Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283200 | G7LJ82 | 78.537 | 205 | 11 | 2 | 1 | 172 | 1 | 205 | 7.65e-105 | 308 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0625680 | Msa1283200 | 0.803477 | 3.421655e-49 | -8.615850e-47 |
| Msa0798440 | Msa1283200 | 0.803815 | 2.911171e-49 | -8.615850e-47 |
| Msa1077030 | Msa1283200 | 0.804941 | 1.696081e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283200 | MtrunA17_Chr8g0355001 | 78.537 | 205 | 11 | 2 | 1 | 172 | 1 | 205 | 1.47e-108 | 308 |
| Msa1283200 | MtrunA17_Chr1g0162791 | 43.939 | 132 | 42 | 2 | 1 | 102 | 1 | 130 | 1.12e-26 | 99.4 |
| Msa1283200 | MtrunA17_Chr8g0354991 | 35.833 | 120 | 45 | 1 | 1 | 88 | 1 | 120 | 3.47e-19 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1283200 | AT5G27990.1 | 35.079 | 191 | 71 | 7 | 15 | 173 | 15 | 184 | 7.59e-19 | 79.7 |
| Msa1283200 | AT5G27990.2 | 35.079 | 191 | 71 | 7 | 15 | 173 | 15 | 184 | 7.59e-19 | 79.7 |
Find 69 sgRNAs with CRISPR-Local
Find 288 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAGTTAGATTCGGATTT+TGG | 0.118567 | 8_3:+24716867 | None:intergenic |
| CAAACCTTGAGTTGTGTAAT+TGG | 0.187924 | 8_3:-24716658 | Msa1283200:three_prime_UTR |
| TAACCTGAGCAAATGATTTC+TGG | 0.229867 | 8_3:-24716564 | Msa1283200:three_prime_UTR |
| CCCGATCCATTGTGAGTTAG+AGG | 0.235785 | 8_3:+24716491 | None:intergenic |
| CGTTTCAGTATAGACCTTAT+AGG | 0.245849 | 8_3:+24716589 | None:intergenic |
| CCCATTAACTGCCTTGTTCA+TGG | 0.257049 | 8_3:+24716842 | None:intergenic |
| GAGAGAGAGAGTCAGAATTA+GGG | 0.289049 | 8_3:+24720191 | None:intergenic |
| GGTGGTCCTTGTAGCTTGTT+AGG | 0.297509 | 8_3:+24720117 | None:intergenic |
| CGTAATCCAGCTGCTTATTC+TGG | 0.316707 | 8_3:-24718643 | Msa1283200:CDS |
| TCCATGAACAAGGCAGTTAA+TGG | 0.322486 | 8_3:-24716843 | Msa1283200:CDS |
| CAAGCATTCACCGAAGGAAT+TGG | 0.332888 | 8_3:-24720090 | Msa1283200:CDS |
| AATAGTTTAAACAACAAAAC+AGG | 0.355003 | 8_3:+24716682 | None:intergenic |
| GTTATACAATGCAATCTATA+AGG | 0.356422 | 8_3:+24716522 | None:intergenic |
| ATGTACGGAGAATGTTTAGA+AGG | 0.404882 | 8_3:-24718703 | Msa1283200:CDS |
| CGGCGAGTTGGTGAGCTTTG+AGG | 0.405818 | 8_3:+24719998 | None:intergenic |
| CATGGAATTCAAGTTAGATT+CGG | 0.413868 | 8_3:+24716860 | None:intergenic |
| ATTCTCCGTACATAATCATT+AGG | 0.419425 | 8_3:+24718713 | None:intergenic |
| AGGAATGCATCCATCCTATA+AGG | 0.422367 | 8_3:-24716603 | Msa1283200:three_prime_UTR |
| AAACCTTGAGTTGTGTAATT+GGG | 0.424926 | 8_3:-24716657 | Msa1283200:three_prime_UTR |
| TGCTTATTCTGGTGTGCAAA+AGG | 0.442639 | 8_3:-24718632 | Msa1283200:intron |
| TTCCTTCGGTGAATGCTTGA+AGG | 0.447098 | 8_3:+24720094 | None:intergenic |
| ATTCACCGAAGGAATTGGTT+TGG | 0.452171 | 8_3:-24720085 | Msa1283200:CDS |
| TCGCCGCTGATGTCCTTGCT+TGG | 0.458421 | 8_3:-24719981 | Msa1283200:CDS |
| AATCCAGGTGAAGGAGATGA+TGG | 0.464837 | 8_3:-24716792 | Msa1283200:CDS |
| TTTCCAGAAATCATTTGCTC+AGG | 0.470846 | 8_3:+24716561 | None:intergenic |
| CCATGAACAAGGCAGTTAAT+GGG | 0.478078 | 8_3:-24716842 | Msa1283200:CDS |
| ATCATTTGATCTTTAATACA+TGG | 0.481904 | 8_3:+24716418 | None:intergenic |
| CAAAACCAAACCAATTCCTT+CGG | 0.487339 | 8_3:+24720080 | None:intergenic |
| CCTCTAACTCACAATGGATC+GGG | 0.492737 | 8_3:-24716491 | Msa1283200:three_prime_UTR |
| ACCTCTAACTCACAATGGAT+CGG | 0.501023 | 8_3:-24716492 | Msa1283200:three_prime_UTR |
| GGGTCTCAGCCGGAAAATCC+AGG | 0.517000 | 8_3:-24716822 | Msa1283200:CDS |
| ATGCTGTGCTAGATTGTGAA+TGG | 0.520448 | 8_3:-24716963 | Msa1283200:intron |
| TGCACACCAGAATAAGCAGC+TGG | 0.521274 | 8_3:+24718637 | None:intergenic |
| TCACCTGGATTATCCTCACC+TGG | 0.521450 | 8_3:+24716804 | None:intergenic |
| CATCCATCATCTCCTTCACC+TGG | 0.522549 | 8_3:+24716789 | None:intergenic |
| TCCTTCGGTGAATGCTTGAA+GGG | 0.524962 | 8_3:+24720095 | None:intergenic |
| GCCGTTGAAAATGAGTGGGC+TGG | 0.531900 | 8_3:-24720033 | Msa1283200:CDS |
| GGCAGTTAATGGGTCTCAGC+CGG | 0.532626 | 8_3:-24716832 | Msa1283200:CDS |
| CAAGGACATCAGCGGCGAGT+TGG | 0.532997 | 8_3:+24719986 | None:intergenic |
| CGGTTCGGAGCGCCGACCAA+CGG | 0.534881 | 8_3:+24720055 | None:intergenic |
| TAACCCAATTACACAACTCA+AGG | 0.551194 | 8_3:+24716654 | None:intergenic |
| TGGATTGAGTGAACCAAGCA+AGG | 0.551697 | 8_3:+24719968 | None:intergenic |
| TGCTAGATTGTGAATGGCAA+TGG | 0.553024 | 8_3:-24716957 | Msa1283200:intron |
| AATCCAGGTGAGGATAATCC+AGG | 0.559977 | 8_3:-24716807 | Msa1283200:CDS |
| GGACGATAATTCAGCAAACA+TGG | 0.569749 | 8_3:-24716901 | Msa1283200:CDS |
| GAAGACCTAATGATTATGTA+CGG | 0.576974 | 8_3:-24718718 | Msa1283200:CDS |
| TCGGTGAATGCTTGAAGGGG+TGG | 0.580683 | 8_3:+24720099 | None:intergenic |
| TAATTCAGCAAACATGGATG+TGG | 0.582482 | 8_3:-24716895 | Msa1283200:CDS |
| GCTTGGTTCACTCAATCCAA+AGG | 0.593121 | 8_3:-24719964 | Msa1283200:intron |
| TCAGTATAGACCTTATAGGA+TGG | 0.599087 | 8_3:+24716593 | None:intergenic |
| AGAAAACCTCTAACTCACAA+TGG | 0.604650 | 8_3:-24716497 | Msa1283200:three_prime_UTR |
| ATGGATGGTCTGTTGTCTCA+AGG | 0.606611 | 8_3:-24716773 | Msa1283200:CDS |
| GAACCGCCGTTGAAAATGAG+TGG | 0.611433 | 8_3:-24720038 | Msa1283200:CDS |
| GGTGAGGATAATCCAGGTGA+AGG | 0.612481 | 8_3:-24716801 | Msa1283200:CDS |
| AACCGCCGTTGAAAATGAGT+GGG | 0.615075 | 8_3:-24720037 | Msa1283200:CDS |
| CAGGTGAAGGAGATGATGGA+TGG | 0.615703 | 8_3:-24716788 | Msa1283200:CDS |
| AGGGTTTATGAATTTCGAGA+AGG | 0.618914 | 8_3:+24720210 | None:intergenic |
| ACGAATCCTAACAAGCTACA+AGG | 0.631057 | 8_3:-24720123 | Msa1283200:CDS |
| CCTTCGGTGAATGCTTGAAG+GGG | 0.635643 | 8_3:+24720096 | None:intergenic |
| TAACTTGAATTCCATGAACA+AGG | 0.636334 | 8_3:-24716853 | Msa1283200:CDS |
| CCCCTTCAAGCATTCACCGA+AGG | 0.638533 | 8_3:-24720096 | Msa1283200:CDS |
| CTGTGAGCTTAATTACAGCA+CGG | 0.661803 | 8_3:+24716465 | None:intergenic |
| ATAGTTTAAACAACAAAACA+GGG | 0.664349 | 8_3:+24716683 | None:intergenic |
| GAACCAAGCAAGGACATCAG+CGG | 0.665981 | 8_3:+24719978 | None:intergenic |
| TTGTGTAATTGGGTTATATG+CGG | 0.679405 | 8_3:-24716647 | Msa1283200:three_prime_UTR |
| TCAGCCGGAAAATCCAGGTG+AGG | 0.693925 | 8_3:-24716817 | Msa1283200:CDS |
| GATGGTCTGTTGTCTCAAGG+AGG | 0.721375 | 8_3:-24716770 | Msa1283200:CDS |
| TAGTTTAAACAACAAAACAG+GGG | 0.753209 | 8_3:+24716684 | None:intergenic |
| TGATTCTGATGATAACACTG+AGG | 0.835231 | 8_3:-24716922 | Msa1283200:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAAATTATGTATTTGTTTT+TGG | - | chr8_3:24716909-24716928 | Msa1283200:CDS | 10.0% |
| !! | ATATAAAACTATTAGAATTT+GGG | - | chr8_3:24717122-24717141 | Msa1283200:intron | 10.0% |
| !!! | TATGATATTATTATTTTGTT+TGG | - | chr8_3:24719053-24719072 | Msa1283200:intron | 10.0% |
| !!! | CTTTTTGTTTATTTATTTAA+AGG | - | chr8_3:24720009-24720028 | Msa1283200:CDS | 10.0% |
| !! | GATATAAAACTATTAGAATT+TGG | - | chr8_3:24717121-24717140 | Msa1283200:intron | 15.0% |
| !!! | ATATGTTAATTTAGCATTTT+TGG | - | chr8_3:24719565-24719584 | Msa1283200:intron | 15.0% |
| !! | CAGTACAAAATTAAAAAGAT+CGG | - | chr8_3:24716391-24716410 | Msa1283200:three_prime_UTR | 20.0% |
| !! | GCTTAAACAATTAAAAAAAC+AGG | + | chr8_3:24716716-24716735 | None:intergenic | 20.0% |
| !!! | TTTTTGGAATATTACTTTAC+TGG | - | chr8_3:24716925-24716944 | Msa1283200:CDS | 20.0% |
| !! | GATTTAAACTGTGAATAATT+TGG | - | chr8_3:24716973-24716992 | Msa1283200:intron | 20.0% |
| !! | AATTTGGAAATTAGTCAAAT+GGG | - | chr8_3:24717463-24717482 | Msa1283200:intron | 20.0% |
| !!! | TTGCAATTTTAACATGTTTA+GGG | + | chr8_3:24717536-24717555 | None:intergenic | 20.0% |
| !!! | TTTGCAATTTTAACATGTTT+AGG | + | chr8_3:24717537-24717556 | None:intergenic | 20.0% |
| !!! | CTCTTTTGTTAGTAATTTTA+GGG | - | chr8_3:24717571-24717590 | Msa1283200:intron | 20.0% |
| !!! | TCTTTTGTTAGTAATTTTAG+GGG | - | chr8_3:24717572-24717591 | Msa1283200:intron | 20.0% |
| !! | ATTTGCAATATCAAATTTGT+AGG | - | chr8_3:24718074-24718093 | Msa1283200:intron | 20.0% |
| !! | TTTGCAATATCAAATTTGTA+GGG | - | chr8_3:24718075-24718094 | Msa1283200:intron | 20.0% |
| !!! | GTTTAAAATTATGTTGACAA+AGG | + | chr8_3:24718620-24718639 | None:intergenic | 20.0% |
| !!! | TTGATCATTTCTTTTTAACA+CGG | + | chr8_3:24718969-24718988 | None:intergenic | 20.0% |
| !! | AAAAAGAAATGATCAACTTT+AGG | - | chr8_3:24718973-24718992 | Msa1283200:intron | 20.0% |
| !! | AAAAGAAATGATCAACTTTA+GGG | - | chr8_3:24718974-24718993 | Msa1283200:intron | 20.0% |
| !!! | TATTATTTTGTTTGGCTTTT+TGG | - | chr8_3:24719061-24719080 | Msa1283200:intron | 20.0% |
| !! | CAGGAATTAAAAAGAAATAA+TGG | + | chr8_3:24719316-24719335 | None:intergenic | 20.0% |
| !!! | CATTATTTCTTTTTAATTCC+TGG | - | chr8_3:24719314-24719333 | Msa1283200:intron | 20.0% |
| !! | CAATTACACAATGTTATATT+AGG | + | chr8_3:24719416-24719435 | None:intergenic | 20.0% |
| !!! | AATTTAGCATTTTTGGTTTA+TGG | - | chr8_3:24719572-24719591 | Msa1283200:intron | 20.0% |
| !! | ATAGTTTAAACAACAAAACA+GGG | + | chr8_3:24719952-24719971 | None:intergenic | 20.0% |
| !! | AATAGTTTAAACAACAAAAC+AGG | + | chr8_3:24719953-24719972 | None:intergenic | 20.0% |
| !! | ATCATTTGATCTTTAATACA+TGG | + | chr8_3:24720217-24720236 | None:intergenic | 20.0% |
| ! | GTGATTAATTACAATACCTT+TGG | + | chr8_3:24716687-24716706 | None:intergenic | 25.0% |
| !! | ATTTTATAAGAGCAACACTT+TGG | + | chr8_3:24717030-24717049 | None:intergenic | 25.0% |
| !! | GTGTTGCTCTTATAAAATTA+CGG | - | chr8_3:24717032-24717051 | Msa1283200:intron | 25.0% |
| ! | AAAACTATTAGAATTTGGGT+TGG | - | chr8_3:24717126-24717145 | Msa1283200:intron | 25.0% |
| !! | AAACTATTAGAATTTGGGTT+GGG | - | chr8_3:24717127-24717146 | Msa1283200:intron | 25.0% |
| ! | CTAATTCAACCTTATAAAAC+CGG | - | chr8_3:24717151-24717170 | Msa1283200:intron | 25.0% |
| !! | TATGATACCATATAGCATTT+TGG | - | chr8_3:24717350-24717369 | Msa1283200:intron | 25.0% |
| !!! | TAAACAAAAGCATTGATGTT+TGG | - | chr8_3:24717405-24717424 | Msa1283200:intron | 25.0% |
| !! | CCAAATTGTTATTAGAAGAA+GGG | + | chr8_3:24717450-24717469 | None:intergenic | 25.0% |
| !! | TCCAAATTGTTATTAGAAGA+AGG | + | chr8_3:24717451-24717470 | None:intergenic | 25.0% |
| ! | CAATTTGGAAATTAGTCAAA+TGG | - | chr8_3:24717462-24717481 | Msa1283200:intron | 25.0% |
| ! | CCTAAAATTACTAACAAAAG+AGG | + | chr8_3:24717573-24717592 | None:intergenic | 25.0% |
| !! | CCTCTTTTGTTAGTAATTTT+AGG | - | chr8_3:24717570-24717589 | Msa1283200:intron | 25.0% |
| ! | ATTTCTCTGCATTAGAAATT+AGG | - | chr8_3:24718434-24718453 | Msa1283200:intron | 25.0% |
| ! | AAACAATTTCTCATCATTAG+AGG | + | chr8_3:24718564-24718583 | None:intergenic | 25.0% |
| ! | TCTAATGATGAGAAATTGTT+TGG | - | chr8_3:24718563-24718582 | Msa1283200:intron | 25.0% |
| !! | GGATATTTAGGTTTATATAG+AGG | - | chr8_3:24719082-24719101 | Msa1283200:intron | 25.0% |
| !!! | AGGATATTTCAGGTTTTATT+AGG | - | chr8_3:24719183-24719202 | Msa1283200:intron | 25.0% |
| ! | AAATAATGGCTTAAAAACTG+GGG | + | chr8_3:24719302-24719321 | None:intergenic | 25.0% |
| ! | GAAATAATGGCTTAAAAACT+GGG | + | chr8_3:24719303-24719322 | None:intergenic | 25.0% |
| ! | AGAAATAATGGCTTAAAAAC+TGG | + | chr8_3:24719304-24719323 | None:intergenic | 25.0% |
| ! | ACATCAAACCATTAATTAGA+TGG | - | chr8_3:24719372-24719391 | Msa1283200:intron | 25.0% |
| ! | GAACATTTCCATCTAATTAA+TGG | + | chr8_3:24719383-24719402 | None:intergenic | 25.0% |
| ! | TTGTGTAATTGTAACTTTGA+TGG | - | chr8_3:24719425-24719444 | Msa1283200:intron | 25.0% |
| ! | TAGTTTAAACAACAAAACAG+GGG | + | chr8_3:24719951-24719970 | None:intergenic | 25.0% |
| ! | GTTATACAATGCAATCTATA+AGG | + | chr8_3:24720113-24720132 | None:intergenic | 25.0% |
| ! | CTTGATAGAGTAAGTTTTCA+AGG | + | chr8_3:24716821-24716840 | None:intergenic | 30.0% |
| CTTGAAAACTTACTCTATCA+AGG | - | chr8_3:24716819-24716838 | Msa1283200:CDS | 30.0% | |
| AAAACTTACTCTATCAAGGA+GGG | - | chr8_3:24716823-24716842 | Msa1283200:CDS | 30.0% | |
| GTCAATATAGTGATTGAAGA+TGG | - | chr8_3:24716852-24716871 | Msa1283200:CDS | 30.0% | |
| TATCACTATAACTGCAATTG+AGG | + | chr8_3:24717105-24717124 | None:intergenic | 30.0% | |
| !! | CGGTTTTATAAGGTTGAATT+AGG | + | chr8_3:24717153-24717172 | None:intergenic | 30.0% |
| CCTGAACAATTGTTTATAAG+TGG | + | chr8_3:24717208-24717227 | None:intergenic | 30.0% | |
| CCACTTATAAACAATTGTTC+AGG | - | chr8_3:24717205-24717224 | Msa1283200:intron | 30.0% | |
| !! | ATACCATATAGCATTTTGGT+TGG | - | chr8_3:24717354-24717373 | Msa1283200:intron | 30.0% |
| !!! | TACCATATAGCATTTTGGTT+GGG | - | chr8_3:24717355-24717374 | Msa1283200:intron | 30.0% |
| CCCTTCTTCTAATAACAATT+TGG | - | chr8_3:24717447-24717466 | Msa1283200:intron | 30.0% | |
| AACACATTCAAGGACTAAAT+TGG | - | chr8_3:24717614-24717633 | Msa1283200:intron | 30.0% | |
| CACAAATTCTATTTGACCAA+GGG | + | chr8_3:24717780-24717799 | None:intergenic | 30.0% | |
| GTACATGTTTGTGATAATAC+AGG | - | chr8_3:24717886-24717905 | Msa1283200:intron | 30.0% | |
| GAAGACCTAATGATTATGTA+CGG | - | chr8_3:24717914-24717933 | Msa1283200:intron | 30.0% | |
| ATTCTCCGTACATAATCATT+AGG | + | chr8_3:24717922-24717941 | None:intergenic | 30.0% | |
| AAATTAAGGCACAATGCATT+TGG | - | chr8_3:24718024-24718043 | Msa1283200:intron | 30.0% | |
| ! | GGTATGTGTTTGATTGATTT+AGG | - | chr8_3:24718096-24718115 | Msa1283200:intron | 30.0% |
| GGATTTCAATTTCTACATGA+TGG | - | chr8_3:24718117-24718136 | Msa1283200:intron | 30.0% | |
| ! | TCTACATGATGGCATATTTT+AGG | - | chr8_3:24718128-24718147 | Msa1283200:intron | 30.0% |
| ACACACACACACAAATTTAT+TGG | - | chr8_3:24718371-24718390 | Msa1283200:intron | 30.0% | |
| !!! | GTTTGGCTTTTTGGATATTT+AGG | - | chr8_3:24719070-24719089 | Msa1283200:intron | 30.0% |
| TCTTGACAGCAAAAATTTAG+AGG | - | chr8_3:24719105-24719124 | Msa1283200:intron | 30.0% | |
| ! | AGTATTTGAGTTTGAGTTTC+CGG | - | chr8_3:24719145-24719164 | Msa1283200:intron | 30.0% |
| CTGAAATATCCTTTAAGCAA+GGG | + | chr8_3:24719175-24719194 | None:intergenic | 30.0% | |
| !!! | TATTTCAGGTTTTATTAGGC+CGG | - | chr8_3:24719187-24719206 | Msa1283200:intron | 30.0% |
| ATTAATGGTTTGATGTAAGC+TGG | + | chr8_3:24719368-24719387 | None:intergenic | 30.0% | |
| ! | CAAGTATTTTCCTACAAGTT+GGG | + | chr8_3:24719465-24719484 | None:intergenic | 30.0% |
| !! | TTCAAGTTAGATTCGGATTT+TGG | + | chr8_3:24719768-24719787 | None:intergenic | 30.0% |
| ! | CATGGAATTCAAGTTAGATT+CGG | + | chr8_3:24719775-24719794 | None:intergenic | 30.0% |
| TAACTTGAATTCCATGAACA+AGG | - | chr8_3:24719779-24719798 | Msa1283200:intron | 30.0% | |
| ! | AAACCTTGAGTTGTGTAATT+GGG | - | chr8_3:24719975-24719994 | Msa1283200:CDS | 30.0% |
| TTGTGTAATTGGGTTATATG+CGG | - | chr8_3:24719985-24720004 | Msa1283200:CDS | 30.0% | |
| AGGGTTTATGAATTTCGAGA+AGG | + | chr8_3:24716425-24716444 | None:intergenic | 35.0% | |
| CAAAACCAAACCAATTCCTT+CGG | + | chr8_3:24716555-24716574 | None:intergenic | 35.0% | |
| ! | TATAAAGCGTTTCTGTGAAG+AGG | + | chr8_3:24716791-24716810 | None:intergenic | 35.0% |
| GAAAACTTACTCTATCAAGG+AGG | - | chr8_3:24716822-24716841 | Msa1283200:CDS | 35.0% | |
| TGCAATTGAGGAAACATTTG+TGG | + | chr8_3:24717093-24717112 | None:intergenic | 35.0% | |
| !! | CCTTACATTCCGGTTTTATA+AGG | + | chr8_3:24717163-24717182 | None:intergenic | 35.0% |
| CCTTATAAAACCGGAATGTA+AGG | - | chr8_3:24717160-24717179 | Msa1283200:intron | 35.0% | |
| !! | CACTTCTAGGACTAGATATT+TGG | - | chr8_3:24717275-24717294 | Msa1283200:intron | 35.0% |
| ! | TATTTGGAGCATGATCTGAA+TGG | - | chr8_3:24717291-24717310 | Msa1283200:intron | 35.0% |
| TGTTTATGAGTCCCTTTGTA+AGG | + | chr8_3:24717391-24717410 | None:intergenic | 35.0% | |
| AGGGTCAATGATCTCAATTT+AGG | + | chr8_3:24717431-24717450 | None:intergenic | 35.0% | |
| GTTTAGGGACTATATTGACA+GGG | + | chr8_3:24717521-24717540 | None:intergenic | 35.0% | |
| TGTTTAGGGACTATATTGAC+AGG | + | chr8_3:24717522-24717541 | None:intergenic | 35.0% | |
| !! | TACTAACAAAAGAGGCACTA+GGG | + | chr8_3:24717565-24717584 | None:intergenic | 35.0% |
| !! | TTACTAACAAAAGAGGCACT+AGG | + | chr8_3:24717566-24717585 | None:intergenic | 35.0% |
| ! | TCCTTGAATGTGTTTTTCCT+CGG | + | chr8_3:24717608-24717627 | None:intergenic | 35.0% |
| ! | TTTGCCATTTCGATTCATTC+AGG | - | chr8_3:24717706-24717725 | Msa1283200:intron | 35.0% |
| !! | AGTGTAACTTGCTGTCATAT+TGG | + | chr8_3:24717733-24717752 | None:intergenic | 35.0% |
| TGACAGCAAGTTACACTTAT+AGG | - | chr8_3:24717736-24717755 | Msa1283200:intron | 35.0% | |
| GACAGCAAGTTACACTTATA+GGG | - | chr8_3:24717737-24717756 | Msa1283200:intron | 35.0% | |
| GCACAAATTCTATTTGACCA+AGG | + | chr8_3:24717781-24717800 | None:intergenic | 35.0% | |
| ATGTACGGAGAATGTTTAGA+AGG | - | chr8_3:24717929-24717948 | Msa1283200:intron | 35.0% | |
| GGTGTGCAAAAGGTAAATTA+AGG | - | chr8_3:24718010-24718029 | Msa1283200:intron | 35.0% | |
| !! | ACATGATGGCATATTTTAGG+AGG | - | chr8_3:24718131-24718150 | Msa1283200:intron | 35.0% |
| !! | GACACAAACTCTAGTCTTAT+TGG | - | chr8_3:24718258-24718277 | Msa1283200:intron | 35.0% |
| GCATAAACTCACAAAAAGCA+CGG | + | chr8_3:24718469-24718488 | None:intergenic | 35.0% | |
| !! | TGTTTTTGTCAGTGAAAGCA+AGG | + | chr8_3:24718494-24718513 | None:intergenic | 35.0% |
| CAACAGCTAATGGAGATATT+TGG | + | chr8_3:24718825-24718844 | None:intergenic | 35.0% | |
| GCTAATGTATCAACAGCTAA+TGG | + | chr8_3:24718835-24718854 | None:intergenic | 35.0% | |
| GTTGATACATTAGCTGTTGA+CGG | - | chr8_3:24718841-24718860 | Msa1283200:intron | 35.0% | |
| ! | TGACAGTGGTATTGAAGAAT+CGG | - | chr8_3:24718885-24718904 | Msa1283200:intron | 35.0% |
| CCTGAAATATCCTTTAAGCA+AGG | + | chr8_3:24719176-24719195 | None:intergenic | 35.0% | |
| CCTTGCTTAAAGGATATTTC+AGG | - | chr8_3:24719173-24719192 | Msa1283200:intron | 35.0% | |
| !!! | ATTTCAGGTTTTATTAGGCC+GGG | - | chr8_3:24719188-24719207 | Msa1283200:intron | 35.0% |
| TTCTGAGTACTTCTCTTGAA+AGG | + | chr8_3:24719226-24719245 | None:intergenic | 35.0% | |
| TTAAAAACTGGGGAGAATGT+AGG | + | chr8_3:24719292-24719311 | None:intergenic | 35.0% | |
| ! | ATGTAAGCTGGTTTATTGAG+GGG | + | chr8_3:24719356-24719375 | None:intergenic | 35.0% |
| ! | GATGTAAGCTGGTTTATTGA+GGG | + | chr8_3:24719357-24719376 | None:intergenic | 35.0% |
| ! | TGATGTAAGCTGGTTTATTG+AGG | + | chr8_3:24719358-24719377 | None:intergenic | 35.0% |
| ! | CCAAGTATTTTCCTACAAGT+TGG | + | chr8_3:24719466-24719485 | None:intergenic | 35.0% |
| CCAACTTGTAGGAAAATACT+TGG | - | chr8_3:24719463-24719482 | Msa1283200:intron | 35.0% | |
| GTCAGGAAATCAACTACAAT+AGG | + | chr8_3:24719510-24719529 | None:intergenic | 35.0% | |
| ACTCATGACATGTGTAATCA+AGG | + | chr8_3:24719610-24719629 | None:intergenic | 35.0% | |
| TGATTCTGATGATAACACTG+AGG | - | chr8_3:24719710-24719729 | Msa1283200:intron | 35.0% | |
| TAATTCAGCAAACATGGATG+TGG | - | chr8_3:24719737-24719756 | Msa1283200:intron | 35.0% | |
| TGTCTCAAGGAGGAAAAATA+AGG | - | chr8_3:24719872-24719891 | Msa1283200:intron | 35.0% | |
| GTCTCAAGGAGGAAAAATAA+GGG | - | chr8_3:24719873-24719892 | Msa1283200:intron | 35.0% | |
| ! | CAAACCTTGAGTTGTGTAAT+TGG | - | chr8_3:24719974-24719993 | Msa1283200:CDS | 35.0% |
| TAACCCAATTACACAACTCA+AGG | + | chr8_3:24719981-24720000 | None:intergenic | 35.0% | |
| TCAGTATAGACCTTATAGGA+TGG | + | chr8_3:24720042-24720061 | None:intergenic | 35.0% | |
| CGTTTCAGTATAGACCTTAT+AGG | + | chr8_3:24720046-24720065 | None:intergenic | 35.0% | |
| TAACCTGAGCAAATGATTTC+TGG | - | chr8_3:24720068-24720087 | Msa1283200:CDS | 35.0% | |
| TTTCCAGAAATCATTTGCTC+AGG | + | chr8_3:24720074-24720093 | None:intergenic | 35.0% | |
| AGAAAACCTCTAACTCACAA+TGG | - | chr8_3:24720135-24720154 | Msa1283200:exon | 35.0% | |
| GAGAGAGAGAGTCAGAATTA+GGG | + | chr8_3:24716444-24716463 | None:intergenic | 40.0% | |
| AGAGAGAGAGAGTCAGAATT+AGG | + | chr8_3:24716445-24716464 | None:intergenic | 40.0% | |
| ACGAATCCTAACAAGCTACA+AGG | - | chr8_3:24716509-24716528 | Msa1283200:three_prime_UTR | 40.0% | |
| ATTCACCGAAGGAATTGGTT+TGG | - | chr8_3:24716547-24716566 | Msa1283200:three_prime_UTR | 40.0% | |
| !!! | TTGGTTTGGTTTTGAACCGT+TGG | - | chr8_3:24716561-24716580 | Msa1283200:three_prime_UTR | 40.0% |
| !!! | TTTGGTTTTGAACCGTTGGT+CGG | - | chr8_3:24716565-24716584 | Msa1283200:three_prime_UTR | 40.0% |
| TAAAACCGGAATGTAAGGTG+AGG | - | chr8_3:24717165-24717184 | Msa1283200:intron | 40.0% | |
| TTGTTTATAAGTGGCCGAGT+GGG | + | chr8_3:24717199-24717218 | None:intergenic | 40.0% | |
| ATTGTTTATAAGTGGCCGAG+TGG | + | chr8_3:24717200-24717219 | None:intergenic | 40.0% | |
| TAAGAGTCCCACATTTGAAG+TGG | + | chr8_3:24717236-24717255 | None:intergenic | 40.0% | |
| TAGCCTATTCAAGATCCGTT+GGG | + | chr8_3:24717332-24717351 | None:intergenic | 40.0% | |
| ATAGCCTATTCAAGATCCGT+TGG | + | chr8_3:24717333-24717352 | None:intergenic | 40.0% | |
| GCCTAACTCATCCTTACAAA+GGG | - | chr8_3:24717377-24717396 | Msa1283200:intron | 40.0% | |
| TCCCTTTGTAAGGATGAGTT+AGG | + | chr8_3:24717381-24717400 | None:intergenic | 40.0% | |
| ACCGAGGAAAAACACATTCA+AGG | - | chr8_3:24717604-24717623 | Msa1283200:intron | 40.0% | |
| TGGTCCTGAATGAATCGAAA+TGG | + | chr8_3:24717713-24717732 | None:intergenic | 40.0% | |
| ! | CCAAGGGAAAATCACTGTTT+TGG | + | chr8_3:24717764-24717783 | None:intergenic | 40.0% |
| ! | CCAAAACAGTGATTTTCCCT+TGG | - | chr8_3:24717761-24717780 | Msa1283200:intron | 40.0% |
| TGCTTATTCTGGTGTGCAAA+AGG | - | chr8_3:24718000-24718019 | Msa1283200:intron | 40.0% | |
| AAGGCACAATGCATTTGGAA+TGG | - | chr8_3:24718029-24718048 | Msa1283200:intron | 40.0% | |
| ! | GTCTTATTGGCATCCTTTGT+TGG | - | chr8_3:24718271-24718290 | Msa1283200:intron | 40.0% |
| TATCTAGCGTACTCCAACAA+AGG | + | chr8_3:24718287-24718306 | None:intergenic | 40.0% | |
| AGGTGTGAAGGAATATCAGA+GGG | + | chr8_3:24718677-24718696 | None:intergenic | 40.0% | |
| TAATCAACAGCGTTCAATCC+CGG | + | chr8_3:24719011-24719030 | None:intergenic | 40.0% | |
| !! | TAGAGGCTTTTGATGACTCA+CGG | - | chr8_3:24719122-24719141 | Msa1283200:intron | 40.0% |
| !! | TATTTTCCTACAAGTTGGGC+TGG | + | chr8_3:24719461-24719480 | None:intergenic | 40.0% |
| ! | CTGTCATTTAGTCTCATGTC+AGG | + | chr8_3:24719527-24719546 | None:intergenic | 40.0% |
| ATGCTGTGCTAGATTGTGAA+TGG | - | chr8_3:24719669-24719688 | Msa1283200:intron | 40.0% | |
| TGCTAGATTGTGAATGGCAA+TGG | - | chr8_3:24719675-24719694 | Msa1283200:intron | 40.0% | |
| GGACGATAATTCAGCAAACA+TGG | - | chr8_3:24719731-24719750 | Msa1283200:intron | 40.0% | |
| TCCATGAACAAGGCAGTTAA+TGG | - | chr8_3:24719789-24719808 | Msa1283200:intron | 40.0% | |
| CCATGAACAAGGCAGTTAAT+GGG | - | chr8_3:24719790-24719809 | Msa1283200:intron | 40.0% | |
| ! | TTATCCTCACCTGGATTTTC+CGG | + | chr8_3:24719822-24719841 | None:intergenic | 40.0% |
| AGGAATGCATCCATCCTATA+AGG | - | chr8_3:24720029-24720048 | Msa1283200:CDS | 40.0% | |
| ACCTCTAACTCACAATGGAT+CGG | - | chr8_3:24720140-24720159 | Msa1283200:exon | 40.0% | |
| CTGTGAGCTTAATTACAGCA+CGG | + | chr8_3:24720170-24720189 | None:intergenic | 40.0% | |
| TCCTTCGGTGAATGCTTGAA+GGG | + | chr8_3:24716540-24716559 | None:intergenic | 45.0% | |
| TTCCTTCGGTGAATGCTTGA+AGG | + | chr8_3:24716541-24716560 | None:intergenic | 45.0% | |
| CAAGCATTCACCGAAGGAAT+TGG | - | chr8_3:24716542-24716561 | Msa1283200:three_prime_UTR | 45.0% | |
| ! | ACTCATTTTCAACGGCGGTT+CGG | + | chr8_3:24716595-24716614 | None:intergenic | 45.0% |
| AACCGCCGTTGAAAATGAGT+GGG | - | chr8_3:24716595-24716614 | Msa1283200:three_prime_UTR | 45.0% | |
| ! | TCCAGCCCACTCATTTTCAA+CGG | + | chr8_3:24716603-24716622 | None:intergenic | 45.0% |
| TGGATTGAGTGAACCAAGCA+AGG | + | chr8_3:24716667-24716686 | None:intergenic | 45.0% | |
| GCTTGGTTCACTCAATCCAA+AGG | - | chr8_3:24716668-24716687 | Msa1283200:three_prime_UTR | 45.0% | |
| ! | TGAAGATGGTAGCGATGAAC+AGG | - | chr8_3:24716866-24716885 | Msa1283200:CDS | 45.0% |
| ACAGTCCTCACCTTACATTC+CGG | + | chr8_3:24717173-24717192 | None:intergenic | 45.0% | |
| TGTTTATAAGTGGCCGAGTG+GGG | + | chr8_3:24717198-24717217 | None:intergenic | 45.0% | |
| AGGCCATACCACTTCAAATG+TGG | - | chr8_3:24717225-24717244 | Msa1283200:intron | 45.0% | |
| GGCCATACCACTTCAAATGT+GGG | - | chr8_3:24717226-24717245 | Msa1283200:intron | 45.0% | |
| ! | GTCCCACATTTGAAGTGGTA+TGG | + | chr8_3:24717231-24717250 | None:intergenic | 45.0% |
| ! | TCCTAGAAGTGACTTGTGAG+GGG | + | chr8_3:24717266-24717285 | None:intergenic | 45.0% |
| ! | GTCCTAGAAGTGACTTGTGA+GGG | + | chr8_3:24717267-24717286 | None:intergenic | 45.0% |
| ! | AGTCCTAGAAGTGACTTGTG+AGG | + | chr8_3:24717268-24717287 | None:intergenic | 45.0% |
| TTGCCCAACGGATCTTGAAT+AGG | - | chr8_3:24717326-24717345 | Msa1283200:intron | 45.0% | |
| GGCCCAACCAAAATGCTATA+TGG | + | chr8_3:24717360-24717379 | None:intergenic | 45.0% | |
| GGCCTAACTCATCCTTACAA+AGG | - | chr8_3:24717376-24717395 | Msa1283200:intron | 45.0% | |
| TTAGGGGACTAAATTGACCG+AGG | - | chr8_3:24717588-24717607 | Msa1283200:intron | 45.0% | |
| CGTAATCCAGCTGCTTATTC+TGG | - | chr8_3:24717989-24718008 | Msa1283200:intron | 45.0% | |
| CGCAAGTCTAAGTTTCAGAG+AGG | - | chr8_3:24718590-24718609 | Msa1283200:intron | 45.0% | |
| AGCTGGTAGGAAATGGTACA+GGG | + | chr8_3:24718652-24718671 | None:intergenic | 45.0% | |
| AAGCTGGTAGGAAATGGTAC+AGG | + | chr8_3:24718653-24718672 | None:intergenic | 45.0% | |
| ATATCAGAGGGAAAGCTGGT+AGG | + | chr8_3:24718665-24718684 | None:intergenic | 45.0% | |
| AGGAATATCAGAGGGAAAGC+TGG | + | chr8_3:24718669-24718688 | None:intergenic | 45.0% | |
| GAGGTGTGAAGGAATATCAG+AGG | + | chr8_3:24718678-24718697 | None:intergenic | 45.0% | |
| GTCAGTTAGACGCATAGGAT+GGG | + | chr8_3:24718711-24718730 | None:intergenic | 45.0% | |
| AAAGGGTGGGAGAGAAACAT+GGG | + | chr8_3:24718749-24718768 | None:intergenic | 45.0% | |
| !! | TGAGAGATGCTAGAGGTGTT+TGG | + | chr8_3:24718774-24718793 | None:intergenic | 45.0% |
| ACTTTCCCAAACTCAGGCTT+AGG | - | chr8_3:24718799-24718818 | Msa1283200:intron | 45.0% | |
| TTTGGCCTAAGCCTGAGTTT+GGG | + | chr8_3:24718807-24718826 | None:intergenic | 45.0% | |
| ATTTGGCCTAAGCCTGAGTT+TGG | + | chr8_3:24718808-24718827 | None:intergenic | 45.0% | |
| TCCACTGTGGTTATTGACAG+TGG | - | chr8_3:24718871-24718890 | Msa1283200:intron | 45.0% | |
| ACCACTGTCAATAACCACAG+TGG | + | chr8_3:24718875-24718894 | None:intergenic | 45.0% | |
| ! | CTTTAGGGACTGCTTGATAC+CGG | - | chr8_3:24718989-24719008 | Msa1283200:intron | 45.0% |
| TTTAGGGACTGCTTGATACC+GGG | - | chr8_3:24718990-24719009 | Msa1283200:intron | 45.0% | |
| !!! | AGGTTTTATTAGGCCGGGTT+GGG | - | chr8_3:24719193-24719212 | Msa1283200:intron | 45.0% |
| GAAAGGATATTCTCCCAACC+CGG | + | chr8_3:24719209-24719228 | None:intergenic | 45.0% | |
| AAGCAAGGAAGCCTGAGTAT+GGG | + | chr8_3:24719257-24719276 | None:intergenic | 45.0% | |
| AAACTGGGGAGAATGTAGGA+AGG | + | chr8_3:24719288-24719307 | None:intergenic | 45.0% | |
| TGGTTTATTGAGGGGAGGAA+GGG | + | chr8_3:24719348-24719367 | None:intergenic | 45.0% | |
| ! | TAAGCTGGTTTATTGAGGGG+AGG | + | chr8_3:24719353-24719372 | None:intergenic | 45.0% |
| ! | CCCATTAACTGCCTTGTTCA+TGG | + | chr8_3:24719793-24719812 | None:intergenic | 45.0% |
| AATCCAGGTGAGGATAATCC+AGG | - | chr8_3:24719825-24719844 | Msa1283200:intron | 45.0% | |
| AATCCAGGTGAAGGAGATGA+TGG | - | chr8_3:24719840-24719859 | Msa1283200:intron | 45.0% | |
| ATGGATGGTCTGTTGTCTCA+AGG | - | chr8_3:24719859-24719878 | Msa1283200:intron | 45.0% | |
| CCTCTAACTCACAATGGATC+GGG | - | chr8_3:24720141-24720160 | Msa1283200:exon | 45.0% | |
| !!! | CATTATATTATTAATTTTTA+AGG | - | chr8_3:24719916-24719935 | Msa1283200:intron | 5.0% |
| !! | GGTGGTCCTTGTAGCTTGTT+AGG | + | chr8_3:24716518-24716537 | None:intergenic | 50.0% |
| CCTTCGGTGAATGCTTGAAG+GGG | + | chr8_3:24716539-24716558 | None:intergenic | 50.0% | |
| GAACCGCCGTTGAAAATGAG+TGG | - | chr8_3:24716594-24716613 | Msa1283200:three_prime_UTR | 50.0% | |
| ! | AGCCCACTCATTTTCAACGG+CGG | + | chr8_3:24716600-24716619 | None:intergenic | 50.0% |
| GAACCAAGCAAGGACATCAG+CGG | + | chr8_3:24716657-24716676 | None:intergenic | 50.0% | |
| TTTATAAGTGGCCGAGTGGG+GGG | + | chr8_3:24717196-24717215 | None:intergenic | 50.0% | |
| GTTTATAAGTGGCCGAGTGG+GGG | + | chr8_3:24717197-24717216 | None:intergenic | 50.0% | |
| TCCCCTCACAAGTCACTTCT+AGG | - | chr8_3:24717262-24717281 | Msa1283200:intron | 50.0% | |
| TGCACACCAGAATAAGCAGC+TGG | + | chr8_3:24717998-24718017 | None:intergenic | 50.0% | |
| GAGGGAAAGCTGGTAGGAAA+TGG | + | chr8_3:24718659-24718678 | None:intergenic | 50.0% | |
| GAGAGGTGATTGAGGTGTGA+AGG | + | chr8_3:24718689-24718708 | None:intergenic | 50.0% | |
| TAGGATGGGAGAGGTGATTG+AGG | + | chr8_3:24718697-24718716 | None:intergenic | 50.0% | |
| TTAGACGCATAGGATGGGAG+AGG | + | chr8_3:24718706-24718725 | None:intergenic | 50.0% | |
| CGTCAGTTAGACGCATAGGA+TGG | + | chr8_3:24718712-24718731 | None:intergenic | 50.0% | |
| AGCACGTCAGTTAGACGCAT+AGG | + | chr8_3:24718716-24718735 | None:intergenic | 50.0% | |
| AAGGGTGGGAGAGAAACATG+GGG | + | chr8_3:24718748-24718767 | None:intergenic | 50.0% | |
| CAAAGGGTGGGAGAGAAACA+TGG | + | chr8_3:24718750-24718769 | None:intergenic | 50.0% | |
| CATGTTTCTCTCCCACCCTT+TGG | - | chr8_3:24718748-24718767 | Msa1283200:intron | 50.0% | |
| !! | GCTAGAGGTGTTTGGCCAAA+GGG | + | chr8_3:24718766-24718785 | None:intergenic | 50.0% |
| !! | TGCTAGAGGTGTTTGGCCAA+AGG | + | chr8_3:24718767-24718786 | None:intergenic | 50.0% |
| ! | TGACGGAACTTGTTCCACTG+TGG | - | chr8_3:24718858-24718877 | Msa1283200:intron | 50.0% |
| ! | TCCTTTAAGCAAGGGTGCAC+CGG | + | chr8_3:24719167-24719186 | None:intergenic | 50.0% |
| !!! | CAGGTTTTATTAGGCCGGGT+TGG | - | chr8_3:24719192-24719211 | Msa1283200:intron | 50.0% |
| GAATTCGTGCTCCCATACTC+AGG | - | chr8_3:24719243-24719262 | Msa1283200:intron | 50.0% | |
| CAAGCAAGGAAGCCTGAGTA+TGG | + | chr8_3:24719258-24719277 | None:intergenic | 50.0% | |
| GTTTATTGAGGGGAGGAAGG+GGG | + | chr8_3:24719346-24719365 | None:intergenic | 50.0% | |
| GGTTTATTGAGGGGAGGAAG+GGG | + | chr8_3:24719347-24719366 | None:intergenic | 50.0% | |
| CTGGTTTATTGAGGGGAGGA+AGG | + | chr8_3:24719349-24719368 | None:intergenic | 50.0% | |
| ATGTAGCCAGCCCAACTTGT+AGG | - | chr8_3:24719452-24719471 | Msa1283200:intron | 50.0% | |
| TCACCTGGATTATCCTCACC+TGG | + | chr8_3:24719831-24719850 | None:intergenic | 50.0% | |
| GGTGAGGATAATCCAGGTGA+AGG | - | chr8_3:24719831-24719850 | Msa1283200:intron | 50.0% | |
| CATCCATCATCTCCTTCACC+TGG | + | chr8_3:24719846-24719865 | None:intergenic | 50.0% | |
| !! | CAGGTGAAGGAGATGATGGA+TGG | - | chr8_3:24719844-24719863 | Msa1283200:intron | 50.0% |
| GATGGTCTGTTGTCTCAAGG+AGG | - | chr8_3:24719862-24719881 | Msa1283200:intron | 50.0% | |
| CCCGATCCATTGTGAGTTAG+AGG | + | chr8_3:24720144-24720163 | None:intergenic | 50.0% | |
| ! | TCACAGTTTTCACGCTGTGC+AGG | - | chr8_3:24720184-24720203 | Msa1283200:intron | 50.0% |
| TCGGTGAATGCTTGAAGGGG+TGG | + | chr8_3:24716536-24716555 | None:intergenic | 55.0% | |
| CCCCTTCAAGCATTCACCGA+AGG | - | chr8_3:24716536-24716555 | Msa1283200:three_prime_UTR | 55.0% | |
| GCCGTTGAAAATGAGTGGGC+TGG | - | chr8_3:24716599-24716618 | Msa1283200:three_prime_UTR | 55.0% | |
| CCTGACAGCAAGTTGCCCAA+CGG | - | chr8_3:24717314-24717333 | Msa1283200:intron | 55.0% | |
| AGGGTGGGAGAGAAACATGG+GGG | + | chr8_3:24718747-24718766 | None:intergenic | 55.0% | |
| ! | GAGGTGTTTGGCCAAAGGGT+GGG | + | chr8_3:24718762-24718781 | None:intergenic | 55.0% |
| !! | AGAGGTGTTTGGCCAAAGGG+TGG | + | chr8_3:24718763-24718782 | None:intergenic | 55.0% |
| ACGCGCACTTTCCCAAACTC+AGG | - | chr8_3:24718793-24718812 | Msa1283200:intron | 55.0% | |
| TCCGGTGCACCCTTGCTTAA+AGG | - | chr8_3:24719163-24719182 | Msa1283200:intron | 55.0% | |
| AGGAAGGTGGCTAGCAAGCA+AGG | + | chr8_3:24719272-24719291 | None:intergenic | 55.0% | |
| CTGGGGAGAATGTAGGAAGG+TGG | + | chr8_3:24719285-24719304 | None:intergenic | 55.0% | |
| ! | GGCAGTTAATGGGTCTCAGC+CGG | - | chr8_3:24719800-24719819 | Msa1283200:intron | 55.0% |
| TCAGCCGGAAAATCCAGGTG+AGG | - | chr8_3:24719815-24719834 | Msa1283200:intron | 55.0% | |
| !! | CGGCGAGTTGGTGAGCTTTG+AGG | + | chr8_3:24716637-24716656 | None:intergenic | 60.0% |
| CAAGGACATCAGCGGCGAGT+TGG | + | chr8_3:24716649-24716668 | None:intergenic | 60.0% | |
| TCGCCGCTGATGTCCTTGCT+TGG | - | chr8_3:24716651-24716670 | Msa1283200:three_prime_UTR | 60.0% | |
| !! | CCGTTGGGCAACTTGCTGTC+AGG | + | chr8_3:24717317-24717336 | None:intergenic | 60.0% |
| GGGTGGGAGAGAAACATGGG+GGG | + | chr8_3:24718746-24718765 | None:intergenic | 60.0% | |
| GTGCGCGTGAGAGATGCTAG+AGG | + | chr8_3:24718781-24718800 | None:intergenic | 60.0% | |
| TGAGGGGAGGAAGGGGGTAA+TGG | + | chr8_3:24719340-24719359 | None:intergenic | 60.0% | |
| GGGTCTCAGCCGGAAAATCC+AGG | - | chr8_3:24719810-24719829 | Msa1283200:intron | 60.0% | |
| GTGAGGACTGTCCCCCCACT+CGG | - | chr8_3:24717182-24717201 | Msa1283200:intron | 65.0% | |
| ! | GGAGGAAGGGGGTAATGGCC+AGG | + | chr8_3:24719335-24719354 | None:intergenic | 65.0% |
| !! | CGGTTCGGAGCGCCGACCAA+CGG | + | chr8_3:24716580-24716599 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 24716385 | 24720269 | 24716385 | ID=Msa1283200;Name=Msa1283200 |
| chr8_3 | mRNA | 24716385 | 24720269 | 24716385 | ID=Msa1283200-mRNA-1;Parent=Msa1283200;Name=Msa1283200-mRNA-1;_AED=0.27;_eAED=0.27;_QI=99|0.66|0.75|1|0.33|0.25|4|361|173 |
| chr8_3 | exon | 24716385 | 24716973 | 24716385 | ID=Msa1283200-mRNA-1:exon:8701;Parent=Msa1283200-mRNA-1 |
| chr8_3 | exon | 24718633 | 24718742 | 24718633 | ID=Msa1283200-mRNA-1:exon:8700;Parent=Msa1283200-mRNA-1 |
| chr8_3 | exon | 24719965 | 24720171 | 24719965 | ID=Msa1283200-mRNA-1:exon:8699;Parent=Msa1283200-mRNA-1 |
| chr8_3 | exon | 24720194 | 24720269 | 24720194 | ID=Msa1283200-mRNA-1:exon:8698;Parent=Msa1283200-mRNA-1 |
| chr8_3 | five_prime_UTR | 24720194 | 24720269 | 24720194 | ID=Msa1283200-mRNA-1:five_prime_utr;Parent=Msa1283200-mRNA-1 |
| chr8_3 | five_prime_UTR | 24720149 | 24720171 | 24720149 | ID=Msa1283200-mRNA-1:five_prime_utr;Parent=Msa1283200-mRNA-1 |
| chr8_3 | CDS | 24719965 | 24720148 | 24719965 | ID=Msa1283200-mRNA-1:cds;Parent=Msa1283200-mRNA-1 |
| chr8_3 | CDS | 24718633 | 24718742 | 24718633 | ID=Msa1283200-mRNA-1:cds;Parent=Msa1283200-mRNA-1 |
| chr8_3 | CDS | 24716746 | 24716973 | 24716746 | ID=Msa1283200-mRNA-1:cds;Parent=Msa1283200-mRNA-1 |
| chr8_3 | three_prime_UTR | 24716385 | 24716745 | 24716385 | ID=Msa1283200-mRNA-1:three_prime_utr;Parent=Msa1283200-mRNA-1 |
| Gene Sequence |
| Protein sequence |
