Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1185460 | XP_013444988.1 | 90.851 | 623 | 21 | 3 | 1 | 587 | 1 | 623 | 0.0 | 1096 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1185460 | A0A072TQ96 | 90.851 | 623 | 21 | 3 | 1 | 587 | 1 | 623 | 0.0 | 1096 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015090 | Msa1185460 | 0.801789 | 7.628663e-49 | -8.615850e-47 |
| Msa0049750 | Msa1185460 | 0.804233 | 2.383512e-49 | -8.615850e-47 |
| Msa0071250 | Msa1185460 | 0.808153 | 3.562982e-50 | -8.615850e-47 |
| Msa0090550 | Msa1185460 | 0.808740 | 2.669839e-50 | -8.615850e-47 |
| Msa0092410 | Msa1185460 | 0.824013 | 1.015921e-53 | -8.615850e-47 |
| Msa0096700 | Msa1185460 | 0.818231 | 2.183647e-52 | -8.615850e-47 |
| Msa0098930 | Msa1185460 | 0.809189 | 2.139895e-50 | -8.615850e-47 |
| Msa0098990 | Msa1185460 | 0.808116 | 3.627069e-50 | -8.615850e-47 |
| Msa0111080 | Msa1185460 | 0.801063 | 1.074184e-48 | -8.615850e-47 |
| Msa0698440 | Msa1185460 | 0.805607 | 1.230492e-49 | -8.615850e-47 |
| Msa0705990 | Msa1185460 | 0.838924 | 2.153734e-57 | -8.615850e-47 |
| Msa0709120 | Msa1185460 | 0.801902 | 7.232153e-49 | -8.615850e-47 |
| Msa0721340 | Msa1185460 | 0.832130 | 1.126611e-55 | -8.615850e-47 |
| Msa0749440 | Msa1185460 | 0.820286 | 7.430678e-53 | -8.615850e-47 |
| Msa0750850 | Msa1185460 | 0.822024 | 2.954738e-53 | -8.615850e-47 |
| Msa0751850 | Msa1185460 | 0.814559 | 1.448255e-51 | -8.615850e-47 |
| Msa0763890 | Msa1185460 | 0.814110 | 1.819992e-51 | -8.615850e-47 |
| Msa0763920 | Msa1185460 | 0.818518 | 1.880073e-52 | -8.615850e-47 |
| Msa0765180 | Msa1185460 | 0.801363 | 9.328214e-49 | -8.615850e-47 |
| Msa0809140 | Msa1185460 | 0.800202 | 1.609877e-48 | -8.615850e-47 |
| Msa0812950 | Msa1185460 | 0.837688 | 4.485573e-57 | -8.615850e-47 |
| Msa0831850 | Msa1185460 | 0.818597 | 1.804020e-52 | -8.615850e-47 |
| Msa0832290 | Msa1185460 | 0.800540 | 1.373674e-48 | -8.615850e-47 |
| Msa0138020 | Msa1185460 | 0.813605 | 2.351668e-51 | -8.615850e-47 |
| Msa0142500 | Msa1185460 | 0.817350 | 3.451311e-52 | -8.615850e-47 |
| Msa0160960 | Msa1185460 | 0.802180 | 6.341219e-49 | -8.615850e-47 |
| Msa0187490 | Msa1185460 | 0.810876 | 9.269865e-51 | -8.615850e-47 |
| Msa0197610 | Msa1185460 | 0.800124 | 1.669320e-48 | -8.615850e-47 |
| Msa0222980 | Msa1185460 | 0.807688 | 4.473017e-50 | -8.615850e-47 |
| Msa0366210 | Msa1185460 | 0.812847 | 3.449857e-51 | -8.615850e-47 |
| Msa0371950 | Msa1185460 | 0.815085 | 1.107552e-51 | -8.615850e-47 |
| Msa0376600 | Msa1185460 | 0.814434 | 1.543968e-51 | -8.615850e-47 |
| Msa0387050 | Msa1185460 | 0.808458 | 3.066703e-50 | -8.615850e-47 |
| Msa0388730 | Msa1185460 | 0.804390 | 2.210751e-49 | -8.615850e-47 |
| Msa0397250 | Msa1185460 | 0.824207 | 9.145302e-54 | -8.615850e-47 |
| Msa0403490 | Msa1185460 | 0.838575 | 2.651478e-57 | -8.615850e-47 |
| Msa0422180 | Msa1185460 | 0.818626 | 1.776586e-52 | -8.615850e-47 |
| Msa0427580 | Msa1185460 | 0.826422 | 2.737318e-54 | -8.615850e-47 |
| Msa0448610 | Msa1185460 | 0.808159 | 3.551186e-50 | -8.615850e-47 |
| Msa0481280 | Msa1185460 | 0.810836 | 9.454345e-51 | -8.615850e-47 |
| Msa0992580 | Msa1185460 | 0.806350 | 8.586599e-50 | -8.615850e-47 |
| Msa0994370 | Msa1185460 | 0.803813 | 2.914539e-49 | -8.615850e-47 |
| Msa0994910 | Msa1185460 | 0.807611 | 4.644344e-50 | -8.615850e-47 |
| Msa1024680 | Msa1185460 | 0.824728 | 6.897941e-54 | -8.615850e-47 |
| Msa1026640 | Msa1185460 | 0.806822 | 6.826772e-50 | -8.615850e-47 |
| Msa1054510 | Msa1185460 | 0.826409 | 2.755615e-54 | -8.615850e-47 |
| Msa1063400 | Msa1185460 | 0.800113 | 1.678369e-48 | -8.615850e-47 |
| Msa1063420 | Msa1185460 | 0.815378 | 9.532526e-52 | -8.615850e-47 |
| Msa1071320 | Msa1185460 | 0.810417 | 1.165020e-50 | -8.615850e-47 |
| Msa1077340 | Msa1185460 | 0.814701 | 1.347409e-51 | -8.615850e-47 |
| Msa1081790 | Msa1185460 | -0.824512 | 7.756351e-54 | -8.615850e-47 |
| Msa1094280 | Msa1185460 | 0.805309 | 1.420554e-49 | -8.615850e-47 |
| Msa0240270 | Msa1185460 | 0.812264 | 4.626323e-51 | -8.615850e-47 |
| Msa0244140 | Msa1185460 | 0.801901 | 7.235989e-49 | -8.615850e-47 |
| Msa0244190 | Msa1185460 | 0.807346 | 5.286018e-50 | -8.615850e-47 |
| Msa0262370 | Msa1185460 | 0.833798 | 4.334645e-56 | -8.615850e-47 |
| Msa0269560 | Msa1185460 | 0.830587 | 2.700661e-55 | -8.615850e-47 |
| Msa0284450 | Msa1185460 | 0.809267 | 2.058626e-50 | -8.615850e-47 |
| Msa0300150 | Msa1185460 | 0.821488 | 3.931786e-53 | -8.615850e-47 |
| Msa0309270 | Msa1185460 | 0.811094 | 8.314641e-51 | -8.615850e-47 |
| Msa0311470 | Msa1185460 | 0.809351 | 1.975246e-50 | -8.615850e-47 |
| Msa0333970 | Msa1185460 | -0.802617 | 5.151998e-49 | -8.615850e-47 |
| Msa0337590 | Msa1185460 | 0.823314 | 1.480312e-53 | -8.615850e-47 |
| Msa1107200 | Msa1185460 | 0.800405 | 1.463893e-48 | -8.615850e-47 |
| Msa1107260 | Msa1185460 | 0.825809 | 3.828630e-54 | -8.615850e-47 |
| Msa1109810 | Msa1185460 | 0.800497 | 1.401644e-48 | -8.615850e-47 |
| Msa1115280 | Msa1185460 | 0.826607 | 2.472697e-54 | -8.615850e-47 |
| Msa1143020 | Msa1185460 | 0.822658 | 2.106131e-53 | -8.615850e-47 |
| Msa1144040 | Msa1185460 | 0.819291 | 1.254624e-52 | -8.615850e-47 |
| Msa1150780 | Msa1185460 | 0.808041 | 3.762291e-50 | -8.615850e-47 |
| Msa1150900 | Msa1185460 | 0.816357 | 5.764584e-52 | -8.615850e-47 |
| Msa1166090 | Msa1185460 | -0.816942 | 4.263138e-52 | -8.615850e-47 |
| Msa1171140 | Msa1185460 | 0.828784 | 7.413824e-55 | -8.615850e-47 |
| Msa1177780 | Msa1185460 | 0.804287 | 2.322360e-49 | -8.615850e-47 |
| Msa1185460 | Msa1187590 | 0.834356 | 3.142089e-56 | -8.615850e-47 |
| Msa1185460 | Msa1207310 | 0.800374 | 1.484794e-48 | -8.615850e-47 |
| Msa1185460 | Msa1208370 | 0.818677 | 1.729854e-52 | -8.615850e-47 |
| Msa1185460 | Msa1209190 | 0.837210 | 5.943996e-57 | -8.615850e-47 |
| Msa1185460 | Msa1209860 | 0.832101 | 1.145586e-55 | -8.615850e-47 |
| Msa1185460 | Msa1218580 | 0.801905 | 7.219982e-49 | -8.615850e-47 |
| Msa1185460 | Msa1239400 | 0.876602 | 1.225265e-68 | -8.615850e-47 |
| Msa1185460 | Msa1244930 | 0.821256 | 4.448427e-53 | -8.615850e-47 |
| Msa1185460 | Msa1250110 | 0.823657 | 1.230791e-53 | -8.615850e-47 |
| Msa1185460 | Msa1250730 | 0.819970 | 8.780222e-53 | -8.615850e-47 |
| Msa1185460 | Msa1270660 | 0.840259 | 9.685380e-58 | -8.615850e-47 |
| Msa1185460 | Msa1270730 | 0.837391 | 5.342963e-57 | -8.615850e-47 |
| Msa1185460 | Msa1280750 | 0.837219 | 5.913625e-57 | -8.615850e-47 |
| Msa1185460 | Msa1285260 | 0.815946 | 7.123048e-52 | -8.615850e-47 |
| Msa1185460 | Msa1319990 | 0.810636 | 1.044638e-50 | -8.615850e-47 |
| Msa1185460 | Msa1332050 | 0.836601 | 8.506254e-57 | -8.615850e-47 |
| Msa1185460 | Msa1335230 | 0.852392 | 4.756799e-61 | -8.615850e-47 |
| Msa1185460 | Msa1360240 | 0.803236 | 3.838392e-49 | -8.615850e-47 |
| Msa1185460 | Msa1369920 | -0.811811 | 5.807497e-51 | -8.615850e-47 |
| Msa1185460 | Msa1371940 | 0.827186 | 1.798207e-54 | -8.615850e-47 |
| Msa1185460 | Msa1378680 | 0.823210 | 1.565950e-53 | -8.615850e-47 |
| Msa1185460 | Msa1384100 | 0.802219 | 6.222524e-49 | -8.615850e-47 |
| Msa1185460 | Msa1396400 | -0.817707 | 2.867411e-52 | -8.615850e-47 |
| Msa1185460 | Msa1401460 | 0.803318 | 3.691880e-49 | -8.615850e-47 |
| Msa1185460 | Msa1420270 | 0.810906 | 9.132999e-51 | -8.615850e-47 |
| Msa1185460 | Msa1423820 | 0.842777 | 2.102035e-58 | -8.615850e-47 |
| Msa1185460 | Msa1428780 | 0.812521 | 4.065981e-51 | -8.615850e-47 |
| Msa1185460 | Msa1430130 | 0.831503 | 1.608578e-55 | -8.615850e-47 |
| Msa1185460 | Msa1437130 | 0.820678 | 6.041553e-53 | -8.615850e-47 |
| Msa1185460 | Msa1440790 | 0.808029 | 3.784630e-50 | -8.615850e-47 |
| Msa1185460 | Msa1442790 | 0.807162 | 5.783182e-50 | -8.615850e-47 |
| Msa1185460 | Msa1444120 | 0.811569 | 6.556970e-51 | -8.615850e-47 |
| Msa1185460 | Msa1460750 | 0.830557 | 2.746675e-55 | -8.615850e-47 |
| Msa0482940 | Msa1185460 | 0.807048 | 6.114120e-50 | -8.615850e-47 |
| Msa0496970 | Msa1185460 | 0.803151 | 3.997486e-49 | -8.615850e-47 |
| Msa0518170 | Msa1185460 | 0.835107 | 2.033903e-56 | -8.615850e-47 |
| Msa0566350 | Msa1185460 | 0.814926 | 1.201163e-51 | -8.615850e-47 |
| Msa0566750 | Msa1185460 | 0.811454 | 6.946803e-51 | -8.615850e-47 |
| Msa0569780 | Msa1185460 | 0.805298 | 1.427963e-49 | -8.615850e-47 |
| Msa0844110 | Msa1185460 | 0.805268 | 1.449026e-49 | -8.615850e-47 |
| Msa0861470 | Msa1185460 | 0.803155 | 3.989434e-49 | -8.615850e-47 |
| Msa0861570 | Msa1185460 | 0.803418 | 3.518629e-49 | -8.615850e-47 |
| Msa0877710 | Msa1185460 | 0.802674 | 5.014945e-49 | -8.615850e-47 |
| Msa0880810 | Msa1185460 | 0.804490 | 2.107287e-49 | -8.615850e-47 |
| Msa0902830 | Msa1185460 | 0.829298 | 5.567195e-55 | -8.615850e-47 |
| Msa0921420 | Msa1185460 | 0.817578 | 3.066595e-52 | -8.615850e-47 |
| Msa0960390 | Msa1185460 | 0.814204 | 1.735262e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1185460 | MtrunA17_Chr8g0351061 | 90.851 | 623 | 21 | 3 | 1 | 587 | 1 | 623 | 0.0 | 1096 |
| Msa1185460 | MtrunA17_Chr1g0163291 | 55.924 | 633 | 200 | 11 | 1 | 587 | 1 | 600 | 0.0 | 677 |
| Msa1185460 | MtrunA17_Chr3g0115381 | 38.347 | 472 | 253 | 6 | 151 | 586 | 287 | 756 | 4.67e-110 | 346 |
| Msa1185460 | MtrunA17_Chr5g0424991 | 40.000 | 400 | 192 | 4 | 151 | 503 | 505 | 903 | 3.68e-91 | 300 |
| Msa1185460 | MtrunA17_Chr5g0399331 | 30.400 | 125 | 82 | 2 | 357 | 481 | 301 | 420 | 1.30e-11 | 67.4 |
| Msa1185460 | MtrunA17_Chr5g0403231 | 34.286 | 105 | 62 | 1 | 405 | 502 | 395 | 499 | 3.30e-11 | 66.2 |
| Msa1185460 | MtrunA17_Chr5g0425001 | 34.579 | 107 | 65 | 4 | 482 | 587 | 27 | 129 | 5.87e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1185460 | AT3G11920.1 | 51.950 | 564 | 225 | 7 | 64 | 587 | 73 | 630 | 0.0 | 564 |
| Msa1185460 | AT4G08550.2 | 38.994 | 477 | 244 | 8 | 151 | 587 | 222 | 691 | 8.74e-107 | 336 |
| Msa1185460 | AT4G08550.1 | 34.664 | 476 | 212 | 9 | 151 | 587 | 222 | 637 | 5.87e-81 | 267 |
| Msa1185460 | AT1G16750.2 | 41.837 | 98 | 53 | 1 | 388 | 485 | 285 | 378 | 1.47e-15 | 79.3 |
| Msa1185460 | AT1G16750.1 | 38.889 | 126 | 68 | 3 | 388 | 510 | 285 | 404 | 1.66e-15 | 80.1 |
| Msa1185460 | AT3G13000.1 | 25.893 | 224 | 123 | 6 | 385 | 570 | 303 | 521 | 3.20e-15 | 79.3 |
| Msa1185460 | AT3G13000.3 | 25.893 | 224 | 123 | 6 | 385 | 570 | 332 | 550 | 3.62e-15 | 79.0 |
| Msa1185460 | AT3G13000.2 | 25.893 | 224 | 123 | 6 | 385 | 570 | 332 | 550 | 3.62e-15 | 79.0 |
| Msa1185460 | AT5G47380.3 | 34.513 | 113 | 64 | 2 | 373 | 482 | 328 | 433 | 7.05e-11 | 65.5 |
| Msa1185460 | AT5G47380.5 | 34.821 | 112 | 63 | 2 | 373 | 481 | 272 | 376 | 7.68e-11 | 65.5 |
| Msa1185460 | AT5G47380.2 | 34.513 | 113 | 64 | 2 | 373 | 482 | 328 | 433 | 8.90e-11 | 65.1 |
Find 123 sgRNAs with CRISPR-Local
Find 364 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAATGAAGTGGATTATTTA+TGG | 0.153498 | 8_1:+22666295 | None:intergenic |
| TCCCTTGCTATTATTGAAAA+TGG | 0.165994 | 8_1:-22660860 | Msa1185460:CDS |
| GTGACAGAGTTCAATCTTTC+AGG | 0.192781 | 8_1:-22665969 | Msa1185460:CDS |
| TGCAGGTTCAGTGGTGATTT+TGG | 0.218554 | 8_1:-22660143 | Msa1185460:intron |
| TTTATATGAATTATCTGTTT+TGG | 0.219872 | 8_1:+22659945 | None:intergenic |
| ATTAAAGCATTTGTGGATAA+AGG | 0.223252 | 8_1:+22662371 | None:intergenic |
| CCTTTCATCTCATCTTCTTC+AGG | 0.229352 | 8_1:+22665921 | None:intergenic |
| CAAATTAAAGCTGCTGTCTT+TGG | 0.259547 | 8_1:+22662321 | None:intergenic |
| TCAATAATAGCAAGGGAATA+AGG | 0.262769 | 8_1:+22660866 | None:intergenic |
| AACTGTTTGTGTTCGTTTCT+CGG | 0.267209 | 8_1:+22666328 | None:intergenic |
| AAATTCTTCGCTTCGGCTAA+TGG | 0.290330 | 8_1:+22662221 | None:intergenic |
| TTAATGACCAATCAAAATTC+TGG | 0.292429 | 8_1:+22660015 | None:intergenic |
| CGGCACCGGCGCATCGTTAC+CGG | 0.301743 | 8_1:+22665632 | None:intergenic |
| ATCACTCAAATTCTTTCCTT+TGG | 0.312487 | 8_1:+22659974 | None:intergenic |
| AATGATTTCCTGTATTTGAT+AGG | 0.313324 | 8_1:-22660896 | Msa1185460:CDS |
| GTCACTAGACCAGCTTTATT+AGG | 0.316643 | 8_1:+22660077 | None:intergenic |
| CGCGAAAATTAAAGCATTTG+TGG | 0.321838 | 8_1:+22662364 | None:intergenic |
| TTCTTCAACGAGAAGCTTAT+AGG | 0.322872 | 8_1:-22665735 | Msa1185460:CDS |
| CTCCTATCAATTACACCTTC+TGG | 0.325024 | 8_1:+22660929 | None:intergenic |
| AAATGAAGTGGATTATTTAT+GGG | 0.326835 | 8_1:+22666296 | None:intergenic |
| GGGTTCCGTGCCGTTAGCTT+CGG | 0.329454 | 8_1:+22666349 | None:intergenic |
| ATGAGATGGTTGGAGTTGTT+AGG | 0.334069 | 8_1:-22665569 | Msa1185460:CDS |
| TTAAAGCATTTGTGGATAAA+GGG | 0.347812 | 8_1:+22662372 | None:intergenic |
| AAGGGCTTCATTAAGGAATA+TGG | 0.350017 | 8_1:+22660812 | None:intergenic |
| ATGATGGATGAAGTGCTTCC+TGG | 0.361470 | 8_1:+22662534 | None:intergenic |
| ACACATCTCTTGAGTGATAA+TGG | 0.362434 | 8_1:-22660056 | Msa1185460:CDS |
| AGTGCTAAAGGGCTTCATTA+AGG | 0.365755 | 8_1:+22660805 | None:intergenic |
| GGAGGAACCATGCCGGATTT+CGG | 0.375994 | 8_1:-22666080 | Msa1185460:CDS |
| ATTTCTTAGGCTGTTGAAAT+CGG | 0.379144 | 8_1:-22662568 | Msa1185460:intron |
| TTCTGGTAAGATATATTAAC+AGG | 0.382018 | 8_1:+22660032 | None:intergenic |
| TGAGATGGTTGGAGTTGTTA+GGG | 0.400490 | 8_1:-22665568 | Msa1185460:CDS |
| CGGATGAACGTGCCGAAATC+CGG | 0.409121 | 8_1:+22666068 | None:intergenic |
| TGATAAGTCTCCGGTGGAAC+TGG | 0.414658 | 8_1:+22666146 | None:intergenic |
| ATAAATCATTGCTCCTTTGA+CGG | 0.420240 | 8_1:+22666048 | None:intergenic |
| CGCTTATCTCCAGTGCTAAA+GGG | 0.421964 | 8_1:+22660794 | None:intergenic |
| CCGCTTATCTCCAGTGCTAA+AGG | 0.429018 | 8_1:+22660793 | None:intergenic |
| ACTGTTTGTGTTCGTTTCTC+GGG | 0.432528 | 8_1:+22666329 | None:intergenic |
| GGTTCCGTGCCGTTAGCTTC+GGG | 0.441529 | 8_1:+22666350 | None:intergenic |
| GTGGAACTGGCGTTGGGAGA+AGG | 0.445193 | 8_1:+22666159 | None:intergenic |
| TGTTGGTTCAGGATCGGATA+AGG | 0.447877 | 8_1:-22665530 | Msa1185460:CDS |
| TGATCGAACAGGAACGGTTT+CGG | 0.467729 | 8_1:-22665769 | Msa1185460:CDS |
| GCGCCGGTGCCGCCTGTGTA+CGG | 0.470614 | 8_1:-22665621 | Msa1185460:CDS |
| GTTGACGGAGATGGTGGTGG+AGG | 0.475112 | 8_1:-22665661 | Msa1185460:CDS |
| CAGCAGCTTTAATTTGTGAC+AGG | 0.479407 | 8_1:-22662314 | Msa1185460:CDS |
| TTAATGAAGCCCTTTAGCAC+TGG | 0.484515 | 8_1:-22660803 | Msa1185460:CDS |
| TCTCCGGTGGAACTGGCGTT+GGG | 0.485239 | 8_1:+22666153 | None:intergenic |
| AAGAGAAAGAAGTGCTTAAG+TGG | 0.485757 | 8_1:-22660118 | Msa1185460:CDS |
| TGGAACTGGCGTTGGGAGAA+GGG | 0.491747 | 8_1:+22666160 | None:intergenic |
| TGAAAATGATAGAATTGAAG+TGG | 0.491803 | 8_1:-22660288 | Msa1185460:CDS |
| GTCCAGAAGGTGTAATTGAT+AGG | 0.492423 | 8_1:-22660931 | Msa1185460:CDS |
| GATGTCCTCCTATCAAATAC+AGG | 0.492869 | 8_1:+22660888 | None:intergenic |
| TCTCCCAACGCCAGTTCCAC+CGG | 0.493660 | 8_1:-22666156 | Msa1185460:CDS |
| ATTATACAAATTCAAGAAGA+AGG | 0.494261 | 8_1:+22660988 | None:intergenic |
| ACCTACGAAATTCTTCGCTT+CGG | 0.495158 | 8_1:+22662214 | None:intergenic |
| AGTTAATATTGTTGAACTAT+CGG | 0.499292 | 8_1:-22661026 | Msa1185460:CDS |
| CGAATTTGAACGGAGGTTGA+CGG | 0.499866 | 8_1:-22665676 | Msa1185460:CDS |
| GAAATCCGGCATGGTTCCTC+CGG | 0.501095 | 8_1:+22666082 | None:intergenic |
| AAAGAGCTACGTGATCGAAC+AGG | 0.502581 | 8_1:-22665780 | Msa1185460:CDS |
| GTCTCCGGTGGAACTGGCGT+TGG | 0.502680 | 8_1:+22666152 | None:intergenic |
| AAATCGGAAAAGAGTTATCC+AGG | 0.503742 | 8_1:-22662552 | Msa1185460:CDS |
| CGTTGTTAGTAACGGTTTCG+TGG | 0.504097 | 8_1:+22666246 | None:intergenic |
| ATGATTATGTTGAAGATGAT+CGG | 0.504698 | 8_1:-22665596 | Msa1185460:CDS |
| TTGTTGGTTTGATAAGTCTC+CGG | 0.508769 | 8_1:+22666137 | None:intergenic |
| GAAACAGCGGCGAATTTGAA+CGG | 0.510170 | 8_1:-22665686 | Msa1185460:CDS |
| CTTGAATTTGTATAATGCCA+TGG | 0.511853 | 8_1:-22660981 | Msa1185460:CDS |
| TGAACGGAGGTTGACGGAGA+TGG | 0.514676 | 8_1:-22665670 | Msa1185460:CDS |
| GTCATTAAATTCTTGAGTAG+TGG | 0.520931 | 8_1:-22660000 | Msa1185460:exon |
| GAGGTTGACGGAGATGGTGG+TGG | 0.522568 | 8_1:-22665664 | Msa1185460:CDS |
| TACTTGAAACCTAATAAAGC+TGG | 0.523318 | 8_1:-22660086 | Msa1185460:CDS |
| GATTTCCTGTATTTGATAGG+AGG | 0.524616 | 8_1:-22660893 | Msa1185460:CDS |
| ATACAGGAAATCATTGAAGA+AGG | 0.525977 | 8_1:+22660904 | None:intergenic |
| CCGACTAGCTTCTCCGTCGC+CGG | 0.527302 | 8_1:-22666101 | Msa1185460:CDS |
| TAACCGTACACAGGCGGCAC+CGG | 0.529019 | 8_1:+22665618 | None:intergenic |
| CTTCAAGTGCGCGCGTAATG+AGG | 0.530496 | 8_1:-22665445 | Msa1185460:intron |
| AGAGTTGTAGATGAATTAAG+AGG | 0.530709 | 8_1:-22660329 | Msa1185460:CDS |
| ACTAATTTCGTTGTTAGTAA+CGG | 0.534404 | 8_1:+22666238 | None:intergenic |
| TCGGGTAAAACGAAATGAAG+TGG | 0.537153 | 8_1:+22666284 | None:intergenic |
| GGGGATTGTTGGTTCAGGAT+CGG | 0.542408 | 8_1:-22665536 | Msa1185460:CDS |
| GTTTCGACAATCGATTGAAG+AGG | 0.545742 | 8_1:-22665997 | Msa1185460:CDS |
| CGGCATGGTTCCTCCGGCGA+CGG | 0.548482 | 8_1:+22666088 | None:intergenic |
| GATCGGACGGATGAGATGGT+TGG | 0.555673 | 8_1:-22665579 | Msa1185460:CDS |
| ACTTGAACATCCGCGCGAGA+TGG | 0.556169 | 8_1:+22660246 | None:intergenic |
| ATCTCGCGCGGATGTTCAAG+TGG | 0.561832 | 8_1:-22660244 | Msa1185460:intron |
| GATGGACAGTTCTCTTCTCT+AGG | 0.564145 | 8_1:+22660264 | None:intergenic |
| TTCATGCAGTCATTAGCGTC+GGG | 0.564975 | 8_1:-22660955 | Msa1185460:CDS |
| TCGGCACGTTCATCCGTCAA+AGG | 0.565167 | 8_1:-22666061 | Msa1185460:CDS |
| GGCGTTGGGAGAAGGGAATG+AGG | 0.573445 | 8_1:+22666167 | None:intergenic |
| ATTCATGCAGTCATTAGCGT+CGG | 0.573907 | 8_1:-22660956 | Msa1185460:CDS |
| CCTGAAGAAGATGAGATGAA+AGG | 0.576628 | 8_1:-22665921 | Msa1185460:CDS |
| TTCTCGTTGAAGAAAATCAT+CGG | 0.578954 | 8_1:+22665744 | None:intergenic |
| AGAAGCATAAGACTCAAGAA+TGG | 0.582137 | 8_1:+22662272 | None:intergenic |
| TTCAACGAGAAGCTTATAGG+AGG | 0.582390 | 8_1:-22665732 | Msa1185460:CDS |
| ACTAGCTTCTCCGTCGCCGG+AGG | 0.587400 | 8_1:-22666098 | Msa1185460:CDS |
| TTAGGTAGGAGTAGATTCTG+TGG | 0.587781 | 8_1:-22659839 | None:intergenic |
| CGTCGCCGGAGGAACCATGC+CGG | 0.599821 | 8_1:-22666087 | Msa1185460:CDS |
| TTGGTTTGATAAGTCTCCGG+TGG | 0.600131 | 8_1:+22666140 | None:intergenic |
| ATTAGCGTCGGGAGTCCAGA+AGG | 0.601450 | 8_1:-22660944 | Msa1185460:CDS |
| GAAGAATCACGTTCTTCTCG+AGG | 0.623420 | 8_1:-22665899 | Msa1185460:CDS |
| CCGGCGACGGAGAAGCTAGT+CGG | 0.623807 | 8_1:+22666101 | None:intergenic |
| TTACCCGAAAATCACGCTAA+CGG | 0.625572 | 8_1:-22666269 | Msa1185460:CDS |
| TCTTGAGTAGTGGCAGCCAA+AGG | 0.638308 | 8_1:-22659990 | Msa1185460:exon |
| GAACGTGCCGAAATCCGGCA+TGG | 0.647367 | 8_1:+22666073 | None:intergenic |
| AGATGATCGGACGGATGAGA+TGG | 0.650204 | 8_1:-22665583 | Msa1185460:CDS |
| TGGTTCAGGATCGGATAAGG+AGG | 0.654976 | 8_1:-22665527 | Msa1185460:CDS |
| GCCGAAGCGAAGAATTTCGT+AGG | 0.664023 | 8_1:-22662215 | Msa1185460:intron |
| TCTTTCAGGTCTCAGCGTCG+TGG | 0.666569 | 8_1:-22665955 | Msa1185460:CDS |
| GTATTCTCAGATGTAATCAG+AGG | 0.669506 | 8_1:-22660838 | Msa1185460:CDS |
| ACGGAGGTTGACGGAGATGG+TGG | 0.669844 | 8_1:-22665667 | Msa1185460:CDS |
| TTATGTTGAAGATGATCGGA+CGG | 0.673531 | 8_1:-22665592 | Msa1185460:CDS |
| AGAGAACTGTCCATCTCGCG+CGG | 0.673938 | 8_1:-22660256 | Msa1185460:CDS |
| TTGAATTCACTTCGAAACAG+CGG | 0.682637 | 8_1:-22665699 | Msa1185460:CDS |
| TAATCATAACCGTACACAGG+CGG | 0.683309 | 8_1:+22665612 | None:intergenic |
| CCTTTAGCACTGGAGATAAG+CGG | 0.683777 | 8_1:-22660793 | Msa1185460:intron |
| AACGAAATTAGTTACGAACA+AGG | 0.684970 | 8_1:-22666227 | Msa1185460:CDS |
| GCTACGTGATCGAACAGGAA+CGG | 0.685862 | 8_1:-22665775 | Msa1185460:CDS |
| ACATAATCATAACCGTACAC+AGG | 0.692087 | 8_1:+22665609 | None:intergenic |
| GGGTCCCGAAGCTAACGGCA+CGG | 0.693360 | 8_1:-22666354 | Msa1185460:CDS |
| AATGACTGCATGAATGACCA+TGG | 0.716324 | 8_1:+22660964 | None:intergenic |
| GTAATGGGTCCCGAAGCTAA+CGG | 0.723744 | 8_1:-22666359 | Msa1185460:CDS |
| ACAGCGGCGAATTTGAACGG+AGG | 0.733174 | 8_1:-22665683 | Msa1185460:CDS |
| ATGGTGGTGGAGGAATACGC+CGG | 0.754280 | 8_1:-22665651 | Msa1185460:CDS |
| GAAATTAGTTACGAACAAGG+AGG | 0.763595 | 8_1:-22666224 | Msa1185460:CDS |
| AAGTTGCAGAGATTGTTCCG+CGG | 0.765879 | 8_1:-22665874 | Msa1185460:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAACTAATAATTATTGTTTT+AGG | + | chr8_1:22662835-22662854 | None:intergenic | 10.0% |
| !!! | TTATGTTTTCAAATTTAAAA+CGG | - | chr8_1:22663119-22663138 | Msa1185460:intron | 10.0% |
| !!! | TTTTTAATTTCTTAACAAAA+TGG | - | chr8_1:22664759-22664778 | Msa1185460:intron | 10.0% |
| !! | TTATATATAATATCATGAAT+TGG | - | chr8_1:22665464-22665483 | Msa1185460:CDS | 10.0% |
| !! | AAAAATATATTTCATAAGAA+AGG | + | chr8_1:22666034-22666053 | None:intergenic | 10.0% |
| !! | AATTGTTTATGAAAAAGAAA+GGG | - | chr8_1:22661602-22661621 | Msa1185460:intron | 15.0% |
| !!! | TTTTGTCACAAATTTAAAAT+TGG | - | chr8_1:22661938-22661957 | Msa1185460:intron | 15.0% |
| !! | AATTAAATTGATGTAATAGA+TGG | - | chr8_1:22662512-22662531 | Msa1185460:intron | 15.0% |
| !!! | ATATCCTAATTATTGTTATT+AGG | + | chr8_1:22662753-22662772 | None:intergenic | 15.0% |
| !! | TAAAGATAATTGAAAATATG+TGG | - | chr8_1:22663306-22663325 | Msa1185460:intron | 15.0% |
| !!! | AGAATAAAAAACAATTTTGA+GGG | - | chr8_1:22663351-22663370 | Msa1185460:intron | 15.0% |
| !! | AATGCAAATAATTATTATAG+TGG | + | chr8_1:22663601-22663620 | None:intergenic | 15.0% |
| !!! | TACATTTAATTCTTTTATTG+TGG | - | chr8_1:22664027-22664046 | Msa1185460:intron | 15.0% |
| !!! | TTATATGAATTATCTGTTTT+GGG | + | chr8_1:22666253-22666272 | None:intergenic | 15.0% |
| !!! | TTTATATGAATTATCTGTTT+TGG | + | chr8_1:22666254-22666273 | None:intergenic | 15.0% |
| !!! | GTTTTTCAAAAAAAAAAAGA+AGG | - | chr8_1:22666329-22666348 | Msa1185460:CDS | 15.0% |
| !!! | AAAAAAAAGAAGGTATTTTT+AGG | - | chr8_1:22666339-22666358 | Msa1185460:CDS | 15.0% |
| !!! | AAATGAAGTGGATTATTTAT+GGG | + | chr8_1:22659903-22659922 | None:intergenic | 20.0% |
| !!! | ATTGTTAAGAATTGTTTTGA+AGG | - | chr8_1:22660698-22660717 | Msa1185460:intron | 20.0% |
| !!! | TTGTTAAGAATTGTTTTGAA+GGG | - | chr8_1:22660699-22660718 | Msa1185460:intron | 20.0% |
| !! | TACAGAAATACGTAAATATA+CGG | + | chr8_1:22660791-22660810 | None:intergenic | 20.0% |
| !!! | TTTTAATCGTATTTGTTTGT+TGG | - | chr8_1:22660812-22660831 | Msa1185460:CDS | 20.0% |
| !!! | AAATAATTGGTTTAGCTAAA+TGG | + | chr8_1:22660970-22660989 | None:intergenic | 20.0% |
| !! | TTTAGCTAAACCAATTATTT+AGG | - | chr8_1:22660970-22660989 | Msa1185460:CDS | 20.0% |
| !! | CAATTGTTTATGAAAAAGAA+AGG | - | chr8_1:22661601-22661620 | Msa1185460:intron | 20.0% |
| !! | ATTGTTTATGAAAAAGAAAG+GGG | - | chr8_1:22661603-22661622 | Msa1185460:intron | 20.0% |
| !!! | GGGAGATTTTATATTATAAA+TGG | - | chr8_1:22661656-22661675 | Msa1185460:intron | 20.0% |
| !!! | TTAAGAACATTTTTTTTAGC+TGG | - | chr8_1:22661698-22661717 | Msa1185460:intron | 20.0% |
| !! | TATACAATGAAAATTATGTG+TGG | - | chr8_1:22661757-22661776 | Msa1185460:intron | 20.0% |
| !! | TCATTAAATTGATACCATAT+GGG | - | chr8_1:22661977-22661996 | Msa1185460:intron | 20.0% |
| !! | AATTCACAAATCATATTTGT+GGG | + | chr8_1:22662435-22662454 | None:intergenic | 20.0% |
| !! | TAATTCACAAATCATATTTG+TGG | + | chr8_1:22662436-22662455 | None:intergenic | 20.0% |
| !! | AAACATATTAGATAAATCGA+AGG | - | chr8_1:22662478-22662497 | Msa1185460:intron | 20.0% |
| !! | ATAGATGGATAACTAAATAA+AGG | - | chr8_1:22662527-22662546 | Msa1185460:CDS | 20.0% |
| !! | TAGATGGATAACTAAATAAA+GGG | - | chr8_1:22662528-22662547 | Msa1185460:CDS | 20.0% |
| !!! | GAGAATAAAAAACAATTTTG+AGG | - | chr8_1:22663350-22663369 | Msa1185460:intron | 20.0% |
| !! | ATATTCACATTTGATTCAAA+GGG | + | chr8_1:22663522-22663541 | None:intergenic | 20.0% |
| !! | TTATATAGCAAATTCTATCA+AGG | + | chr8_1:22664202-22664221 | None:intergenic | 20.0% |
| !! | CTACTGAAAACAATTATTAT+AGG | + | chr8_1:22664340-22664359 | None:intergenic | 20.0% |
| !! | TAACATCATTGTAATTTAAG+TGG | + | chr8_1:22664902-22664921 | None:intergenic | 20.0% |
| !! | AGTTAATATTGTTGAACTAT+CGG | - | chr8_1:22665170-22665189 | Msa1185460:intron | 20.0% |
| !! | ATTATACAAATTCAAGAAGA+AGG | + | chr8_1:22665211-22665230 | None:intergenic | 20.0% |
| !! | AACATGTAAATGATTGATTA+TGG | - | chr8_1:22665723-22665742 | Msa1185460:CDS | 20.0% |
| !!! | CTTATGAAATATATTTTTGC+AGG | - | chr8_1:22666036-22666055 | Msa1185460:CDS | 20.0% |
| !!! | GAAATGAAGTGGATTATTTA+TGG | + | chr8_1:22659904-22659923 | None:intergenic | 25.0% |
| ! | ACTAATTTCGTTGTTAGTAA+CGG | + | chr8_1:22659961-22659980 | None:intergenic | 25.0% |
| ! | ATGATTATGTTGAAGATGAT+CGG | - | chr8_1:22660600-22660619 | Msa1185460:intron | 25.0% |
| ! | TCAAAAGAAATACGAGTATA+CGG | + | chr8_1:22660855-22660874 | None:intergenic | 25.0% |
| ! | ATACTGTCTTTGTCTAAATT+CGG | + | chr8_1:22660933-22660952 | None:intergenic | 25.0% |
| ! | AATCGTACAATGTTGAATTA+TGG | - | chr8_1:22661149-22661168 | Msa1185460:intron | 25.0% |
| !! | TGAAATATGTTTTACACTGA+CGG | - | chr8_1:22661183-22661202 | Msa1185460:intron | 25.0% |
| ! | TGACTAGTACTTCTTAAAAA+TGG | + | chr8_1:22661242-22661261 | None:intergenic | 25.0% |
| !!! | AGAATGAAAATGTTTTTGCA+TGG | - | chr8_1:22661377-22661396 | Msa1185460:intron | 25.0% |
| ! | TTCATTGTATACAATCCTTT+GGG | + | chr8_1:22661748-22661767 | None:intergenic | 25.0% |
| ! | TTTCATTGTATACAATCCTT+TGG | + | chr8_1:22661749-22661768 | None:intergenic | 25.0% |
| ! | GTCATTAAATTGATACCATA+TGG | - | chr8_1:22661976-22661995 | Msa1185460:intron | 25.0% |
| ! | GGGTTGAAGAATTAAAAAAA+AGG | + | chr8_1:22662140-22662159 | None:intergenic | 25.0% |
| ! | GAGTAACAAAACAATATTGA+AGG | - | chr8_1:22662342-22662361 | Msa1185460:CDS | 25.0% |
| ! | TAACAAAACAATATTGAAGG+TGG | - | chr8_1:22662345-22662364 | Msa1185460:CDS | 25.0% |
| ! | CATATTTGTGGGATTAAATA+TGG | + | chr8_1:22662424-22662443 | None:intergenic | 25.0% |
| ! | AACTAAATAAAGGGAAATGT+TGG | - | chr8_1:22662537-22662556 | Msa1185460:CDS | 25.0% |
| !! | GTCAAAACAGTTTTCTTTTA+TGG | - | chr8_1:22662628-22662647 | Msa1185460:intron | 25.0% |
| ! | GTGTCCTAATAACAATAATT+AGG | - | chr8_1:22662746-22662765 | Msa1185460:intron | 25.0% |
| !! | TGACAAATTACTTCTAAGAA+AGG | + | chr8_1:22662900-22662919 | None:intergenic | 25.0% |
| !! | ATTTTGGATCAAATCTATTG+AGG | - | chr8_1:22663376-22663395 | Msa1185460:intron | 25.0% |
| ! | GAAAGAATACTGAAAATTTG+CGG | - | chr8_1:22663406-22663425 | Msa1185460:intron | 25.0% |
| ! | CATATTCACATTTGATTCAA+AGG | + | chr8_1:22663523-22663542 | None:intergenic | 25.0% |
| ! | TGATTTATTGATCCAATGAT+AGG | - | chr8_1:22663553-22663572 | Msa1185460:intron | 25.0% |
| ! | TGCATTTGTAACAATTTCTT+AGG | - | chr8_1:22663615-22663634 | Msa1185460:intron | 25.0% |
| !!! | ATTTTTGGTAGTTTCCTTAT+TGG | - | chr8_1:22663733-22663752 | Msa1185460:intron | 25.0% |
| ! | TGTGGATCATAAATAGTATT+GGG | - | chr8_1:22664080-22664099 | Msa1185460:intron | 25.0% |
| ! | ATAAGAGCTTATCATATAAG+TGG | - | chr8_1:22664262-22664281 | Msa1185460:intron | 25.0% |
| !! | ATTGTTTTCAGTAGTTATCT+AGG | - | chr8_1:22664346-22664365 | Msa1185460:intron | 25.0% |
| ! | GATTATTCGAACTTATCTAT+TGG | + | chr8_1:22664452-22664471 | None:intergenic | 25.0% |
| ! | TTCTATTCTATGTCAATCAA+AGG | + | chr8_1:22664617-22664636 | None:intergenic | 25.0% |
| ! | TTTCTTAACAAAATGGTACT+TGG | - | chr8_1:22664766-22664785 | Msa1185460:intron | 25.0% |
| ! | AACCTTTGTGTTATACATTA+CGG | - | chr8_1:22664941-22664960 | Msa1185460:intron | 25.0% |
| !!! | GCTTTAAAGTTAACTCAATA+TGG | + | chr8_1:22664968-22664987 | None:intergenic | 25.0% |
| ! | AAAAGCTAAGAAACTAGATT+TGG | + | chr8_1:22665049-22665068 | None:intergenic | 25.0% |
| ! | AATGATTTCCTGTATTTGAT+AGG | - | chr8_1:22665300-22665319 | Msa1185460:intron | 25.0% |
| !! | ACCATTTTCAATAATAGCAA+GGG | + | chr8_1:22665340-22665359 | None:intergenic | 25.0% |
| !! | TACCATTTTCAATAATAGCA+AGG | + | chr8_1:22665341-22665360 | None:intergenic | 25.0% |
| ! | TGAAAATGATAGAATTGAAG+TGG | - | chr8_1:22665908-22665927 | Msa1185460:CDS | 25.0% |
| ! | TTCTGGTAAGATATATTAAC+AGG | + | chr8_1:22666167-22666186 | None:intergenic | 25.0% |
| !!! | TATCTTACCAGAATTTTGAT+TGG | - | chr8_1:22666174-22666193 | Msa1185460:CDS | 25.0% |
| ! | TTAATGACCAATCAAAATTC+TGG | + | chr8_1:22666184-22666203 | None:intergenic | 25.0% |
| !!! | AAAAGAAGGTATTTTTAGGT+AGG | - | chr8_1:22666343-22666362 | Msa1185460:CDS | 25.0% |
| AACGAAATTAGTTACGAACA+AGG | - | chr8_1:22659969-22659988 | Msa1185460:three_prime_UTR | 30.0% | |
| ATAAATCATTGCTCCTTTGA+CGG | + | chr8_1:22660151-22660170 | None:intergenic | 30.0% | |
| TTCTCGTTGAAGAAAATCAT+CGG | + | chr8_1:22660455-22660474 | None:intergenic | 30.0% | |
| !! | TTTAGCTAAATGGAGTATTG+AGG | + | chr8_1:22660960-22660979 | None:intergenic | 30.0% |
| ACCAATTATTTAGGCAAGTT+TGG | - | chr8_1:22660979-22660998 | Msa1185460:CDS | 30.0% | |
| TCCAAACTTGCCTAAATAAT+TGG | + | chr8_1:22660983-22661002 | None:intergenic | 30.0% | |
| ATAAGCACTTATTGCGATAA+GGG | + | chr8_1:22661049-22661068 | None:intergenic | 30.0% | |
| TATAAGCACTTATTGCGATA+AGG | + | chr8_1:22661050-22661069 | None:intergenic | 30.0% | |
| TATTTGTGTTCGAAATGATG+AGG | - | chr8_1:22661484-22661503 | Msa1185460:intron | 30.0% | |
| ATTTGTGTTCGAAATGATGA+GGG | - | chr8_1:22661485-22661504 | Msa1185460:intron | 30.0% | |
| TACAAGTACTTGAACTTGAA+TGG | - | chr8_1:22661532-22661551 | Msa1185460:intron | 30.0% | |
| ACAAGTACTTGAACTTGAAT+GGG | - | chr8_1:22661533-22661552 | Msa1185460:intron | 30.0% | |
| ! | TAAACAATTGTGATTTGTCG+TGG | + | chr8_1:22661591-22661610 | None:intergenic | 30.0% |
| TTTATGAAAAAGAAAGGGGT+TGG | - | chr8_1:22661607-22661626 | Msa1185460:intron | 30.0% | |
| TTATGAAAAAGAAAGGGGTT+GGG | - | chr8_1:22661608-22661627 | Msa1185460:intron | 30.0% | |
| TCATTGTATACAATCCTTTG+GGG | + | chr8_1:22661747-22661766 | None:intergenic | 30.0% | |
| AAAATTATGTGTGGAGAAGT+GGG | - | chr8_1:22661766-22661785 | Msa1185460:intron | 30.0% | |
| CTACCAATTAGCTACATTTA+GGG | - | chr8_1:22661834-22661853 | Msa1185460:intron | 30.0% | |
| TACCAATTAGCTACATTTAG+GGG | - | chr8_1:22661835-22661854 | Msa1185460:intron | 30.0% | |
| TTAAATTGATACCATATGGG+TGG | - | chr8_1:22661980-22661999 | Msa1185460:intron | 30.0% | |
| GTTGGATAAACAGATTAAGA+AGG | - | chr8_1:22662555-22662574 | Msa1185460:CDS | 30.0% | |
| TTAACATATGCGTATTACGT+TGG | - | chr8_1:22662670-22662689 | Msa1185460:intron | 30.0% | |
| TACTTTCCTGTATGAAATAG+GGG | + | chr8_1:22663068-22663087 | None:intergenic | 30.0% | |
| CTACTTTCCTGTATGAAATA+GGG | + | chr8_1:22663069-22663088 | None:intergenic | 30.0% | |
| ACTACTTTCCTGTATGAAAT+AGG | + | chr8_1:22663070-22663089 | None:intergenic | 30.0% | |
| AAGTAAATACCGCATTATGA+CGG | - | chr8_1:22663203-22663222 | Msa1185460:intron | 30.0% | |
| AAAAACACATTGCACAAAGA+CGG | - | chr8_1:22663232-22663251 | Msa1185460:intron | 30.0% | |
| !! | AACAATTTTGAGGGAGATTT+TGG | - | chr8_1:22663360-22663379 | Msa1185460:intron | 30.0% |
| AATCATCTATTTCAACCTGA+AGG | - | chr8_1:22663430-22663449 | Msa1185460:intron | 30.0% | |
| ATTTCTTAGGCTGTTGAAAT+CGG | - | chr8_1:22663628-22663647 | Msa1185460:intron | 30.0% | |
| ! | ACTTCATCCATCATGTTTTT+GGG | - | chr8_1:22663671-22663690 | Msa1185460:intron | 30.0% |
| TTTCTTACCCAAAAACATGA+TGG | + | chr8_1:22663681-22663700 | None:intergenic | 30.0% | |
| !!! | TGAAAGTGTCACAACATTTT+TGG | - | chr8_1:22663718-22663737 | Msa1185460:intron | 30.0% |
| ACAGAAAAAAGTTGCCAATA+AGG | + | chr8_1:22663750-22663769 | None:intergenic | 30.0% | |
| !!! | TATTGGCAACTTTTTTCTGT+AGG | - | chr8_1:22663750-22663769 | Msa1185460:intron | 30.0% |
| !!! | ATTGGCAACTTTTTTCTGTA+GGG | - | chr8_1:22663751-22663770 | Msa1185460:intron | 30.0% |
| !! | AGGGAAAATGATTTTGAAGA+TGG | - | chr8_1:22663770-22663789 | Msa1185460:intron | 30.0% |
| ATACTATTTATGATCCACAC+TGG | + | chr8_1:22664079-22664098 | None:intergenic | 30.0% | |
| GTGTGGATCATAAATAGTAT+TGG | - | chr8_1:22664079-22664098 | Msa1185460:intron | 30.0% | |
| ! | ATCACATAGCTCTACATATT+AGG | + | chr8_1:22664121-22664140 | None:intergenic | 30.0% |
| CACTAACTAACATAACAGAT+AGG | + | chr8_1:22664155-22664174 | None:intergenic | 30.0% | |
| !! | AGAATTTGCTATATAAAGCC+TGG | - | chr8_1:22664206-22664225 | Msa1185460:intron | 30.0% |
| TGTCATATGTTCTTATGAAC+AGG | - | chr8_1:22664410-22664429 | Msa1185460:intron | 30.0% | |
| TCGAATAATCCAATCCAAAT+AGG | - | chr8_1:22664462-22664481 | Msa1185460:intron | 30.0% | |
| TCTTAGCATCATATTTGTGT+AGG | - | chr8_1:22664498-22664517 | Msa1185460:intron | 30.0% | |
| AGTTGTGATCTTTGATATTG+CGG | - | chr8_1:22664853-22664872 | Msa1185460:intron | 30.0% | |
| ! | GACATTTTCTTTCTAATTGC+AGG | - | chr8_1:22665118-22665137 | Msa1185460:intron | 30.0% |
| CTTGAATTTGTATAATGCCA+TGG | - | chr8_1:22665215-22665234 | Msa1185460:intron | 30.0% | |
| ATACAGGAAATCATTGAAGA+AGG | + | chr8_1:22665295-22665314 | None:intergenic | 30.0% | |
| TCAATAATAGCAAGGGAATA+AGG | + | chr8_1:22665333-22665352 | None:intergenic | 30.0% | |
| !! | TCCCTTGCTATTATTGAAAA+TGG | - | chr8_1:22665336-22665355 | Msa1185460:intron | 30.0% |
| CAACTTCAAGCTATATGATT+TGG | + | chr8_1:22665587-22665606 | None:intergenic | 30.0% | |
| AAAGTCCAAAGTGAAATAAC+GGG | + | chr8_1:22665800-22665819 | None:intergenic | 30.0% | |
| CAAAGTCCAAAGTGAAATAA+CGG | + | chr8_1:22665801-22665820 | None:intergenic | 30.0% | |
| TTTCACTTTGGACTTTGTAA+CGG | - | chr8_1:22665804-22665823 | Msa1185460:CDS | 30.0% | |
| AATTCATCTACAACTCTATG+AGG | + | chr8_1:22665864-22665883 | None:intergenic | 30.0% | |
| AGAGTTGTAGATGAATTAAG+AGG | - | chr8_1:22665867-22665886 | Msa1185460:CDS | 30.0% | |
| !!! | TTCTAGCTTTTCTTAAGCTT+TGG | - | chr8_1:22665982-22666001 | Msa1185460:CDS | 30.0% |
| !! | ATATATTTTTGCAGGTTCAG+TGG | - | chr8_1:22666044-22666063 | Msa1185460:CDS | 30.0% |
| TACTTGAAACCTAATAAAGC+TGG | - | chr8_1:22666110-22666129 | Msa1185460:CDS | 30.0% | |
| GTCATTAAATTCTTGAGTAG+TGG | - | chr8_1:22666196-22666215 | Msa1185460:CDS | 30.0% | |
| ATCACTCAAATTCTTTCCTT+TGG | + | chr8_1:22666225-22666244 | None:intergenic | 30.0% | |
| AACTGTTTGTGTTCGTTTCT+CGG | + | chr8_1:22659871-22659890 | None:intergenic | 35.0% | |
| GAAATTAGTTACGAACAAGG+AGG | - | chr8_1:22659972-22659991 | Msa1185460:three_prime_UTR | 35.0% | |
| GTGTAGATAGCAAAAACGAA+GGG | - | chr8_1:22659994-22660013 | Msa1185460:exon | 35.0% | |
| !! | TTGTTGGTTTGATAAGTCTC+CGG | + | chr8_1:22660062-22660081 | None:intergenic | 35.0% |
| ! | TTTGAAGAATTTTCTCACCG+CGG | + | chr8_1:22660342-22660361 | None:intergenic | 35.0% |
| TTCTTCAACGAGAAGCTTAT+AGG | - | chr8_1:22660461-22660480 | Msa1185460:intron | 35.0% | |
| TTGAATTCACTTCGAAACAG+CGG | - | chr8_1:22660497-22660516 | Msa1185460:intron | 35.0% | |
| ACATAATCATAACCGTACAC+AGG | + | chr8_1:22660590-22660609 | None:intergenic | 35.0% | |
| TTATGTTGAAGATGATCGGA+CGG | - | chr8_1:22660604-22660623 | Msa1185460:intron | 35.0% | |
| ! | TTGGAGTTGTTAGGGTTTTA+AGG | - | chr8_1:22660636-22660655 | Msa1185460:intron | 35.0% |
| !! | TGGAGTTGTTAGGGTTTTAA+GGG | - | chr8_1:22660637-22660656 | Msa1185460:intron | 35.0% |
| AAAGAAATACGAGTATACGG+TGG | + | chr8_1:22660852-22660871 | None:intergenic | 35.0% | |
| GTTGAATTATGGTTGCTTGA+TGG | - | chr8_1:22661160-22661179 | Msa1185460:intron | 35.0% | |
| ! | CACGTCTCGTTAAGTATTTT+TGG | + | chr8_1:22661266-22661285 | None:intergenic | 35.0% |
| CAAAAATACTTAACGAGACG+TGG | - | chr8_1:22661264-22661283 | Msa1185460:intron | 35.0% | |
| ACGAGACGTGGAAATATTAA+TGG | - | chr8_1:22661276-22661295 | Msa1185460:intron | 35.0% | |
| !! | GAAAATGTTTTTGCATGGAG+AGG | - | chr8_1:22661382-22661401 | Msa1185460:intron | 35.0% |
| TTTGTGTTCGAAATGATGAG+GGG | - | chr8_1:22661486-22661505 | Msa1185460:intron | 35.0% | |
| TATCTAACTTCTATCCCCAA+AGG | - | chr8_1:22661730-22661749 | Msa1185460:intron | 35.0% | |
| GAAAATTATGTGTGGAGAAG+TGG | - | chr8_1:22661765-22661784 | Msa1185460:intron | 35.0% | |
| AAATTATGTGTGGAGAAGTG+GGG | - | chr8_1:22661767-22661786 | Msa1185460:intron | 35.0% | |
| CTACTGGGATAATTTATGCA+AGG | + | chr8_1:22661814-22661833 | None:intergenic | 35.0% | |
| GCTACCAATTAGCTACATTT+AGG | - | chr8_1:22661833-22661852 | Msa1185460:intron | 35.0% | |
| ATCCCCTAAATGTAGCTAAT+TGG | + | chr8_1:22661840-22661859 | None:intergenic | 35.0% | |
| ! | ATGAGATTTTTCCACCCATA+TGG | + | chr8_1:22661994-22662013 | None:intergenic | 35.0% |
| GTATCACCAATTAGTTGTTG+GGG | + | chr8_1:22662160-22662179 | None:intergenic | 35.0% | |
| CGTATCACCAATTAGTTGTT+GGG | + | chr8_1:22662161-22662180 | None:intergenic | 35.0% | |
| ACGTATCACCAATTAGTTGT+TGG | + | chr8_1:22662162-22662181 | None:intergenic | 35.0% | |
| ! | AACTAATTGGTGATACGTGA+GGG | - | chr8_1:22662164-22662183 | Msa1185460:intron | 35.0% |
| !! | ACAACTTTGATGATGCTTGA+GGG | - | chr8_1:22662255-22662274 | Msa1185460:CDS | 35.0% |
| ATTCTACCCCTATTTCATAC+AGG | - | chr8_1:22663059-22663078 | Msa1185460:intron | 35.0% | |
| TGCATCTATACTCAAGTCTA+TGG | - | chr8_1:22663092-22663111 | Msa1185460:intron | 35.0% | |
| AGTAAATACCGCATTATGAC+GGG | - | chr8_1:22663204-22663223 | Msa1185460:intron | 35.0% | |
| ! | TTTGATTTCCCGTCATAATG+CGG | + | chr8_1:22663215-22663234 | None:intergenic | 35.0% |
| AGACAACATATTTGACCTTC+AGG | + | chr8_1:22663448-22663467 | None:intergenic | 35.0% | |
| AAATCGGAAAAGAGTTATCC+AGG | - | chr8_1:22663644-22663663 | Msa1185460:intron | 35.0% | |
| ! | CACTTCATCCATCATGTTTT+TGG | - | chr8_1:22663670-22663689 | Msa1185460:intron | 35.0% |
| CAAATTAAAGCTGCTGTCTT+TGG | + | chr8_1:22663878-22663897 | None:intergenic | 35.0% | |
| ! | AGAAGCATAAGACTCAAGAA+TGG | + | chr8_1:22663927-22663946 | None:intergenic | 35.0% |
| AGAAATGTATAGAACCAGTG+TGG | - | chr8_1:22664062-22664081 | Msa1185460:intron | 35.0% | |
| TGATTGATTGTAAGCGTTAG+TGG | - | chr8_1:22664173-22664192 | Msa1185460:intron | 35.0% | |
| TTAAACTGTTTATCCAGACC+AGG | + | chr8_1:22664227-22664246 | None:intergenic | 35.0% | |
| ! | TTGTGTAGGAGCATAACAAT+TGG | - | chr8_1:22664512-22664531 | Msa1185460:intron | 35.0% |
| ! | TGTGTAGGAGCATAACAATT+GGG | - | chr8_1:22664513-22664532 | Msa1185460:intron | 35.0% |
| ! | TATGTCAATCAAAGGTACAG+AGG | + | chr8_1:22664609-22664628 | None:intergenic | 35.0% |
| AATTTCAAATCGGCTGCAAT+CGG | - | chr8_1:22664724-22664743 | Msa1185460:intron | 35.0% | |
| ATTCTAGTCAGTCAATGACA+AGG | - | chr8_1:22664814-22664833 | Msa1185460:intron | 35.0% | |
| GACCGTAATGTATAACACAA+AGG | + | chr8_1:22664946-22664965 | None:intergenic | 35.0% | |
| GATGGAAAACATCGAAGAAT+GGG | + | chr8_1:22664999-22665018 | None:intergenic | 35.0% | |
| TGATGGAAAACATCGAAGAA+TGG | + | chr8_1:22665000-22665019 | None:intergenic | 35.0% | |
| !! | TAAGAAACTAGATTTGGTGG+AGG | + | chr8_1:22665043-22665062 | None:intergenic | 35.0% |
| AGCTAAGAAACTAGATTTGG+TGG | + | chr8_1:22665046-22665065 | None:intergenic | 35.0% | |
| GATTTCCTGTATTTGATAGG+AGG | - | chr8_1:22665303-22665322 | Msa1185460:intron | 35.0% | |
| GTATTCTCAGATGTAATCAG+AGG | - | chr8_1:22665358-22665377 | Msa1185460:intron | 35.0% | |
| AAGGGCTTCATTAAGGAATA+TGG | + | chr8_1:22665387-22665406 | None:intergenic | 35.0% | |
| ! | TTGAACCCGTTATTTCACTT+TGG | - | chr8_1:22665792-22665811 | Msa1185460:CDS | 35.0% |
| !! | AAGAGAAAGAAGTGCTTAAG+TGG | - | chr8_1:22666078-22666097 | Msa1185460:CDS | 35.0% |
| ACACATCTCTTGAGTGATAA+TGG | - | chr8_1:22666140-22666159 | Msa1185460:CDS | 35.0% | |
| ACTGTTTGTGTTCGTTTCTC+GGG | + | chr8_1:22659870-22659889 | None:intergenic | 40.0% | |
| TCGGGTAAAACGAAATGAAG+TGG | + | chr8_1:22659915-22659934 | None:intergenic | 40.0% | |
| TTACCCGAAAATCACGCTAA+CGG | - | chr8_1:22659927-22659946 | Msa1185460:three_prime_UTR | 40.0% | |
| GGTGTAGATAGCAAAAACGA+AGG | - | chr8_1:22659993-22660012 | Msa1185460:exon | 40.0% | |
| !!! | CGGAGTTTCGTTGTTTTTGT+TGG | + | chr8_1:22660078-22660097 | None:intergenic | 40.0% |
| GTTTCGACAATCGATTGAAG+AGG | - | chr8_1:22660199-22660218 | Msa1185460:intron | 40.0% | |
| GTGACAGAGTTCAATCTTTC+AGG | - | chr8_1:22660227-22660246 | Msa1185460:intron | 40.0% | |
| CCTTTCATCTCATCTTCTTC+AGG | + | chr8_1:22660278-22660297 | None:intergenic | 40.0% | |
| CCTGAAGAAGATGAGATGAA+AGG | - | chr8_1:22660275-22660294 | Msa1185460:CDS | 40.0% | |
| TTCAACGAGAAGCTTATAGG+AGG | - | chr8_1:22660464-22660483 | Msa1185460:intron | 40.0% | |
| TAATCATAACCGTACACAGG+CGG | + | chr8_1:22660587-22660606 | None:intergenic | 40.0% | |
| ATGAGATGGTTGGAGTTGTT+AGG | - | chr8_1:22660627-22660646 | Msa1185460:intron | 40.0% | |
| TGAGATGGTTGGAGTTGTTA+GGG | - | chr8_1:22660628-22660647 | Msa1185460:intron | 40.0% | |
| !!! | GGAGTTGTTAGGGTTTTAAG+GGG | - | chr8_1:22660638-22660657 | Msa1185460:intron | 40.0% |
| !!! | GAGTTGTTAGGGTTTTAAGG+GGG | - | chr8_1:22660639-22660658 | Msa1185460:intron | 40.0% |
| !!! | AGTTGTTAGGGTTTTAAGGG+GGG | - | chr8_1:22660640-22660659 | Msa1185460:intron | 40.0% |
| !! | ATGGCTTGTAGTTGATGAGA+AGG | - | chr8_1:22661295-22661314 | Msa1185460:intron | 40.0% |
| ! | TTTTTGCATGGAGAGGCTTT+TGG | - | chr8_1:22661389-22661408 | Msa1185460:intron | 40.0% |
| AACTTGAATGGGATTGTGTC+TGG | - | chr8_1:22661544-22661563 | Msa1185460:intron | 40.0% | |
| ! | GTAGCTAATTGGTAGCTACT+GGG | + | chr8_1:22661829-22661848 | None:intergenic | 40.0% |
| ! | TGTAGCTAATTGGTAGCTAC+TGG | + | chr8_1:22661830-22661849 | None:intergenic | 40.0% |
| TCACGTATCAACAAGTTGTG+GGG | + | chr8_1:22662083-22662102 | None:intergenic | 40.0% | |
| CTCACGTATCAACAAGTTGT+GGG | + | chr8_1:22662084-22662103 | None:intergenic | 40.0% | |
| !! | CACAACTTGTTGATACGTGA+GGG | - | chr8_1:22662083-22662102 | Msa1185460:intron | 40.0% |
| !! | ACAACTTGTTGATACGTGAG+GGG | - | chr8_1:22662084-22662103 | Msa1185460:intron | 40.0% |
| CTTCAACCCCAACAACTAAT+TGG | - | chr8_1:22662151-22662170 | Msa1185460:intron | 40.0% | |
| ! | CAACTAATTGGTGATACGTG+AGG | - | chr8_1:22662163-22662182 | Msa1185460:intron | 40.0% |
| ! | ACTAATTGGTGATACGTGAG+GGG | - | chr8_1:22662165-22662184 | Msa1185460:intron | 40.0% |
| CTCAAGCATCATCAAAGTTG+TGG | + | chr8_1:22662256-22662275 | None:intergenic | 40.0% | |
| !! | CACAACTTTGATGATGCTTG+AGG | - | chr8_1:22662254-22662273 | Msa1185460:CDS | 40.0% |
| !! | CAACTTTGATGATGCTTGAG+GGG | - | chr8_1:22662256-22662275 | Msa1185460:CDS | 40.0% |
| GTCACAATCTTGTCATGCTT+TGG | - | chr8_1:22662916-22662935 | Msa1185460:intron | 40.0% | |
| !! | TTCGTTGACTTAGCACGATT+CGG | + | chr8_1:22663272-22663291 | None:intergenic | 40.0% |
| !! | CAGCAGCTTTAATTTGTGAC+AGG | - | chr8_1:22663882-22663901 | Msa1185460:intron | 40.0% |
| AAATTCTTCGCTTCGGCTAA+TGG | + | chr8_1:22663978-22663997 | None:intergenic | 40.0% | |
| ACCTACGAAATTCTTCGCTT+CGG | + | chr8_1:22663985-22664004 | None:intergenic | 40.0% | |
| TTGCTATATAAAGCCTGGTC+TGG | - | chr8_1:22664211-22664230 | Msa1185460:intron | 40.0% | |
| GATGCTAAGACTAAGACGTA+GGG | + | chr8_1:22664488-22664507 | None:intergenic | 40.0% | |
| TGATGCTAAGACTAAGACGT+AGG | + | chr8_1:22664489-22664508 | None:intergenic | 40.0% | |
| AATAGAAAGCTACATCAGCG+TGG | - | chr8_1:22664630-22664649 | Msa1185460:intron | 40.0% | |
| ! | AAGGAACACACGGATTATCA+AGG | + | chr8_1:22664680-22664699 | None:intergenic | 40.0% |
| TGATAATCCGTGTGTTCCTT+TGG | - | chr8_1:22664680-22664699 | Msa1185460:intron | 40.0% | |
| AGGAAATCCAAAGGAACACA+CGG | + | chr8_1:22664690-22664709 | None:intergenic | 40.0% | |
| GCAGGAATAAGGAAATCCAA+AGG | + | chr8_1:22664699-22664718 | None:intergenic | 40.0% | |
| GAAATTGAGCAGCAGGAATA+AGG | + | chr8_1:22664710-22664729 | None:intergenic | 40.0% | |
| CCTGCTGCTCAATTTCAAAT+CGG | - | chr8_1:22664714-22664733 | Msa1185460:intron | 40.0% | |
| ! | TCGATGTTTTCCATCATCTG+TGG | - | chr8_1:22665004-22665023 | Msa1185460:intron | 40.0% |
| ! | ATGTTTTCCATCATCTGTGG+TGG | - | chr8_1:22665007-22665026 | Msa1185460:intron | 40.0% |
| AATGACTGCATGAATGACCA+TGG | + | chr8_1:22665235-22665254 | None:intergenic | 40.0% | |
| ATTCATGCAGTCATTAGCGT+CGG | - | chr8_1:22665240-22665259 | Msa1185460:intron | 40.0% | |
| ! | GTCCAGAAGGTGTAATTGAT+AGG | - | chr8_1:22665265-22665284 | Msa1185460:intron | 40.0% |
| CTCCTATCAATTACACCTTC+TGG | + | chr8_1:22665270-22665289 | None:intergenic | 40.0% | |
| GATGTCCTCCTATCAAATAC+AGG | + | chr8_1:22665311-22665330 | None:intergenic | 40.0% | |
| AGTGCTAAAGGGCTTCATTA+AGG | + | chr8_1:22665394-22665413 | None:intergenic | 40.0% | |
| TTAATGAAGCCCTTTAGCAC+TGG | - | chr8_1:22665393-22665412 | Msa1185460:intron | 40.0% | |
| AACCTGTTCTTACAAACTGC+AGG | - | chr8_1:22665755-22665774 | Msa1185460:CDS | 40.0% | |
| AACCTGCAGTTTGTAAGAAC+AGG | + | chr8_1:22665760-22665779 | None:intergenic | 40.0% | |
| GTCAAAAGAACCTCACGTTT+GGG | + | chr8_1:22665842-22665861 | None:intergenic | 40.0% | |
| !! | GTCACTAGACCAGCTTTATT+AGG | + | chr8_1:22666122-22666141 | None:intergenic | 40.0% |
| CGTTGTTAGTAACGGTTTCG+TGG | + | chr8_1:22659953-22659972 | None:intergenic | 45.0% | |
| ! | TTGGTTTGATAAGTCTCCGG+TGG | + | chr8_1:22660059-22660078 | None:intergenic | 45.0% |
| GAAGAATCACGTTCTTCTCG+AGG | - | chr8_1:22660297-22660316 | Msa1185460:CDS | 45.0% | |
| AAGTTGCAGAGATTGTTCCG+CGG | - | chr8_1:22660322-22660341 | Msa1185460:CDS | 45.0% | |
| AAAGAGCTACGTGATCGAAC+AGG | - | chr8_1:22660416-22660435 | Msa1185460:intron | 45.0% | |
| TGATCGAACAGGAACGGTTT+CGG | - | chr8_1:22660427-22660446 | Msa1185460:intron | 45.0% | |
| GAAACAGCGGCGAATTTGAA+CGG | - | chr8_1:22660510-22660529 | Msa1185460:intron | 45.0% | |
| CGAATTTGAACGGAGGTTGA+CGG | - | chr8_1:22660520-22660539 | Msa1185460:intron | 45.0% | |
| !!! | GTTGTTAGGGTTTTAAGGGG+GGG | - | chr8_1:22660641-22660660 | Msa1185460:intron | 45.0% |
| !! | TGTTGGTTCAGGATCGGATA+AGG | - | chr8_1:22660666-22660685 | Msa1185460:intron | 45.0% |
| AAATGATGAGGGGCTCTATG+TGG | - | chr8_1:22661496-22661515 | Msa1185460:intron | 45.0% | |
| AAAAGAAAGGGGTTGGGACT+TGG | - | chr8_1:22661614-22661633 | Msa1185460:intron | 45.0% | |
| AAAGAAAGGGGTTGGGACTT+GGG | - | chr8_1:22661615-22661634 | Msa1185460:intron | 45.0% | |
| GGAGGGGACATAGATTATGA+GGG | - | chr8_1:22661636-22661655 | Msa1185460:intron | 45.0% | |
| CACGTATCAACAAGTTGTGG+GGG | + | chr8_1:22662082-22662101 | None:intergenic | 45.0% | |
| CCTCACGTATCAACAAGTTG+TGG | + | chr8_1:22662085-22662104 | None:intergenic | 45.0% | |
| !! | CCACAACTTGTTGATACGTG+AGG | - | chr8_1:22662082-22662101 | Msa1185460:intron | 45.0% |
| ! | TTGTCATGCTTTGGCTCGTT+CGG | - | chr8_1:22662925-22662944 | Msa1185460:intron | 45.0% |
| !! | ATGATGGATGAAGTGCTTCC+TGG | + | chr8_1:22663665-22663684 | None:intergenic | 45.0% |
| ACTAAGACGTAGGGCCTATT+TGG | + | chr8_1:22664479-22664498 | None:intergenic | 45.0% | |
| ! | CCGATTTGAAATTGAGCAGC+AGG | + | chr8_1:22664717-22664736 | None:intergenic | 45.0% |
| TTCATGCAGTCATTAGCGTC+GGG | - | chr8_1:22665241-22665260 | Msa1185460:intron | 45.0% | |
| CGCTTATCTCCAGTGCTAAA+GGG | + | chr8_1:22665405-22665424 | None:intergenic | 45.0% | |
| ! | CCTTTAGCACTGGAGATAAG+CGG | - | chr8_1:22665403-22665422 | Msa1185460:intron | 45.0% |
| CAAAATCTAGCCCAAACGTG+AGG | - | chr8_1:22665829-22665848 | Msa1185460:CDS | 45.0% | |
| GGTCAAAAGAACCTCACGTT+TGG | + | chr8_1:22665843-22665862 | None:intergenic | 45.0% | |
| GATGGACAGTTCTCTTCTCT+AGG | + | chr8_1:22665935-22665954 | None:intergenic | 45.0% | |
| ! | TGCAGGTTCAGTGGTGATTT+TGG | - | chr8_1:22666053-22666072 | Msa1185460:CDS | 45.0% |
| !! | ATATTATATATAAACTATTT+AGG | + | chr8_1:22665457-22665476 | None:intergenic | 5.0% |
| ! | TGGCCGTTAGCGTGATTTTC+GGG | + | chr8_1:22659933-22659952 | None:intergenic | 50.0% |
| ! | GTGGCCGTTAGCGTGATTTT+CGG | + | chr8_1:22659934-22659953 | None:intergenic | 50.0% |
| TGATAAGTCTCCGGTGGAAC+TGG | + | chr8_1:22660053-22660072 | None:intergenic | 50.0% | |
| GCTACGTGATCGAACAGGAA+CGG | - | chr8_1:22660421-22660440 | Msa1185460:intron | 50.0% | |
| AGATGATCGGACGGATGAGA+TGG | - | chr8_1:22660613-22660632 | Msa1185460:intron | 50.0% | |
| !!! | GGTTTTAAGGGGGGGATTGT+TGG | - | chr8_1:22660649-22660668 | Msa1185460:intron | 50.0% |
| !! | GGGGATTGTTGGTTCAGGAT+CGG | - | chr8_1:22660660-22660679 | Msa1185460:intron | 50.0% |
| TGGTTCAGGATCGGATAAGG+AGG | - | chr8_1:22660669-22660688 | Msa1185460:intron | 50.0% | |
| ! | CATGGAGAGGCTTTTGGATG+TGG | - | chr8_1:22661395-22661414 | Msa1185460:intron | 50.0% |
| GAATGGGATTGTGTCTGGTC+TGG | - | chr8_1:22661549-22661568 | Msa1185460:intron | 50.0% | |
| GGGAGGGGACATAGATTATG+AGG | - | chr8_1:22661635-22661654 | Msa1185460:intron | 50.0% | |
| TAAGTGTGTGAGTCTGACCG+TGG | + | chr8_1:22662961-22662980 | None:intergenic | 50.0% | |
| CACTGCACTGCACCTATCAT+TGG | + | chr8_1:22663568-22663587 | None:intergenic | 50.0% | |
| GCCGAAGCGAAGAATTTCGT+AGG | - | chr8_1:22663981-22664000 | Msa1185460:intron | 50.0% | |
| GACGTAGGGCCTATTTGGAT+TGG | + | chr8_1:22664474-22664493 | None:intergenic | 50.0% | |
| TAGGAAGCCACCACAGATGA+TGG | + | chr8_1:22665017-22665036 | None:intergenic | 50.0% | |
| TCATCTGTGGTGGCTTCCTA+TGG | - | chr8_1:22665017-22665036 | Msa1185460:intron | 50.0% | |
| !! | CTAGATTTGGTGGAGGCCAT+AGG | + | chr8_1:22665036-22665055 | None:intergenic | 50.0% |
| CCGCTTATCTCCAGTGCTAA+AGG | + | chr8_1:22665406-22665425 | None:intergenic | 50.0% | |
| TCTTGAGTAGTGGCAGCCAA+AGG | - | chr8_1:22666206-22666225 | Msa1185460:CDS | 50.0% | |
| ! | TGGAACTGGCGTTGGGAGAA+GGG | + | chr8_1:22660039-22660058 | None:intergenic | 55.0% |
| GAAATCCGGCATGGTTCCTC+CGG | + | chr8_1:22660117-22660136 | None:intergenic | 55.0% | |
| GGAGGAACCATGCCGGATTT+CGG | - | chr8_1:22660116-22660135 | Msa1185460:CDS | 55.0% | |
| CGGATGAACGTGCCGAAATC+CGG | + | chr8_1:22660131-22660150 | None:intergenic | 55.0% | |
| TCGGCACGTTCATCCGTCAA+AGG | - | chr8_1:22660135-22660154 | Msa1185460:CDS | 55.0% | |
| ! | TCTTTCAGGTCTCAGCGTCG+TGG | - | chr8_1:22660241-22660260 | Msa1185460:intron | 55.0% |
| ACAGCGGCGAATTTGAACGG+AGG | - | chr8_1:22660513-22660532 | Msa1185460:intron | 55.0% | |
| TGAACGGAGGTTGACGGAGA+TGG | - | chr8_1:22660526-22660545 | Msa1185460:intron | 55.0% | |
| !! | ATGGTGGTGGAGGAATACGC+CGG | - | chr8_1:22660545-22660564 | Msa1185460:intron | 55.0% |
| GATCGGACGGATGAGATGGT+TGG | - | chr8_1:22660617-22660636 | Msa1185460:intron | 55.0% | |
| !! | AAGGGGGGGATTGTTGGTTC+AGG | - | chr8_1:22660655-22660674 | Msa1185460:intron | 55.0% |
| CTTCAAGTGCGCGCGTAATG+AGG | - | chr8_1:22660751-22660770 | Msa1185460:intron | 55.0% | |
| AAAGGGGTTGGGACTTGGGA+GGG | - | chr8_1:22661619-22661638 | Msa1185460:intron | 55.0% | |
| GTGTGGAGAAGTGGGGAATC+CGG | - | chr8_1:22661774-22661793 | Msa1185460:intron | 55.0% | |
| TGTGGAGAAGTGGGGAATCC+GGG | - | chr8_1:22661775-22661794 | Msa1185460:intron | 55.0% | |
| GGAATCCGGGGTTCGAACTT+CGG | - | chr8_1:22661788-22661807 | Msa1185460:intron | 55.0% | |
| ! | ATGCTTTGGCTCGTTCGGCA+CGG | - | chr8_1:22662930-22662949 | Msa1185460:intron | 55.0% |
| ATCGGCTGCAATCGGTCATC+AGG | - | chr8_1:22664732-22664751 | Msa1185460:intron | 55.0% | |
| ! | ATTAGCGTCGGGAGTCCAGA+AGG | - | chr8_1:22665252-22665271 | Msa1185460:intron | 55.0% |
| CACTGGAGATAAGCGGTCAG+AGG | - | chr8_1:22665410-22665429 | Msa1185460:intron | 55.0% | |
| AGAGAACTGTCCATCTCGCG+CGG | - | chr8_1:22665940-22665959 | Msa1185460:CDS | 55.0% | |
| ACTTGAACATCCGCGCGAGA+TGG | + | chr8_1:22665953-22665972 | None:intergenic | 55.0% | |
| ATCTCGCGCGGATGTTCAAG+TGG | - | chr8_1:22665952-22665971 | Msa1185460:CDS | 55.0% | |
| ! | GGTTCCGTGCCGTTAGCTTC+GGG | + | chr8_1:22659849-22659868 | None:intergenic | 60.0% |
| ! | GGGTTCCGTGCCGTTAGCTT+CGG | + | chr8_1:22659850-22659869 | None:intergenic | 60.0% |
| ! | GGCGTTGGGAGAAGGGAATG+AGG | + | chr8_1:22660032-22660051 | None:intergenic | 60.0% |
| ! | GTGGAACTGGCGTTGGGAGA+AGG | + | chr8_1:22660040-22660059 | None:intergenic | 60.0% |
| TCTCCCAACGCCAGTTCCAC+CGG | - | chr8_1:22660040-22660059 | Msa1185460:CDS | 60.0% | |
| TCTCCGGTGGAACTGGCGTT+GGG | + | chr8_1:22660046-22660065 | None:intergenic | 60.0% | |
| GAACGTGCCGAAATCCGGCA+TGG | + | chr8_1:22660126-22660145 | None:intergenic | 60.0% | |
| ACGGAGGTTGACGGAGATGG+TGG | - | chr8_1:22660529-22660548 | Msa1185460:intron | 60.0% | |
| ! | GAGGTTGACGGAGATGGTGG+TGG | - | chr8_1:22660532-22660551 | Msa1185460:intron | 60.0% |
| !! | GTTGACGGAGATGGTGGTGG+AGG | - | chr8_1:22660535-22660554 | Msa1185460:intron | 60.0% |
| ATACGCCGGTAACGATGCGC+CGG | - | chr8_1:22660559-22660578 | Msa1185460:intron | 60.0% | |
| TAACCGTACACAGGCGGCAC+CGG | + | chr8_1:22660581-22660600 | None:intergenic | 60.0% | |
| GAAAGGGGTTGGGACTTGGG+AGG | - | chr8_1:22661618-22661637 | Msa1185460:intron | 60.0% | |
| AAGGGGTTGGGACTTGGGAG+GGG | - | chr8_1:22661620-22661639 | Msa1185460:intron | 60.0% | |
| GTGGAGAAGTGGGGAATCCG+GGG | - | chr8_1:22661776-22661795 | Msa1185460:intron | 60.0% | |
| CAAGGCCGAAGTTCGAACCC+CGG | + | chr8_1:22661796-22661815 | None:intergenic | 60.0% | |
| CGTTCGGCACGGCATTTCCA+CGG | - | chr8_1:22662941-22662960 | Msa1185460:intron | 60.0% | |
| GGGTCCCGAAGCTAACGGCA+CGG | - | chr8_1:22659842-22659861 | Msa1185460:three_prime_UTR | 65.0% | |
| GTCTCCGGTGGAACTGGCGT+TGG | + | chr8_1:22660047-22660066 | None:intergenic | 65.0% | |
| CCGGCGACGGAGAAGCTAGT+CGG | + | chr8_1:22660098-22660117 | None:intergenic | 65.0% | |
| !! | CCGACTAGCTTCTCCGTCGC+CGG | - | chr8_1:22660095-22660114 | Msa1185460:CDS | 65.0% |
| ! | ACTAGCTTCTCCGTCGCCGG+AGG | - | chr8_1:22660098-22660117 | Msa1185460:CDS | 65.0% |
| CGGCATGGTTCCTCCGGCGA+CGG | + | chr8_1:22660111-22660130 | None:intergenic | 70.0% | |
| CGTCGCCGGAGGAACCATGC+CGG | - | chr8_1:22660109-22660128 | Msa1185460:CDS | 70.0% | |
| !! | CGGCACCGGCGCATCGTTAC+CGG | + | chr8_1:22660567-22660586 | None:intergenic | 70.0% |
| !! | GCGCCGGTGCCGCCTGTGTA+CGG | - | chr8_1:22660575-22660594 | Msa1185460:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 22659840 | 22666378 | 22659840 | ID=Msa1185460;Name=Msa1185460 |
| chr8_1 | mRNA | 22659840 | 22666378 | 22659840 | ID=Msa1185460-mRNA-1;Parent=Msa1185460;Name=Msa1185460-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.8|0.33|1|1|1|6|167|587 |
| chr8_1 | exon | 22659840 | 22660160 | 22659840 | ID=Msa1185460-mRNA-1:exon:8334;Parent=Msa1185460-mRNA-1 |
| chr8_1 | exon | 22660245 | 22660349 | 22660245 | ID=Msa1185460-mRNA-1:exon:8333;Parent=Msa1185460-mRNA-1 |
| chr8_1 | exon | 22660794 | 22661078 | 22660794 | ID=Msa1185460-mRNA-1:exon:8332;Parent=Msa1185460-mRNA-1 |
| chr8_1 | exon | 22662216 | 22662446 | 22662216 | ID=Msa1185460-mRNA-1:exon:8331;Parent=Msa1185460-mRNA-1 |
| chr8_1 | exon | 22662526 | 22662581 | 22662526 | ID=Msa1185460-mRNA-1:exon:8330;Parent=Msa1185460-mRNA-1 |
| chr8_1 | exon | 22665446 | 22666378 | 22665446 | ID=Msa1185460-mRNA-1:exon:8329;Parent=Msa1185460-mRNA-1 |
| chr8_1 | CDS | 22665446 | 22666378 | 22665446 | ID=Msa1185460-mRNA-1:cds;Parent=Msa1185460-mRNA-1 |
| chr8_1 | CDS | 22662526 | 22662581 | 22662526 | ID=Msa1185460-mRNA-1:cds;Parent=Msa1185460-mRNA-1 |
| chr8_1 | CDS | 22662216 | 22662446 | 22662216 | ID=Msa1185460-mRNA-1:cds;Parent=Msa1185460-mRNA-1 |
| chr8_1 | CDS | 22660794 | 22661078 | 22660794 | ID=Msa1185460-mRNA-1:cds;Parent=Msa1185460-mRNA-1 |
| chr8_1 | CDS | 22660245 | 22660349 | 22660245 | ID=Msa1185460-mRNA-1:cds;Parent=Msa1185460-mRNA-1 |
| chr8_1 | CDS | 22660007 | 22660160 | 22660007 | ID=Msa1185460-mRNA-1:cds;Parent=Msa1185460-mRNA-1 |
| chr8_1 | three_prime_UTR | 22659840 | 22660006 | 22659840 | ID=Msa1185460-mRNA-1:three_prime_utr;Parent=Msa1185460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
