AlfalfaGEDB | Msa1299590

M. sativa cultivar zhongmu-4 / Msa1299590

KEGG: K02997
GO: GO:0003674 GO:0003676 GO:0003723 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0005911 GO:0006417 GO:0006450 GO:0008150 GO:0009506 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010608 GO:0010628 GO:0015935 GO:0016020 GO:0019222 GO:0019843 GO:0022626 GO:0022627 GO:0030054 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032268 GO:0032270 GO:0032991 GO:0034248 GO:0034250 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0045727 GO:0045903 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0055044 GO:0060255 GO:0065007 GO:0065008 GO:0080090 GO:0097159 GO:1901363 GO:1990904 GO:2000112
PFAM: PF00163.22

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1299590	XP_003598026.1	100.000	197	0	0	1	197	1	197	5.17e-142	404

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1299590	sp\|Q9FLF0\|RS92_ARATH	90.909	187	17	0	1	187	1	187	2.10e-123	349

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1299590	B7FMD4	100.000	197	0	0	1	197	1	197	2.47e-142	404

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0002750	Msa1299590	0.832820	7.601065e-56	-8.615850e-47
Msa0002790	Msa1299590	0.842989	1.846418e-58	-8.615850e-47
Msa0032780	Msa1299590	0.820075	8.306088e-53	-8.615850e-47
Msa0044890	Msa1299590	0.823682	1.214421e-53	-8.615850e-47
Msa0045730	Msa1299590	0.802374	5.784194e-49	-8.615850e-47
Msa0048180	Msa1299590	0.819522	1.111081e-52	-8.615850e-47
Msa0068970	Msa1299590	0.817242	3.649232e-52	-8.615850e-47
Msa0074030	Msa1299590	0.851340	9.459517e-61	-8.615850e-47
Msa0086750	Msa1299590	0.865141	7.321816e-65	-8.615850e-47
Msa0100730	Msa1299590	0.812416	4.285653e-51	-8.615850e-47
Msa0114870	Msa1299590	0.808812	2.576818e-50	-8.615850e-47
Msa0116130	Msa1299590	0.813054	3.108330e-51	-8.615850e-47
Msa0116670	Msa1299590	0.844526	7.157443e-59	-8.615850e-47
Msa0615580	Msa1299590	0.829407	5.238910e-55	-8.615850e-47
Msa0622750	Msa1299590	0.818284	2.123739e-52	-8.615850e-47
Msa0623200	Msa1299590	0.820487	6.683439e-53	-8.615850e-47
Msa0661300	Msa1299590	0.810390	1.180694e-50	-8.615850e-47
Msa0664560	Msa1299590	0.806680	7.314498e-50	-8.615850e-47
Msa0666230	Msa1299590	0.811079	8.376365e-51	-8.615850e-47
Msa0669520	Msa1299590	0.802360	5.822323e-49	-8.615850e-47
Msa0695450	Msa1299590	0.817226	3.679871e-52	-8.615850e-47
Msa0698780	Msa1299590	0.872008	4.423426e-67	-8.615850e-47
Msa0729200	Msa1299590	0.812602	3.904345e-51	-8.615850e-47
Msa0766080	Msa1299590	0.808812	2.576818e-50	-8.615850e-47
Msa0769590	Msa1299590	0.814270	1.677794e-51	-8.615850e-47
Msa0785130	Msa1299590	0.833664	4.684668e-56	-8.615850e-47
Msa0806880	Msa1299590	0.823031	1.723713e-53	-8.615850e-47
Msa0817540	Msa1299590	0.820733	5.869394e-53	-8.615850e-47
Msa0830090	Msa1299590	0.816614	5.049521e-52	-8.615850e-47
Msa0128860	Msa1299590	0.804879	1.747717e-49	-8.615850e-47
Msa0133540	Msa1299590	0.844563	6.997266e-59	-8.615850e-47
Msa0140820	Msa1299590	0.800145	1.653031e-48	-8.615850e-47
Msa0140850	Msa1299590	0.830851	2.326732e-55	-8.615850e-47
Msa0146340	Msa1299590	0.801429	9.042344e-49	-8.615850e-47
Msa0172900	Msa1299590	0.807634	4.592194e-50	-8.615850e-47
Msa0173530	Msa1299590	0.843955	1.019321e-58	-8.615850e-47
Msa0174730	Msa1299590	0.806789	6.934869e-50	-8.615850e-47
Msa0181490	Msa1299590	0.834604	2.722270e-56	-8.615850e-47
Msa0183090	Msa1299590	0.824525	7.701764e-54	-8.615850e-47
Msa0189700	Msa1299590	0.869714	2.516905e-66	-8.615850e-47
Msa0218830	Msa1299590	0.819753	9.843030e-53	-8.615850e-47
Msa0230490	Msa1299590	0.857189	1.933704e-62	-8.615850e-47
Msa0232010	Msa1299590	0.866110	3.623567e-65	-8.615850e-47
Msa0232080	Msa1299590	0.868066	8.607265e-66	-8.615850e-47
Msa1262890	Msa1299590	0.807845	4.143123e-50	-8.615850e-47
Msa1266060	Msa1299590	0.822686	2.074185e-53	-8.615850e-47
Msa1273340	Msa1299590	0.860089	2.632715e-63	-8.615850e-47
Msa1284350	Msa1299590	0.812886	3.383175e-51	-8.615850e-47
Msa1299590	Msa1332250	0.870947	9.924412e-67	-8.615850e-47
Msa1299590	Msa1338190	0.830773	2.431285e-55	-8.615850e-47
Msa1299590	Msa1343260	0.871261	7.820705e-67	-8.615850e-47
Msa1299590	Msa1349570	0.808952	2.405347e-50	-8.615850e-47
Msa1299590	Msa1362790	0.843276	1.548151e-58	-8.615850e-47
Msa1299590	Msa1363330	0.809192	2.136289e-50	-8.615850e-47
Msa1299590	Msa1364480	0.856275	3.592740e-62	-8.615850e-47
Msa1299590	Msa1366180	0.801164	1.024293e-48	-8.615850e-47
Msa1299590	Msa1379760	0.802554	5.310396e-49	-8.615850e-47
Msa1299590	Msa1386600	0.808792	2.602510e-50	-8.615850e-47
Msa1299590	Msa1410440	0.812768	3.590629e-51	-8.615850e-47
Msa1299590	Msa1413500	0.819505	1.121419e-52	-8.615850e-47
Msa1299590	Msa1418770	0.822084	2.861936e-53	-8.615850e-47
Msa1299590	Msa1426120	0.850685	1.447161e-60	-8.615850e-47
Msa1299590	Msa1426490	0.811207	7.856037e-51	-8.615850e-47
Msa1299590	Msa1427560	0.815474	9.073538e-52	-8.615850e-47
Msa0369450	Msa1299590	0.804669	1.933373e-49	-8.615850e-47
Msa0393370	Msa1299590	0.803593	3.237763e-49	-8.615850e-47
Msa0443390	Msa1299590	0.825541	4.430751e-54	-8.615850e-47
Msa0482650	Msa1299590	0.809120	2.213309e-50	-8.615850e-47
Msa1006840	Msa1299590	0.803415	3.524207e-49	-8.615850e-47
Msa1010310	Msa1299590	0.809343	1.982693e-50	-8.615850e-47
Msa1019240	Msa1299590	0.823519	1.326276e-53	-8.615850e-47
Msa1019260	Msa1299590	0.835012	2.148909e-56	-8.615850e-47
Msa1021470	Msa1299590	0.806567	7.725504e-50	-8.615850e-47
Msa1024180	Msa1299590	0.807697	4.452922e-50	-8.615850e-47
Msa1039520	Msa1299590	0.846349	2.297118e-59	-8.615850e-47
Msa1072710	Msa1299590	0.847062	1.466800e-59	-8.615850e-47
Msa1078870	Msa1299590	0.846041	2.785227e-59	-8.615850e-47
Msa1078980	Msa1299590	0.814496	1.495895e-51	-8.615850e-47
Msa1080350	Msa1299590	0.805654	1.202355e-49	-8.615850e-47
Msa1096900	Msa1299590	0.800015	1.757407e-48	-8.615850e-47
Msa1104140	Msa1299590	0.800016	1.756371e-48	-8.615850e-47
Msa1104210	Msa1299590	0.814954	1.183983e-51	-8.615850e-47
Msa0258850	Msa1299590	0.822676	2.085412e-53	-8.615850e-47
Msa0264010	Msa1299590	0.803579	3.259257e-49	-8.615850e-47
Msa0289580	Msa1299590	0.852703	3.879680e-61	-8.615850e-47
Msa0289610	Msa1299590	0.847865	8.822274e-60	-8.615850e-47
Msa0298200	Msa1299590	0.812241	4.679960e-51	-8.615850e-47
Msa0306690	Msa1299590	0.834893	2.303369e-56	-8.615850e-47
Msa0317910	Msa1299590	0.835191	1.937325e-56	-8.615850e-47
Msa0327300	Msa1299590	0.824202	9.169066e-54	-8.615850e-47
Msa0327330	Msa1299590	0.817200	3.730620e-52	-8.615850e-47
Msa0336010	Msa1299590	0.843718	1.179550e-58	-8.615850e-47
Msa0337670	Msa1299590	0.802361	5.818847e-49	-8.615850e-47
Msa0348830	Msa1299590	0.865481	5.723126e-65	-8.615850e-47
Msa0355680	Msa1299590	0.802933	4.435190e-49	-8.615850e-47
Msa1125860	Msa1299590	0.808107	3.644063e-50	-8.615850e-47
Msa1126060	Msa1299590	0.803646	3.156976e-49	-8.615850e-47
Msa1126830	Msa1299590	0.822655	2.109468e-53	-8.615850e-47
Msa1143510	Msa1299590	0.831615	1.510192e-55	-8.615850e-47
Msa1165780	Msa1299590	0.805264	1.451769e-49	-8.615850e-47
Msa1169180	Msa1299590	0.810400	1.174578e-50	-8.615850e-47
Msa1208020	Msa1299590	0.808051	3.743954e-50	-8.615850e-47
Msa1215820	Msa1299590	0.829795	4.213878e-55	-8.615850e-47
Msa0486070	Msa1299590	0.831423	1.683759e-55	-8.615850e-47
Msa0526540	Msa1299590	0.805546	1.266958e-49	-8.615850e-47
Msa0527150	Msa1299590	0.801058	1.077043e-48	-8.615850e-47
Msa0531650	Msa1299590	0.828436	9.002484e-55	-8.615850e-47
Msa0581110	Msa1299590	0.821298	4.348949e-53	-8.615850e-47
Msa0584260	Msa1299590	0.831435	1.672080e-55	-8.615850e-47
Msa0586420	Msa1299590	0.819014	1.450383e-52	-8.615850e-47
Msa0588360	Msa1299590	0.837631	4.638654e-57	-8.615850e-47
Msa0867060	Msa1299590	0.829302	5.554227e-55	-8.615850e-47
Msa0876170	Msa1299590	0.816758	4.688810e-52	-8.615850e-47
Msa0881290	Msa1299590	0.868120	8.268719e-66	-8.615850e-47
Msa0953310	Msa1299590	0.833757	4.440081e-56	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
Msa1299590	MtrunA17_Chr3g0077371	100.000	197	0	1	197	1	197	4.76e-146	404
Msa1299590	MtrunA17_Chr3g0077391	100.000	197	0	1	197	1	197	4.76e-146	404
Msa1299590	MtrunA17_Chr4g0009481	100.000	197	0	1	197	1	197	4.76e-146	404
Msa1299590	MtrunA17_Chr7g0241891	98.985	197	2	1	197	1	197	2.61e-144	399
Msa1299590	MtrunA17_Chr1g0182531	98.477	197	3	1	197	28	224	3.76e-143	397
Msa1299590	MtrunA17_Chr4g0060551	98.261	115	2	1	115	1	115	5.75e-79	231
Msa1299590	MtrunA17_Chr4g0009501	100.000	60	0	138	197	13	72	4.70e-38	126

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1299590	AT5G39850.1	90.909	187	17	0	1	187	1	187	2.13e-124	349
Msa1299590	AT5G15200.1	84.343	198	30	1	1	197	1	198	9.63e-118	332
Msa1299590	AT5G15200.2	89.051	137	15	0	1	137	1	137	4.16e-86	251

Find 83 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TACACACAGCATCAAGTAAA+AGG	0.265429	8_3:+60890422	None:intergenic
AATAAACAAGGATGGGAAAA+TGG	0.279207	8_3:+60890546	None:intergenic
TGATCCAACTATGCTTCTTA+TGG	0.287832	8_3:-60890331	Msa1299590:three_prime_UTR
CCTTTCGGTGGTGGTCTTCC+TGG	0.299249	8_3:-60890736	Msa1299590:CDS
ATCACCACCGGAAGCCTTCT+TGG	0.302286	8_3:+60890681	None:intergenic
GCCCAGCCCTATAGAAATTA+GGG	0.303462	8_3:-60892556	None:intergenic
TTGAAGCTGGTCGGAGAGTA+TGG	0.314070	8_3:-60892337	Msa1299590:CDS
GAACAAGCTCGATTATGTTT+TGG	0.327341	8_3:-60892149	Msa1299590:CDS
TTCGCTGCAAGCGCGAGCTT+TGG	0.327479	8_3:-60892312	Msa1299590:CDS
CAGACACTCGTCTTCAAATC+TGG	0.346433	8_3:-60892091	Msa1299590:CDS
ACATCCCATCCTTCATGGTT+AGG	0.353382	8_3:-60890798	Msa1299590:CDS
CCTTCTTGGCTGCAGCCTTA+AGG	0.354248	8_3:+60890695	None:intergenic
GCTGCAAGCGCGAGCTTTGG+AGG	0.363662	8_3:-60892309	Msa1299590:CDS
ACCATGCTAGGGTTCTTATC+AGG	0.369101	8_3:-60892051	Msa1299590:CDS
CAAAGTTTCGGTTGGATACA+TGG	0.398736	8_3:+60890352	None:intergenic
GCATAGTTGGATCAAAGTTT+CGG	0.405107	8_3:+60890340	None:intergenic
TGATCTTTATACAAGTTAGT+TGG	0.405273	8_3:-60890247	Msa1299590:three_prime_UTR
ACAAAGATCATCAAATGTAT+TGG	0.418707	8_3:+60890455	None:intergenic
GTTTCATAGGGTTGGGAGGC+AGG	0.422860	8_3:-60890827	Msa1299590:intron
TCCAAACGCTCCTTCTCATA+TGG	0.423037	8_3:+60892367	None:intergenic
TGATTCCTTGCCGCTGCCGC+CGG	0.433341	8_3:+60892456	None:intergenic
TCCATATGAGAAGGAGCGTT+TGG	0.433604	8_3:-60892368	Msa1299590:CDS
CATCCCATCCTTCATGGTTA+GGG	0.434949	8_3:-60890797	Msa1299590:CDS
TGCCGCCGGTGATGCCTACT+AGG	0.436069	8_3:+60892470	None:intergenic
GCTGCAGCCAAGAAGGCTTC+CGG	0.439232	8_3:-60890688	Msa1299590:CDS
TTGGATCAAAACTTAATACT+TGG	0.442599	8_3:+60890474	None:intergenic
ATGGTGAAATGCTGCGCTTT+AGG	0.444202	8_3:+60892512	None:intergenic
CTGCAAGCGCGAGCTTTGGA+GGG	0.446963	8_3:-60892308	Msa1299590:CDS
TGTTCTGTGTCTCATCTAGA+AGG	0.448082	8_3:+60892167	None:intergenic
CTCACAAGTCCTTTCGGTGG+TGG	0.464545	8_3:-60890745	Msa1299590:CDS
CAAGGAATCAGAGATCAAAA+TGG	0.472435	8_3:-60892443	Msa1299590:exon
TTATCAGGCAGAGGCACATC+AGG	0.476066	8_3:-60892036	Msa1299590:intron
AGTGAACATCCCATCCTTCA+TGG	0.479160	8_3:-60890803	Msa1299590:CDS
TTCTTTCGCTTCACACGACC+AGG	0.480028	8_3:+60890718	None:intergenic
AAAGCGTTCTAGCATTGTTA+CGG	0.481953	8_3:+60892263	None:intergenic
GTAGGCATCACCGGCGGCAG+CGG	0.492678	8_3:-60892466	Msa1299590:five_prime_UTR
TTCTAGCATTGTTACGGATA+CGG	0.498419	8_3:+60892269	None:intergenic
GAATCCTCGTCGGATCTTCG+AGG	0.499570	8_3:-60892224	Msa1299590:CDS
TACACCATAAGAAGCATAGT+TGG	0.501489	8_3:+60890327	None:intergenic
AGTTGGATCAAAGTTTCGGT+TGG	0.502951	8_3:+60890344	None:intergenic
AGTCTAGGACAGATATAAAA+CGG	0.515542	8_3:+60890599	None:intergenic
CCTTAAGGCTGCAGCCAAGA+AGG	0.517095	8_3:-60890695	Msa1299590:CDS
CCATCCTTGTTTATTGTGTG+AGG	0.520499	8_3:-60890538	Msa1299590:three_prime_UTR
CTAAGTCCATTCACCATGCT+AGG	0.521010	8_3:-60892063	Msa1299590:CDS
AAGAAGGCTTCCGGTGGTGA+TGG	0.531981	8_3:-60890679	Msa1299590:CDS
TCATTTGTGATTAAAATGTC+AGG	0.535564	8_3:+60890196	None:intergenic
CATCACCGGCGGCAGCGGCA+AGG	0.537265	8_3:-60892461	Msa1299590:five_prime_UTR
AAGAACCCTAGCATGGTGAA+TGG	0.539163	8_3:+60892057	None:intergenic
CTCCTCATCACCATCACCAC+CGG	0.544543	8_3:+60890669	None:intergenic
TCAACCCTAACCATGAAGGA+TGG	0.545370	8_3:+60890793	None:intergenic
CCTCACACAATAAACAAGGA+TGG	0.552644	8_3:+60890538	None:intergenic
TGTGAAGCGAAAGAACCTTA+AGG	0.553464	8_3:-60890710	Msa1299590:CDS
TGATAGAAAATCTAAAGTCT+AGG	0.553926	8_3:+60890584	None:intergenic
CTCACACAATAAACAAGGAT+GGG	0.565131	8_3:+60890539	None:intergenic
TTATCAGTTCTGAAAGGCAC+AGG	0.567178	8_3:+60890297	None:intergenic
AACTATGCTTCTTATGGTGT+AGG	0.569156	8_3:-60890325	Msa1299590:three_prime_UTR
TGAATCAACCCTAACCATGA+AGG	0.569890	8_3:+60890789	None:intergenic
CTAGGGTTCTTATCAGGCAG+AGG	0.571814	8_3:-60892045	Msa1299590:CDS
CAACCCTAACCATGAAGGAT+GGG	0.574613	8_3:+60890794	None:intergenic
TCACAATTATCAGTTCTGAA+AGG	0.576272	8_3:+60890291	None:intergenic
TTTGGATGCTGAGTTGAAGC+TGG	0.579570	8_3:-60892350	Msa1299590:CDS
TATTGTTTCATAGGGTTGGG+AGG	0.586042	8_3:-60890831	Msa1299590:intron
TTCCGGTGGTGATGGTGATG+AGG	0.588312	8_3:-60890671	Msa1299590:CDS
GATATAAAACGGCTAGAGCA+AGG	0.589602	8_3:+60890610	None:intergenic
AATCCTCGTCGGATCTTCGA+GGG	0.591722	8_3:-60892223	Msa1299590:CDS
AAAGTTTCGGTTGGATACAT+GGG	0.591867	8_3:+60890353	None:intergenic
TTGAGGAGGATGTTTAAGCA+TGG	0.593185	8_3:-60892190	Msa1299590:CDS
GCCTCGTCGTCCATATGAGA+AGG	0.595822	8_3:-60892377	Msa1299590:CDS
TAAGTCCATTCACCATGCTA+GGG	0.602951	8_3:-60892062	Msa1299590:CDS
TCACTCACAAGTCCTTTCGG+TGG	0.620110	8_3:-60890748	Msa1299590:CDS
ACTCGTCTTCAAATCTGGCA+TGG	0.621528	8_3:-60892086	Msa1299590:CDS
GCAGCCAAGAAGGCTTCCGG+TGG	0.625260	8_3:-60890685	Msa1299590:CDS
AACTTGTATAAAGATCAAGC+AGG	0.637230	8_3:+60890253	None:intergenic
GATGCTGAGTTGAAGCTGGT+CGG	0.640820	8_3:-60892346	Msa1299590:CDS
CCAGGAAGACCACCACCGAA+AGG	0.644057	8_3:+60890736	None:intergenic
CGGTGGTGATGGTGATGAGG+AGG	0.644753	8_3:-60890668	Msa1299590:CDS
GCCTGATAAGAACCCTAGCA+TGG	0.650504	8_3:+60892050	None:intergenic
ATTTCCTCACACAATAAACA+AGG	0.669010	8_3:+60890534	None:intergenic
TTTGTGATTAAAATGTCAGG+TGG	0.686722	8_3:+60890199	None:intergenic
TCCTTCTCATATGGACGACG+AGG	0.694526	8_3:+60892376	None:intergenic
TGGATGAGAAGAATCCTCGT+CGG	0.703960	8_3:-60892234	Msa1299590:CDS
AACCTAGTAGGCATCACCGG+CGG	0.714986	8_3:-60892472	Msa1299590:five_prime_UTR
TCACCCTCGAAGATCCGACG+AGG	0.762913	8_3:+60892220	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAATAATTCAAAGTAATTAT+AGG	+	chr8_3:60891023-60891042	None:intergenic	10.0%
!!	AAAAAAAAAGGATAAAATTA+GGG	+	chr8_3:60891809-60891828	None:intergenic	10.0%
!!	AAAAAAAAAAGGATAAAATT+AGG	+	chr8_3:60891810-60891829	None:intergenic	10.0%
!!	TAAATAGAAAGAAAAAAAAA+AGG	+	chr8_3:60891821-60891840	None:intergenic	10.0%
!!	AAATAATTCAAAGTAATTAT+AGG	+	chr8_3:60891023-60891042	None:intergenic	10.0%
!!	AAAAAAAAAGGATAAAATTA+GGG	+	chr8_3:60891809-60891828	None:intergenic	10.0%
!!	AAAAAAAAAAGGATAAAATT+AGG	+	chr8_3:60891810-60891829	None:intergenic	10.0%
!!	TAAATAGAAAGAAAAAAAAA+AGG	+	chr8_3:60891821-60891840	None:intergenic	10.0%
!!!	GAATTAATCTGATTTTTTTA+TGG	-	chr8_3:60890752-60890771	Msa1299590:CDS	15.0%
!!!	TTTTTTTTTTTTTGAACTCT+CGG	+	chr8_3:60891418-60891437	None:intergenic	15.0%
!!	TAGTATTAATGAAATATGTT+TGG	-	chr8_3:60891839-60891858	Msa1299590:intron	15.0%
!!!	GAATTAATCTGATTTTTTTA+TGG	-	chr8_3:60890752-60890771	Msa1299590:CDS	15.0%
!!!	TTTTTTTTTTTTTGAACTCT+CGG	+	chr8_3:60891418-60891437	None:intergenic	15.0%
!!	TAGTATTAATGAAATATGTT+TGG	-	chr8_3:60891839-60891858	Msa1299590:intron	15.0%
!!	TCAGATTAATTCATCATTAA+CGG	+	chr8_3:60890744-60890763	None:intergenic	20.0%
!!!	ATGTTTTTCAAAATGATACA+GGG	+	chr8_3:60891255-60891274	None:intergenic	20.0%
!!!	AATGTTTTTCAAAATGATAC+AGG	+	chr8_3:60891256-60891275	None:intergenic	20.0%
!!	GAGAGTTCAAAAAAAAAAAA+AGG	-	chr8_3:60891417-60891436	Msa1299590:intron	20.0%
!!	CAAAACATGTATTGAATTAA+AGG	+	chr8_3:60891493-60891512	None:intergenic	20.0%
!!	GCAAATGAAAAATATAATTG+AGG	+	chr8_3:60891771-60891790	None:intergenic	20.0%
!!	TAATGAAATATGTTTGGATA+TGG	-	chr8_3:60891845-60891864	Msa1299590:intron	20.0%
!!!	AATGTCATTTATTGTTTCAT+AGG	-	chr8_3:60891873-60891892	Msa1299590:intron	20.0%
!!!	ATGTCATTTATTGTTTCATA+GGG	-	chr8_3:60891874-60891893	Msa1299590:intron	20.0%
!!!	TTTGATATTGCATATTTTGA+TGG	-	chr8_3:60892333-60892352	Msa1299590:CDS	20.0%
!!	TCAGATTAATTCATCATTAA+CGG	+	chr8_3:60890744-60890763	None:intergenic	20.0%
!!!	ATGTTTTTCAAAATGATACA+GGG	+	chr8_3:60891255-60891274	None:intergenic	20.0%
!!!	AATGTTTTTCAAAATGATAC+AGG	+	chr8_3:60891256-60891275	None:intergenic	20.0%
!!	GAGAGTTCAAAAAAAAAAAA+AGG	-	chr8_3:60891417-60891436	Msa1299590:intron	20.0%
!!	CAAAACATGTATTGAATTAA+AGG	+	chr8_3:60891493-60891512	None:intergenic	20.0%
!!	GCAAATGAAAAATATAATTG+AGG	+	chr8_3:60891771-60891790	None:intergenic	20.0%
!!	TAATGAAATATGTTTGGATA+TGG	-	chr8_3:60891845-60891864	Msa1299590:intron	20.0%
!!!	AATGTCATTTATTGTTTCAT+AGG	-	chr8_3:60891873-60891892	Msa1299590:intron	20.0%
!!!	ATGTCATTTATTGTTTCATA+GGG	-	chr8_3:60891874-60891893	Msa1299590:intron	20.0%
!!!	TTTGATATTGCATATTTTGA+TGG	-	chr8_3:60892333-60892352	Msa1299590:CDS	20.0%
!!	CTATAAAGAAAATTAGCTTG+TGG	+	chr8_3:60890934-60890953	None:intergenic	25.0%
!	GGCTTATTTGAACATATATT+TGG	+	chr8_3:60891220-60891239	None:intergenic	25.0%
!!	AAAAGGAAAGTATATCTAGA+AGG	-	chr8_3:60891434-60891453	Msa1299590:intron	25.0%
!	ATTTATTGTTTCATAGGGTT+GGG	-	chr8_3:60891879-60891898	Msa1299590:intron	25.0%
!!	TGATAGAAAATCTAAAGTCT+AGG	+	chr8_3:60892132-60892151	None:intergenic	25.0%
!	TTGGATCAAAACTTAATACT+TGG	+	chr8_3:60892242-60892261	None:intergenic	25.0%
!	ACAAAGATCATCAAATGTAT+TGG	+	chr8_3:60892261-60892280	None:intergenic	25.0%
!	TGATCTTTATACAAGTTAGT+TGG	-	chr8_3:60892466-60892485	Msa1299590:five_prime_UTR	25.0%
!	TCATTTGTGATTAAAATGTC+AGG	+	chr8_3:60892520-60892539	None:intergenic	25.0%
!!	CTATAAAGAAAATTAGCTTG+TGG	+	chr8_3:60890934-60890953	None:intergenic	25.0%
!	GGCTTATTTGAACATATATT+TGG	+	chr8_3:60891220-60891239	None:intergenic	25.0%
!!	AAAAGGAAAGTATATCTAGA+AGG	-	chr8_3:60891434-60891453	Msa1299590:intron	25.0%
!	ATTTATTGTTTCATAGGGTT+GGG	-	chr8_3:60891879-60891898	Msa1299590:intron	25.0%
!!	TGATAGAAAATCTAAAGTCT+AGG	+	chr8_3:60892132-60892151	None:intergenic	25.0%
!	TTGGATCAAAACTTAATACT+TGG	+	chr8_3:60892242-60892261	None:intergenic	25.0%
!	ACAAAGATCATCAAATGTAT+TGG	+	chr8_3:60892261-60892280	None:intergenic	25.0%
!	TGATCTTTATACAAGTTAGT+TGG	-	chr8_3:60892466-60892485	Msa1299590:five_prime_UTR	25.0%
!	TCATTTGTGATTAAAATGTC+AGG	+	chr8_3:60892520-60892539	None:intergenic	25.0%
!	TGCTGATCTATTTGTTAGTT+TGG	-	chr8_3:60890798-60890817	Msa1299590:CDS	30.0%
	AGTGCGAAAGCAATTATAAT+AGG	+	chr8_3:60890865-60890884	None:intergenic	30.0%
	TATGAAGTACGAAATCTCTT+CGG	-	chr8_3:60890959-60890978	Msa1299590:intron	30.0%
!!!	TTTTTTTTTTGAACTCTCGG+AGG	+	chr8_3:60891415-60891434	None:intergenic	30.0%
!	ATATCTAGAAGGAAGTATAC+AGG	-	chr8_3:60891445-60891464	Msa1299590:intron	30.0%
	AAAGAGTTACAAGCAGTTAT+GGG	+	chr8_3:60891526-60891545	None:intergenic	30.0%
!	TTTACTTGCATCTTTTGTAG+TGG	-	chr8_3:60891547-60891566	Msa1299590:intron	30.0%
	AAGTAGAGATCATCAAGTAA+TGG	-	chr8_3:60891618-60891637	Msa1299590:intron	30.0%
	ACACTAACAAGTATAGTGTT+AGG	+	chr8_3:60891693-60891712	None:intergenic	30.0%
	TCTATTTACTTACCTCTGAA+TGG	-	chr8_3:60891743-60891762	Msa1299590:intron	30.0%
!!	TTTCATTTGCTGTATGCTTA+TGG	-	chr8_3:60891781-60891800	Msa1299590:intron	30.0%
!!	TTCATTTGCTGTATGCTTAT+GGG	-	chr8_3:60891782-60891801	Msa1299590:intron	30.0%
	CATTTATTGTTTCATAGGGT+TGG	-	chr8_3:60891878-60891897	Msa1299590:intron	30.0%
!	AGTCTAGGACAGATATAAAA+CGG	+	chr8_3:60892117-60892136	None:intergenic	30.0%
	AATAAACAAGGATGGGAAAA+TGG	+	chr8_3:60892170-60892189	None:intergenic	30.0%
	ATTTCCTCACACAATAAACA+AGG	+	chr8_3:60892182-60892201	None:intergenic	30.0%
!!	TCACAATTATCAGTTCTGAA+AGG	+	chr8_3:60892425-60892444	None:intergenic	30.0%
	AACTTGTATAAAGATCAAGC+AGG	+	chr8_3:60892463-60892482	None:intergenic	30.0%
	TTTGTGATTAAAATGTCAGG+TGG	+	chr8_3:60892517-60892536	None:intergenic	30.0%
!	TGCTGATCTATTTGTTAGTT+TGG	-	chr8_3:60890798-60890817	Msa1299590:CDS	30.0%
	AGTGCGAAAGCAATTATAAT+AGG	+	chr8_3:60890865-60890884	None:intergenic	30.0%
	TATGAAGTACGAAATCTCTT+CGG	-	chr8_3:60890959-60890978	Msa1299590:intron	30.0%
!!!	TTTTTTTTTTGAACTCTCGG+AGG	+	chr8_3:60891415-60891434	None:intergenic	30.0%
!	ATATCTAGAAGGAAGTATAC+AGG	-	chr8_3:60891445-60891464	Msa1299590:intron	30.0%
	AAAGAGTTACAAGCAGTTAT+GGG	+	chr8_3:60891526-60891545	None:intergenic	30.0%
!	TTTACTTGCATCTTTTGTAG+TGG	-	chr8_3:60891547-60891566	Msa1299590:intron	30.0%
	AAGTAGAGATCATCAAGTAA+TGG	-	chr8_3:60891618-60891637	Msa1299590:intron	30.0%
	ACACTAACAAGTATAGTGTT+AGG	+	chr8_3:60891693-60891712	None:intergenic	30.0%
	TCTATTTACTTACCTCTGAA+TGG	-	chr8_3:60891743-60891762	Msa1299590:intron	30.0%
!!	TTTCATTTGCTGTATGCTTA+TGG	-	chr8_3:60891781-60891800	Msa1299590:intron	30.0%
!!	TTCATTTGCTGTATGCTTAT+GGG	-	chr8_3:60891782-60891801	Msa1299590:intron	30.0%
	CATTTATTGTTTCATAGGGT+TGG	-	chr8_3:60891878-60891897	Msa1299590:intron	30.0%
!	AGTCTAGGACAGATATAAAA+CGG	+	chr8_3:60892117-60892136	None:intergenic	30.0%
	AATAAACAAGGATGGGAAAA+TGG	+	chr8_3:60892170-60892189	None:intergenic	30.0%
	ATTTCCTCACACAATAAACA+AGG	+	chr8_3:60892182-60892201	None:intergenic	30.0%
!!	TCACAATTATCAGTTCTGAA+AGG	+	chr8_3:60892425-60892444	None:intergenic	30.0%
	AACTTGTATAAAGATCAAGC+AGG	+	chr8_3:60892463-60892482	None:intergenic	30.0%
	TTTGTGATTAAAATGTCAGG+TGG	+	chr8_3:60892517-60892536	None:intergenic	30.0%
	CAAGGAATCAGAGATCAAAA+TGG	-	chr8_3:60890270-60890289	Msa1299590:three_prime_UTR	35.0%
!	GTTGCGTTTTATCGAAACTA+CGG	-	chr8_3:60890298-60890317	Msa1299590:three_prime_UTR	35.0%
	TTCTAGCATTGTTACGGATA+CGG	+	chr8_3:60890447-60890466	None:intergenic	35.0%
!	AAAGCGTTCTAGCATTGTTA+CGG	+	chr8_3:60890453-60890472	None:intergenic	35.0%
!	GAACAAGCTCGATTATGTTT+TGG	-	chr8_3:60890564-60890583	Msa1299590:three_prime_UTR	35.0%
	TATAATTGCTTTCGCACTGT+TGG	-	chr8_3:60890867-60890886	Msa1299590:intron	35.0%
	AATAAGCTGCTTATCCAATC+AGG	+	chr8_3:60890894-60890913	None:intergenic	35.0%
!!	TATAGGTTTAGTGTCGATGT+CGG	+	chr8_3:60891006-60891025	None:intergenic	35.0%
	TCAAATAAGCCAATCCAAAC+AGG	-	chr8_3:60891229-60891248	Msa1299590:intron	35.0%
	TTGTTGTGTGATGTAGATCT+TGG	-	chr8_3:60891306-60891325	Msa1299590:intron	35.0%
	GTAGATCTTGGTTAGATCAT+TGG	-	chr8_3:60891318-60891337	Msa1299590:intron	35.0%
	TTGGTTGTCTGTAACAATGT+TGG	-	chr8_3:60891337-60891356	Msa1299590:intron	35.0%
	TGGTTGTCTGTAACAATGTT+GGG	-	chr8_3:60891338-60891357	Msa1299590:intron	35.0%
	AAGAGTTACAAGCAGTTATG+GGG	+	chr8_3:60891525-60891544	None:intergenic	35.0%
	GAAAGAGTTACAAGCAGTTA+TGG	+	chr8_3:60891527-60891546	None:intergenic	35.0%
	TAGAGATCATCAAGTAATGG+AGG	-	chr8_3:60891621-60891640	Msa1299590:intron	35.0%
	AATTACACATTTCCGAACCA+TGG	+	chr8_3:60891656-60891675	None:intergenic	35.0%
	ATAATTGAGGATCCATTCAG+AGG	+	chr8_3:60891758-60891777	None:intergenic	35.0%
!	TTTTCACTCACAAGTCCTTT+CGG	-	chr8_3:60891962-60891981	Msa1299590:intron	35.0%
	CTCACACAATAAACAAGGAT+GGG	+	chr8_3:60892177-60892196	None:intergenic	35.0%
	TACACACAGCATCAAGTAAA+AGG	+	chr8_3:60892294-60892313	None:intergenic	35.0%
	AAAGTTTCGGTTGGATACAT+GGG	+	chr8_3:60892363-60892382	None:intergenic	35.0%
	GCATAGTTGGATCAAAGTTT+CGG	+	chr8_3:60892376-60892395	None:intergenic	35.0%
	TGATCCAACTATGCTTCTTA+TGG	-	chr8_3:60892382-60892401	Msa1299590:CDS	35.0%
!	TACACCATAAGAAGCATAGT+TGG	+	chr8_3:60892389-60892408	None:intergenic	35.0%
	AACTATGCTTCTTATGGTGT+AGG	-	chr8_3:60892388-60892407	Msa1299590:CDS	35.0%
	CAAGGAATCAGAGATCAAAA+TGG	-	chr8_3:60890270-60890289	Msa1299590:three_prime_UTR	35.0%
!	GTTGCGTTTTATCGAAACTA+CGG	-	chr8_3:60890298-60890317	Msa1299590:three_prime_UTR	35.0%
	TTCTAGCATTGTTACGGATA+CGG	+	chr8_3:60890447-60890466	None:intergenic	35.0%
!	AAAGCGTTCTAGCATTGTTA+CGG	+	chr8_3:60890453-60890472	None:intergenic	35.0%
!	GAACAAGCTCGATTATGTTT+TGG	-	chr8_3:60890564-60890583	Msa1299590:three_prime_UTR	35.0%
	TATAATTGCTTTCGCACTGT+TGG	-	chr8_3:60890867-60890886	Msa1299590:intron	35.0%
	AATAAGCTGCTTATCCAATC+AGG	+	chr8_3:60890894-60890913	None:intergenic	35.0%
!!	TATAGGTTTAGTGTCGATGT+CGG	+	chr8_3:60891006-60891025	None:intergenic	35.0%
	TCAAATAAGCCAATCCAAAC+AGG	-	chr8_3:60891229-60891248	Msa1299590:intron	35.0%
	TTGTTGTGTGATGTAGATCT+TGG	-	chr8_3:60891306-60891325	Msa1299590:intron	35.0%
	GTAGATCTTGGTTAGATCAT+TGG	-	chr8_3:60891318-60891337	Msa1299590:intron	35.0%
	TTGGTTGTCTGTAACAATGT+TGG	-	chr8_3:60891337-60891356	Msa1299590:intron	35.0%
	TGGTTGTCTGTAACAATGTT+GGG	-	chr8_3:60891338-60891357	Msa1299590:intron	35.0%
	AAGAGTTACAAGCAGTTATG+GGG	+	chr8_3:60891525-60891544	None:intergenic	35.0%
	GAAAGAGTTACAAGCAGTTA+TGG	+	chr8_3:60891527-60891546	None:intergenic	35.0%
	TAGAGATCATCAAGTAATGG+AGG	-	chr8_3:60891621-60891640	Msa1299590:intron	35.0%
	AATTACACATTTCCGAACCA+TGG	+	chr8_3:60891656-60891675	None:intergenic	35.0%
	ATAATTGAGGATCCATTCAG+AGG	+	chr8_3:60891758-60891777	None:intergenic	35.0%
!	TTTTCACTCACAAGTCCTTT+CGG	-	chr8_3:60891962-60891981	Msa1299590:intron	35.0%
	CTCACACAATAAACAAGGAT+GGG	+	chr8_3:60892177-60892196	None:intergenic	35.0%
	TACACACAGCATCAAGTAAA+AGG	+	chr8_3:60892294-60892313	None:intergenic	35.0%
	AAAGTTTCGGTTGGATACAT+GGG	+	chr8_3:60892363-60892382	None:intergenic	35.0%
	GCATAGTTGGATCAAAGTTT+CGG	+	chr8_3:60892376-60892395	None:intergenic	35.0%
	TGATCCAACTATGCTTCTTA+TGG	-	chr8_3:60892382-60892401	Msa1299590:CDS	35.0%
!	TACACCATAAGAAGCATAGT+TGG	+	chr8_3:60892389-60892408	None:intergenic	35.0%
	AACTATGCTTCTTATGGTGT+AGG	-	chr8_3:60892388-60892407	Msa1299590:CDS	35.0%
!!!	TTTTTGGTTGTGGGTGAAGA+TGG	+	chr8_3:60890223-60890242	None:intergenic	40.0%
!!!	CCTACTAGGTTTTTGGTTGT+GGG	+	chr8_3:60890232-60890251	None:intergenic	40.0%
	AAAAACCTAGTAGGCATCAC+CGG	-	chr8_3:60890238-60890257	Msa1299590:three_prime_UTR	40.0%
	TTGAGGAGGATGTTTAAGCA+TGG	-	chr8_3:60890523-60890542	Msa1299590:three_prime_UTR	40.0%
	TGTTCTGTGTCTCATCTAGA+AGG	+	chr8_3:60890549-60890568	None:intergenic	40.0%
	TAAGTCCATTCACCATGCTA+GGG	-	chr8_3:60890651-60890670	Msa1299590:exon	40.0%
	GTACGAAATCTCTTCGGATT+AGG	-	chr8_3:60890965-60890984	Msa1299590:intron	40.0%
	AAAATGATACAGGGCCTGTT+TGG	+	chr8_3:60891246-60891265	None:intergenic	40.0%
	ACATTTCCGAACCATGGTAA+AGG	+	chr8_3:60891650-60891669	None:intergenic	40.0%
	TATTGTTTCATAGGGTTGGG+AGG	-	chr8_3:60891882-60891901	Msa1299590:intron	40.0%
	TGAATCAACCCTAACCATGA+AGG	+	chr8_3:60891927-60891946	None:intergenic	40.0%
	TGTGAAGCGAAAGAACCTTA+AGG	-	chr8_3:60892003-60892022	Msa1299590:intron	40.0%
	GATATAAAACGGCTAGAGCA+AGG	+	chr8_3:60892106-60892125	None:intergenic	40.0%
	CCTCACACAATAAACAAGGA+TGG	+	chr8_3:60892178-60892197	None:intergenic	40.0%
!	CCATCCTTGTTTATTGTGTG+AGG	-	chr8_3:60892175-60892194	Msa1299590:CDS	40.0%
	CAAAGTTTCGGTTGGATACA+TGG	+	chr8_3:60892364-60892383	None:intergenic	40.0%
	AGTTGGATCAAAGTTTCGGT+TGG	+	chr8_3:60892372-60892391	None:intergenic	40.0%
!!	TTATCAGTTCTGAAAGGCAC+AGG	+	chr8_3:60892419-60892438	None:intergenic	40.0%
!!!	TTTTTGGTTGTGGGTGAAGA+TGG	+	chr8_3:60890223-60890242	None:intergenic	40.0%
!!!	CCTACTAGGTTTTTGGTTGT+GGG	+	chr8_3:60890232-60890251	None:intergenic	40.0%
	AAAAACCTAGTAGGCATCAC+CGG	-	chr8_3:60890238-60890257	Msa1299590:three_prime_UTR	40.0%
	TTGAGGAGGATGTTTAAGCA+TGG	-	chr8_3:60890523-60890542	Msa1299590:three_prime_UTR	40.0%
	TGTTCTGTGTCTCATCTAGA+AGG	+	chr8_3:60890549-60890568	None:intergenic	40.0%
	TAAGTCCATTCACCATGCTA+GGG	-	chr8_3:60890651-60890670	Msa1299590:exon	40.0%
	GTACGAAATCTCTTCGGATT+AGG	-	chr8_3:60890965-60890984	Msa1299590:intron	40.0%
	AAAATGATACAGGGCCTGTT+TGG	+	chr8_3:60891246-60891265	None:intergenic	40.0%
	ACATTTCCGAACCATGGTAA+AGG	+	chr8_3:60891650-60891669	None:intergenic	40.0%
	TATTGTTTCATAGGGTTGGG+AGG	-	chr8_3:60891882-60891901	Msa1299590:intron	40.0%
	TGAATCAACCCTAACCATGA+AGG	+	chr8_3:60891927-60891946	None:intergenic	40.0%
	TGTGAAGCGAAAGAACCTTA+AGG	-	chr8_3:60892003-60892022	Msa1299590:intron	40.0%
	GATATAAAACGGCTAGAGCA+AGG	+	chr8_3:60892106-60892125	None:intergenic	40.0%
	CCTCACACAATAAACAAGGA+TGG	+	chr8_3:60892178-60892197	None:intergenic	40.0%
!	CCATCCTTGTTTATTGTGTG+AGG	-	chr8_3:60892175-60892194	Msa1299590:CDS	40.0%
	CAAAGTTTCGGTTGGATACA+TGG	+	chr8_3:60892364-60892383	None:intergenic	40.0%
	AGTTGGATCAAAGTTTCGGT+TGG	+	chr8_3:60892372-60892391	None:intergenic	40.0%
!!	TTATCAGTTCTGAAAGGCAC+AGG	+	chr8_3:60892419-60892438	None:intergenic	40.0%
	ATGGTGAAATGCTGCGCTTT+AGG	+	chr8_3:60890204-60890223	None:intergenic	45.0%
	CCCACAACCAAAAACCTAGT+AGG	-	chr8_3:60890229-60890248	Msa1299590:three_prime_UTR	45.0%
!!!	GCCTACTAGGTTTTTGGTTG+TGG	+	chr8_3:60890233-60890252	None:intergenic	45.0%
!	GGTGATGCCTACTAGGTTTT+TGG	+	chr8_3:60890239-60890258	None:intergenic	45.0%
!!	TCCATATGAGAAGGAGCGTT+TGG	-	chr8_3:60890345-60890364	Msa1299590:three_prime_UTR	45.0%
	TCCAAACGCTCCTTCTCATA+TGG	+	chr8_3:60890349-60890368	None:intergenic	45.0%
!	TTTGGATGCTGAGTTGAAGC+TGG	-	chr8_3:60890363-60890382	Msa1299590:three_prime_UTR	45.0%
!	TGCTAGAACGCTTTTGACAC+TGG	-	chr8_3:60890459-60890478	Msa1299590:three_prime_UTR	45.0%
	TGGATGAGAAGAATCCTCGT+CGG	-	chr8_3:60890479-60890498	Msa1299590:three_prime_UTR	45.0%
	CAGACACTCGTCTTCAAATC+TGG	-	chr8_3:60890622-60890641	Msa1299590:three_prime_UTR	45.0%
	ACTCGTCTTCAAATCTGGCA+TGG	-	chr8_3:60890627-60890646	Msa1299590:three_prime_UTR	45.0%
	CTAAGTCCATTCACCATGCT+AGG	-	chr8_3:60890650-60890669	Msa1299590:exon	45.0%
	AAGAACCCTAGCATGGTGAA+TGG	+	chr8_3:60890659-60890678	None:intergenic	45.0%
	ACCATGCTAGGGTTCTTATC+AGG	-	chr8_3:60890662-60890681	Msa1299590:CDS	45.0%
	TTATGTGTCCAGTGTAGCGT+CGG	-	chr8_3:60891058-60891077	Msa1299590:intron	45.0%
	AATGGAGGTCTCCTTTACCA+TGG	-	chr8_3:60891636-60891655	Msa1299590:intron	45.0%
	AGGTCTCCTTTACCATGGTT+CGG	-	chr8_3:60891641-60891660	Msa1299590:intron	45.0%
	AGTGAACATCCCATCCTTCA+TGG	-	chr8_3:60891910-60891929	Msa1299590:intron	45.0%
	ACATCCCATCCTTCATGGTT+AGG	-	chr8_3:60891915-60891934	Msa1299590:intron	45.0%
	CATCCCATCCTTCATGGTTA+GGG	-	chr8_3:60891916-60891935	Msa1299590:intron	45.0%
	CAACCCTAACCATGAAGGAT+GGG	+	chr8_3:60891922-60891941	None:intergenic	45.0%
	TCAACCCTAACCATGAAGGA+TGG	+	chr8_3:60891923-60891942	None:intergenic	45.0%
	ATGGTGAAATGCTGCGCTTT+AGG	+	chr8_3:60890204-60890223	None:intergenic	45.0%
	CCCACAACCAAAAACCTAGT+AGG	-	chr8_3:60890229-60890248	Msa1299590:three_prime_UTR	45.0%
!!!	GCCTACTAGGTTTTTGGTTG+TGG	+	chr8_3:60890233-60890252	None:intergenic	45.0%
!	GGTGATGCCTACTAGGTTTT+TGG	+	chr8_3:60890239-60890258	None:intergenic	45.0%
!!	TCCATATGAGAAGGAGCGTT+TGG	-	chr8_3:60890345-60890364	Msa1299590:three_prime_UTR	45.0%
	TCCAAACGCTCCTTCTCATA+TGG	+	chr8_3:60890349-60890368	None:intergenic	45.0%
!	TTTGGATGCTGAGTTGAAGC+TGG	-	chr8_3:60890363-60890382	Msa1299590:three_prime_UTR	45.0%
!	TGCTAGAACGCTTTTGACAC+TGG	-	chr8_3:60890459-60890478	Msa1299590:three_prime_UTR	45.0%
	TGGATGAGAAGAATCCTCGT+CGG	-	chr8_3:60890479-60890498	Msa1299590:three_prime_UTR	45.0%
	CAGACACTCGTCTTCAAATC+TGG	-	chr8_3:60890622-60890641	Msa1299590:three_prime_UTR	45.0%
	ACTCGTCTTCAAATCTGGCA+TGG	-	chr8_3:60890627-60890646	Msa1299590:three_prime_UTR	45.0%
	CTAAGTCCATTCACCATGCT+AGG	-	chr8_3:60890650-60890669	Msa1299590:exon	45.0%
	AAGAACCCTAGCATGGTGAA+TGG	+	chr8_3:60890659-60890678	None:intergenic	45.0%
	ACCATGCTAGGGTTCTTATC+AGG	-	chr8_3:60890662-60890681	Msa1299590:CDS	45.0%
	TTATGTGTCCAGTGTAGCGT+CGG	-	chr8_3:60891058-60891077	Msa1299590:intron	45.0%
	AATGGAGGTCTCCTTTACCA+TGG	-	chr8_3:60891636-60891655	Msa1299590:intron	45.0%
	AGGTCTCCTTTACCATGGTT+CGG	-	chr8_3:60891641-60891660	Msa1299590:intron	45.0%
	AGTGAACATCCCATCCTTCA+TGG	-	chr8_3:60891910-60891929	Msa1299590:intron	45.0%
	ACATCCCATCCTTCATGGTT+AGG	-	chr8_3:60891915-60891934	Msa1299590:intron	45.0%
	CATCCCATCCTTCATGGTTA+GGG	-	chr8_3:60891916-60891935	Msa1299590:intron	45.0%
	CAACCCTAACCATGAAGGAT+GGG	+	chr8_3:60891922-60891941	None:intergenic	45.0%
	TCAACCCTAACCATGAAGGA+TGG	+	chr8_3:60891923-60891942	None:intergenic	45.0%
	TCCTTCTCATATGGACGACG+AGG	+	chr8_3:60890340-60890359	None:intergenic	50.0%
!	GATGCTGAGTTGAAGCTGGT+CGG	-	chr8_3:60890367-60890386	Msa1299590:three_prime_UTR	50.0%
	TTGAAGCTGGTCGGAGAGTA+TGG	-	chr8_3:60890376-60890395	Msa1299590:three_prime_UTR	50.0%
	AATCCTCGTCGGATCTTCGA+GGG	-	chr8_3:60890490-60890509	Msa1299590:three_prime_UTR	50.0%
!	TCGAGGGTGAAGCTCTTTTG+AGG	-	chr8_3:60890506-60890525	Msa1299590:three_prime_UTR	50.0%
!!	AGGGTGAAGCTCTTTTGAGG+AGG	-	chr8_3:60890509-60890528	Msa1299590:three_prime_UTR	50.0%
	GCCTGATAAGAACCCTAGCA+TGG	+	chr8_3:60890666-60890685	None:intergenic	50.0%
	CTAGGGTTCTTATCAGGCAG+AGG	-	chr8_3:60890668-60890687	Msa1299590:CDS	50.0%
!	TTATCAGGCAGAGGCACATC+AGG	-	chr8_3:60890677-60890696	Msa1299590:CDS	50.0%
	TTCGCACTGTTGGTCCTGAT+TGG	-	chr8_3:60890877-60890896	Msa1299590:intron	50.0%
!	TTCGGATTAGGTGTGTGTCC+CGG	-	chr8_3:60890977-60890996	Msa1299590:intron	50.0%
!!	TTAGTGTCGATGTCGGACAC+CGG	+	chr8_3:60890999-60891018	None:intergenic	50.0%
!!	TAGCGTCGGTGCTTCATAGA+TGG	-	chr8_3:60891072-60891091	Msa1299590:intron	50.0%
	GATACAGGGCCTGTTTGGAT+TGG	+	chr8_3:60891241-60891260	None:intergenic	50.0%
	TCACTCACAAGTCCTTTCGG+TGG	-	chr8_3:60891965-60891984	Msa1299590:intron	50.0%
	TTCTTTCGCTTCACACGACC+AGG	+	chr8_3:60891998-60892017	None:intergenic	50.0%
	TCCTTCTCATATGGACGACG+AGG	+	chr8_3:60890340-60890359	None:intergenic	50.0%
!	GATGCTGAGTTGAAGCTGGT+CGG	-	chr8_3:60890367-60890386	Msa1299590:three_prime_UTR	50.0%
	TTGAAGCTGGTCGGAGAGTA+TGG	-	chr8_3:60890376-60890395	Msa1299590:three_prime_UTR	50.0%
	AATCCTCGTCGGATCTTCGA+GGG	-	chr8_3:60890490-60890509	Msa1299590:three_prime_UTR	50.0%
!	TCGAGGGTGAAGCTCTTTTG+AGG	-	chr8_3:60890506-60890525	Msa1299590:three_prime_UTR	50.0%
!!	AGGGTGAAGCTCTTTTGAGG+AGG	-	chr8_3:60890509-60890528	Msa1299590:three_prime_UTR	50.0%
	GCCTGATAAGAACCCTAGCA+TGG	+	chr8_3:60890666-60890685	None:intergenic	50.0%
	CTAGGGTTCTTATCAGGCAG+AGG	-	chr8_3:60890668-60890687	Msa1299590:CDS	50.0%
!	TTATCAGGCAGAGGCACATC+AGG	-	chr8_3:60890677-60890696	Msa1299590:CDS	50.0%
	TTCGCACTGTTGGTCCTGAT+TGG	-	chr8_3:60890877-60890896	Msa1299590:intron	50.0%
!	TTCGGATTAGGTGTGTGTCC+CGG	-	chr8_3:60890977-60890996	Msa1299590:intron	50.0%
!!	TTAGTGTCGATGTCGGACAC+CGG	+	chr8_3:60890999-60891018	None:intergenic	50.0%
!!	TAGCGTCGGTGCTTCATAGA+TGG	-	chr8_3:60891072-60891091	Msa1299590:intron	50.0%
	GATACAGGGCCTGTTTGGAT+TGG	+	chr8_3:60891241-60891260	None:intergenic	50.0%
	TCACTCACAAGTCCTTTCGG+TGG	-	chr8_3:60891965-60891984	Msa1299590:intron	50.0%
	TTCTTTCGCTTCACACGACC+AGG	+	chr8_3:60891998-60892017	None:intergenic	50.0%
	AACCTAGTAGGCATCACCGG+CGG	-	chr8_3:60890241-60890260	Msa1299590:three_prime_UTR	55.0%
	GCCTCGTCGTCCATATGAGA+AGG	-	chr8_3:60890336-60890355	Msa1299590:three_prime_UTR	55.0%
	GAATCCTCGTCGGATCTTCG+AGG	-	chr8_3:60890489-60890508	Msa1299590:three_prime_UTR	55.0%
!!	TAGTGTCGATGTCGGACACC+GGG	+	chr8_3:60890998-60891017	None:intergenic	55.0%
!!	ATGAAGCACCGACGCTACAC+TGG	+	chr8_3:60891069-60891088	None:intergenic	55.0%
	GTTTCATAGGGTTGGGAGGC+AGG	-	chr8_3:60891886-60891905	Msa1299590:intron	55.0%
	CTCACAAGTCCTTTCGGTGG+TGG	-	chr8_3:60891968-60891987	Msa1299590:intron	55.0%
	CCTTCTTGGCTGCAGCCTTA+AGG	+	chr8_3:60892021-60892040	None:intergenic	55.0%
	CCTTAAGGCTGCAGCCAAGA+AGG	-	chr8_3:60892018-60892037	Msa1299590:intron	55.0%
	ATCACCACCGGAAGCCTTCT+TGG	+	chr8_3:60892035-60892054	None:intergenic	55.0%
	AAGAAGGCTTCCGGTGGTGA+TGG	-	chr8_3:60892034-60892053	Msa1299590:intron	55.0%
!!	TTCCGGTGGTGATGGTGATG+AGG	-	chr8_3:60892042-60892061	Msa1299590:CDS	55.0%
	CTCCTCATCACCATCACCAC+CGG	+	chr8_3:60892047-60892066	None:intergenic	55.0%
	AACCTAGTAGGCATCACCGG+CGG	-	chr8_3:60890241-60890260	Msa1299590:three_prime_UTR	55.0%
	GCCTCGTCGTCCATATGAGA+AGG	-	chr8_3:60890336-60890355	Msa1299590:three_prime_UTR	55.0%
	GAATCCTCGTCGGATCTTCG+AGG	-	chr8_3:60890489-60890508	Msa1299590:three_prime_UTR	55.0%
!!	TAGTGTCGATGTCGGACACC+GGG	+	chr8_3:60890998-60891017	None:intergenic	55.0%
!!	ATGAAGCACCGACGCTACAC+TGG	+	chr8_3:60891069-60891088	None:intergenic	55.0%
	GTTTCATAGGGTTGGGAGGC+AGG	-	chr8_3:60891886-60891905	Msa1299590:intron	55.0%
	CTCACAAGTCCTTTCGGTGG+TGG	-	chr8_3:60891968-60891987	Msa1299590:intron	55.0%
	CCTTCTTGGCTGCAGCCTTA+AGG	+	chr8_3:60892021-60892040	None:intergenic	55.0%
	CCTTAAGGCTGCAGCCAAGA+AGG	-	chr8_3:60892018-60892037	Msa1299590:intron	55.0%
	ATCACCACCGGAAGCCTTCT+TGG	+	chr8_3:60892035-60892054	None:intergenic	55.0%
	AAGAAGGCTTCCGGTGGTGA+TGG	-	chr8_3:60892034-60892053	Msa1299590:intron	55.0%
!!	TTCCGGTGGTGATGGTGATG+AGG	-	chr8_3:60892042-60892061	Msa1299590:CDS	55.0%
	CTCCTCATCACCATCACCAC+CGG	+	chr8_3:60892047-60892066	None:intergenic	55.0%
	TTCGCTGCAAGCGCGAGCTT+TGG	-	chr8_3:60890401-60890420	Msa1299590:three_prime_UTR	60.0%
!!	CTGCAAGCGCGAGCTTTGGA+GGG	-	chr8_3:60890405-60890424	Msa1299590:three_prime_UTR	60.0%
	TCACCCTCGAAGATCCGACG+AGG	+	chr8_3:60890496-60890515	None:intergenic	60.0%
	CCAGGAAGACCACCACCGAA+AGG	+	chr8_3:60891980-60891999	None:intergenic	60.0%
!	CCTTTCGGTGGTGGTCTTCC+TGG	-	chr8_3:60891977-60891996	Msa1299590:intron	60.0%
	GCTGCAGCCAAGAAGGCTTC+CGG	-	chr8_3:60892025-60892044	Msa1299590:intron	60.0%
!!	CGGTGGTGATGGTGATGAGG+AGG	-	chr8_3:60892045-60892064	Msa1299590:CDS	60.0%
	TTCGCTGCAAGCGCGAGCTT+TGG	-	chr8_3:60890401-60890420	Msa1299590:three_prime_UTR	60.0%
!!	CTGCAAGCGCGAGCTTTGGA+GGG	-	chr8_3:60890405-60890424	Msa1299590:three_prime_UTR	60.0%
	TCACCCTCGAAGATCCGACG+AGG	+	chr8_3:60890496-60890515	None:intergenic	60.0%
	CCAGGAAGACCACCACCGAA+AGG	+	chr8_3:60891980-60891999	None:intergenic	60.0%
!	CCTTTCGGTGGTGGTCTTCC+TGG	-	chr8_3:60891977-60891996	Msa1299590:intron	60.0%
	GCTGCAGCCAAGAAGGCTTC+CGG	-	chr8_3:60892025-60892044	Msa1299590:intron	60.0%
!!	CGGTGGTGATGGTGATGAGG+AGG	-	chr8_3:60892045-60892064	Msa1299590:CDS	60.0%
	TGCCGCCGGTGATGCCTACT+AGG	+	chr8_3:60890246-60890265	None:intergenic	65.0%
	TGATTCCTTGCCGCTGCCGC+CGG	+	chr8_3:60890260-60890279	None:intergenic	65.0%
!	GCTGCAAGCGCGAGCTTTGG+AGG	-	chr8_3:60890404-60890423	Msa1299590:three_prime_UTR	65.0%
	GCAGCCAAGAAGGCTTCCGG+TGG	-	chr8_3:60892028-60892047	Msa1299590:intron	65.0%
	TGCCGCCGGTGATGCCTACT+AGG	+	chr8_3:60890246-60890265	None:intergenic	65.0%
	TGATTCCTTGCCGCTGCCGC+CGG	+	chr8_3:60890260-60890279	None:intergenic	65.0%
!	GCTGCAAGCGCGAGCTTTGG+AGG	-	chr8_3:60890404-60890423	Msa1299590:three_prime_UTR	65.0%
	GCAGCCAAGAAGGCTTCCGG+TGG	-	chr8_3:60892028-60892047	Msa1299590:intron	65.0%
	GTAGGCATCACCGGCGGCAG+CGG	-	chr8_3:60890247-60890266	Msa1299590:three_prime_UTR	70.0%
	GTAGGCATCACCGGCGGCAG+CGG	-	chr8_3:60890247-60890266	Msa1299590:three_prime_UTR	70.0%
	CATCACCGGCGGCAGCGGCA+AGG	-	chr8_3:60890252-60890271	Msa1299590:three_prime_UTR	75.0%
	CATCACCGGCGGCAGCGGCA+AGG	-	chr8_3:60890252-60890271	Msa1299590:three_prime_UTR	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr8_3	gene	60890172	60892563	60890172	ID=Msa1299590;Name=Msa1299590
chr8_3	mRNA	60890172	60892563	60890172	ID=Msa1299590-mRNA-1;Parent=Msa1299590;Name=Msa1299590-mRNA-1;_AED=0.01;_eAED=0.01;_QI=117\|1\|1\|1\|1\|1\|2\|485\|197
chr8_3	exon	60890172	60890840	60890172	ID=Msa1299590-mRNA-1:exon:17922;Parent=Msa1299590-mRNA-1
chr8_3	exon	60892037	60892563	60892037	ID=Msa1299590-mRNA-1:exon:17921;Parent=Msa1299590-mRNA-1
chr8_3	five_prime_UTR	60892447	60892563	60892447	ID=Msa1299590-mRNA-1:five_prime_utr;Parent=Msa1299590-mRNA-1
chr8_3	CDS	60892037	60892446	60892037	ID=Msa1299590-mRNA-1:cds;Parent=Msa1299590-mRNA-1
chr8_3	CDS	60890657	60890840	60890657	ID=Msa1299590-mRNA-1:cds;Parent=Msa1299590-mRNA-1
chr8_3	three_prime_UTR	60890172	60890656	60890172	ID=Msa1299590-mRNA-1:three_prime_utr;Parent=Msa1299590-mRNA-1

Gene Sequence

>Msa1299590

ATGGTGCACGTTGCGTTTTATCGAAACTACGGCAAAACATTCAAGAAGCCTCGTCGTCCATATGAGAAGGAGCGTTTGGATGCTGAGTTGAAGCTGGTCGGAGAGTATGGTCTTCGCTGCAAGCGCGAGCTTTGGAGGGTTCAATACGCTCTTAGCCGTATCCGTAACAATGCTAGAACGCTTTTGACACTGGATGAGAAGAATCCTCGTCGGATCTTCGAGGGTGAAGCTCTTTTGAGGAGGATGTTTAAGCATGGCCTTCTAGATGAGACACAGAACAAGCTCGATTATGTTTTGGCTCTTACTGTTGAGAATTTTCTCGAGCGTCGTCTTCAGACACTCGTCTTCAAATCTGGCATGGCTAAGTCCATTCACCATGCTAGGGTTCTTATCAGGCAGAGGCACATCAGGGTTGGGAGGCAGGTAGTGAACATCCCATCCTTCATGGTTAGGGTTGATTCACAGAAGCACATTGACTTTTCACTCACAAGTCCTTTCGGTGGTGGTCTTCCTGGTCGTGTGAAGCGAAAGAACCTTAAGGCTGCAGCCAAGAAGGCTTCCGGTGGTGATGGTGATGAGGAGGATGAAGATTAA

Protein sequence

>Msa1299590

MVHVAFYRNYGKTFKKPRRPYEKERLDAELKLVGEYGLRCKRELWRVQYALSRIRNNARTLLTLDEKNPRRIFEGEALLRRMFKHGLLDETQNKLDYVLALTVENFLERRLQTLVFKSGMAKSIHHARVLIRQRHIRVGRQVVNIPSFMVRVDSQKHIDFSLTSPFGGGLPGRVKRKNLKAAAKKASGGDGDEEDED*