Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284350 | XP_013445291.1 | 98.010 | 603 | 7 | 1 | 1 | 603 | 1 | 598 | 0.0 | 1215 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284350 | sp|Q54V77|PYRG_DICDI | 59.233 | 574 | 205 | 7 | 1 | 554 | 1 | 565 | 0.0 | 686 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284350 | A0A072TPJ2 | 98.010 | 603 | 7 | 1 | 1 | 603 | 1 | 598 | 0.0 | 1215 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003610 | Msa1284350 | 0.815180 | 1.054714e-51 | -8.615850e-47 |
| Msa1284350 | Msa1299590 | 0.812886 | 3.383175e-51 | -8.615850e-47 |
| Msa1024180 | Msa1284350 | 0.812451 | 4.211274e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284350 | MtrunA17_Chr8g0356221 | 98.010 | 603 | 7 | 1 | 1 | 603 | 1 | 598 | 0.0 | 1215 |
| Msa1284350 | MtrunA17_Chr2g0309341 | 85.809 | 606 | 76 | 4 | 1 | 603 | 1 | 599 | 0.0 | 1067 |
| Msa1284350 | MtrunA17_Chr8g0369081 | 79.061 | 554 | 111 | 1 | 1 | 554 | 1 | 549 | 0.0 | 931 |
| Msa1284350 | MtrunA17_Chr1g0195001 | 72.563 | 554 | 147 | 1 | 1 | 554 | 1 | 549 | 0.0 | 850 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1284350 | AT3G12670.1 | 78.451 | 594 | 119 | 4 | 1 | 591 | 1 | 588 | 0.0 | 944 |
| Msa1284350 | AT1G30820.1 | 76.119 | 603 | 130 | 3 | 1 | 600 | 1 | 592 | 0.0 | 936 |
| Msa1284350 | AT4G20320.2 | 76.951 | 551 | 122 | 1 | 1 | 551 | 1 | 546 | 0.0 | 895 |
| Msa1284350 | AT4G20320.5 | 76.951 | 551 | 122 | 1 | 1 | 551 | 1 | 546 | 0.0 | 895 |
| Msa1284350 | AT4G20320.6 | 76.951 | 551 | 122 | 1 | 1 | 551 | 1 | 546 | 0.0 | 895 |
| Msa1284350 | AT4G20320.4 | 76.951 | 551 | 122 | 1 | 1 | 551 | 1 | 546 | 0.0 | 895 |
| Msa1284350 | AT4G20320.1 | 76.951 | 551 | 122 | 1 | 1 | 551 | 1 | 546 | 0.0 | 895 |
| Msa1284350 | AT2G34890.1 | 73.188 | 552 | 143 | 1 | 1 | 552 | 1 | 547 | 0.0 | 862 |
| Msa1284350 | AT4G02120.1 | 71.067 | 553 | 155 | 1 | 1 | 553 | 1 | 548 | 0.0 | 840 |
| Msa1284350 | AT4G02120.2 | 68.522 | 575 | 154 | 2 | 1 | 553 | 1 | 570 | 0.0 | 829 |
| Msa1284350 | AT4G20320.3 | 76.295 | 502 | 114 | 1 | 50 | 551 | 1 | 497 | 0.0 | 828 |
| Msa1284350 | AT4G02120.5 | 68.354 | 553 | 131 | 2 | 1 | 553 | 1 | 509 | 0.0 | 789 |
| Msa1284350 | AT4G02120.3 | 71.984 | 489 | 132 | 1 | 1 | 489 | 1 | 484 | 0.0 | 748 |
| Msa1284350 | AT4G02120.4 | 72.187 | 471 | 126 | 1 | 1 | 471 | 1 | 466 | 0.0 | 716 |
Find 164 sgRNAs with CRISPR-Local
Find 414 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCAGCATGAAGCAAATTT+TGG | 0.119413 | 8_3:-26538774 | Msa1284350:three_prime_UTR |
| AGAAAACAATGTTCCGTTTC+TGG | 0.123964 | 8_3:-26540916 | Msa1284350:CDS |
| GAGCTATATTGTAGGGTTTA+TGG | 0.167926 | 8_3:-26545600 | Msa1284350:five_prime_UTR |
| CGAGTTACTTCTATCAAAAT+TGG | 0.203950 | 8_3:-26545224 | Msa1284350:intron |
| TACCTACGCGGTACGAAAAT+TGG | 0.215136 | 8_3:+26543227 | None:intergenic |
| TGAATTTGCAAGATCTGTTC+TGG | 0.217134 | 8_3:-26540862 | Msa1284350:CDS |
| CGTGGTCATCCTTTCTTTAT+CGG | 0.229255 | 8_3:-26539985 | Msa1284350:CDS |
| ACTTATATCTAATATATAAA+AGG | 0.249841 | 8_3:+26545647 | None:intergenic |
| AGCACAATTGTAAGCTAAAA+AGG | 0.250201 | 8_3:+26538891 | None:intergenic |
| GGATTGCCTCATGTGCCTTC+TGG | 0.273802 | 8_3:+26542416 | None:intergenic |
| CTGCGACAAGCAAGAAGATT+TGG | 0.285626 | 8_3:+26542887 | None:intergenic |
| ATTCTAGTTCCGGGAGGTTT+TGG | 0.289445 | 8_3:-26540984 | Msa1284350:CDS |
| TCCAATAAGTTAATCCAAAA+AGG | 0.294394 | 8_3:-26545486 | Msa1284350:five_prime_UTR |
| CACTACTAACCTCGTATCTA+TGG | 0.308941 | 8_3:+26540288 | None:intergenic |
| GTTGTGGACTGGGTTCCTGC+TGG | 0.309649 | 8_3:-26541322 | Msa1284350:CDS |
| CTTACACATAAGCATTTATA+TGG | 0.314328 | 8_3:+26545704 | None:intergenic |
| AAAGGAATGTGCCAGATATT+TGG | 0.317765 | 8_3:+26542591 | None:intergenic |
| TTTGTTGGCAAAGACGAAAC+TGG | 0.321893 | 8_3:-26540147 | Msa1284350:CDS |
| TTGGCCAAGTGCTTCAATAA+AGG | 0.324515 | 8_3:+26543246 | None:intergenic |
| TCCGTTTCTGGGCATTTGCT+TGG | 0.329029 | 8_3:-26540904 | Msa1284350:CDS |
| TGATGTTTGTGTCATTGAAT+TGG | 0.334563 | 8_3:-26543663 | Msa1284350:CDS |
| AACTTGTTTCTAAGCATATT+AGG | 0.349638 | 8_3:-26538744 | Msa1284350:three_prime_UTR |
| GTGCCTGTTCTTAATGTTGT+TGG | 0.351976 | 8_3:-26543061 | Msa1284350:CDS |
| CAACGGTGTTTAAGTGGAAT+AGG | 0.355350 | 8_3:-26538929 | Msa1284350:exon |
| CCGTTTCTGGGCATTTGCTT+GGG | 0.358815 | 8_3:-26540903 | Msa1284350:CDS |
| TTCAGTTATTACCTCTTTCA+AGG | 0.359708 | 8_3:+26541282 | None:intergenic |
| GTCCGTCAACTTAGAGGGTT+AGG | 0.366899 | 8_3:-26542917 | Msa1284350:CDS |
| CGCGACAATAATATCACAAC+TGG | 0.369304 | 8_3:-26544041 | Msa1284350:CDS |
| GAAAACAATGTTCCGTTTCT+GGG | 0.370649 | 8_3:-26540915 | Msa1284350:CDS |
| TTTAGCTTACAATTGTGCTT+TGG | 0.372677 | 8_3:-26538887 | Msa1284350:three_prime_UTR |
| AGGCCCTAGCAACTTCTGTT+TGG | 0.373276 | 8_3:-26543098 | Msa1284350:CDS |
| TTGTCCCTGCATCAGTGTTC+AGG | 0.380045 | 8_3:+26544457 | None:intergenic |
| CCTGGTCTCGACTTGAACTC+AGG | 0.384145 | 8_3:+26539949 | None:intergenic |
| TGCTAATGGAATTCTAGTTC+CGG | 0.385779 | 8_3:-26540994 | Msa1284350:CDS |
| GTGACTGGTGGAGTTGTTAG+TGG | 0.388270 | 8_3:-26545305 | Msa1284350:CDS |
| CTGAAAACATTAAACCTTCA+AGG | 0.390064 | 8_3:-26542394 | Msa1284350:CDS |
| ACTTAAACACCGTTGCCATT+AGG | 0.390152 | 8_3:+26538937 | None:intergenic |
| TTACGAGAACTTAAAGAAAC+AGG | 0.390682 | 8_3:+26545542 | None:intergenic |
| ATTGAATTGGGTGGAACTAT+AGG | 0.394105 | 8_3:-26543650 | Msa1284350:intron |
| GGAGAAAATGAAGTATGTTT+TGG | 0.396267 | 8_3:-26545327 | Msa1284350:exon |
| GCAAATGGTGCAAGTCCTAA+TGG | 0.396912 | 8_3:-26538952 | Msa1284350:CDS |
| TTTGTAATGATACTGATATA+TGG | 0.397165 | 8_3:-26545411 | Msa1284350:five_prime_UTR |
| TGGCCAAGTGCTTCAATAAA+GGG | 0.402562 | 8_3:+26543247 | None:intergenic |
| CACAGTGTCCGTCAACTTAG+AGG | 0.402771 | 8_3:-26542923 | Msa1284350:CDS |
| TGCATATCTATCTGTATTGA+AGG | 0.403863 | 8_3:-26541983 | Msa1284350:intron |
| TAAGTTGACGGACACTGTGC+TGG | 0.404259 | 8_3:+26542927 | None:intergenic |
| GATGTTTGTGTCATTGAATT+GGG | 0.405740 | 8_3:-26543662 | Msa1284350:CDS |
| TTTGGTTTCGGGATCAAATT+CGG | 0.406290 | 8_3:+26540818 | None:intergenic |
| TTGAAGGTTGACCTTGATCT+TGG | 0.410753 | 8_3:-26544098 | Msa1284350:intron |
| CAGCATTGGAGTACTCCTTC+AGG | 0.411265 | 8_3:-26545258 | Msa1284350:CDS |
| TTGTGGACTGGGTTCCTGCT+GGG | 0.411387 | 8_3:-26541321 | Msa1284350:CDS |
| TCTTAATGTTGTTGGTGAAC+AGG | 0.417402 | 8_3:-26543053 | Msa1284350:intron |
| AGCATATTAGGTGAAGCTTA+TGG | 0.420055 | 8_3:-26538732 | Msa1284350:three_prime_UTR |
| TCGAAAGCACAAAATGCAAA+TGG | 0.426783 | 8_3:-26538997 | Msa1284350:CDS |
| GTGATCCACGCCTTAAAATC+AGG | 0.427328 | 8_3:+26542192 | None:intergenic |
| GAATTTGCAAGATCTGTTCT+GGG | 0.428670 | 8_3:-26540861 | Msa1284350:CDS |
| TCTTCCAATGGTTCTGCAAA+TGG | 0.429495 | 8_3:-26538967 | Msa1284350:CDS |
| TGCGACAAGCAAGAAGATTT+GGG | 0.429519 | 8_3:+26542888 | None:intergenic |
| GCTTGTACAGTTTGAGTGGT+TGG | 0.432588 | 8_3:-26538833 | Msa1284350:three_prime_UTR |
| TTTGTCAAACAAACCCTTGA+AGG | 0.436466 | 8_3:+26542380 | None:intergenic |
| CAAGCAGCTTTATATGCATC+AGG | 0.441448 | 8_3:+26541174 | None:intergenic |
| GCAATGGTGGGAAAATATAC+TGG | 0.447249 | 8_3:-26542015 | Msa1284350:CDS |
| GTTCATAGTTTCCAAGATCA+AGG | 0.447669 | 8_3:+26544087 | None:intergenic |
| TCTGTGATGTTCCAAATATC+TGG | 0.448437 | 8_3:-26542602 | Msa1284350:CDS |
| GTAGCACAGGTACCGGTTGA+TGG | 0.449966 | 8_3:-26543701 | Msa1284350:CDS |
| CTACACGTTCTATCCACTCT+TGG | 0.450989 | 8_3:+26543720 | None:intergenic |
| AACGGTGTTTAAGTGGAATA+GGG | 0.456466 | 8_3:-26538928 | Msa1284350:exon |
| GAGGTGTTTGTGTTAGATGA+TGG | 0.456598 | 8_3:-26544414 | Msa1284350:CDS |
| CCGCAAGCTAGTTGTGGACT+GGG | 0.457386 | 8_3:-26541332 | Msa1284350:CDS |
| AACACCTCCCCATGCTCAAA+AGG | 0.458280 | 8_3:+26544429 | None:intergenic |
| GCTAATGGAATTCTAGTTCC+GGG | 0.459253 | 8_3:-26540993 | Msa1284350:CDS |
| CCCTACCTGAACACTGATGC+AGG | 0.462731 | 8_3:-26544462 | Msa1284350:CDS |
| GAAAGAAGAGGAGATTATCT+TGG | 0.469066 | 8_3:-26543878 | Msa1284350:CDS |
| ACCCTAACCCTCTAAGTTGA+CGG | 0.474824 | 8_3:+26542915 | None:intergenic |
| ATAGGGTTCAAAGACACATA+TGG | 0.477085 | 8_3:-26540674 | Msa1284350:intron |
| GGAGTGACTGCTAGCAGCAT+TGG | 0.478966 | 8_3:-26545272 | Msa1284350:CDS |
| GGTGGAGTTGTTAGTGGACT+TGG | 0.484044 | 8_3:-26545299 | Msa1284350:CDS |
| ACCGCAAGCTAGTTGTGGAC+TGG | 0.486690 | 8_3:-26541333 | Msa1284350:CDS |
| TGAAAACATTAAACCTTCAA+GGG | 0.490605 | 8_3:-26542393 | Msa1284350:intron |
| TGCACCATTTGCAGAACCAT+TGG | 0.492550 | 8_3:+26538963 | None:intergenic |
| GAACCATGCGTCTTGGTTCA+AGG | 0.494863 | 8_3:-26540648 | Msa1284350:CDS |
| TCAAGTTGTGATATCATGTC+AGG | 0.494895 | 8_3:+26540186 | None:intergenic |
| TCAATGACACAAACATCAGC+AGG | 0.497675 | 8_3:+26543668 | None:intergenic |
| CCTGAGTTCAAGTCGAGACC+AGG | 0.499373 | 8_3:-26539949 | Msa1284350:CDS |
| TCTTGCTTGTCGCAGTTCAA+AGG | 0.505172 | 8_3:-26542879 | Msa1284350:intron |
| CCCAAGCAAATGCCCAGAAA+CGG | 0.506535 | 8_3:+26540903 | None:intergenic |
| ATGCCCTTTATTGAAGCACT+TGG | 0.511552 | 8_3:-26543250 | Msa1284350:CDS |
| CGTTTGTAGTAAATAAATTG+AGG | 0.517968 | 8_3:-26545348 | Msa1284350:five_prime_UTR |
| AAACCTTCTCCACTATTCTC+AGG | 0.518467 | 8_3:-26539925 | Msa1284350:intron |
| TAATGGCAACGGTGTTTAAG+TGG | 0.519342 | 8_3:-26538935 | Msa1284350:exon |
| AATTCAAAAGACAATGAAAG+TGG | 0.519499 | 8_3:+26538600 | None:intergenic |
| CTGATGCATATAAAGCTGCT+TGG | 0.520246 | 8_3:-26541173 | Msa1284350:CDS |
| TTTGGTGATAGAGGAGTGCA+AGG | 0.521090 | 8_3:-26540966 | Msa1284350:CDS |
| CGAAAGCACAAAATGCAAAT+GGG | 0.521607 | 8_3:-26538996 | Msa1284350:CDS |
| TCACCAACAACATTAAGAAC+AGG | 0.524605 | 8_3:+26543058 | None:intergenic |
| TGAAGATGATACCTTGAAAG+AGG | 0.527163 | 8_3:-26541293 | Msa1284350:intron |
| TGTGGACTGGGTTCCTGCTG+GGG | 0.528413 | 8_3:-26541320 | Msa1284350:CDS |
| TTGTTGGCAAAGACGAAACT+GGG | 0.529608 | 8_3:-26540146 | Msa1284350:CDS |
| AATAGTGGAGAAGGTTTCCC+TGG | 0.530018 | 8_3:+26539931 | None:intergenic |
| GGAAATGCAAATTTAACCAA+TGG | 0.532892 | 8_3:-26539045 | Msa1284350:CDS |
| AATAGAAGCAGCATGTAAGA+AGG | 0.536155 | 8_3:-26539088 | Msa1284350:CDS |
| TCCGTCAACTTAGAGGGTTA+GGG | 0.537085 | 8_3:-26542916 | Msa1284350:CDS |
| CATAGGATAAGCAGCTAAAG+AGG | 0.537391 | 8_3:-26545374 | Msa1284350:five_prime_UTR |
| GGAGTACTCCTTCAGGCTTG+TGG | 0.539994 | 8_3:-26545251 | Msa1284350:CDS |
| TGAACCAAACAGAAGTTGCT+AGG | 0.542600 | 8_3:+26543094 | None:intergenic |
| AACTGAGCACCGATAAAGAA+AGG | 0.542763 | 8_3:+26539976 | None:intergenic |
| TTCACAGGTTAGAATTGCAA+TGG | 0.546630 | 8_3:-26542031 | Msa1284350:intron |
| CCTGCATCAGTGTTCAGGTA+GGG | 0.549793 | 8_3:+26544462 | None:intergenic |
| TAGGGTTCAAAGACACATAT+GGG | 0.551014 | 8_3:-26540673 | Msa1284350:CDS |
| GTACCGGTTGATGGAAAAGA+AGG | 0.552136 | 8_3:-26543692 | Msa1284350:CDS |
| GTTGTTAGTGGACTTGGCAA+AGG | 0.553070 | 8_3:-26545293 | Msa1284350:CDS |
| TTATCTTGGCAAAACTGTCC+AGG | 0.554077 | 8_3:-26543864 | Msa1284350:intron |
| ATATCACAACTTGAGACTGC+TGG | 0.554185 | 8_3:-26540177 | Msa1284350:CDS |
| GTGTGATTCATGTACTCCAT+TGG | 0.558146 | 8_3:+26539029 | None:intergenic |
| ATGGGTGGAACCATGCGTCT+TGG | 0.559810 | 8_3:-26540655 | Msa1284350:CDS |
| TTACTTACTCTTAACAGCAA+AGG | 0.562072 | 8_3:+26542573 | None:intergenic |
| GTTGTTGAGAAGGAAAGAAG+AGG | 0.562157 | 8_3:-26543890 | Msa1284350:CDS |
| TTGTTATGAATAGGACCAGA+AGG | 0.562243 | 8_3:-26542431 | Msa1284350:intron |
| GGAACTTGATGATAATGTCA+AGG | 0.564596 | 8_3:-26542770 | Msa1284350:CDS |
| CAGGTTAGAATTGCAATGGT+GGG | 0.567056 | 8_3:-26542027 | Msa1284350:CDS |
| GTGGATAGAACGTGTAGCAC+AGG | 0.567244 | 8_3:-26543714 | Msa1284350:CDS |
| AGAACGTGTAGCACAGGTAC+CGG | 0.569061 | 8_3:-26543708 | Msa1284350:CDS |
| GTAATAGTCTGTTGTTGAGA+AGG | 0.571137 | 8_3:-26543900 | Msa1284350:intron |
| CCCTGCATCAGTGTTCAGGT+AGG | 0.573304 | 8_3:+26544461 | None:intergenic |
| CTGGTCTCGACTTGAACTCA+GGG | 0.573336 | 8_3:+26539950 | None:intergenic |
| GAACTTGATGATAATGTCAA+GGG | 0.573965 | 8_3:-26542769 | Msa1284350:CDS |
| GTTAGCTTGTACAGTTTGAG+TGG | 0.575752 | 8_3:-26538837 | Msa1284350:three_prime_UTR |
| GTGTTTGTGTTAGATGATGG+TGG | 0.576549 | 8_3:-26544411 | Msa1284350:CDS |
| AGCTGCTTGGAGTCTTCTAG+AGG | 0.579541 | 8_3:-26541160 | Msa1284350:intron |
| AATGGGTTCATATCTTCCAA+TGG | 0.579809 | 8_3:-26538979 | Msa1284350:CDS |
| ATACCTGAGAATAGTGGAGA+AGG | 0.580187 | 8_3:+26539922 | None:intergenic |
| TGACGGACACTGTGCTGGGT+TGG | 0.582593 | 8_3:+26542932 | None:intergenic |
| TGTGTTAGATGATGGTGGTG+AGG | 0.583298 | 8_3:-26544406 | Msa1284350:intron |
| TTGCAACCGCAAGCTAGTTG+TGG | 0.584400 | 8_3:-26541338 | Msa1284350:CDS |
| CTCGAAAGCCACAAGCCTGA+AGG | 0.586213 | 8_3:+26545243 | None:intergenic |
| GTTTGTGTCATTGAATTGGG+TGG | 0.588891 | 8_3:-26543659 | Msa1284350:CDS |
| AGACGAAACTGGGAGGCGAA+TGG | 0.592992 | 8_3:-26540136 | Msa1284350:CDS |
| CAGATAGATATGCATCTGAA+AGG | 0.596747 | 8_3:+26541992 | None:intergenic |
| CCTCTATCACCAAAACCTCC+CGG | 0.597053 | 8_3:+26540975 | None:intergenic |
| GCAGTTGTTTCAAATAACAA+AGG | 0.599913 | 8_3:-26539066 | Msa1284350:CDS |
| AAGTTGACGGACACTGTGCT+GGG | 0.602809 | 8_3:+26542928 | None:intergenic |
| GAACCAAACAGAAGTTGCTA+GGG | 0.609075 | 8_3:+26543095 | None:intergenic |
| TCTCCTTGAACCAAGACGCA+TGG | 0.610992 | 8_3:+26540645 | None:intergenic |
| TCATCTTCAAGATCCCCAGC+AGG | 0.614139 | 8_3:+26541307 | None:intergenic |
| ACAGGTTAGAATTGCAATGG+TGG | 0.617767 | 8_3:-26542028 | Msa1284350:intron |
| CGAAACTGGGAGGCGAATGG+AGG | 0.619877 | 8_3:-26540133 | Msa1284350:intron |
| ACAGTGTCCGTCAACTTAGA+GGG | 0.620519 | 8_3:-26542922 | Msa1284350:CDS |
| GGTGCAAGTCCTAATGGCAA+CGG | 0.631322 | 8_3:-26538946 | Msa1284350:CDS |
| TGGATAGCATCTGTGATGTG+TGG | 0.639962 | 8_3:+26543740 | None:intergenic |
| CCCAGTCCACAACTAGCTTG+CGG | 0.641660 | 8_3:+26541332 | None:intergenic |
| TCACAGATGCTATCCAAGAG+TGG | 0.647858 | 8_3:-26543733 | Msa1284350:CDS |
| ATAGGACCAGAAGGCACATG+AGG | 0.654470 | 8_3:-26542422 | Msa1284350:intron |
| CTGAGTTCAAGTCGAGACCA+GGG | 0.658904 | 8_3:-26539948 | Msa1284350:CDS |
| CCTACCTGAACACTGATGCA+GGG | 0.681821 | 8_3:-26544461 | Msa1284350:CDS |
| TTGGTGATAGAGGAGTGCAA+GGG | 0.684921 | 8_3:-26540965 | Msa1284350:CDS |
| GGTTCAAAGACACATATGGG+TGG | 0.688648 | 8_3:-26540670 | Msa1284350:CDS |
| TTGCAGATAGTTGAAATGCG+TGG | 0.688978 | 8_3:-26540003 | Msa1284350:intron |
| CAATGACACAAACATCAGCA+GGG | 0.698747 | 8_3:+26543669 | None:intergenic |
| CAACATTAAGAACAGGCACG+AGG | 0.700882 | 8_3:+26543065 | None:intergenic |
| TTGGCAAAGACGAAACTGGG+AGG | 0.709972 | 8_3:-26540143 | Msa1284350:CDS |
| TCGGGCATAAATATGACACA+AGG | 0.714415 | 8_3:+26540792 | None:intergenic |
| GCGACATCGCCATAGATACG+AGG | 0.741308 | 8_3:-26540297 | Msa1284350:intron |
| AATGGAATTCTAGTTCCGGG+AGG | 0.741853 | 8_3:-26540990 | Msa1284350:CDS |
| TATGACAAACATTACCTACG+CGG | 0.821956 | 8_3:+26543215 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTTATATCTAATATATAAA+AGG | + | chr8_3:26538644-26538663 | None:intergenic | 10.0% |
| !!! | GTAATTTAATAGTATATTTT+AGG | - | chr8_3:26541291-26541310 | Msa1284350:intron | 10.0% |
| !! | ATATTTAAATACAATTAAGT+CGG | + | chr8_3:26543228-26543247 | None:intergenic | 10.0% |
| !! | AGGAAAAAAAAAAAAATAGA+AGG | + | chr8_3:26539924-26539943 | None:intergenic | 15.0% |
| !!! | CTATTTTCAATTTTTTTTCT+TGG | - | chr8_3:26540167-26540186 | Msa1284350:CDS | 15.0% |
| !! | ATATAATTCAGTATACTATA+AGG | + | chr8_3:26541106-26541125 | None:intergenic | 15.0% |
| !!! | TGAATTATATCAACATATTT+TGG | - | chr8_3:26541116-26541135 | Msa1284350:intron | 15.0% |
| !!! | CATTGTTTATTTATTTTTCT+AGG | - | chr8_3:26541170-26541189 | Msa1284350:CDS | 15.0% |
| !!! | TAGTTTATTTTGTTAAGAAA+AGG | - | chr8_3:26542382-26542401 | Msa1284350:intron | 15.0% |
| !! | CACTTATATAAATATCTATT+CGG | + | chr8_3:26542679-26542698 | None:intergenic | 15.0% |
| !! | TAATTCACAAATGATTTATA+TGG | - | chr8_3:26542829-26542848 | Msa1284350:intron | 15.0% |
| !! | ATTGAAACATCATATAAAAT+TGG | - | chr8_3:26542892-26542911 | Msa1284350:CDS | 15.0% |
| !!! | ATTATTTAAAATGTGTGTTA+TGG | - | chr8_3:26543886-26543905 | Msa1284350:CDS | 15.0% |
| !!! | TGATGCTATATTTTAATTTT+GGG | - | chr8_3:26543938-26543957 | Msa1284350:intron | 15.0% |
| !! | ATAAAAAAATCAGTCATAAA+TGG | + | chr8_3:26544240-26544259 | None:intergenic | 15.0% |
| !! | AAAAAGATTATATGATTCAA+TGG | + | chr8_3:26545109-26545128 | None:intergenic | 15.0% |
| !!! | GTTGTTTTGATATTTTAATT+TGG | - | chr8_3:26545130-26545149 | Msa1284350:intron | 15.0% |
| !! | TTTGTAATGATACTGATATA+TGG | - | chr8_3:26538877-26538896 | Msa1284350:three_prime_UTR | 20.0% |
| !!! | TTTTTTTTTTTTTCCTGTCA+TGG | - | chr8_3:26539928-26539947 | Msa1284350:CDS | 20.0% |
| !!! | TTTTTTTTTTTTCCTGTCAT+GGG | - | chr8_3:26539929-26539948 | Msa1284350:CDS | 20.0% |
| !!! | ATGTTGCTTTATTTGTTTTA+AGG | - | chr8_3:26540087-26540106 | Msa1284350:intron | 20.0% |
| !!! | AGTAGTTTGTTTAGTTATAA+TGG | - | chr8_3:26540117-26540136 | Msa1284350:intron | 20.0% |
| !! | AAATAGAACATGAGTAAAAA+GGG | + | chr8_3:26540153-26540172 | None:intergenic | 20.0% |
| !! | AAAATAGAACATGAGTAAAA+AGG | + | chr8_3:26540154-26540173 | None:intergenic | 20.0% |
| !! | ACAACCATAACAAATAAATT+CGG | + | chr8_3:26540477-26540496 | None:intergenic | 20.0% |
| !! | TAATCAAAATTCAAAACCAA+GGG | + | chr8_3:26540504-26540523 | None:intergenic | 20.0% |
| !!! | AAATGATTTTACTTTGATGT+AGG | - | chr8_3:26541002-26541021 | Msa1284350:intron | 20.0% |
| !!! | AATGATTTTACTTTGATGTA+GGG | - | chr8_3:26541003-26541022 | Msa1284350:intron | 20.0% |
| !!! | TTATATCAACATATTTTGGT+TGG | - | chr8_3:26541120-26541139 | Msa1284350:intron | 20.0% |
| !! | TGAGAATATATGTATACATA+AGG | + | chr8_3:26541625-26541644 | None:intergenic | 20.0% |
| !! | TCTAGTTAATATATGAATCA+CGG | + | chr8_3:26541816-26541835 | None:intergenic | 20.0% |
| !!! | GATATTGTTTTGTTATGAAT+AGG | - | chr8_3:26541848-26541867 | Msa1284350:intron | 20.0% |
| !!! | TGAATTTTATCCAAATTTCA+GGG | - | chr8_3:26542613-26542632 | Msa1284350:CDS | 20.0% |
| !! | AACAATAAATTAATCATCAG+AGG | + | chr8_3:26543086-26543105 | None:intergenic | 20.0% |
| !!! | GTGATGCTATATTTTAATTT+TGG | - | chr8_3:26543937-26543956 | Msa1284350:intron | 20.0% |
| !! | TGTGTAGAAAACATAAATAA+TGG | + | chr8_3:26544488-26544507 | None:intergenic | 20.0% |
| !!! | AATTTTTAAATGACCTTATC+AGG | + | chr8_3:26544883-26544902 | None:intergenic | 20.0% |
| !!! | AATGACCATATTTTAATACT+TGG | + | chr8_3:26545043-26545062 | None:intergenic | 20.0% |
| !! | GTATTAAAATATGGTCATTA+AGG | - | chr8_3:26545044-26545063 | Msa1284350:intron | 20.0% |
| !!! | TATGGATGATATTTTTGTTT+TGG | - | chr8_3:26545574-26545593 | Msa1284350:five_prime_UTR | 20.0% |
| !! | AATTCATCACATTTATTACA+GGG | + | chr8_3:26545631-26545650 | None:intergenic | 20.0% |
| !! | AAATTCATCACATTTATTAC+AGG | + | chr8_3:26545632-26545651 | None:intergenic | 20.0% |
| ! | CTTACACATAAGCATTTATA+TGG | + | chr8_3:26538587-26538606 | None:intergenic | 25.0% |
| !! | TTTTTGTGAGCTATATTGTA+GGG | - | chr8_3:26538681-26538700 | Msa1284350:intron | 25.0% |
| ! | TCCAATAAGTTAATCCAAAA+AGG | - | chr8_3:26538802-26538821 | Msa1284350:three_prime_UTR | 25.0% |
| !! | TCCTTTTTGGATTAACTTAT+TGG | + | chr8_3:26538806-26538825 | None:intergenic | 25.0% |
| ! | CGTTTGTAGTAAATAAATTG+AGG | - | chr8_3:26538940-26538959 | Msa1284350:CDS | 25.0% |
| ! | AAGTGAGAATTCAATTCTAA+GGG | + | chr8_3:26539098-26539117 | None:intergenic | 25.0% |
| ! | AAAGTGAGAATTCAATTCTA+AGG | + | chr8_3:26539099-26539118 | None:intergenic | 25.0% |
| !! | TCCTTTTGATAAACATTTGA+TGG | - | chr8_3:26539125-26539144 | Msa1284350:intron | 25.0% |
| ! | TCCATCAAATGTTTATCAAA+AGG | + | chr8_3:26539129-26539148 | None:intergenic | 25.0% |
| !!! | AAAGTTTTGTTAAACCAAAC+AGG | + | chr8_3:26539309-26539328 | None:intergenic | 25.0% |
| ! | TATACAAATATTCGAAAGCA+GGG | + | chr8_3:26539388-26539407 | None:intergenic | 25.0% |
| !! | AAACAAGTGTTGTCAAATAA+CGG | - | chr8_3:26539453-26539472 | Msa1284350:intron | 25.0% |
| ! | TGCAAGAAACATTGAAAATA+AGG | - | chr8_3:26539637-26539656 | Msa1284350:intron | 25.0% |
| !!! | AATTCCAATTTTTGATAACG+TGG | - | chr8_3:26540004-26540023 | Msa1284350:intron | 25.0% |
| ! | AGTTGAGTTTCACATTAAAA+TGG | + | chr8_3:26540036-26540055 | None:intergenic | 25.0% |
| !!! | CAATTTTTTTTCTTGGTTGA+AGG | - | chr8_3:26540174-26540193 | Msa1284350:CDS | 25.0% |
| ! | GTAATCAAAATTCAAAACCA+AGG | + | chr8_3:26540505-26540524 | None:intergenic | 25.0% |
| ! | TACTAAGTATTCGAATTTGT+TGG | + | chr8_3:26540679-26540698 | None:intergenic | 25.0% |
| !! | TTTAAAATGTGGTTACAAAG+TGG | + | chr8_3:26540783-26540802 | None:intergenic | 25.0% |
| !!! | TTGCAGTTAGTTTTAAAATG+TGG | + | chr8_3:26540794-26540813 | None:intergenic | 25.0% |
| !! | ATGATTTTACTTTGATGTAG+GGG | - | chr8_3:26541004-26541023 | Msa1284350:intron | 25.0% |
| !!! | AGTTATTTTGTATCAGTTAC+CGG | + | chr8_3:26541570-26541589 | None:intergenic | 25.0% |
| ! | TGAAAACATTAAACCTTCAA+GGG | - | chr8_3:26541895-26541914 | Msa1284350:intron | 25.0% |
| !! | AAATCTCTAAAAATCAACAC+CGG | + | chr8_3:26541993-26542012 | None:intergenic | 25.0% |
| !!! | CAATCATTTTTTAAGGTAAC+TGG | + | chr8_3:26542033-26542052 | None:intergenic | 25.0% |
| !!! | TCGAAGACAATCATTTTTTA+AGG | + | chr8_3:26542040-26542059 | None:intergenic | 25.0% |
| !! | TTTGTGATAAACTTTTGTTG+TGG | + | chr8_3:26542121-26542140 | None:intergenic | 25.0% |
| !! | ATTTCTCATCTAAAATGGTA+TGG | - | chr8_3:26542414-26542433 | Msa1284350:CDS | 25.0% |
| ! | ACAAAATAAAGATGGTGAAT+TGG | + | chr8_3:26542443-26542462 | None:intergenic | 25.0% |
| ! | CATGAGAAACAAAATAAAGA+TGG | + | chr8_3:26542451-26542470 | None:intergenic | 25.0% |
| !!! | AATCACGAGTTTATTGATTT+TGG | - | chr8_3:26542480-26542499 | Msa1284350:intron | 25.0% |
| ! | ATACTCAGTACTAATGATAT+TGG | + | chr8_3:26542557-26542576 | None:intergenic | 25.0% |
| ! | AAGAATTGTAACTAGTCATA+CGG | + | chr8_3:26542580-26542599 | None:intergenic | 25.0% |
| ! | CTGAAATTTGGATAAAATTC+AGG | + | chr8_3:26542614-26542633 | None:intergenic | 25.0% |
| !! | CTGAATTTTATCCAAATTTC+AGG | - | chr8_3:26542612-26542631 | Msa1284350:CDS | 25.0% |
| ! | TCACAAATGATTTATATGGA+TGG | - | chr8_3:26542833-26542852 | Msa1284350:intron | 25.0% |
| !! | AAATATGACACAAGGATTTT+TGG | + | chr8_3:26543491-26543510 | None:intergenic | 25.0% |
| ! | TCGTAACTACAGATATATAT+TGG | + | chr8_3:26543540-26543559 | None:intergenic | 25.0% |
| !!! | TAAACTGCTTTTCTATTGAT+AGG | - | chr8_3:26543596-26543615 | Msa1284350:intron | 25.0% |
| !!! | AAACTGCTTTTCTATTGATA+GGG | - | chr8_3:26543597-26543616 | Msa1284350:intron | 25.0% |
| !!! | AGTTTTTGATTCTTACAACT+TGG | + | chr8_3:26543700-26543719 | None:intergenic | 25.0% |
| ! | AAAACTAAACTCCAGTTTAT+TGG | - | chr8_3:26543714-26543733 | Msa1284350:CDS | 25.0% |
| ! | TTGTATATGTACCAATAAAC+TGG | + | chr8_3:26543728-26543747 | None:intergenic | 25.0% |
| ! | CATATGTTATCATCTATTGA+GGG | - | chr8_3:26543756-26543775 | Msa1284350:intron | 25.0% |
| ! | AAAAATCAGTCATAAATGGT+CGG | + | chr8_3:26544236-26544255 | None:intergenic | 25.0% |
| ! | TATACATGTATCTTATATCC+TGG | - | chr8_3:26544510-26544529 | Msa1284350:intron | 25.0% |
| !!! | AATTTTAATGTCTTGTGTTG+AGG | - | chr8_3:26544916-26544935 | Msa1284350:intron | 25.0% |
| ! | TGATGCCAAGTATTAAAATA+TGG | - | chr8_3:26545035-26545054 | Msa1284350:intron | 25.0% |
| ! | TTAATCCTGTTGTTACAATA+AGG | + | chr8_3:26545182-26545201 | None:intergenic | 25.0% |
| !!! | AACTTGTTTCTAAGCATATT+AGG | - | chr8_3:26545544-26545563 | Msa1284350:five_prime_UTR | 25.0% |
| ! | CTTACATTGGATTAAAATAG+TGG | - | chr8_3:26545599-26545618 | Msa1284350:five_prime_UTR | 25.0% |
| ! | AAAAACCATTTCTACTTTAC+AGG | - | chr8_3:26545658-26545677 | Msa1284350:five_prime_UTR | 25.0% |
| ! | AAAACCATTTCTACTTTACA+GGG | - | chr8_3:26545659-26545678 | Msa1284350:five_prime_UTR | 25.0% |
| ! | AATTCAAAAGACAATGAAAG+TGG | + | chr8_3:26545691-26545710 | None:intergenic | 25.0% |
| ! | GTTTTTGTGAGCTATATTGT+AGG | - | chr8_3:26538680-26538699 | Msa1284350:intron | 30.0% |
| TTACGAGAACTTAAAGAAAC+AGG | + | chr8_3:26538749-26538768 | None:intergenic | 30.0% | |
| AGTTAATCCAAAAAGGAATG+AGG | - | chr8_3:26538809-26538828 | Msa1284350:three_prime_UTR | 30.0% | |
| ! | GGAGAAAATGAAGTATGTTT+TGG | - | chr8_3:26538961-26538980 | Msa1284350:CDS | 30.0% |
| CGAGTTACTTCTATCAAAAT+TGG | - | chr8_3:26539064-26539083 | Msa1284350:CDS | 30.0% | |
| AGTGAGAATTCAATTCTAAG+GGG | + | chr8_3:26539097-26539116 | None:intergenic | 30.0% | |
| !! | TCTTTTTGAGCTGATAAAGT+CGG | - | chr8_3:26539222-26539241 | Msa1284350:intron | 30.0% |
| CTATACAAATATTCGAAAGC+AGG | + | chr8_3:26539389-26539408 | None:intergenic | 30.0% | |
| ! | GAATCTTATTTGTTCCTTTC+AGG | - | chr8_3:26539954-26539973 | Msa1284350:CDS | 30.0% |
| !!! | TGGAAACTATGAACGTTTTT+TGG | - | chr8_3:26540210-26540229 | Msa1284350:intron | 30.0% |
| CACAACTGGAAAAATTTATC+AGG | - | chr8_3:26540261-26540280 | Msa1284350:intron | 30.0% | |
| AACTGGAAAAATTTATCAGG+TGG | - | chr8_3:26540264-26540283 | Msa1284350:intron | 30.0% | |
| CCATAACAAATAAATTCGGA+AGG | + | chr8_3:26540473-26540492 | None:intergenic | 30.0% | |
| ! | CCTTCCGAATTTATTTGTTA+TGG | - | chr8_3:26540470-26540489 | Msa1284350:intron | 30.0% |
| ! | TGATGTTTGTGTCATTGAAT+TGG | - | chr8_3:26540625-26540644 | Msa1284350:CDS | 30.0% |
| ! | GATGTTTGTGTCATTGAATT+GGG | - | chr8_3:26540626-26540645 | Msa1284350:CDS | 30.0% |
| TAAAACTAACTGCAACATAC+TGG | - | chr8_3:26540799-26540818 | Msa1284350:CDS | 30.0% | |
| ACTTTCCGAATCATAAAATC+AGG | - | chr8_3:26540912-26540931 | Msa1284350:CDS | 30.0% | |
| ! | ACAAGCCTGATTTTATGATT+CGG | + | chr8_3:26540920-26540939 | None:intergenic | 30.0% |
| TGCAAACTGTATTCTATCAA+TGG | - | chr8_3:26541263-26541282 | Msa1284350:intron | 30.0% | |
| GGTTCTCAGAAATAATATGA+TGG | - | chr8_3:26541471-26541490 | Msa1284350:intron | 30.0% | |
| ATTTGTATTTGTTCCTTACC+AGG | - | chr8_3:26541497-26541516 | Msa1284350:intron | 30.0% | |
| ! | GAACTTGATGATAATGTCAA+GGG | - | chr8_3:26541519-26541538 | Msa1284350:intron | 30.0% |
| TTACTTACTCTTAACAGCAA+AGG | + | chr8_3:26541718-26541737 | None:intergenic | 30.0% | |
| ! | TAATATCTCTTTTGCCTAGA+TGG | - | chr8_3:26541766-26541785 | Msa1284350:intron | 30.0% |
| GAAATTCAATTCAACCATCT+AGG | + | chr8_3:26541783-26541802 | None:intergenic | 30.0% | |
| ! | CTTGAAGGTTTAATGTTTTC+AGG | + | chr8_3:26541896-26541915 | None:intergenic | 30.0% |
| CTGAAAACATTAAACCTTCA+AGG | - | chr8_3:26541894-26541913 | Msa1284350:intron | 30.0% | |
| !! | TGACAAACTCATTCTTGTTT+TGG | - | chr8_3:26541924-26541943 | Msa1284350:intron | 30.0% |
| ! | AATCTCTAAAAATCAACACC+GGG | + | chr8_3:26541992-26542011 | None:intergenic | 30.0% |
| CACAAATTTCATGAATCTGT+AGG | - | chr8_3:26542135-26542154 | Msa1284350:intron | 30.0% | |
| TAACCTGTGAAGAACATAAT+AGG | + | chr8_3:26542248-26542267 | None:intergenic | 30.0% | |
| TGCATATCTATCTGTATTGA+AGG | - | chr8_3:26542305-26542324 | Msa1284350:intron | 30.0% | |
| GTGAGATTTCTCATCTAAAA+TGG | - | chr8_3:26542409-26542428 | Msa1284350:CDS | 30.0% | |
| TCTTGAGTTTAGATACACTT+AGG | - | chr8_3:26542517-26542536 | Msa1284350:intron | 30.0% | |
| ATGATTTATATGGATGGCTT+TGG | - | chr8_3:26542839-26542858 | Msa1284350:intron | 30.0% | |
| TGATTTATATGGATGGCTTT+GGG | - | chr8_3:26542840-26542859 | Msa1284350:intron | 30.0% | |
| !!! | ATAAAATTGGTCTTTTGTGC+AGG | - | chr8_3:26542905-26542924 | Msa1284350:CDS | 30.0% |
| TTCAGTTATTACCTCTTTCA+AGG | + | chr8_3:26543009-26543028 | None:intergenic | 30.0% | |
| TAAATTAATCATCAGAGGCT+TGG | + | chr8_3:26543081-26543100 | None:intergenic | 30.0% | |
| !! | TTCAAGGAGAACTTATTTTC+AGG | - | chr8_3:26543656-26543675 | Msa1284350:CDS | 30.0% |
| GCATATGTTATCATCTATTG+AGG | - | chr8_3:26543755-26543774 | Msa1284350:intron | 30.0% | |
| ACAAATGAGATATAGATGTC+TGG | + | chr8_3:26543919-26543938 | None:intergenic | 30.0% | |
| !!! | GCTATATTTTAATTTTGGGC+AGG | - | chr8_3:26543942-26543961 | Msa1284350:intron | 30.0% |
| !!! | ATTTTAATTTTGGGCAGGTA+TGG | - | chr8_3:26543947-26543966 | Msa1284350:intron | 30.0% |
| AACTATCTGCAATTGTATCA+TGG | + | chr8_3:26544277-26544296 | None:intergenic | 30.0% | |
| AGAAAAATACCTGAGAATAG+TGG | + | chr8_3:26544375-26544394 | None:intergenic | 30.0% | |
| CATTTAACAACTGACGAAAA+AGG | + | chr8_3:26544457-26544476 | None:intergenic | 30.0% | |
| GAATACCTTATTGTAACAAC+AGG | - | chr8_3:26545174-26545193 | Msa1284350:intron | 30.0% | |
| ! | GCAGTTGTTTCAAATAACAA+AGG | - | chr8_3:26545222-26545241 | Msa1284350:intron | 30.0% |
| GGAAATGCAAATTTAACCAA+TGG | - | chr8_3:26545243-26545262 | Msa1284350:CDS | 30.0% | |
| AGCACAATTGTAAGCTAAAA+AGG | + | chr8_3:26545400-26545419 | None:intergenic | 30.0% | |
| ! | TTTAGCTTACAATTGTGCTT+TGG | - | chr8_3:26545401-26545420 | Msa1284350:five_prime_UTR | 30.0% |
| ! | TCCAAACACATTTTTGTCTT+TGG | - | chr8_3:26545429-26545448 | Msa1284350:five_prime_UTR | 30.0% |
| ACCAAAGACAAAAATGTGTT+TGG | + | chr8_3:26545433-26545452 | None:intergenic | 30.0% | |
| ! | TTTCAGCATGAAGCAAATTT+TGG | - | chr8_3:26545514-26545533 | Msa1284350:five_prime_UTR | 30.0% |
| ! | TTCAGCATGAAGCAAATTTT+GGG | - | chr8_3:26545515-26545534 | Msa1284350:five_prime_UTR | 30.0% |
| !!! | TTTTGTTTTGGCTCTTACAT+TGG | - | chr8_3:26545586-26545605 | Msa1284350:five_prime_UTR | 30.0% |
| ! | TTTTCCCTGTAAAGTAGAAA+TGG | + | chr8_3:26545666-26545685 | None:intergenic | 30.0% |
| GAGCTATATTGTAGGGTTTA+TGG | - | chr8_3:26538688-26538707 | Msa1284350:intron | 35.0% | |
| !!! | ATGAAGTATGTTTTGGTGAC+TGG | - | chr8_3:26538968-26538987 | Msa1284350:CDS | 35.0% |
| GATTGCAATGCGAATTACTA+CGG | - | chr8_3:26539147-26539166 | Msa1284350:intron | 35.0% | |
| !! | TCTTTTTGAGCCGATAAAGT+CGG | - | chr8_3:26539272-26539291 | Msa1284350:intron | 35.0% |
| !! | CAAGTTTCTACCGACTTTAT+CGG | + | chr8_3:26539285-26539304 | None:intergenic | 35.0% |
| ! | GTTTTGCAGGTAATTGTGTA+TGG | + | chr8_3:26539530-26539549 | None:intergenic | 35.0% |
| ! | GTTACTTCACAATGTTTTGC+AGG | + | chr8_3:26539543-26539562 | None:intergenic | 35.0% |
| ATGTTGTCAATTGCAGATTG+CGG | + | chr8_3:26539617-26539636 | None:intergenic | 35.0% | |
| AATAAGATTCATCCCATGAC+AGG | + | chr8_3:26539944-26539963 | None:intergenic | 35.0% | |
| GATGCCACGTTATCAAAAAT+TGG | + | chr8_3:26540011-26540030 | None:intergenic | 35.0% | |
| GTTCATAGTTTCCAAGATCA+AGG | + | chr8_3:26540204-26540223 | None:intergenic | 35.0% | |
| ! | CGCTTTCGGTTTCTTAATTT+TGG | - | chr8_3:26540349-26540368 | Msa1284350:intron | 35.0% |
| GTAATAGTCTGTTGTTGAGA+AGG | - | chr8_3:26540388-26540407 | Msa1284350:intron | 35.0% | |
| GAAAGAAGAGGAGATTATCT+TGG | - | chr8_3:26540410-26540429 | Msa1284350:intron | 35.0% | |
| ATTGAATTGGGTGGAACTAT+AGG | - | chr8_3:26540638-26540657 | Msa1284350:CDS | 35.0% | |
| ! | GGTTACAAAGTGGATTTATG+TGG | + | chr8_3:26540773-26540792 | None:intergenic | 35.0% |
| TATGACAAACATTACCTACG+CGG | + | chr8_3:26541076-26541095 | None:intergenic | 35.0% | |
| TCAGTATACTATAAGGTCTC+AGG | + | chr8_3:26541099-26541118 | None:intergenic | 35.0% | |
| TCACCAACAACATTAAGAAC+AGG | + | chr8_3:26541233-26541252 | None:intergenic | 35.0% | |
| ! | TCTTAATGTTGTTGGTGAAC+AGG | - | chr8_3:26541235-26541254 | Msa1284350:intron | 35.0% |
| TTATCATCAAGTTCCTGGTA+AGG | + | chr8_3:26541513-26541532 | None:intergenic | 35.0% | |
| TGACATTATCATCAAGTTCC+TGG | + | chr8_3:26541518-26541537 | None:intergenic | 35.0% | |
| ! | GGAACTTGATGATAATGTCA+AGG | - | chr8_3:26541518-26541537 | Msa1284350:intron | 35.0% |
| ! | TTCTCAATTTTGTCATGTGC+CGG | - | chr8_3:26541548-26541567 | Msa1284350:intron | 35.0% |
| TCTGTGATGTTCCAAATATC+TGG | - | chr8_3:26541686-26541705 | Msa1284350:intron | 35.0% | |
| AAAGGAATGTGCCAGATATT+TGG | + | chr8_3:26541700-26541719 | None:intergenic | 35.0% | |
| TTGTTATGAATAGGACCAGA+AGG | - | chr8_3:26541857-26541876 | Msa1284350:intron | 35.0% | |
| TTTGTCAAACAAACCCTTGA+AGG | + | chr8_3:26541911-26541930 | None:intergenic | 35.0% | |
| GGATAAGGATTTCTTTATGG+GGG | + | chr8_3:26541971-26541990 | None:intergenic | 35.0% | |
| GGGATAAGGATTTCTTTATG+GGG | + | chr8_3:26541972-26541991 | None:intergenic | 35.0% | |
| CGGGATAAGGATTTCTTTAT+GGG | + | chr8_3:26541973-26541992 | None:intergenic | 35.0% | |
| CCATAAAGAAATCCTTATCC+CGG | - | chr8_3:26541971-26541990 | Msa1284350:intron | 35.0% | |
| TAAAAATCAACACCGGGATA+AGG | + | chr8_3:26541986-26542005 | None:intergenic | 35.0% | |
| TGAAGAACATAATAGGTGTG+AGG | + | chr8_3:26542241-26542260 | None:intergenic | 35.0% | |
| ACACCTATTATGTTCTTCAC+AGG | - | chr8_3:26542242-26542261 | Msa1284350:intron | 35.0% | |
| TTCACAGGTTAGAATTGCAA+TGG | - | chr8_3:26542257-26542276 | Msa1284350:intron | 35.0% | |
| CAGATAGATATGCATCTGAA+AGG | + | chr8_3:26542299-26542318 | None:intergenic | 35.0% | |
| TCACAAGTATCCCTGAAATT+TGG | + | chr8_3:26542626-26542645 | None:intergenic | 35.0% | |
| !! | ACTAAGTTTGTTGTGAGGAT+AGG | - | chr8_3:26542773-26542792 | Msa1284350:intron | 35.0% |
| TTTCAAGAATAGAACCTCAC+TGG | + | chr8_3:26542799-26542818 | None:intergenic | 35.0% | |
| TGAAGATGATACCTTGAAAG+AGG | - | chr8_3:26542995-26543014 | Msa1284350:intron | 35.0% | |
| ATCCTCAGATGTTACCTAAA+TGG | - | chr8_3:26543256-26543275 | Msa1284350:CDS | 35.0% | |
| TCCTCAGATGTTACCTAAAT+GGG | - | chr8_3:26543257-26543276 | Msa1284350:CDS | 35.0% | |
| !! | CTAAATGGGTTTTCATTGCA+GGG | - | chr8_3:26543271-26543290 | Msa1284350:intron | 35.0% |
| !! | TGCTAATGGAATTCTAGTTC+CGG | - | chr8_3:26543294-26543313 | Msa1284350:intron | 35.0% |
| AGAAAACAATGTTCCGTTTC+TGG | - | chr8_3:26543372-26543391 | Msa1284350:intron | 35.0% | |
| GAAAACAATGTTCCGTTTCT+GGG | - | chr8_3:26543373-26543392 | Msa1284350:intron | 35.0% | |
| TGAATTTGCAAGATCTGTTC+TGG | - | chr8_3:26543426-26543445 | Msa1284350:intron | 35.0% | |
| GAATTTGCAAGATCTGTTCT+GGG | - | chr8_3:26543427-26543446 | Msa1284350:intron | 35.0% | |
| ! | TTTGGTTTCGGGATCAAATT+CGG | + | chr8_3:26543473-26543492 | None:intergenic | 35.0% |
| !!! | ACACAAGGATTTTTGGTTTC+GGG | + | chr8_3:26543484-26543503 | None:intergenic | 35.0% |
| !!! | GACACAAGGATTTTTGGTTT+CGG | + | chr8_3:26543485-26543504 | None:intergenic | 35.0% |
| AGTATCAGCAAACATACTTC+GGG | + | chr8_3:26543517-26543536 | None:intergenic | 35.0% | |
| GAGTATCAGCAAACATACTT+CGG | + | chr8_3:26543518-26543537 | None:intergenic | 35.0% | |
| ATAGGGTTCAAAGACACATA+TGG | - | chr8_3:26543614-26543633 | Msa1284350:intron | 35.0% | |
| TAGGGTTCAAAGACACATAT+GGG | - | chr8_3:26543615-26543634 | Msa1284350:intron | 35.0% | |
| TCAACATTGTTCATGTGCAA+TGG | - | chr8_3:26544057-26544076 | Msa1284350:CDS | 35.0% | |
| ! | TCAAGTTGTGATATCATGTC+AGG | + | chr8_3:26544105-26544124 | None:intergenic | 35.0% |
| TATCTGCAATTGTATCATGG+AGG | + | chr8_3:26544274-26544293 | None:intergenic | 35.0% | |
| TAGGAGAATGAAAAGTGACA+CGG | + | chr8_3:26544410-26544429 | None:intergenic | 35.0% | |
| ! | AGAACATCATTCGGTGAAAT+GGG | + | chr8_3:26544849-26544868 | None:intergenic | 35.0% |
| ATTTCACCGAATGATGTTCT+GGG | - | chr8_3:26544849-26544868 | Msa1284350:intron | 35.0% | |
| ATGAAGAATCTGTATTCCCT+AGG | - | chr8_3:26544979-26544998 | Msa1284350:intron | 35.0% | |
| ! | ATTCATTTAGAGTGCATCGA+TGG | + | chr8_3:26545158-26545177 | None:intergenic | 35.0% |
| AATAGAAGCAGCATGTAAGA+AGG | - | chr8_3:26545200-26545219 | Msa1284350:intron | 35.0% | |
| ! | TCGAAAGCACAAAATGCAAA+TGG | - | chr8_3:26545291-26545310 | Msa1284350:CDS | 35.0% |
| ! | CGAAAGCACAAAATGCAAAT+GGG | - | chr8_3:26545292-26545311 | Msa1284350:CDS | 35.0% |
| ! | AATGGGTTCATATCTTCCAA+TGG | - | chr8_3:26545309-26545328 | Msa1284350:CDS | 35.0% |
| AACGGTGTTTAAGTGGAATA+GGG | - | chr8_3:26545360-26545379 | Msa1284350:five_prime_UTR | 35.0% | |
| AGCATATTAGGTGAAGCTTA+TGG | - | chr8_3:26545556-26545575 | Msa1284350:five_prime_UTR | 35.0% | |
| ! | CTCATCACCTCATTCCTTTT+TGG | + | chr8_3:26538819-26538838 | None:intergenic | 40.0% |
| !!! | TGGTTTTGTGCATGTTGCAT+AGG | - | chr8_3:26538897-26538916 | Msa1284350:three_prime_UTR | 40.0% |
| CATAGGATAAGCAGCTAAAG+AGG | - | chr8_3:26538914-26538933 | Msa1284350:three_prime_UTR | 40.0% | |
| !!! | AAGTATGTTTTGGTGACTGG+TGG | - | chr8_3:26538971-26538990 | Msa1284350:CDS | 40.0% |
| ! | GCATTTTTACGTATCCGAGT+TGG | - | chr8_3:26539176-26539195 | Msa1284350:intron | 40.0% |
| CGATAAAGTCGGTAGAAACT+TGG | - | chr8_3:26539283-26539302 | Msa1284350:intron | 40.0% | |
| TTGCAGGTAATTGTGTATGG+AGG | + | chr8_3:26539527-26539546 | None:intergenic | 40.0% | |
| ! | ACAATGTCTCCTTTTGAGCA+TGG | - | chr8_3:26539850-26539869 | Msa1284350:intron | 40.0% |
| ! | CAATGTCTCCTTTTGAGCAT+GGG | - | chr8_3:26539851-26539870 | Msa1284350:intron | 40.0% |
| ! | AATGTCTCCTTTTGAGCATG+GGG | - | chr8_3:26539852-26539871 | Msa1284350:intron | 40.0% |
| ! | GAGGTGTTTGTGTTAGATGA+TGG | - | chr8_3:26539874-26539893 | Msa1284350:intron | 40.0% |
| ! | GTGTTTGTGTTAGATGATGG+TGG | - | chr8_3:26539877-26539896 | Msa1284350:intron | 40.0% |
| GTTCCTTTCAGGCATTAAGT+TGG | - | chr8_3:26539965-26539984 | Msa1284350:CDS | 40.0% | |
| TCACCAACTTAATGCCTGAA+AGG | + | chr8_3:26539971-26539990 | None:intergenic | 40.0% | |
| TTGAAGGTTGACCTTGATCT+TGG | - | chr8_3:26540190-26540209 | Msa1284350:CDS | 40.0% | |
| CGCGACAATAATATCACAAC+TGG | - | chr8_3:26540247-26540266 | Msa1284350:intron | 40.0% | |
| !! | TCGTTTACTAAGAGCGCTTT+CGG | - | chr8_3:26540335-26540354 | Msa1284350:intron | 40.0% |
| GTTGTTGAGAAGGAAAGAAG+AGG | - | chr8_3:26540398-26540417 | Msa1284350:intron | 40.0% | |
| TTATCTTGGCAAAACTGTCC+AGG | - | chr8_3:26540424-26540443 | Msa1284350:intron | 40.0% | |
| AACTGTCCAGGTATGTTTAG+TGG | - | chr8_3:26540436-26540455 | Msa1284350:intron | 40.0% | |
| TCAGAACCACTAAACATACC+TGG | + | chr8_3:26540445-26540464 | None:intergenic | 40.0% | |
| TGTTATGGTTGTTTGTCCCT+TGG | - | chr8_3:26540485-26540504 | Msa1284350:intron | 40.0% | |
| ATTACCTCCGCTGTATTCAT+AGG | - | chr8_3:26540520-26540539 | Msa1284350:intron | 40.0% | |
| GGAACAACCTATGAATACAG+CGG | + | chr8_3:26540530-26540549 | None:intergenic | 40.0% | |
| CAATGACACAAACATCAGCA+GGG | + | chr8_3:26540622-26540641 | None:intergenic | 40.0% | |
| TCAATGACACAAACATCAGC+AGG | + | chr8_3:26540623-26540642 | None:intergenic | 40.0% | |
| ! | GTTTGTGTCATTGAATTGGG+TGG | - | chr8_3:26540629-26540648 | Msa1284350:CDS | 40.0% |
| GCAACATACTGGATTCTCAT+TGG | - | chr8_3:26540810-26540829 | Msa1284350:CDS | 40.0% | |
| CCTCAGCATTTAGAGAAAAC+AGG | + | chr8_3:26540874-26540893 | None:intergenic | 40.0% | |
| ! | CCTGTTTTCTCTAAATGCTG+AGG | - | chr8_3:26540871-26540890 | Msa1284350:CDS | 40.0% |
| ! | ATGCCCTTTATTGAAGCACT+TGG | - | chr8_3:26541038-26541057 | Msa1284350:intron | 40.0% |
| TGGCCAAGTGCTTCAATAAA+GGG | + | chr8_3:26541044-26541063 | None:intergenic | 40.0% | |
| TTGGCCAAGTGCTTCAATAA+AGG | + | chr8_3:26541045-26541064 | None:intergenic | 40.0% | |
| GAACCAAACAGAAGTTGCTA+GGG | + | chr8_3:26541196-26541215 | None:intergenic | 40.0% | |
| TGAACCAAACAGAAGTTGCT+AGG | + | chr8_3:26541197-26541216 | None:intergenic | 40.0% | |
| GTGCCTGTTCTTAATGTTGT+TGG | - | chr8_3:26541227-26541246 | Msa1284350:intron | 40.0% | |
| TGCGACAAGCAAGAAGATTT+GGG | + | chr8_3:26541403-26541422 | None:intergenic | 40.0% | |
| AAGGTCTGTCTCTTGATCTT+TGG | - | chr8_3:26541428-26541447 | Msa1284350:intron | 40.0% | |
| ! | GTTTTTCTTTTCAGCACTGC+TGG | - | chr8_3:26541450-26541469 | Msa1284350:intron | 40.0% |
| AGGATTTCTTTATGGGGGTA+GGG | + | chr8_3:26541966-26541985 | None:intergenic | 40.0% | |
| AAGGATTTCTTTATGGGGGT+AGG | + | chr8_3:26541967-26541986 | None:intergenic | 40.0% | |
| CCGGGATAAGGATTTCTTTA+TGG | + | chr8_3:26541974-26541993 | None:intergenic | 40.0% | |
| ! | TGCTACAGAGCCTGATTTTA+AGG | - | chr8_3:26542086-26542105 | Msa1284350:intron | 40.0% |
| GGTCAATAGATAGCACTGTT+CGG | + | chr8_3:26542220-26542239 | None:intergenic | 40.0% | |
| ACAGGTTAGAATTGCAATGG+TGG | - | chr8_3:26542260-26542279 | Msa1284350:intron | 40.0% | |
| CAGGTTAGAATTGCAATGGT+GGG | - | chr8_3:26542261-26542280 | Msa1284350:intron | 40.0% | |
| ! | GCAATGGTGGGAAAATATAC+TGG | - | chr8_3:26542273-26542292 | Msa1284350:intron | 40.0% |
| !! | CTCTGACTAAGTTTGTTGTG+AGG | - | chr8_3:26542768-26542787 | Msa1284350:CDS | 40.0% |
| ! | CAAGCAGCTTTATATGCATC+AGG | + | chr8_3:26543117-26543136 | None:intergenic | 40.0% |
| CTGATGCATATAAAGCTGCT+TGG | - | chr8_3:26543115-26543134 | Msa1284350:intron | 40.0% | |
| ACCCATTTAGGTAACATCTG+AGG | + | chr8_3:26543261-26543280 | None:intergenic | 40.0% | |
| CCTGCAATGAAAACCCATTT+AGG | + | chr8_3:26543273-26543292 | None:intergenic | 40.0% | |
| !! | CCTAAATGGGTTTTCATTGC+AGG | - | chr8_3:26543270-26543289 | Msa1284350:intron | 40.0% |
| !! | TTTTCATTGCAGGGTGCTAA+TGG | - | chr8_3:26543280-26543299 | Msa1284350:intron | 40.0% |
| !! | GCTAATGGAATTCTAGTTCC+GGG | - | chr8_3:26543295-26543314 | Msa1284350:intron | 40.0% |
| TCGGGCATAAATATGACACA+AGG | + | chr8_3:26543499-26543518 | None:intergenic | 40.0% | |
| CACTACTAACCTCGTATCTA+TGG | + | chr8_3:26544003-26544022 | None:intergenic | 40.0% | |
| ACATTGTTCATGTGCAATGG+TGG | - | chr8_3:26544060-26544079 | Msa1284350:CDS | 40.0% | |
| ATATCACAACTTGAGACTGC+TGG | - | chr8_3:26544111-26544130 | Msa1284350:intron | 40.0% | |
| !! | ACTGCTGGTCTAACTTTTGT+TGG | - | chr8_3:26544126-26544145 | Msa1284350:intron | 40.0% |
| TTTGTTGGCAAAGACGAAAC+TGG | - | chr8_3:26544141-26544160 | Msa1284350:intron | 40.0% | |
| TTGTTGGCAAAGACGAAACT+GGG | - | chr8_3:26544142-26544161 | Msa1284350:intron | 40.0% | |
| TTGCAGATAGTTGAAATGCG+TGG | - | chr8_3:26544285-26544304 | Msa1284350:intron | 40.0% | |
| CGTGGTCATCCTTTCTTTAT+CGG | - | chr8_3:26544303-26544322 | Msa1284350:intron | 40.0% | |
| !! | AACTGAGCACCGATAAAGAA+AGG | + | chr8_3:26544315-26544334 | None:intergenic | 40.0% |
| AAACCTTCTCCACTATTCTC+AGG | - | chr8_3:26544363-26544382 | Msa1284350:intron | 40.0% | |
| ! | ATACCTGAGAATAGTGGAGA+AGG | + | chr8_3:26544369-26544388 | None:intergenic | 40.0% |
| ! | GGATTACAAAGGCATGAACT+AGG | + | chr8_3:26544429-26544448 | None:intergenic | 40.0% |
| AAAAGGTGAGGGGATTACAA+AGG | + | chr8_3:26544440-26544459 | None:intergenic | 40.0% | |
| ACAACTGACGAAAAAGGTGA+GGG | + | chr8_3:26544451-26544470 | None:intergenic | 40.0% | |
| AACAACTGACGAAAAAGGTG+AGG | + | chr8_3:26544452-26544471 | None:intergenic | 40.0% | |
| ! | CAGAACATCATTCGGTGAAA+TGG | + | chr8_3:26544850-26544869 | None:intergenic | 40.0% |
| CATTTCACCGAATGATGTTC+TGG | - | chr8_3:26544848-26544867 | Msa1284350:intron | 40.0% | |
| TTTCACCGAATGATGTTCTG+GGG | - | chr8_3:26544850-26544869 | Msa1284350:intron | 40.0% | |
| CTATTCCCCAGAACATCATT+CGG | + | chr8_3:26544858-26544877 | None:intergenic | 40.0% | |
| GAATCTGTATTCCCTAGGTT+TGG | - | chr8_3:26544984-26545003 | Msa1284350:intron | 40.0% | |
| GATTCAATGGAGCACATGAA+AGG | + | chr8_3:26545096-26545115 | None:intergenic | 40.0% | |
| GTGTGATTCATGTACTCCAT+TGG | + | chr8_3:26545262-26545281 | None:intergenic | 40.0% | |
| ! | GCATTTTGTGCTTTCGAAGT+TGG | + | chr8_3:26545288-26545307 | None:intergenic | 40.0% |
| ! | TCTTCCAATGGTTCTGCAAA+TGG | - | chr8_3:26545321-26545340 | Msa1284350:CDS | 40.0% |
| ACTTAAACACCGTTGCCATT+AGG | + | chr8_3:26545354-26545373 | None:intergenic | 40.0% | |
| TAATGGCAACGGTGTTTAAG+TGG | - | chr8_3:26545353-26545372 | Msa1284350:five_prime_UTR | 40.0% | |
| CAACGGTGTTTAAGTGGAAT+AGG | - | chr8_3:26545359-26545378 | Msa1284350:five_prime_UTR | 40.0% | |
| !! | GTTAGCTTGTACAGTTTGAG+TGG | - | chr8_3:26545451-26545470 | Msa1284350:five_prime_UTR | 40.0% |
| !! | GTTGTTAGTGGACTTGGCAA+AGG | - | chr8_3:26538995-26539014 | Msa1284350:CDS | 45.0% |
| TTTGAGCTGATAAAGTCGGC+TGG | - | chr8_3:26539226-26539245 | Msa1284350:intron | 45.0% | |
| CAGGTAATTGTGTATGGAGG+AGG | + | chr8_3:26539524-26539543 | None:intergenic | 45.0% | |
| !! | TGTGTTAGATGATGGTGGTG+AGG | - | chr8_3:26539882-26539901 | Msa1284350:intron | 45.0% |
| ACAACCTATGAATACAGCGG+AGG | + | chr8_3:26540527-26540546 | None:intergenic | 45.0% | |
| TGGATAGCATCTGTGATGTG+TGG | + | chr8_3:26540551-26540570 | None:intergenic | 45.0% | |
| TCACAGATGCTATCCAAGAG+TGG | - | chr8_3:26540555-26540574 | Msa1284350:intron | 45.0% | |
| CTACACGTTCTATCCACTCT+TGG | + | chr8_3:26540571-26540590 | None:intergenic | 45.0% | |
| !! | GTACCGGTTGATGGAAAAGA+AGG | - | chr8_3:26540596-26540615 | Msa1284350:intron | 45.0% |
| TATAGCGAGTTCTCATCGGA+TGG | + | chr8_3:26540747-26540766 | None:intergenic | 45.0% | |
| GCGATATAGCGAGTTCTCAT+CGG | + | chr8_3:26540751-26540770 | None:intergenic | 45.0% | |
| TACCTACGCGGTACGAAAAT+TGG | + | chr8_3:26541064-26541083 | None:intergenic | 45.0% | |
| !! | GGTTGGCTGTTCTTTTGCTA+AGG | - | chr8_3:26541137-26541156 | Msa1284350:intron | 45.0% |
| CAACATTAAGAACAGGCACG+AGG | + | chr8_3:26541226-26541245 | None:intergenic | 45.0% | |
| ACAGTGTCCGTCAACTTAGA+GGG | - | chr8_3:26541366-26541385 | Msa1284350:intron | 45.0% | |
| TCCGTCAACTTAGAGGGTTA+GGG | - | chr8_3:26541372-26541391 | Msa1284350:intron | 45.0% | |
| ! | ACCCTAACCCTCTAAGTTGA+CGG | + | chr8_3:26541376-26541395 | None:intergenic | 45.0% |
| CTGCGACAAGCAAGAAGATT+TGG | + | chr8_3:26541404-26541423 | None:intergenic | 45.0% | |
| TCTTGCTTGTCGCAGTTCAA+AGG | - | chr8_3:26541409-26541428 | Msa1284350:intron | 45.0% | |
| GTGATCCACGCCTTAAAATC+AGG | + | chr8_3:26542099-26542118 | None:intergenic | 45.0% | |
| ATAGATAGCACTGTTCGGCA+AGG | + | chr8_3:26542215-26542234 | None:intergenic | 45.0% | |
| AGTGTACAGACACGACGTTA+CGG | - | chr8_3:26542695-26542714 | Msa1284350:intron | 45.0% | |
| ACGTTACGGTCGTAGTCAAT+GGG | - | chr8_3:26542709-26542728 | Msa1284350:intron | 45.0% | |
| TCGTAGTCAATGGGTAGTCA+AGG | - | chr8_3:26542718-26542737 | Msa1284350:intron | 45.0% | |
| CGTAGTCAATGGGTAGTCAA+GGG | - | chr8_3:26542719-26542738 | Msa1284350:intron | 45.0% | |
| TCAATGGGTAGTCAAGGGAA+CGG | - | chr8_3:26542724-26542743 | Msa1284350:intron | 45.0% | |
| !! | AATGGAATTCTAGTTCCGGG+AGG | - | chr8_3:26543298-26543317 | Msa1284350:intron | 45.0% |
| !!! | ATTCTAGTTCCGGGAGGTTT+TGG | - | chr8_3:26543304-26543323 | Msa1284350:intron | 45.0% |
| ! | TTTGGTGATAGAGGAGTGCA+AGG | - | chr8_3:26543322-26543341 | Msa1284350:intron | 45.0% |
| ! | TTGGTGATAGAGGAGTGCAA+GGG | - | chr8_3:26543323-26543342 | Msa1284350:intron | 45.0% |
| GGTTCAAAGACACATATGGG+TGG | - | chr8_3:26543618-26543637 | Msa1284350:intron | 45.0% | |
| CAATGGTGGTTGTACTGTAC+AGG | - | chr8_3:26544074-26544093 | Msa1284350:CDS | 45.0% | |
| ! | AATAGTGGAGAAGGTTTCCC+TGG | + | chr8_3:26544360-26544379 | None:intergenic | 45.0% |
| CAACTGACGAAAAAGGTGAG+GGG | + | chr8_3:26544450-26544469 | None:intergenic | 45.0% | |
| CCATCAAAGTAGAGAAGACC+AGG | + | chr8_3:26544531-26544550 | None:intergenic | 45.0% | |
| ! | CCTGGTCTTCTCTACTTTGA+TGG | - | chr8_3:26544528-26544547 | Msa1284350:intron | 45.0% |
| CTGGGGAATAGATCCTGATA+AGG | - | chr8_3:26544867-26544886 | Msa1284350:intron | 45.0% | |
| CTGTATTCCCTAGGTTTGGA+TGG | - | chr8_3:26544988-26545007 | Msa1284350:intron | 45.0% | |
| ATTCCCTAGGTTTGGATGGT+TGG | - | chr8_3:26544992-26545011 | Msa1284350:intron | 45.0% | |
| TGACCAACCATCCAAACCTA+GGG | + | chr8_3:26544998-26545017 | None:intergenic | 45.0% | |
| TTGACCAACCATCCAAACCT+AGG | + | chr8_3:26544999-26545018 | None:intergenic | 45.0% | |
| TGCACCATTTGCAGAACCAT+TGG | + | chr8_3:26545328-26545347 | None:intergenic | 45.0% | |
| GCAAATGGTGCAAGTCCTAA+TGG | - | chr8_3:26545336-26545355 | Msa1284350:exon | 45.0% | |
| GCTTGTACAGTTTGAGTGGT+TGG | - | chr8_3:26545455-26545474 | Msa1284350:five_prime_UTR | 45.0% | |
| !! | TAAAATAATTACTAATAAAA+AGG | + | chr8_3:26539769-26539788 | None:intergenic | 5.0% |
| GTGACTGGTGGAGTTGTTAG+TGG | - | chr8_3:26538983-26539002 | Msa1284350:CDS | 50.0% | |
| !! | GGTGGAGTTGTTAGTGGACT+TGG | - | chr8_3:26538989-26539008 | Msa1284350:CDS | 50.0% |
| ! | CAGCATTGGAGTACTCCTTC+AGG | - | chr8_3:26539030-26539049 | Msa1284350:CDS | 50.0% |
| !! | ACGTATCCGAGTTGGTGTGA+AGG | - | chr8_3:26539184-26539203 | Msa1284350:intron | 50.0% |
| TCCTCTCCTTCACACCAACT+CGG | + | chr8_3:26539193-26539212 | None:intergenic | 50.0% | |
| AGTCGGCTGGTATGAAGTAG+AGG | - | chr8_3:26539239-26539258 | Msa1284350:intron | 50.0% | |
| CGGTAGAAACTTGGCCTGTT+TGG | - | chr8_3:26539292-26539311 | Msa1284350:intron | 50.0% | |
| CCTGCATCAGTGTTCAGGTA+GGG | + | chr8_3:26539829-26539848 | None:intergenic | 50.0% | |
| CCTACCTGAACACTGATGCA+GGG | - | chr8_3:26539827-26539846 | Msa1284350:intron | 50.0% | |
| TTGTCCCTGCATCAGTGTTC+AGG | + | chr8_3:26539834-26539853 | None:intergenic | 50.0% | |
| AACACCTCCCCATGCTCAAA+AGG | + | chr8_3:26539862-26539881 | None:intergenic | 50.0% | |
| GTGGATAGAACGTGTAGCAC+AGG | - | chr8_3:26540574-26540593 | Msa1284350:intron | 50.0% | |
| AGAACGTGTAGCACAGGTAC+CGG | - | chr8_3:26540580-26540599 | Msa1284350:intron | 50.0% | |
| ! | GGGCCTTCTTTTCCATCAAC+CGG | + | chr8_3:26540602-26540621 | None:intergenic | 50.0% |
| AGGCCCTAGCAACTTCTGTT+TGG | - | chr8_3:26541190-26541209 | Msa1284350:intron | 50.0% | |
| ! | AAGTTGACGGACACTGTGCT+GGG | + | chr8_3:26541363-26541382 | None:intergenic | 50.0% |
| ! | TAAGTTGACGGACACTGTGC+TGG | + | chr8_3:26541364-26541383 | None:intergenic | 50.0% |
| CACAGTGTCCGTCAACTTAG+AGG | - | chr8_3:26541365-26541384 | Msa1284350:intron | 50.0% | |
| GTCCGTCAACTTAGAGGGTT+AGG | - | chr8_3:26541371-26541390 | Msa1284350:intron | 50.0% | |
| ! | ATAGGACCAGAAGGCACATG+AGG | - | chr8_3:26541866-26541885 | Msa1284350:intron | 50.0% |
| !!! | CAGAGCCTGATTTTAAGGCG+TGG | - | chr8_3:26542091-26542110 | Msa1284350:intron | 50.0% |
| GACGTTACGGTCGTAGTCAA+TGG | - | chr8_3:26542708-26542727 | Msa1284350:intron | 50.0% | |
| TTGCAACCGCAAGCTAGTTG+TGG | - | chr8_3:26542950-26542969 | Msa1284350:CDS | 50.0% | |
| TCATCTTCAAGATCCCCAGC+AGG | + | chr8_3:26542984-26543003 | None:intergenic | 50.0% | |
| AGCTGCTTGGAGTCTTCTAG+AGG | - | chr8_3:26543128-26543147 | Msa1284350:intron | 50.0% | |
| CCTCTATCACCAAAACCTCC+CGG | + | chr8_3:26543316-26543335 | None:intergenic | 50.0% | |
| ! | TCCGTTTCTGGGCATTTGCT+TGG | - | chr8_3:26543384-26543403 | Msa1284350:intron | 50.0% |
| CCCAAGCAAATGCCCAGAAA+CGG | + | chr8_3:26543388-26543407 | None:intergenic | 50.0% | |
| ! | CCGTTTCTGGGCATTTGCTT+GGG | - | chr8_3:26543385-26543404 | Msa1284350:intron | 50.0% |
| GAACCATGCGTCTTGGTTCA+AGG | - | chr8_3:26543640-26543659 | Msa1284350:intron | 50.0% | |
| TCTCCTTGAACCAAGACGCA+TGG | + | chr8_3:26543646-26543665 | None:intergenic | 50.0% | |
| TTGGCAAAGACGAAACTGGG+AGG | - | chr8_3:26544145-26544164 | Msa1284350:intron | 50.0% | |
| ! | CTGGTCTCGACTTGAACTCA+GGG | + | chr8_3:26544341-26544360 | None:intergenic | 50.0% |
| CTGAGTTCAAGTCGAGACCA+GGG | - | chr8_3:26544340-26544359 | Msa1284350:intron | 50.0% | |
| GGTGCAAGTCCTAATGGCAA+CGG | - | chr8_3:26545342-26545361 | Msa1284350:exon | 50.0% | |
| GGAGTGACTGCTAGCAGCAT+TGG | - | chr8_3:26539016-26539035 | Msa1284350:CDS | 55.0% | |
| ! | GGAGTACTCCTTCAGGCTTG+TGG | - | chr8_3:26539037-26539056 | Msa1284350:CDS | 55.0% |
| CTCGAAAGCCACAAGCCTGA+AGG | + | chr8_3:26539048-26539067 | None:intergenic | 55.0% | |
| !! | TCCGAGTTGGTGTGAAGGAG+AGG | - | chr8_3:26539189-26539208 | Msa1284350:intron | 55.0% |
| CCCTACCTGAACACTGATGC+AGG | - | chr8_3:26539826-26539845 | Msa1284350:intron | 55.0% | |
| CCCTGCATCAGTGTTCAGGT+AGG | + | chr8_3:26539830-26539849 | None:intergenic | 55.0% | |
| ! | GTCTCCTTTTGAGCATGGGG+AGG | - | chr8_3:26539855-26539874 | Msa1284350:intron | 55.0% |
| !! | GTAGCACAGGTACCGGTTGA+TGG | - | chr8_3:26540587-26540606 | Msa1284350:intron | 55.0% |
| ! | GGCCAATTTTCGTACCGCGT+AGG | - | chr8_3:26541059-26541078 | Msa1284350:intron | 55.0% |
| GGATTGCCTCATGTGCCTTC+TGG | + | chr8_3:26541875-26541894 | None:intergenic | 55.0% | |
| GTTGTGAGGATAGGCCAGTG+AGG | - | chr8_3:26542782-26542801 | Msa1284350:intron | 55.0% | |
| ACCGCAAGCTAGTTGTGGAC+TGG | - | chr8_3:26542955-26542974 | Msa1284350:CDS | 55.0% | |
| ! | CCCAGTCCACAACTAGCTTG+CGG | + | chr8_3:26542959-26542978 | None:intergenic | 55.0% |
| CCGCAAGCTAGTTGTGGACT+GGG | - | chr8_3:26542956-26542975 | Msa1284350:CDS | 55.0% | |
| !! | TTGTGGACTGGGTTCCTGCT+GGG | - | chr8_3:26542967-26542986 | Msa1284350:intron | 55.0% |
| !! | CCGGGAGGTTTTGGTGATAG+AGG | - | chr8_3:26543313-26543332 | Msa1284350:intron | 55.0% |
| ATGGGTGGAACCATGCGTCT+TGG | - | chr8_3:26543633-26543652 | Msa1284350:intron | 55.0% | |
| GCGACATCGCCATAGATACG+AGG | - | chr8_3:26543991-26544010 | Msa1284350:intron | 55.0% | |
| AGACGAAACTGGGAGGCGAA+TGG | - | chr8_3:26544152-26544171 | Msa1284350:intron | 55.0% | |
| ! | CCTGGTCTCGACTTGAACTC+AGG | + | chr8_3:26544342-26544361 | None:intergenic | 55.0% |
| CCTGAGTTCAAGTCGAGACC+AGG | - | chr8_3:26544339-26544358 | Msa1284350:intron | 55.0% | |
| ! | TGACGGACACTGTGCTGGGT+TGG | + | chr8_3:26541359-26541378 | None:intergenic | 60.0% |
| !! | GTTGTGGACTGGGTTCCTGC+TGG | - | chr8_3:26542966-26542985 | Msa1284350:intron | 60.0% |
| !! | TGTGGACTGGGTTCCTGCTG+GGG | - | chr8_3:26542968-26542987 | Msa1284350:intron | 60.0% |
| CGAAACTGGGAGGCGAATGG+AGG | - | chr8_3:26544155-26544174 | Msa1284350:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 26538570 | 26545740 | 26538570 | ID=Msa1284350;Name=Msa1284350 |
| chr8_3 | mRNA | 26538570 | 26545740 | 26538570 | ID=Msa1284350-mRNA-1;Parent=Msa1284350;Name=Msa1284350-mRNA-1;_AED=0.13;_eAED=0.13;_QI=398|0.95|0.95|1|0.95|0.90|22|296|603 |
| chr8_3 | exon | 26538570 | 26538630 | 26538570 | ID=Msa1284350-mRNA-1:exon:9222;Parent=Msa1284350-mRNA-1 |
| chr8_3 | exon | 26538704 | 26539114 | 26538704 | ID=Msa1284350-mRNA-1:exon:9221;Parent=Msa1284350-mRNA-1 |
| chr8_3 | exon | 26539926 | 26540019 | 26539926 | ID=Msa1284350-mRNA-1:exon:9220;Parent=Msa1284350-mRNA-1 |
| chr8_3 | exon | 26540134 | 26540214 | 26540134 | ID=Msa1284350-mRNA-1:exon:9219;Parent=Msa1284350-mRNA-1 |
| chr8_3 | exon | 26540298 | 26540346 | 26540298 | ID=Msa1284350-mRNA-1:exon:9218;Parent=Msa1284350-mRNA-1 |
| chr8_3 | exon | 26540607 | 26540692 | 26540607 | ID=Msa1284350-mRNA-1:exon:9217;Parent=Msa1284350-mRNA-1 |
| chr8_3 | exon | 26540791 | 26541018 | 26540791 | ID=Msa1284350-mRNA-1:exon:9216;Parent=Msa1284350-mRNA-1 |
| chr8_3 | exon | 26541161 | 26541199 | 26541161 | ID=Msa1284350-mRNA-1:exon:9215;Parent=Msa1284350-mRNA-1 |
| chr8_3 | exon | 26541294 | 26541383 | 26541294 | ID=Msa1284350-mRNA-1:exon:9214;Parent=Msa1284350-mRNA-1 |
| chr8_3 | exon | 26541984 | 26542046 | 26541984 | ID=Msa1284350-mRNA-1:exon:9213;Parent=Msa1284350-mRNA-1 |
| chr8_3 | exon | 26542158 | 26542227 | 26542158 | ID=Msa1284350-mRNA-1:exon:9212;Parent=Msa1284350-mRNA-1 |
| chr8_3 | exon | 26542394 | 26542440 | 26542394 | ID=Msa1284350-mRNA-1:exon:9211;Parent=Msa1284350-mRNA-1 |
| chr8_3 | exon | 26542581 | 26542643 | 26542581 | ID=Msa1284350-mRNA-1:exon:9210;Parent=Msa1284350-mRNA-1 |
| chr8_3 | exon | 26542741 | 26542791 | 26542741 | ID=Msa1284350-mRNA-1:exon:9209;Parent=Msa1284350-mRNA-1 |
| chr8_3 | exon | 26542880 | 26542978 | 26542880 | ID=Msa1284350-mRNA-1:exon:9208;Parent=Msa1284350-mRNA-1 |
| chr8_3 | exon | 26543054 | 26543118 | 26543054 | ID=Msa1284350-mRNA-1:exon:9207;Parent=Msa1284350-mRNA-1 |
| chr8_3 | exon | 26543230 | 26543286 | 26543230 | ID=Msa1284350-mRNA-1:exon:9206;Parent=Msa1284350-mRNA-1 |
| chr8_3 | exon | 26543651 | 26543768 | 26543651 | ID=Msa1284350-mRNA-1:exon:9205;Parent=Msa1284350-mRNA-1 |
| chr8_3 | exon | 26543865 | 26543915 | 26543865 | ID=Msa1284350-mRNA-1:exon:9204;Parent=Msa1284350-mRNA-1 |
| chr8_3 | exon | 26544028 | 26544114 | 26544028 | ID=Msa1284350-mRNA-1:exon:9203;Parent=Msa1284350-mRNA-1 |
| chr8_3 | exon | 26544407 | 26544486 | 26544407 | ID=Msa1284350-mRNA-1:exon:9202;Parent=Msa1284350-mRNA-1 |
| chr8_3 | exon | 26545225 | 26545740 | 26545225 | ID=Msa1284350-mRNA-1:exon:9201;Parent=Msa1284350-mRNA-1 |
| chr8_3 | five_prime_UTR | 26545343 | 26545740 | 26545343 | ID=Msa1284350-mRNA-1:five_prime_utr;Parent=Msa1284350-mRNA-1 |
| chr8_3 | CDS | 26545225 | 26545342 | 26545225 | ID=Msa1284350-mRNA-1:cds;Parent=Msa1284350-mRNA-1 |
| chr8_3 | CDS | 26544407 | 26544486 | 26544407 | ID=Msa1284350-mRNA-1:cds;Parent=Msa1284350-mRNA-1 |
| chr8_3 | CDS | 26544028 | 26544114 | 26544028 | ID=Msa1284350-mRNA-1:cds;Parent=Msa1284350-mRNA-1 |
| chr8_3 | CDS | 26543865 | 26543915 | 26543865 | ID=Msa1284350-mRNA-1:cds;Parent=Msa1284350-mRNA-1 |
| chr8_3 | CDS | 26543651 | 26543768 | 26543651 | ID=Msa1284350-mRNA-1:cds;Parent=Msa1284350-mRNA-1 |
| chr8_3 | CDS | 26543230 | 26543286 | 26543230 | ID=Msa1284350-mRNA-1:cds;Parent=Msa1284350-mRNA-1 |
| chr8_3 | CDS | 26543054 | 26543118 | 26543054 | ID=Msa1284350-mRNA-1:cds;Parent=Msa1284350-mRNA-1 |
| chr8_3 | CDS | 26542880 | 26542978 | 26542880 | ID=Msa1284350-mRNA-1:cds;Parent=Msa1284350-mRNA-1 |
| chr8_3 | CDS | 26542741 | 26542791 | 26542741 | ID=Msa1284350-mRNA-1:cds;Parent=Msa1284350-mRNA-1 |
| chr8_3 | CDS | 26542581 | 26542643 | 26542581 | ID=Msa1284350-mRNA-1:cds;Parent=Msa1284350-mRNA-1 |
| chr8_3 | CDS | 26542394 | 26542440 | 26542394 | ID=Msa1284350-mRNA-1:cds;Parent=Msa1284350-mRNA-1 |
| chr8_3 | CDS | 26542158 | 26542227 | 26542158 | ID=Msa1284350-mRNA-1:cds;Parent=Msa1284350-mRNA-1 |
| chr8_3 | CDS | 26541984 | 26542046 | 26541984 | ID=Msa1284350-mRNA-1:cds;Parent=Msa1284350-mRNA-1 |
| chr8_3 | CDS | 26541294 | 26541383 | 26541294 | ID=Msa1284350-mRNA-1:cds;Parent=Msa1284350-mRNA-1 |
| chr8_3 | CDS | 26541161 | 26541199 | 26541161 | ID=Msa1284350-mRNA-1:cds;Parent=Msa1284350-mRNA-1 |
| chr8_3 | CDS | 26540791 | 26541018 | 26540791 | ID=Msa1284350-mRNA-1:cds;Parent=Msa1284350-mRNA-1 |
| chr8_3 | CDS | 26540607 | 26540692 | 26540607 | ID=Msa1284350-mRNA-1:cds;Parent=Msa1284350-mRNA-1 |
| chr8_3 | CDS | 26540298 | 26540346 | 26540298 | ID=Msa1284350-mRNA-1:cds;Parent=Msa1284350-mRNA-1 |
| chr8_3 | CDS | 26540134 | 26540214 | 26540134 | ID=Msa1284350-mRNA-1:cds;Parent=Msa1284350-mRNA-1 |
| chr8_3 | CDS | 26539926 | 26540019 | 26539926 | ID=Msa1284350-mRNA-1:cds;Parent=Msa1284350-mRNA-1 |
| chr8_3 | CDS | 26538939 | 26539114 | 26538939 | ID=Msa1284350-mRNA-1:cds;Parent=Msa1284350-mRNA-1 |
| chr8_3 | three_prime_UTR | 26538704 | 26538938 | 26538704 | ID=Msa1284350-mRNA-1:three_prime_utr;Parent=Msa1284350-mRNA-1 |
| chr8_3 | three_prime_UTR | 26538570 | 26538630 | 26538570 | ID=Msa1284350-mRNA-1:three_prime_utr;Parent=Msa1284350-mRNA-1 |
| Gene Sequence |
| Protein sequence |
