - | chr8_2:21110943-21110962 | None:intergenic | 15.0% |
| !! | ACAGAAATACGTAAATTATA+CGG | - | chr8_2:21105493-21105512 | None:intergenic | 20.0% |
| !!! | TTTTAATCGTATTTGTTTGT+TGG | + | chr8_2:21105515-21105534 | Msa1239400:intron | 20.0% |
| !! | TCAAAAGAAATACAAGTATA+CGG | - | chr8_2:21105558-21105577 | None:intergenic | 20.0% |
| !! | ATAAGCACTTATTATGATAA+GGG | - | chr8_2:21105745-21105764 | None:intergenic | 20.0% |
| !! | TATAAGCACTTATTATGATA+AGG | - | chr8_2:21105746-21105765 | None:intergenic | 20.0% |
| !! | ATCACAATTGTTTATGAAAA+AGG | + | chr8_2:21106276-21106295 | Msa1239400:intron | 20.0% |
| !! | AATTGTTTATGAAAAAGGAA+GGG | + | chr8_2:21106281-21106300 | Msa1239400:intron | 20.0% |
| !!! | AAGTAAAACATTTTTTTTGC+TGG | + | chr8_2:21106376-21106395 | Msa1239400:intron | 20.0% |
| !! | AATTCACAAATCATATTTGT+GGG | - | chr8_2:21107100-21107119 | None:intergenic | 20.0% |
| !! | TAATTCACAAATCATATTTG+TGG | - | chr8_2:21107101-21107120 | None:intergenic | 20.0% |
| !! | TGGATAAACAGATTATAAAA+AGG | + | chr8_2:21107210-21107229 | Msa1239400:intron | 20.0% |
| !! | AAGGAAATTATTACCATAAA+AGG | - | chr8_2:21107300-21107319 | None:intergenic | 20.0% |
| !! | TTAACATATGCGTATTATAT+TGG | + | chr8_2:21107326-21107345 | Msa1239400:intron | 20.0% |
| !! | CTTTCTTAAACAATGTATTT+AGG | - | chr8_2:21107409-21107428 | None:intergenic | 20.0% |
| !!! | AAAATTTTAAGTCAAGTAGA+AGG | + | chr8_2:21107451-21107470 | Msa1239400:intron | 20.0% |
| !!! | ATAACTTCTAAAAAAGGATT+GGG | - | chr8_2:21107681-21107700 | None:intergenic | 20.0% |
| !!! | AATAACTTCTAAAAAAGGAT+TGG | - | chr8_2:21107682-21107701 | None:intergenic | 20.0% |
| !!! | TGACAAATAACTTCTAAAAA+AGG | - | chr8_2:21107687-21107706 | None:intergenic | 20.0% |
| !! | GAAAGATAATTGAAAATATG+TGG | + | chr8_2:21108085-21108104 | Msa1239400:intron | 20.0% |
| !!! | GAGAATAAAAAACAATTTTG+AGG | + | chr8_2:21108129-21108148 | Msa1239400:intron | 20.0% |
| !! | ATATTCACATTTGATTCAAA+GGG | - | chr8_2:21108313-21108332 | None:intergenic | 20.0% |
| !! | TGGATCATATAAAATAGTAT+TGG | + | chr8_2:21108874-21108893 | Msa1239400:intron | 20.0% |
| !! | GGATCATATAAAATAGTATT+GGG | + | chr8_2:21108875-21108894 | Msa1239400:intron | 20.0% |
| !!! | ATTGTTTTCATTAGTTATCT+AGG | + | chr8_2:21109136-21109155 | Msa1239400:intron | 20.0% |
| !!! | TTTTAGCATCATATTTATGT+GGG | + | chr8_2:21109278-21109297 | Msa1239400:intron | 20.0% |
| !! | TTTCATAACAAAATAGTTCT+TGG | + | chr8_2:21109520-21109539 | Msa1239400:intron | 20.0% |
| !! | AATGATTTCCTGTATTTAAT+TGG | + | chr8_2:21110071-21110090 | Msa1239400:CDS | 20.0% |
| !! | AACATGTAAATGATTGATTA+TGG | + | chr8_2:21110411-21110430 | Msa1239400:intron | 20.0% |
| !!! | CTTATGAAATATATTTTTGC+AGG | + | chr8_2:21110725-21110744 | Msa1239400:intron | 20.0% |
| !!! | AAAAAAAGGTATTTTTAGGT+AGG | + | chr8_2:21111031-21111050 | Msa1239400:three_prime_UTR | 20.0% |
| !!! | AAATGAAGTGGGTTATTTAT+GGG | - | chr8_2:21104596-21104615 | None:intergenic | 25.0% |
| ! | ACTAATTTCGTTGTTTGTAA+CGG | - | chr8_2:21104654-21104673 | None:intergenic | 25.0% |
| ! | AACGAAATTAGTTATGAACA+AGG | + | chr8_2:21104662-21104681 | Msa1239400:CDS | 25.0% |
| ! | ATAAATCATTACTCCTTTGA+CGG | - | chr8_2:21104847-21104866 | None:intergenic | 25.0% |
| ! | ATGATTATGTTGAAGATGAT+CGG | + | chr8_2:21105302-21105321 | Msa1239400:CDS | 25.0% |
| !!! | ATCGTTAAGAATTGTTTTGA+AGG | + | chr8_2:21105400-21105419 | Msa1239400:CDS | 25.0% |
| !!! | TCGTTAAGAATTGTTTTGAA+GGG | + | chr8_2:21105401-21105420 | Msa1239400:CDS | 25.0% |
| ! | AATACGTCTTTGTCTAAATT+CGG | - | chr8_2:21105636-21105655 | None:intergenic | 25.0% |
| !!! | TAAATGTTGGTTTAGCTAAA+TGG | - | chr8_2:21105672-21105691 | None:intergenic | 25.0% |
| ! | ATTTAGCTAAACCAACATTT+AGG | + | chr8_2:21105671-21105690 | Msa1239400:intron | 25.0% |
| ! | AATCGTACAATGTTGAATTA+TGG | + | chr8_2:21105843-21105862 | Msa1239400:intron | 25.0% |
| !!! | AGAATGAAAATGTTTTTGCA+TGG | + | chr8_2:21106068-21106087 | Msa1239400:intron | 25.0% |
| ! | CAATTGTTTATGAAAAAGGA+AGG | + | chr8_2:21106280-21106299 | Msa1239400:intron | 25.0% |
| ! | ATTGTTTATGAAAAAGGAAG+GGG | + | chr8_2:21106282-21106301 | Msa1239400:intron | 25.0% |
| ! | TTCATTGTATACAATCCTTT+GGG | - | chr8_2:21106426-21106445 | None:intergenic | 25.0% |
| ! | TATACAATGAACATTATGTG+TGG | + | chr8_2:21106435-21106454 | Msa1239400:intron | 25.0% |
| ! | TATTGTCACAAATTCGAAAT+TGG | + | chr8_2:21106614-21106633 | Msa1239400:intron | 25.0% |
| ! | GAGTAACAAAACAATATTGA+AGG | + | chr8_2:21107006-21107025 | Msa1239400:intron | 25.0% |
| ! | TAACAAAACAATATTGAAGG+TGG | + | chr8_2:21107009-21107028 | Msa1239400:intron | 25.0% |
| ! | AATTAAATTGATGTAGCAGA+TGG | + | chr8_2:21107165-21107184 | Msa1239400:intron | 25.0% |
| ! | CAGATGGATAACTAAATAAA+GGG | + | chr8_2:21107181-21107200 | Msa1239400:intron | 25.0% |
| !! | TCAAAAACAGTTTCCTTTTA+TGG | + | chr8_2:21107284-21107303 | Msa1239400:intron | 25.0% |
| ! | ACGCATATGTTAAACATAAA+AGG | - | chr8_2:21107319-21107338 | None:intergenic | 25.0% |
| ! | TTTCAAGGGAAAATGATATT+AGG | - | chr8_2:21107568-21107587 | None:intergenic | 25.0% |
| !!! | GACATTAGCATTTTTTTCAA+GGG | - | chr8_2:21107582-21107601 | None:intergenic | 25.0% |
| !!! | TGACATTAGCATTTTTTTCA+AGG | - | chr8_2:21107583-21107602 | None:intergenic | 25.0% |
| !! | CAAATTTACTTCTCTAAGAA+AGG | - | chr8_2:21107714-21107733 | None:intergenic | 25.0% |
| !! | TTTGATTTCTTGTCATAATG+CGG | - | chr8_2:21107993-21108012 | None:intergenic | 25.0% |
| ! | ACAAGAAATCAAAAACACAT+TGG | + | chr8_2:21108000-21108019 | Msa1239400:intron | 25.0% |
| ! | ATCTATTGTCTAATCTATTG+TGG | + | chr8_2:21108167-21108186 | Msa1239400:intron | 25.0% |
| ! | GAAAGAATACTGAAAATTTG+CGG | + | chr8_2:21108197-21108216 | Msa1239400:intron | 25.0% |
| ! | AATCATCTATTTCAACATGA+AGG | + | chr8_2:21108221-21108240 | Msa1239400:intron | 25.0% |
| ! | CATATTCACATTTGATTCAA+AGG | - | chr8_2:21108314-21108333 | None:intergenic | 25.0% |
| ! | TGATTTATTGATCCAAAGAT+AGG | + | chr8_2:21108344-21108363 | Msa1239400:intron | 25.0% |
| !! | TTAAAGCATTTGTGGATAAA+GGG | - | chr8_2:21108619-21108638 | None:intergenic | 25.0% |
| !! | ATTAAAGCATTTGTGGATAA+AGG | - | chr8_2:21108620-21108639 | None:intergenic | 25.0% |
| ! | CACTAACTAACATAACAAAA+AGG | - | chr8_2:21108949-21108968 | None:intergenic | 25.0% |
| ! | ACTATCAAGATAACTACTAA+CGG | - | chr8_2:21108983-21109002 | None:intergenic | 25.0% |
| ! | TTAAACTGTTTATCCAAACT+AGG | - | chr8_2:21109020-21109039 | None:intergenic | 25.0% |
| !!! | GTTTTAGCATCATATTTATG+TGG | + | chr8_2:21109277-21109296 | Msa1239400:intron | 25.0% |
| ! | AGCCTTTGTATTATACATTA+CGG | + | chr8_2:21109693-21109712 | Msa1239400:intron | 25.0% |
| ! | TGATATTAAAGACAAAAGCT+AGG | - | chr8_2:21109833-21109852 | None:intergenic | 25.0% |
| ! | CTTAAATTTGTATAATGCCA+TGG | + | chr8_2:21109986-21110005 | Msa1239400:CDS | 25.0% |
| ! | TGAAAATGATAGAATTGAAG+TGG | + | chr8_2:21110597-21110616 | Msa1239400:CDS | 25.0% |
| ! | TTCTGGTAAGATATATTAAC+AGG | - | chr8_2:21110856-21110875 | None:intergenic | 25.0% |
| !!! | TATCTTACCAGAATTTTGAT+TGG | + | chr8_2:21110863-21110882 | Msa1239400:CDS | 25.0% |
| ! | TTAATGACCAATCAAAATTC+TGG | - | chr8_2:21110873-21110892 | None:intergenic | 25.0% |
| !! | GAAATGAAGTGGGTTATTTA+TGG | - | chr8_2:21104597-21104616 | None:intergenic | 30.0% |
| GAAATTAGTTATGAACAAGG+AGG | + | chr8_2:21104665-21104684 | Msa1239400:CDS | 30.0% | |
| ! | TTTGAAGAATTTTCTCACTG+CGG | - | chr8_2:21105044-21105063 | None:intergenic | 30.0% |
| TTCTCGTTGAAGAAAATCAT+CGG | - | chr8_2:21105157-21105176 | None:intergenic | 30.0% | |
| AAAGAAATACAAGTATACGG+TGG | - | chr8_2:21105555-21105574 | None:intergenic | 30.0% | |
| !! | TTTAGCTAAATGGAGTATTG+AGG | - | chr8_2:21105662-21105681 | None:intergenic | 30.0% |
| ! | CGATGACTAGTTCTTAAAAA+TGG | - | chr8_2:21105936-21105955 | None:intergenic | 30.0% |
| ACGAGACGTAGAAATATTAA+TGG | + | chr8_2:21105967-21105986 | Msa1239400:intron | 30.0% | |
| AATATACCTTTCAATACACG+AGG | - | chr8_2:21106165-21106184 | None:intergenic | 30.0% | |
| ! | TAAACAATTGTGATTTGTCG+TGG | - | chr8_2:21106270-21106289 | None:intergenic | 30.0% |
| TCATTGTATACAATCCTTTG+GGG | - | chr8_2:21106425-21106444 | None:intergenic | 30.0% | |
| GTTCATTGTATACAATCCTT+TGG | - | chr8_2:21106427-21106446 | None:intergenic | 30.0% | |
| TTAAATTGATACCATATGCG+TGG | + | chr8_2:21106656-21106675 | Msa1239400:intron | 30.0% | |
| GCAGATGGATAACTAAATAA+AGG | + | chr8_2:21107180-21107199 | Msa1239400:intron | 30.0% | |
| AACTAAATAAAGGGAAATGC+TGG | + | chr8_2:21107190-21107209 | Msa1239400:intron | 30.0% | |
| TACTTTCCTGTATGAAATAG+GGG | - | chr8_2:21107865-21107884 | None:intergenic | 30.0% | |
| CTACTTTCCTGTATGAAATA+GGG | - | chr8_2:21107866-21107885 | None:intergenic | 30.0% | |
| ACTACTTTCCTGTATGAAAT+AGG | - | chr8_2:21107867-21107886 | None:intergenic | 30.0% | |
| AAAAACACATTGGACAAAGA+CGG | + | chr8_2:21108010-21108029 | Msa1239400:intron | 30.0% | |
| !! | AACAATTTTGAGGGAGATTT+TGG | + | chr8_2:21108139-21108158 | Msa1239400:intron | 30.0% |
| GCATTTGTGAACAATTTCTT+AGG | + | chr8_2:21108407-21108426 | Msa1239400:intron | 30.0% | |
| ATTTCTTAGGCTGTTGAAAT+CGG | + | chr8_2:21108420-21108439 | Msa1239400:intron | 30.0% | |
| ! | ACTTCATCCATCATGTTTTT+GGG | + | chr8_2:21108463-21108482 | Msa1239400:CDS | 30.0% |
| TTTCTTACCCAAAAACATGA+TGG | - | chr8_2:21108473-21108492 | None:intergenic | 30.0% | |
| ACAGAAAAAAGTTGCCAATA+AGG | - | chr8_2:21108542-21108561 | None:intergenic | 30.0% | |
| !!! | TATTGGCAACTTTTTTCTGT+AGG | + | chr8_2:21108542-21108561 | Msa1239400:intron | 30.0% |
| !!! | ATTGGCAACTTTTTTCTGTA+GGG | + | chr8_2:21108543-21108562 | Msa1239400:intron | 30.0% |
| !! | AGGGAAAATGATTTTGAAGA+TGG | + | chr8_2:21108562-21108581 | Msa1239400:intron | 30.0% |
| !! | CACAAATGCTTTAATTTTCG+CGG | + | chr8_2:21108625-21108644 | Msa1239400:CDS | 30.0% |
| ! | CTTTGGTTCATTGTCATTTA+CGG | - | chr8_2:21108653-21108672 | None:intergenic | 30.0% |
| ! | CTATTTTATATGATCCACAC+TGG | - | chr8_2:21108871-21108890 | None:intergenic | 30.0% |
| GCTTATTCGAACATATCTAT+TGG | - | chr8_2:21109232-21109251 | None:intergenic | 30.0% | |
| GATGCTAAAACTAAGACATA+GGG | - | chr8_2:21109268-21109287 | None:intergenic | 30.0% | |
| TGATGCTAAAACTAAGACAT+AGG | - | chr8_2:21109269-21109288 | None:intergenic | 30.0% | |
| GACTAAGTAAGAAAATGAGA+AGG | - | chr8_2:21109449-21109468 | None:intergenic | 30.0% | |
| ATAATGTACAGTCAATGGTA+AGG | + | chr8_2:21109566-21109585 | Msa1239400:intron | 30.0% | |
| GACCGTAATGTATAATACAA+AGG | - | chr8_2:21109698-21109717 | None:intergenic | 30.0% | |
| ! | TTATACATTACGGTCCATTT+TGG | + | chr8_2:21109703-21109722 | Msa1239400:intron | 30.0% |
| TGATGGAAAACATCGAAAAA+TGG | - | chr8_2:21109771-21109790 | None:intergenic | 30.0% | |
| CCTGCAATTAGAAAGAAAAA+TGG | - | chr8_2:21109892-21109911 | None:intergenic | 30.0% | |
| !! | CCATTTTTCTTTCTAATTGC+AGG | + | chr8_2:21109889-21109908 | Msa1239400:intron | 30.0% |
| ATACAGGAAATCATTGAAGA+AGG | - | chr8_2:21110066-21110085 | None:intergenic | 30.0% | |
| GATTTCCTGTATTTAATTGG+AGG | + | chr8_2:21110074-21110093 | Msa1239400:CDS | 30.0% | |
| AAAGTCCAAAGTGAAATAAC+GGG | - | chr8_2:21110489-21110508 | None:intergenic | 30.0% | |
| CAAAGTCCAAAGTGAAATAA+CGG | - | chr8_2:21110490-21110509 | None:intergenic | 30.0% | |
| TTTCACTTTGGACTTTGTAA+CGG | + | chr8_2:21110493-21110512 | Msa1239400:CDS | 30.0% | |
| AATTCATCTACAACTCTATG+AGG | - | chr8_2:21110553-21110572 | None:intergenic | 30.0% | |
| AGAGTTGTAGATGAATTAAG+AGG | + | chr8_2:21110556-21110575 | Msa1239400:CDS | 30.0% | |
| !!! | TTCTAGCTTTTCTTAAGCTT+TGG | + | chr8_2:21110671-21110690 | Msa1239400:intron | 30.0% |
| !! | ATATATTTTTGCAGGTTCAG+TGG | + | chr8_2:21110733-21110752 | Msa1239400:intron | 30.0% |
| TACTTGAAACCTAATAAAGC+TGG | + | chr8_2:21110799-21110818 | Msa1239400:CDS | 30.0% | |
| GTCATTAAATTCTTGAGTAG+TGG | + | chr8_2:21110885-21110904 | Msa1239400:exon | 30.0% | |
| ATCACTCAAATTCTTTCCTT+TGG | - | chr8_2:21110914-21110933 | None:intergenic | 30.0% | |
| !! | AACTGTTTGTGTTGGTTTCT+CGG | - | chr8_2:21104564-21104583 | None:intergenic | 35.0% |
| TGAAGTTGAACTGTTTGTGT+TGG | - | chr8_2:21104572-21104591 | None:intergenic | 35.0% | |
| GTGTAGATAGCAAAAACGAA+GGG | + | chr8_2:21104687-21104706 | Msa1239400:CDS | 35.0% | |
| !! | TTGTTGGTTTGATAAGTCTC+CGG | - | chr8_2:21104755-21104774 | None:intergenic | 35.0% |
| ATCTCTTCATCTTCATCTTC+AGG | - | chr8_2:21104974-21104993 | None:intergenic | 35.0% | |
| GATGAAGATGAAGAGATGAA+AGG | + | chr8_2:21104977-21104996 | Msa1239400:CDS | 35.0% | |
| TTCTTCAACGAGAAGCTTAT+AGG | + | chr8_2:21105163-21105182 | Msa1239400:CDS | 35.0% | |
| TTGAATTCGTTACGAAACAG+CGG | + | chr8_2:21105199-21105218 | Msa1239400:CDS | 35.0% | |
| ACATAATCATAACCGTACAC+CGG | - | chr8_2:21105292-21105311 | None:intergenic | 35.0% | |
| TTATGTTGAAGATGATCGGA+CGG | + | chr8_2:21105306-21105325 | Msa1239400:CDS | 35.0% | |
| ! | TTGGAGTTGTTAGGGTTTTA+AGG | + | chr8_2:21105338-21105357 | Msa1239400:CDS | 35.0% |
| !! | TGGAGTTGTTAGGGTTTTAA+GGG | + | chr8_2:21105339-21105358 | Msa1239400:CDS | 35.0% |
| AACCAACATTTAGGCAAGTT+TGG | + | chr8_2:21105680-21105699 | Msa1239400:intron | 35.0% | |
| GTTGAATTATGGTTGCTTGA+TGG | + | chr8_2:21105854-21105873 | Msa1239400:intron | 35.0% | |
| ! | TTTTTGCATGGAGAAGCTTT+TGG | + | chr8_2:21106080-21106099 | Msa1239400:intron | 35.0% |
| TTCAAGTACTCGAACTTGAA+TGG | + | chr8_2:21106211-21106230 | Msa1239400:intron | 35.0% | |
| TCAAGTACTCGAACTTGAAT+GGG | + | chr8_2:21106212-21106231 | Msa1239400:intron | 35.0% | |
| TTTATGAAAAAGGAAGGGGT+TGG | + | chr8_2:21106286-21106305 | Msa1239400:intron | 35.0% | |
| TTATGAAAAAGGAAGGGGTT+GGG | + | chr8_2:21106287-21106306 | Msa1239400:intron | 35.0% | |
| TATCTAACTTCTATCCCCAA+AGG | + | chr8_2:21106408-21106427 | Msa1239400:intron | 35.0% | |
| AACATTATGTGTGGAGAAGT+GGG | + | chr8_2:21106444-21106463 | Msa1239400:intron | 35.0% | |
| CTACCAACTAGCTACATTTA+GGG | + | chr8_2:21106513-21106532 | Msa1239400:intron | 35.0% | |
| TACCAACTAGCTACATTTAG+GGG | + | chr8_2:21106514-21106533 | Msa1239400:intron | 35.0% | |
| ! | ATGAGATTTTTCCACGCATA+TGG | - | chr8_2:21106670-21106689 | None:intergenic | 35.0% |
| ACGTATCACCAATTAGTTGT+GGG | - | chr8_2:21106833-21106852 | None:intergenic | 35.0% | |
| ! | AACTAATTGGTGATACGTGA+GGG | + | chr8_2:21106835-21106854 | Msa1239400:intron | 35.0% |
| ! | TTCTTTTACAGCCACAACTT+TGG | + | chr8_2:21106916-21106935 | Msa1239400:intron | 35.0% |
| ! | ACAACTTTGGTGATACTTGA+GGG | + | chr8_2:21106929-21106948 | Msa1239400:intron | 35.0% |
| ATTCTACCCCTATTTCATAC+AGG | + | chr8_2:21107856-21107875 | Msa1239400:intron | 35.0% | |
| AAATCGGAAAAGAGTTATCC+AGG | + | chr8_2:21108436-21108455 | Msa1239400:CDS | 35.0% | |
| ! | CACTTCATCCATCATGTTTT+TGG | + | chr8_2:21108462-21108481 | Msa1239400:CDS | 35.0% |
| ! | CGCGAAAATTAAAGCATTTG+TGG | - | chr8_2:21108627-21108646 | None:intergenic | 35.0% |
| CAAATTAAAGCTGCTGTCTT+TGG | - | chr8_2:21108670-21108689 | None:intergenic | 35.0% | |
| AGAAATGTATAGAACCAGTG+TGG | + | chr8_2:21108854-21108873 | Msa1239400:intron | 35.0% | |
| TTTGCTTAGAAAGCCTAGTT+TGG | + | chr8_2:21109004-21109023 | Msa1239400:intron | 35.0% | |
| ACTAAGACATAGGGCTTATT+TGG | - | chr8_2:21109259-21109278 | None:intergenic | 35.0% | |
| AAGGAACACACAGATTATCA+AGG | - | chr8_2:21109430-21109449 | None:intergenic | 35.0% | |
| CTACGATAATGTACAGTCAA+TGG | + | chr8_2:21109561-21109580 | Msa1239400:intron | 35.0% | |
| AAAAGCTAGGAAACTAGAGA+TGG | - | chr8_2:21109820-21109839 | None:intergenic | 35.0% | |
| GATGTCCTCCAATTAAATAC+AGG | - | chr8_2:21110082-21110101 | None:intergenic | 35.0% | |
| GAGAATACCATTCTCAATAG+TGG | - | chr8_2:21110117-21110136 | None:intergenic | 35.0% | |
| GTATTCTCAGATGTAATCAG+AGG | + | chr8_2:21110129-21110148 | Msa1239400:CDS | 35.0% | |
| AAGGGCTTCATTAAGGAATA+CGG | - | chr8_2:21110158-21110177 | None:intergenic | 35.0% | |
| AACCTGCAGTTTGTAAGAAA+CGG | - | chr8_2:21110449-21110468 | None:intergenic | 35.0% | |
| ! | TTGAACCCGTTATTTCACTT+TGG | + | chr8_2:21110481-21110500 | Msa1239400:CDS | 35.0% |
| !! | AAGAGAAAGAAGTGCTTAAG+TGG | + | chr8_2:21110767-21110786 | Msa1239400:CDS | 35.0% |
| ACACATCTCTTGAGTGATAA+TGG | + | chr8_2:21110829-21110848 | Msa1239400:CDS | 35.0% | |
| !! | ACTGTTTGTGTTGGTTTCTC+GGG | - | chr8_2:21104563-21104582 | None:intergenic | 40.0% |
| CGGGTAAAACGAAATGAAGT+GGG | - | chr8_2:21104607-21104626 | None:intergenic | 40.0% | |
| TCGGGTAAAACGAAATGAAG+TGG | - | chr8_2:21104608-21104627 | None:intergenic | 40.0% | |
| TTACCCGAAAATCACGCTAA+CGG | + | chr8_2:21104620-21104639 | Msa1239400:CDS | 40.0% | |
| GGTGTAGATAGCAAAAACGA+AGG | + | chr8_2:21104686-21104705 | Msa1239400:CDS | 40.0% | |
| !!! | CGGAGTTTCGTTGTTTTTGT+TGG | - | chr8_2:21104771-21104790 | None:intergenic | 40.0% |
| GTTTCGACAATCGATTGAAG+AGG | + | chr8_2:21104895-21104914 | Msa1239400:CDS | 40.0% | |
| GTGACAGAGTTCAATCTTTC+AGG | + | chr8_2:21104923-21104942 | Msa1239400:CDS | 40.0% | |
| GAAAGAGCTACGTGAAAGAA+CGG | + | chr8_2:21105117-21105136 | Msa1239400:CDS | 40.0% | |
| AAAGAGCTACGTGAAAGAAC+GGG | + | chr8_2:21105118-21105137 | Msa1239400:CDS | 40.0% | |
| TTCAACGAGAAGCTTATAGG+AGG | + | chr8_2:21105166-21105185 | Msa1239400:CDS | 40.0% | |
| ATGAGATGGTTGGAGTTGTT+AGG | + | chr8_2:21105329-21105348 | Msa1239400:CDS | 40.0% | |
| TGAGATGGTTGGAGTTGTTA+GGG | + | chr8_2:21105330-21105349 | Msa1239400:CDS | 40.0% | |
| !!! | GGAGTTGTTAGGGTTTTAAG+GGG | + | chr8_2:21105340-21105359 | Msa1239400:CDS | 40.0% |
| !!! | GAGTTGTTAGGGTTTTAAGG+GGG | + | chr8_2:21105341-21105360 | Msa1239400:CDS | 40.0% |
| !!! | AGTTGTTAGGGTTTTAAGGG+GGG | + | chr8_2:21105342-21105361 | Msa1239400:CDS | 40.0% |
| CTCCAAACTTGCCTAAATGT+TGG | - | chr8_2:21105685-21105704 | None:intergenic | 40.0% | |
| !! | ATGGCTTGTAGTTGATGAGA+AGG | + | chr8_2:21105986-21106005 | Msa1239400:intron | 40.0% |
| AACTTGAATGGGATTGTGTC+TGG | + | chr8_2:21106223-21106242 | Msa1239400:intron | 40.0% | |
| GAACATTATGTGTGGAGAAG+TGG | + | chr8_2:21106443-21106462 | Msa1239400:intron | 40.0% | |
| ACATTATGTGTGGAGAAGTG+GGG | + | chr8_2:21106445-21106464 | Msa1239400:intron | 40.0% | |
| ! | GAGATAATTTGTGCAAGAGC+CGG | - | chr8_2:21106488-21106507 | None:intergenic | 40.0% |
| GCTACCAACTAGCTACATTT+AGG | + | chr8_2:21106512-21106531 | Msa1239400:intron | 40.0% | |
| ATCCCCTAAATGTAGCTAGT+TGG | - | chr8_2:21106519-21106538 | None:intergenic | 40.0% | |
| GTATCACCAATTAGTTGTGG+GGG | - | chr8_2:21106831-21106850 | None:intergenic | 40.0% | |
| CGTATCACCAATTAGTTGTG+GGG | - | chr8_2:21106832-21106851 | None:intergenic | 40.0% | |
| CACGTATCACCAATTAGTTG+TGG | - | chr8_2:21106834-21106853 | None:intergenic | 40.0% | |
| ! | CAACTAATTGGTGATACGTG+AGG | + | chr8_2:21106834-21106853 | Msa1239400:intron | 40.0% |
| ! | ACTAATTGGTGATACGTGAG+GGG | + | chr8_2:21106836-21106855 | Msa1239400:intron | 40.0% |
| CTCAAGTATCACCAAAGTTG+TGG | - | chr8_2:21106930-21106949 | None:intergenic | 40.0% | |
| ! | CACAACTTTGGTGATACTTG+AGG | + | chr8_2:21106928-21106947 | Msa1239400:intron | 40.0% |
| ! | CAACTTTGGTGATACTTGAG+GGG | + | chr8_2:21106930-21106949 | Msa1239400:intron | 40.0% |
| TGTCACAATCTTGTCATGCT+TGG | + | chr8_2:21107732-21107751 | Msa1239400:intron | 40.0% | |
| ATCTACAGACGCAATCTAAG+TGG | - | chr8_2:21107777-21107796 | None:intergenic | 40.0% | |
| !! | CAGCAGCTTTAATTTGTGAC+AGG | + | chr8_2:21108674-21108693 | Msa1239400:CDS | 40.0% |
| ! | AGAAGCATAAGACTCAAGCA+TGG | - | chr8_2:21108719-21108738 | None:intergenic | 40.0% |
| AAATTCTTCGCTTCGGCTAA+TGG | - | chr8_2:21108770-21108789 | None:intergenic | 40.0% | |
| ACCTACGAAATTCTTCGCTT+CGG | - | chr8_2:21108777-21108796 | None:intergenic | 40.0% | |
| ! | ATGTGGGAGCATAAGAATTG+TGG | + | chr8_2:21109294-21109313 | Msa1239400:intron | 40.0% |
| ! | TGTGGGAGCATAAGAATTGT+GGG | + | chr8_2:21109295-21109314 | Msa1239400:intron | 40.0% |
| TAGAGAGAGCAAATGCTCTA+AGG | + | chr8_2:21109347-21109366 | Msa1239400:intron | 40.0% | |
| !! | GAGTCATGTTGACTCCAAAA+TGG | - | chr8_2:21109720-21109739 | None:intergenic | 40.0% |
| ! | TCGATGTTTTCCATCATCTG+TGG | + | chr8_2:21109775-21109794 | Msa1239400:intron | 40.0% |
| ! | ATGTTTTCCATCATCTGTGG+TGG | + | chr8_2:21109778-21109797 | Msa1239400:intron | 40.0% |
| CAGGTATATAAACCTGACTC+AGG | + | chr8_2:21109908-21109927 | Msa1239400:intron | 40.0% | |
| AATGACAGCATGAATGACCA+TGG | - | chr8_2:21110006-21110025 | None:intergenic | 40.0% | |
| ATTCATGCTGTCATTAGCGT+CGG | + | chr8_2:21110011-21110030 | Msa1239400:CDS | 40.0% | |
| ! | GTCCAGAAGGTGTAATTGAT+CGG | + | chr8_2:21110036-21110055 | Msa1239400:CDS | 40.0% |
| TTAATGAAGCCCTTTAGCAC+CGG | + | chr8_2:21110164-21110183 | Msa1239400:CDS | 40.0% | |
| ACCTGCAGTTTGTAAGAAAC+GGG | - | chr8_2:21110448-21110467 | None:intergenic | 40.0% | |
| GTGAAAAGAACCTCACGTTT+GGG | - | chr8_2:21110531-21110550 | None:intergenic | 40.0% | |
| !! | GTCACTAGACCAGCTTTATT+AGG | - | chr8_2:21110811-21110830 | None:intergenic | 40.0% |
| CGTTGTTTGTAACGGTTTCG+TGG | - | chr8_2:21104646-21104665 | None:intergenic | 45.0% | |
| ! | TTGGTTTGATAAGTCTCCGG+TGG | - | chr8_2:21104752-21104771 | None:intergenic | 45.0% |
| GAAGAATCACGTTCTTCTCG+AGG | + | chr8_2:21104999-21105018 | Msa1239400:CDS | 45.0% | |
| TGAAAGAACGGGAACGGTTT+CGG | + | chr8_2:21105129-21105148 | Msa1239400:CDS | 45.0% | |
| GAAACAGCGGCGAATTTGAT+CGG | + | chr8_2:21105212-21105231 | Msa1239400:CDS | 45.0% | |
| CGAATTTGATCGGAGGTTGA+CGG | + | chr8_2:21105222-21105241 | Msa1239400:CDS | 45.0% | |
| TAATCATAACCGTACACCGG+CGG | - | chr8_2:21105289-21105308 | None:intergenic | 45.0% | |
| !!! | GTTGTTAGGGTTTTAAGGGG+GGG | + | chr8_2:21105343-21105362 | Msa1239400:CDS | 45.0% |
| ! | CATGGAGAAGCTTTTGGATG+TGG | + | chr8_2:21106086-21106105 | Msa1239400:intron | 45.0% |
| TCGTGACCTCGTGTATTGAA+AGG | + | chr8_2:21106156-21106175 | Msa1239400:intron | 45.0% | |
| GGAGGGGACATAGATTATGA+GGG | + | chr8_2:21106315-21106334 | Msa1239400:intron | 45.0% | |
| ! | TCACGTATCGACAAGTTGTG+GGG | - | chr8_2:21106760-21106779 | None:intergenic | 45.0% |
| ! | CTCACGTATCGACAAGTTGT+GGG | - | chr8_2:21106761-21106780 | None:intergenic | 45.0% |
| CACAACTTGTCGATACGTGA+GGG | + | chr8_2:21106760-21106779 | Msa1239400:intron | 45.0% | |
| ACAACTTGTCGATACGTGAG+GGG | + | chr8_2:21106761-21106780 | Msa1239400:intron | 45.0% | |
| CTTCAACCCCCACAACTAAT+TGG | + | chr8_2:21106822-21106841 | Msa1239400:intron | 45.0% | |
| !! | ATGATGGATGAAGTGCTTCC+TGG | - | chr8_2:21108457-21108476 | None:intergenic | 45.0% |
| CTTGTAAAGCTACATCAGCG+AGG | + | chr8_2:21109380-21109399 | Msa1239400:intron | 45.0% | |
| AGCTAGGAAACTAGAGATGG+TGG | - | chr8_2:21109817-21109836 | None:intergenic | 45.0% | |
| TTCATGCTGTCATTAGCGTC+GGG | + | chr8_2:21110012-21110031 | Msa1239400:CDS | 45.0% | |
| CTCCGATCAATTACACCTTC+TGG | - | chr8_2:21110041-21110060 | None:intergenic | 45.0% | |
| TCAATAGTGGCGAGAGAGTA+AGG | - | chr8_2:21110104-21110123 | None:intergenic | 45.0% | |
| TCTCTCGCCACTATTGAGAA+TGG | + | chr8_2:21110107-21110126 | Msa1239400:CDS | 45.0% | |
| GGTGCTAAAGGGCTTCATTA+AGG | - | chr8_2:21110165-21110184 | None:intergenic | 45.0% | |
| TACCTCTAACCGCTTATCTC+CGG | - | chr8_2:21110186-21110205 | None:intergenic | 45.0% | |
| ACCCGTTTCTTACAAACTGC+AGG | + | chr8_2:21110444-21110463 | Msa1239400:intron | 45.0% | |
| CAAAATCTAGCCCAAACGTG+AGG | + | chr8_2:21110518-21110537 | Msa1239400:CDS | 45.0% | |
| GGTGAAAAGAACCTCACGTT+TGG | - | chr8_2:21110532-21110551 | None:intergenic | 45.0% | |
| GATGGACAGTTCTCTTCTCT+AGG | - | chr8_2:21110624-21110643 | None:intergenic | 45.0% | |
| TGCAGGTTCAGTGGTGATTT+CGG | + | chr8_2:21110742-21110761 | Msa1239400:intron | 45.0% | |
| !!! | AAACTAATAATTATTTTTTT+AGG | - | chr8_2:21107649-21107668 | None:intergenic | 5.0% |
| !! | TTATATATAATATCATAAAT+TGG | + | chr8_2:21110235-21110254 | Msa1239400:intron | 5.0% |
| ! | TGGCCGTTAGCGTGATTTTC+GGG | - | chr8_2:21104626-21104645 | None:intergenic | 50.0% |
| ! | GTGGCCGTTAGCGTGATTTT+CGG | - | chr8_2:21104627-21104646 | None:intergenic | 50.0% |
| TGATAAGTCTCCGGTGGAAC+TGG | - | chr8_2:21104746-21104765 | None:intergenic | 50.0% | |
| GCTACGTGAAAGAACGGGAA+CGG | + | chr8_2:21105123-21105142 | Msa1239400:CDS | 50.0% | |
| AGATGATCGGACGGATGAGA+TGG | + | chr8_2:21105315-21105334 | Msa1239400:CDS | 50.0% | |
| !!! | GGTTTTAAGGGGGGGATTGT+TGG | + | chr8_2:21105351-21105370 | Msa1239400:CDS | 50.0% |
| !! | GGGGATTGTTGGTTCAGGAT+CGG | + | chr8_2:21105362-21105381 | Msa1239400:CDS | 50.0% |
| AAAAGGAAGGGGTTGGGACT+TGG | + | chr8_2:21106293-21106312 | Msa1239400:intron | 50.0% | |
| AAAGGAAGGGGTTGGGACTT+GGG | + | chr8_2:21106294-21106313 | Msa1239400:intron | 50.0% | |
| GGGAGGGGACATAGATTATG+AGG | + | chr8_2:21106314-21106333 | Msa1239400:intron | 50.0% | |
| ! | CACGTATCGACAAGTTGTGG+GGG | - | chr8_2:21106759-21106778 | None:intergenic | 50.0% |
| ! | CCTCACGTATCGACAAGTTG+TGG | - | chr8_2:21106762-21106781 | None:intergenic | 50.0% |
| CCACAACTTGTCGATACGTG+AGG | + | chr8_2:21106759-21106778 | Msa1239400:intron | 50.0% | |
| ! | CTTGTCATGCTTGGCTCGTT+CGG | + | chr8_2:21107741-21107760 | Msa1239400:intron | 50.0% |
| CACTGCACTGCACCTATCTT+TGG | - | chr8_2:21108359-21108378 | None:intergenic | 50.0% | |
| GCCGAAGCGAAGAATTTCGT+AGG | + | chr8_2:21108773-21108792 | Msa1239400:CDS | 50.0% | |
| CTCTGCTGCAATCAGTCATC+AGG | + | chr8_2:21109486-21109505 | Msa1239400:intron | 50.0% | |
| TAGGAAGCCACCACAGATGA+TGG | - | chr8_2:21109788-21109807 | None:intergenic | 50.0% | |
| TCATCTGTGGTGGCTTCCTA+TGG | + | chr8_2:21109788-21109807 | Msa1239400:intron | 50.0% | |
| !! | CTAGAGATGGTGGATGCCAT+AGG | - | chr8_2:21109807-21109826 | None:intergenic | 50.0% |
| ! | CGCTTATCTCCGGTGCTAAA+GGG | - | chr8_2:21110176-21110195 | None:intergenic | 50.0% |
| ! | CCTTTAGCACCGGAGATAAG+CGG | + | chr8_2:21110174-21110193 | Msa1239400:CDS | 50.0% |
| TCTTGAGTAGTGGCAGCCAA+AGG | + | chr8_2:21110895-21110914 | Msa1239400:exon | 50.0% | |
| ! | TGGAACTGGCGTTGGGAGAA+GGG | - | chr8_2:21104732-21104751 | None:intergenic | 55.0% |
| ACCGGAACCATGCCGGATTT+CGG | + | chr8_2:21104812-21104831 | Msa1239400:CDS | 55.0% | |
| CGGATGAACGTGCCGAAATC+CGG | - | chr8_2:21104827-21104846 | None:intergenic | 55.0% | |
| TCGGCACGTTCATCCGTCAA+AGG | + | chr8_2:21104831-21104850 | Msa1239400:CDS | 55.0% | |
| ! | TCTTTCAGGTCTCAGCGTCG+TGG | + | chr8_2:21104937-21104956 | Msa1239400:CDS | 55.0% |
| ACAGCGGCGAATTTGATCGG+AGG | + | chr8_2:21105215-21105234 | Msa1239400:CDS | 55.0% | |
| TGATCGGAGGTTGACGGAGA+TGG | + | chr8_2:21105228-21105247 | Msa1239400:CDS | 55.0% | |
| !! | ATGGTGGTGGAGGAATACGC+CGG | + | chr8_2:21105247-21105266 | Msa1239400:CDS | 55.0% |
| GATCGGACGGATGAGATGGT+TGG | + | chr8_2:21105319-21105338 | Msa1239400:CDS | 55.0% | |
| !! | AAGGGGGGGATTGTTGGTTC+AGG | + | chr8_2:21105357-21105376 | Msa1239400:CDS | 55.0% |
| CTTCAAGTGCGCGCGTAATG+AGG | + | chr8_2:21105453-21105472 | Msa1239400:CDS | 55.0% | |
| GTGTGGAGAAGTGGGGAATC+CGG | + | chr8_2:21106452-21106471 | Msa1239400:intron | 55.0% | |
| TGTGGAGAAGTGGGGAATCC+GGG | + | chr8_2:21106453-21106472 | Msa1239400:intron | 55.0% | |
| GGAATCCGGGGTTTGAACTC+CGG | + | chr8_2:21106466-21106485 | Msa1239400:intron | 55.0% | |
| AAGAGCCGGAGTTCAAACCC+CGG | - | chr8_2:21106474-21106493 | None:intergenic | 55.0% | |
| ! | ATTAGCGTCGGGAGTCCAGA+AGG | + | chr8_2:21110023-21110042 | Msa1239400:CDS | 55.0% |
| ! | CCGCTTATCTCCGGTGCTAA+AGG | - | chr8_2:21110177-21110196 | None:intergenic | 55.0% |
| CACCGGAGATAAGCGGTTAG+AGG | + | chr8_2:21110181-21110200 | Msa1239400:CDS | 55.0% | |
| AGAGAACTGTCCATCTCGCG+CGG | + | chr8_2:21110629-21110648 | Msa1239400:CDS | 55.0% | |
| ACTTGAACATCCGCGCGAGA+TGG | - | chr8_2:21110642-21110661 | None:intergenic | 55.0% | |
| ATCTCGCGCGGATGTTCAAG+TGG | + | chr8_2:21110641-21110660 | Msa1239400:CDS | 55.0% | |
| ! | GGTTCCGTGCCGTTAGCTTC+GGG | - | chr8_2:21104542-21104561 | None:intergenic | 60.0% |
| ! | GGGTTCCGTGCCGTTAGCTT+CGG | - | chr8_2:21104543-21104562 | None:intergenic | 60.0% |
| ! | GGCGTTGGGAGAAGGGAATG+AGG | - | chr8_2:21104725-21104744 | None:intergenic | 60.0% |
| ! | GTGGAACTGGCGTTGGGAGA+AGG | - | chr8_2:21104733-21104752 | None:intergenic | 60.0% |
| TCTCCCAACGCCAGTTCCAC+CGG | + | chr8_2:21104733-21104752 | Msa1239400:CDS | 60.0% | |
| TCTCCGGTGGAACTGGCGTT+GGG | - | chr8_2:21104739-21104758 | None:intergenic | 60.0% | |
| ATCCGGCATGGTTCCGGTTC+CGG | - | chr8_2:21104810-21104829 | None:intergenic | 60.0% | |
| GCCGAAATCCGGCATGGTTC+CGG | - | chr8_2:21104816-21104835 | None:intergenic | 60.0% | |
| GAACGTGCCGAAATCCGGCA+TGG | - | chr8_2:21104822-21104841 | None:intergenic | 60.0% | |
| TCGGAGGTTGACGGAGATGG+TGG | + | chr8_2:21105231-21105250 | Msa1239400:CDS | 60.0% | |
| ! | GAGGTTGACGGAGATGGTGG+TGG | + | chr8_2:21105234-21105253 | Msa1239400:CDS | 60.0% |
| !! | GTTGACGGAGATGGTGGTGG+AGG | + | chr8_2:21105237-21105256 | Msa1239400:CDS | 60.0% |
| ATACGCCGGTAACGATGCGC+CGG | + | chr8_2:21105261-21105280 | Msa1239400:CDS | 60.0% | |
| GAAGGGGTTGGGACTTGGGA+GGG | + | chr8_2:21106298-21106317 | Msa1239400:intron | 60.0% | |
| AAGGGGTTGGGACTTGGGAG+GGG | + | chr8_2:21106299-21106318 | Msa1239400:intron | 60.0% | |
| GTGGAGAAGTGGGGAATCCG+GGG | + | chr8_2:21106454-21106473 | Msa1239400:intron | 60.0% | |
| ! | CATGCTTGGCTCGTTCGGCA+CGG | + | chr8_2:21107746-21107765 | Msa1239400:intron | 60.0% |
| CTCGCTGCAGATCCTGAGTC+AGG | - | chr8_2:21109923-21109942 | None:intergenic | 60.0% | |
| GGGTCCCGAAGCTAACGGCA+CGG | + | chr8_2:21104535-21104554 | Msa1239400:CDS | 65.0% | |
| GTCTCCGGTGGAACTGGCGT+TGG | - | chr8_2:21104740-21104759 | None:intergenic | 65.0% | |
| CCGGCGACGGAGAAGCTAGT+CGG | - | chr8_2:21104791-21104810 | None:intergenic | 65.0% | |
| !! | CCGACTAGCTTCTCCGTCGC+CGG | + | chr8_2:21104788-21104807 | Msa1239400:CDS | 65.0% |
| AGCTTCTCCGTCGCCGGAAC+CGG | + | chr8_2:21104794-21104813 | Msa1239400:CDS | 65.0% | |
| CATGGTTCCGGTTCCGGCGA+CGG | - | chr8_2:21104804-21104823 | None:intergenic | 65.0% | |
| TAACCGTACACCGGCGGCAC+CGG | - | chr8_2:21105283-21105302 | None:intergenic | 65.0% | |
| GGAAGGGGTTGGGACTTGGG+AGG | + | chr8_2:21106297-21106316 | Msa1239400:intron | 65.0% | |
| CGCCGGAACCGGAACCATGC+CGG | + | chr8_2:21104805-21104824 | Msa1239400:CDS | 70.0% | |
| !! | CGGCACCGGCGCATCGTTAC+CGG | - | chr8_2:21105269-21105288 | None:intergenic | 70.0% |
| !! | TAACGATGCGCCGGTGCCGC+CGG | + | chr8_2:21105270-21105289 | Msa1239400:CDS | 70.0% |
| !!! | GCGCCGGTGCCGCCGGTGTA+CGG | + | chr8_2:21105277-21105296 | Msa1239400:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 21104533 | 21111066 | 21104533 | ID=Msa1239400;Name=Msa1239400 |
| chr8_2 | mRNA | 21104533 | 21111066 | 21104533 | ID=Msa1239400-mRNA-1;Parent=Msa1239400;Name=Msa1239400-mRNA-1;_AED=0.03;_eAED=0.03;_QI=0|1|0.5|1|1|1|6|166|623 |
| chr8_2 | exon | 21104533 | 21105474 | 21104533 | ID=Msa1239400-mRNA-1:exon:7591;Parent=Msa1239400-mRNA-1 |
| chr8_2 | exon | 21108429 | 21108484 | 21108429 | ID=Msa1239400-mRNA-1:exon:7592;Parent=Msa1239400-mRNA-1 |
| chr8_2 | exon | 21108564 | 21108794 | 21108564 | ID=Msa1239400-mRNA-1:exon:7593;Parent=Msa1239400-mRNA-1 |
| chr8_2 | exon | 21109911 | 21110202 | 21109911 | ID=Msa1239400-mRNA-1:exon:7594;Parent=Msa1239400-mRNA-1 |
| chr8_2 | exon | 21110466 | 21110662 | 21110466 | ID=Msa1239400-mRNA-1:exon:7595;Parent=Msa1239400-mRNA-1 |
| chr8_2 | exon | 21110747 | 21111066 | 21110747 | ID=Msa1239400-mRNA-1:exon:7596;Parent=Msa1239400-mRNA-1 |
| chr8_2 | CDS | 21104533 | 21105474 | 21104533 | ID=Msa1239400-mRNA-1:cds;Parent=Msa1239400-mRNA-1 |
| chr8_2 | CDS | 21108429 | 21108484 | 21108429 | ID=Msa1239400-mRNA-1:cds;Parent=Msa1239400-mRNA-1 |
| chr8_2 | CDS | 21108564 | 21108794 | 21108564 | ID=Msa1239400-mRNA-1:cds;Parent=Msa1239400-mRNA-1 |
| chr8_2 | CDS | 21109911 | 21110202 | 21109911 | ID=Msa1239400-mRNA-1:cds;Parent=Msa1239400-mRNA-1 |
| chr8_2 | CDS | 21110466 | 21110662 | 21110466 | ID=Msa1239400-mRNA-1:cds;Parent=Msa1239400-mRNA-1 |
| chr8_2 | CDS | 21110747 | 21110900 | 21110747 | ID=Msa1239400-mRNA-1:cds;Parent=Msa1239400-mRNA-1 |
| chr8_2 | three_prime_UTR | 21110901 | 21111066 | 21110901 | ID=Msa1239400-mRNA-1:three_prime_utr;Parent=Msa1239400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
