AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1298650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1298650 MtrunA17_Chr4g0058901 95.820 311 12 1 1 310 1 311 0.0 622
Msa1298650 MtrunA17_Chr4g0069121 36.047 258 146 9 31 285 34 275 2.96e-46 158
Msa1298650 MtrunA17_Chr5g0415341 28.467 274 166 10 14 274 10 266 1.14e-25 103
Msa1298650 MtrunA17_Chr8g0381971 27.305 282 167 9 5 274 7 262 1.40e-23 98.2
Msa1298650 MtrunA17_Chr2g0288891 27.863 262 159 10 31 279 24 268 6.34e-19 85.5
Msa1298650 MtrunA17_Chr4g0075211 24.567 289 178 10 31 304 38 301 3.23e-15 75.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1298650 AT5G50290.1 63.729 295 100 3 12 303 3 293 2.76e-144 409
Msa1298650 AT3G17350.1 28.315 279 190 5 30 307 30 299 9.76e-39 139
Msa1298650 AT3G17350.2 31.452 248 158 6 30 274 30 268 7.19e-38 136
Msa1298650 AT1G10380.1 29.010 293 175 11 29 306 27 301 1.85e-25 103
Msa1298650 AT1G10380.2 30.588 255 153 9 31 274 29 270 4.61e-25 102
Msa1298650 AT1G11915.1 28.920 287 169 10 6 274 2 271 2.89e-22 95.5

Find 102 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTGCATGGCAAATGTTTATC+AGG 0.193615 8_3:+59476144 None:intergenic
TTGCCATGCAGAAATGTTTC+TGG 0.200621 8_3:-59476132 Msa1298650:CDS
GCATACTATGCCATACTTCT+TGG 0.280548 8_3:+59475006 None:intergenic
TCGGGTGTTGGGTTCATGTA+TGG 0.280996 8_3:+59476222 None:intergenic
GGACCTAGTGATTGGGCTTA+TGG 0.283172 8_3:-59475910 Msa1298650:CDS
TGATCATTTGTGTGTAAATA+AGG 0.286721 8_3:+59474795 None:intergenic
CCTCGTTCACCTTTGTTTCA+AGG 0.290171 8_3:-59476171 Msa1298650:CDS
TCTTGCTCCCGATGATAATA+AGG 0.303286 8_3:+59475392 None:intergenic
ATGCAACTATCATCATAAAC+TGG 0.307234 8_3:-59474987 Msa1298650:three_prime_UTR
ATGGAGGGTACTGAAGAATT+TGG 0.314054 8_3:+59476566 None:intergenic
TGTAAATAAGGTTAGGGATA+TGG 0.315987 8_3:+59474807 None:intergenic
TGTGTCTTATGAAGCTATTA+AGG 0.353594 8_3:-59476004 Msa1298650:CDS
AGAACAAAGTATTCAATTTG+TGG 0.358588 8_3:-59474764 Msa1298650:three_prime_UTR
CGGGTGTTGGGTTCATGTAT+GGG 0.358994 8_3:+59476223 None:intergenic
GACGGAGAAACCGTTGCCTT+TGG 0.360342 8_3:+59476260 None:intergenic
TTATAGTGTTGCACCTTTGA+AGG 0.365560 8_3:-59475938 Msa1298650:CDS
GGGCTTATGGGATCCGTGTT+AGG 0.376551 8_3:-59475897 Msa1298650:CDS
TGTGGTGCTTGTCAGGCTAC+TGG 0.380371 8_3:-59475847 Msa1298650:CDS
GACCTAGTGATTGGGCTTAT+GGG 0.386373 8_3:-59475909 Msa1298650:CDS
ATTTGTGTGTAAATAAGGTT+AGG 0.388419 8_3:+59474800 None:intergenic
TTGAAAAGTACCAAGAAGTA+TGG 0.396215 8_3:-59475016 Msa1298650:exon
GGTATGCGTAATCTATTTGT+AGG 0.399971 8_3:+59476340 None:intergenic
TGTGCAAATTTATTGATGTT+GGG 0.411845 8_3:+59476633 None:intergenic
AGTTGTGGGTATGGTTCTGA+TGG 0.412932 8_3:-59475820 Msa1298650:CDS
GTTGCACCTTTGAAGGTTGA+TGG 0.422946 8_3:-59475931 Msa1298650:CDS
AACCGTTGCCTTTGGTTCCT+AGG 0.424965 8_3:+59476268 None:intergenic
ATGAGGTTGAAAATGTTTGC+AGG 0.430766 8_3:-59475363 Msa1298650:intron
AAGAGTAAGTCACGGAAACC+TGG 0.435538 8_3:+59476414 None:intergenic
TGAAAACGTTGTCGGGTGTT+GGG 0.444054 8_3:+59476211 None:intergenic
ATGAAAACGTTGTCGGGTGT+TGG 0.445293 8_3:+59476210 None:intergenic
GTGTGCAAATTTATTGATGT+TGG 0.445999 8_3:+59476632 None:intergenic
ACTGGTGGTAGTTGTGGGTA+TGG 0.446197 8_3:-59475829 Msa1298650:CDS
CGTGTTAGGTATTCTGTTCA+AGG 0.451485 8_3:-59475883 Msa1298650:CDS
GTGTCTTATGAAGCTATTAA+GGG 0.454558 8_3:-59476003 Msa1298650:CDS
TGTCATCCATGCTAGCATAT+AGG 0.458562 8_3:+59475050 None:intergenic
AAAGTATTCAATTTGTGGAT+AGG 0.461355 8_3:-59474759 Msa1298650:three_prime_UTR
AAGTATTCAATTTGTGGATA+GGG 0.467903 8_3:-59474758 Msa1298650:three_prime_UTR
TGCAGTGGCCTTATTATCAT+CGG 0.468684 8_3:-59475400 Msa1298650:intron
AGGCTACTGGTGGTAGTTGT+GGG 0.472568 8_3:-59475834 Msa1298650:CDS
CAGGCTACTGGTGGTAGTTG+TGG 0.481186 8_3:-59475835 Msa1298650:CDS
CTCATGTTCCACGTAACCTC+AGG 0.481711 8_3:-59476375 Msa1298650:CDS
GCAGTGGCCTTATTATCATC+GGG 0.491551 8_3:-59475399 Msa1298650:intron
TACCCATTTGCCCTTCAAAA+CGG 0.494235 8_3:-59476447 Msa1298650:CDS
ACTTCAAATTGTGACTCAGC+AGG 0.494437 8_3:-59475760 Msa1298650:intron
GTTGTGGGTATGGTTCTGAT+GGG 0.495945 8_3:-59475819 Msa1298650:CDS
AATGAGCATGAAAACGTTGT+CGG 0.501170 8_3:+59476203 None:intergenic
ATGAGCATGAAAACGTTGTC+GGG 0.504088 8_3:+59476204 None:intergenic
ATGCAGAAATGTTTCTGGTA+TGG 0.510318 8_3:-59476127 Msa1298650:CDS
TTGTCCTGCTTGGAATATGA+TGG 0.524635 8_3:-59476085 Msa1298650:CDS
AGTACTATGATTGTCCTGCT+TGG 0.525763 8_3:-59476095 Msa1298650:CDS
TTTGTGTGTAAATAAGGTTA+GGG 0.527549 8_3:+59474801 None:intergenic
CGGGAGCAAGAAGGCCTATG+AGG 0.531175 8_3:-59475380 Msa1298650:CDS
GTGTTGTTAGAACAACTTGA+AGG 0.536835 8_3:+59476504 None:intergenic
TTCATGTATGGGGTTCGCCA+CGG 0.537725 8_3:+59476234 None:intergenic
TGCAGAAATGTTTCTGGTAT+GGG 0.539299 8_3:-59476126 Msa1298650:CDS
GTGCAAATTTATTGATGTTG+GGG 0.540053 8_3:+59476634 None:intergenic
CTAAGTAAACTTGAGTGTGA+AGG 0.541274 8_3:-59475973 Msa1298650:CDS
AGGTTGATGGACCTAGTGAT+TGG 0.542105 8_3:-59475918 Msa1298650:CDS
ATAATATAATGATTAGATGA+TGG 0.543194 8_3:+59476547 None:intergenic
GGTTGATGGACCTAGTGATT+GGG 0.544352 8_3:-59475917 Msa1298650:CDS
TAGCATGGATGACAACCAAC+TGG 0.545560 8_3:-59475041 Msa1298650:CDS
ACGTGCGATACACTAGTCCT+AGG 0.550022 8_3:-59476285 Msa1298650:CDS
GAACTGATTATTGTCAAAGT+AGG 0.551503 8_3:+59474730 None:intergenic
TCAGGGAAGCCTTGAAACAA+AGG 0.553085 8_3:+59476162 None:intergenic
TAAGTAAACTTGAGTGTGAA+GGG 0.553358 8_3:-59475972 Msa1298650:CDS
CTAGGTCCATCAACCTTCAA+AGG 0.558381 8_3:+59475925 None:intergenic
TTTGCCCTTCAAAACGGATG+TGG 0.559842 8_3:-59476441 Msa1298650:CDS
ATTAGACAAGTTTGTATGTG+TGG 0.562572 8_3:-59475796 Msa1298650:CDS
GGGTGTTGGGTTCATGTATG+GGG 0.564735 8_3:+59476224 None:intergenic
GCTCGTGAAGTGTGAGAGCT+TGG 0.565272 8_3:+59476319 None:intergenic
TGGCCCATCATATTCCAAGC+AGG 0.569795 8_3:+59476081 None:intergenic
TGCATGGCAAATGTTTATCA+GGG 0.573889 8_3:+59476145 None:intergenic
ATATAATGATTAGATGATGG+AGG 0.576829 8_3:+59476550 None:intergenic
TAGGACTCTGTAGGAACCTG+AGG 0.590231 8_3:+59476359 None:intergenic
GTGTTAGGTATTCTGTTCAA+GGG 0.592070 8_3:-59475882 Msa1298650:CDS
TGGGGTTCGCCACGGTTCGA+CGG 0.594648 8_3:+59476242 None:intergenic
CAAAACGGATGTGGCCACCC+AGG 0.596075 8_3:-59476432 Msa1298650:CDS
ATCCCATAAGCCCAATCACT+AGG 0.600682 8_3:+59475907 None:intergenic
TATAATGATTAGATGATGGA+GGG 0.605453 8_3:+59476551 None:intergenic
AACACATGTAGATCATATTG+TGG 0.606078 8_3:-59476486 Msa1298650:CDS
TGCAACTATCATCATAAACT+GGG 0.609425 8_3:-59474986 Msa1298650:three_prime_UTR
ACGGTTTCTCCGTCGAACCG+TGG 0.613058 8_3:-59476251 Msa1298650:CDS
GACACAGCACAACACTCAGG+TGG 0.615299 8_3:+59476021 None:intergenic
TGTCCTGCTTGGAATATGAT+GGG 0.617971 8_3:-59476084 Msa1298650:CDS
TATTATCATCGGGAGCAAGA+AGG 0.618389 8_3:-59475389 Msa1298650:CDS
CCTTGAAACAAAGGTGAACG+AGG 0.620322 8_3:+59476171 None:intergenic
AGAGTAAGTCACGGAAACCT+GGG 0.621258 8_3:+59476415 None:intergenic
TGTCTTATGAAGCTATTAAG+GGG 0.625096 8_3:-59476002 Msa1298650:CDS
GTCCTAGGAACCAAAGGCAA+CGG 0.628622 8_3:-59476270 Msa1298650:CDS
CTTGAACAGAATACCTAACA+CGG 0.629047 8_3:+59475884 None:intergenic
TGTAGGAACCTGAGGTTACG+TGG 0.629711 8_3:+59476367 None:intergenic
ATAAGGTTAGGGATATGGCT+AGG 0.632415 8_3:+59474812 None:intergenic
ATCTATTTGTAGGACTCTGT+AGG 0.633162 8_3:+59476350 None:intergenic
GGTGCTTGTCAGGCTACTGG+TGG 0.639415 8_3:-59475844 Msa1298650:CDS
TGTTGTTAGAACAACTTGAA+GGG 0.642633 8_3:+59476505 None:intergenic
ACACTAGTCCTAGGAACCAA+AGG 0.644760 8_3:-59476276 Msa1298650:CDS
ACACAGCACAACACTCAGGT+GGG 0.648394 8_3:+59476022 None:intergenic
TAAGACACAGCACAACACTC+AGG 0.658139 8_3:+59476018 None:intergenic
TTATGCAGAAGAGTAAGTCA+CGG 0.661971 8_3:+59476406 None:intergenic
ATACCAGAAACATTTCTGCA+TGG 0.663576 8_3:+59476129 None:intergenic
GTATCGCACGTAGACATGTG+TGG 0.680881 8_3:+59476297 None:intergenic
GTAAGTCACGGAAACCTGGG+TGG 0.745818 8_3:+59476418 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATTGATATTATTTATCAT+CGG + chr8_3:59475873-59475892 None:intergenic 10.0%
!! ATGATAAATAATATCAATTA+CGG - chr8_3:59475873-59475892 Msa1298650:CDS 10.0%
!! TAATTGATATTATTTATCAT+CGG + chr8_3:59475873-59475892 None:intergenic 10.0%
!! ATGATAAATAATATCAATTA+CGG - chr8_3:59475873-59475892 Msa1298650:CDS 10.0%
!! ATAATATAATGATTAGATGA+TGG + chr8_3:59474849-59474868 None:intergenic 15.0%
!!! TCAAGATTCTATTAATTTTT+TGG - chr8_3:59475668-59475687 Msa1298650:intron 15.0%
!!! AAAATAACTTATTTTAGAGA+GGG + chr8_3:59475696-59475715 None:intergenic 15.0%
!!! TAAAATAACTTATTTTAGAG+AGG + chr8_3:59475697-59475716 None:intergenic 15.0%
!! AATTGATATTATTTATCATC+GGG + chr8_3:59475872-59475891 None:intergenic 15.0%
!! ATTTCATTACTTTGTTAATT+AGG - chr8_3:59476102-59476121 Msa1298650:CDS 15.0%
!!! ATTTTTCAATTTTTTTCCTA+GGG + chr8_3:59476530-59476549 None:intergenic 15.0%
!!! TATTTTTCAATTTTTTTCCT+AGG + chr8_3:59476531-59476550 None:intergenic 15.0%
!! ATAATATAATGATTAGATGA+TGG + chr8_3:59474849-59474868 None:intergenic 15.0%
!!! TCAAGATTCTATTAATTTTT+TGG - chr8_3:59475668-59475687 Msa1298650:intron 15.0%
!!! AAAATAACTTATTTTAGAGA+GGG + chr8_3:59475696-59475715 None:intergenic 15.0%
!!! TAAAATAACTTATTTTAGAG+AGG + chr8_3:59475697-59475716 None:intergenic 15.0%
!! AATTGATATTATTTATCATC+GGG + chr8_3:59475872-59475891 None:intergenic 15.0%
!! ATTTCATTACTTTGTTAATT+AGG - chr8_3:59476102-59476121 Msa1298650:CDS 15.0%
!!! ATTTTTCAATTTTTTTCCTA+GGG + chr8_3:59476530-59476549 None:intergenic 15.0%
!!! TATTTTTCAATTTTTTTCCT+AGG + chr8_3:59476531-59476550 None:intergenic 15.0%
!!! AAATAACTTATTTTAGAGAG+GGG + chr8_3:59475695-59475714 None:intergenic 20.0%
!! TCAAATTGTGAAACAATATT+TGG + chr8_3:59475799-59475818 None:intergenic 20.0%
!! ATTGTTTCACAATTTGAATT+AGG - chr8_3:59475802-59475821 Msa1298650:CDS 20.0%
!! TTGTTTCACAATTTGAATTA+GGG - chr8_3:59475803-59475822 Msa1298650:CDS 20.0%
!! ATTGATATTATTTATCATCG+GGG + chr8_3:59475871-59475890 None:intergenic 20.0%
!! TACATAACATCTTTCAATTA+AGG + chr8_3:59476190-59476209 None:intergenic 20.0%
!!! TTTCATTTGATTTGCTAAAA+TGG + chr8_3:59476267-59476286 None:intergenic 20.0%
!! TTAGCAAATCAAATGAAAAT+TGG - chr8_3:59476269-59476288 Msa1298650:CDS 20.0%
!! TAGCAAATCAAATGAAAATT+GGG - chr8_3:59476270-59476289 Msa1298650:CDS 20.0%
!!! TCATATGTAACTTTTCTTTT+TGG - chr8_3:59476307-59476326 Msa1298650:CDS 20.0%
!!! CATATGTAACTTTTCTTTTT+GGG - chr8_3:59476308-59476327 Msa1298650:CDS 20.0%
!!! AAATAACTTATTTTAGAGAG+GGG + chr8_3:59475695-59475714 None:intergenic 20.0%
!! TCAAATTGTGAAACAATATT+TGG + chr8_3:59475799-59475818 None:intergenic 20.0%
!! ATTGTTTCACAATTTGAATT+AGG - chr8_3:59475802-59475821 Msa1298650:CDS 20.0%
!! TTGTTTCACAATTTGAATTA+GGG - chr8_3:59475803-59475822 Msa1298650:CDS 20.0%
!! ATTGATATTATTTATCATCG+GGG + chr8_3:59475871-59475890 None:intergenic 20.0%
!! TACATAACATCTTTCAATTA+AGG + chr8_3:59476190-59476209 None:intergenic 20.0%
!!! TTTCATTTGATTTGCTAAAA+TGG + chr8_3:59476267-59476286 None:intergenic 20.0%
!! TTAGCAAATCAAATGAAAAT+TGG - chr8_3:59476269-59476288 Msa1298650:CDS 20.0%
!! TAGCAAATCAAATGAAAATT+GGG - chr8_3:59476270-59476289 Msa1298650:CDS 20.0%
!!! TCATATGTAACTTTTCTTTT+TGG - chr8_3:59476307-59476326 Msa1298650:CDS 20.0%
!!! CATATGTAACTTTTCTTTTT+GGG - chr8_3:59476308-59476327 Msa1298650:CDS 20.0%
! TGTGCAAATTTATTGATGTT+GGG + chr8_3:59474763-59474782 None:intergenic 25.0%
!! TGATGATATTTTGCTTGATT+TGG + chr8_3:59474798-59474817 None:intergenic 25.0%
!!! TATAATGATTAGATGATGGA+GGG + chr8_3:59474845-59474864 None:intergenic 25.0%
!! ATATAATGATTAGATGATGG+AGG + chr8_3:59474846-59474865 None:intergenic 25.0%
! ATTGTGAAACAATATTTGGT+TGG + chr8_3:59475795-59475814 None:intergenic 25.0%
!! TATGCTGTATATTTTCAAAG+TGG - chr8_3:59476131-59476150 Msa1298650:CDS 25.0%
! ACATCTTTCAATTAAGGAAT+AGG + chr8_3:59476184-59476203 None:intergenic 25.0%
! AGCAAATCAAATGAAAATTG+GGG - chr8_3:59476271-59476290 Msa1298650:CDS 25.0%
!!! TTGTACATGCCTTTTTTTTT+TGG - chr8_3:59476444-59476463 Msa1298650:CDS 25.0%
! TTTGTGTGTAAATAAGGTTA+GGG + chr8_3:59476595-59476614 None:intergenic 25.0%
! ATTTGTGTGTAAATAAGGTT+AGG + chr8_3:59476596-59476615 None:intergenic 25.0%
! TGATCATTTGTGTGTAAATA+AGG + chr8_3:59476601-59476620 None:intergenic 25.0%
!! AGAACAAAGTATTCAATTTG+TGG - chr8_3:59476629-59476648 Msa1298650:five_prime_UTR 25.0%
!! AAAGTATTCAATTTGTGGAT+AGG - chr8_3:59476634-59476653 Msa1298650:five_prime_UTR 25.0%
! AAGTATTCAATTTGTGGATA+GGG - chr8_3:59476635-59476654 Msa1298650:five_prime_UTR 25.0%
! TGTGCAAATTTATTGATGTT+GGG + chr8_3:59474763-59474782 None:intergenic 25.0%
!! TGATGATATTTTGCTTGATT+TGG + chr8_3:59474798-59474817 None:intergenic 25.0%
!!! TATAATGATTAGATGATGGA+GGG + chr8_3:59474845-59474864 None:intergenic 25.0%
!! ATATAATGATTAGATGATGG+AGG + chr8_3:59474846-59474865 None:intergenic 25.0%
! ATTGTGAAACAATATTTGGT+TGG + chr8_3:59475795-59475814 None:intergenic 25.0%
!! TATGCTGTATATTTTCAAAG+TGG - chr8_3:59476131-59476150 Msa1298650:CDS 25.0%
! ACATCTTTCAATTAAGGAAT+AGG + chr8_3:59476184-59476203 None:intergenic 25.0%
! AGCAAATCAAATGAAAATTG+GGG - chr8_3:59476271-59476290 Msa1298650:CDS 25.0%
!!! TTGTACATGCCTTTTTTTTT+TGG - chr8_3:59476444-59476463 Msa1298650:CDS 25.0%
! TTTGTGTGTAAATAAGGTTA+GGG + chr8_3:59476595-59476614 None:intergenic 25.0%
! ATTTGTGTGTAAATAAGGTT+AGG + chr8_3:59476596-59476615 None:intergenic 25.0%
! TGATCATTTGTGTGTAAATA+AGG + chr8_3:59476601-59476620 None:intergenic 25.0%
!! AGAACAAAGTATTCAATTTG+TGG - chr8_3:59476629-59476648 Msa1298650:five_prime_UTR 25.0%
!! AAAGTATTCAATTTGTGGAT+AGG - chr8_3:59476634-59476653 Msa1298650:five_prime_UTR 25.0%
! AAGTATTCAATTTGTGGATA+GGG - chr8_3:59476635-59476654 Msa1298650:five_prime_UTR 25.0%
GTGCAAATTTATTGATGTTG+GGG + chr8_3:59474762-59474781 None:intergenic 30.0%
GTGTGCAAATTTATTGATGT+TGG + chr8_3:59474764-59474783 None:intergenic 30.0%
TGTTGTTAGAACAACTTGAA+GGG + chr8_3:59474891-59474910 None:intergenic 30.0%
AACACATGTAGATCATATTG+TGG - chr8_3:59474907-59474926 Msa1298650:three_prime_UTR 30.0%
TGTGTCTTATGAAGCTATTA+AGG - chr8_3:59475389-59475408 Msa1298650:CDS 30.0%
GTGTCTTATGAAGCTATTAA+GGG - chr8_3:59475390-59475409 Msa1298650:CDS 30.0%
TGTCTTATGAAGCTATTAAG+GGG - chr8_3:59475391-59475410 Msa1298650:CDS 30.0%
TAAGTAAACTTGAGTGTGAA+GGG - chr8_3:59475421-59475440 Msa1298650:intron 30.0%
ATTAGACAAGTTTGTATGTG+TGG - chr8_3:59475597-59475616 Msa1298650:intron 30.0%
AATTATCAAGTTCATTCTCC+TGG + chr8_3:59475751-59475770 None:intergenic 30.0%
! TTTTTCTGCATATTTTGCAG+TGG - chr8_3:59475978-59475997 Msa1298650:CDS 30.0%
CATTACTTTGTTAATTAGGC+TGG - chr8_3:59476106-59476125 Msa1298650:CDS 30.0%
! GTATATTTTCAAAGTGGCAT+TGG - chr8_3:59476137-59476156 Msa1298650:CDS 30.0%
!! TTGAAAAGTACCAAGAAGTA+TGG - chr8_3:59476377-59476396 Msa1298650:CDS 30.0%
ATGCAACTATCATCATAAAC+TGG - chr8_3:59476406-59476425 Msa1298650:CDS 30.0%
TGCAACTATCATCATAAACT+GGG - chr8_3:59476407-59476426 Msa1298650:CDS 30.0%
GTTCTTCAGCCAAAAAAAAA+AGG + chr8_3:59476456-59476475 None:intergenic 30.0%
TGTAAATAAGGTTAGGGATA+TGG + chr8_3:59476589-59476608 None:intergenic 30.0%
GAACTGATTATTGTCAAAGT+AGG + chr8_3:59476666-59476685 None:intergenic 30.0%
GTGCAAATTTATTGATGTTG+GGG + chr8_3:59474762-59474781 None:intergenic 30.0%
GTGTGCAAATTTATTGATGT+TGG + chr8_3:59474764-59474783 None:intergenic 30.0%
TGTTGTTAGAACAACTTGAA+GGG + chr8_3:59474891-59474910 None:intergenic 30.0%
AACACATGTAGATCATATTG+TGG - chr8_3:59474907-59474926 Msa1298650:three_prime_UTR 30.0%
TGTGTCTTATGAAGCTATTA+AGG - chr8_3:59475389-59475408 Msa1298650:CDS 30.0%
GTGTCTTATGAAGCTATTAA+GGG - chr8_3:59475390-59475409 Msa1298650:CDS 30.0%
TGTCTTATGAAGCTATTAAG+GGG - chr8_3:59475391-59475410 Msa1298650:CDS 30.0%
TAAGTAAACTTGAGTGTGAA+GGG - chr8_3:59475421-59475440 Msa1298650:intron 30.0%
ATTAGACAAGTTTGTATGTG+TGG - chr8_3:59475597-59475616 Msa1298650:intron 30.0%
AATTATCAAGTTCATTCTCC+TGG + chr8_3:59475751-59475770 None:intergenic 30.0%
! TTTTTCTGCATATTTTGCAG+TGG - chr8_3:59475978-59475997 Msa1298650:CDS 30.0%
CATTACTTTGTTAATTAGGC+TGG - chr8_3:59476106-59476125 Msa1298650:CDS 30.0%
! GTATATTTTCAAAGTGGCAT+TGG - chr8_3:59476137-59476156 Msa1298650:CDS 30.0%
!! TTGAAAAGTACCAAGAAGTA+TGG - chr8_3:59476377-59476396 Msa1298650:CDS 30.0%
ATGCAACTATCATCATAAAC+TGG - chr8_3:59476406-59476425 Msa1298650:CDS 30.0%
TGCAACTATCATCATAAACT+GGG - chr8_3:59476407-59476426 Msa1298650:CDS 30.0%
GTTCTTCAGCCAAAAAAAAA+AGG + chr8_3:59476456-59476475 None:intergenic 30.0%
TGTAAATAAGGTTAGGGATA+TGG + chr8_3:59476589-59476608 None:intergenic 30.0%
GAACTGATTATTGTCAAAGT+AGG + chr8_3:59476666-59476685 None:intergenic 30.0%
!!! GTTGGGGATGATTTTTTAGT+TGG + chr8_3:59474746-59474765 None:intergenic 35.0%
! GTGTTGTTAGAACAACTTGA+AGG + chr8_3:59474892-59474911 None:intergenic 35.0%
TTATGCAGAAGAGTAAGTCA+CGG + chr8_3:59474990-59475009 None:intergenic 35.0%
ATCTATTTGTAGGACTCTGT+AGG + chr8_3:59475046-59475065 None:intergenic 35.0%
GGTATGCGTAATCTATTTGT+AGG + chr8_3:59475056-59475075 None:intergenic 35.0%
AATGAGCATGAAAACGTTGT+CGG + chr8_3:59475193-59475212 None:intergenic 35.0%
TGCATGGCAAATGTTTATCA+GGG + chr8_3:59475251-59475270 None:intergenic 35.0%
ATACCAGAAACATTTCTGCA+TGG + chr8_3:59475267-59475286 None:intergenic 35.0%
!! ATGCAGAAATGTTTCTGGTA+TGG - chr8_3:59475266-59475285 Msa1298650:intron 35.0%
!! TGCAGAAATGTTTCTGGTAT+GGG - chr8_3:59475267-59475286 Msa1298650:intron 35.0%
!! TATGATGGGCCATAAAAAGA+CGG - chr8_3:59475323-59475342 Msa1298650:intron 35.0%
CTAAGTAAACTTGAGTGTGA+AGG - chr8_3:59475420-59475439 Msa1298650:intron 35.0%
TTATAGTGTTGCACCTTTGA+AGG - chr8_3:59475455-59475474 Msa1298650:intron 35.0%
CTTGAACAGAATACCTAACA+CGG + chr8_3:59475512-59475531 None:intergenic 35.0%
GTGTTAGGTATTCTGTTCAA+GGG - chr8_3:59475511-59475530 Msa1298650:intron 35.0%
CTCTCGAAAAAAATCGTCTT+TGG - chr8_3:59475828-59475847 Msa1298650:CDS 35.0%
! GCAAACATTTTCAACCTCAT+AGG + chr8_3:59476030-59476049 None:intergenic 35.0%
ATGAGGTTGAAAATGTTTGC+AGG - chr8_3:59476030-59476049 Msa1298650:CDS 35.0%
!! TGTAACTTTTCTTTTTGGGC+AGG - chr8_3:59476312-59476331 Msa1298650:CDS 35.0%
! TGGTACTTTTCAAATCCAGT+TGG + chr8_3:59476370-59476389 None:intergenic 35.0%
!!! TGTTTTGATCTGTATTCCCT+AGG - chr8_3:59476511-59476530 Msa1298650:CDS 35.0%
!!! GTTGGGGATGATTTTTTAGT+TGG + chr8_3:59474746-59474765 None:intergenic 35.0%
! GTGTTGTTAGAACAACTTGA+AGG + chr8_3:59474892-59474911 None:intergenic 35.0%
TTATGCAGAAGAGTAAGTCA+CGG + chr8_3:59474990-59475009 None:intergenic 35.0%
ATCTATTTGTAGGACTCTGT+AGG + chr8_3:59475046-59475065 None:intergenic 35.0%
GGTATGCGTAATCTATTTGT+AGG + chr8_3:59475056-59475075 None:intergenic 35.0%
AATGAGCATGAAAACGTTGT+CGG + chr8_3:59475193-59475212 None:intergenic 35.0%
TGCATGGCAAATGTTTATCA+GGG + chr8_3:59475251-59475270 None:intergenic 35.0%
ATACCAGAAACATTTCTGCA+TGG + chr8_3:59475267-59475286 None:intergenic 35.0%
!! ATGCAGAAATGTTTCTGGTA+TGG - chr8_3:59475266-59475285 Msa1298650:intron 35.0%
!! TGCAGAAATGTTTCTGGTAT+GGG - chr8_3:59475267-59475286 Msa1298650:intron 35.0%
!! TATGATGGGCCATAAAAAGA+CGG - chr8_3:59475323-59475342 Msa1298650:intron 35.0%
CTAAGTAAACTTGAGTGTGA+AGG - chr8_3:59475420-59475439 Msa1298650:intron 35.0%
TTATAGTGTTGCACCTTTGA+AGG - chr8_3:59475455-59475474 Msa1298650:intron 35.0%
CTTGAACAGAATACCTAACA+CGG + chr8_3:59475512-59475531 None:intergenic 35.0%
GTGTTAGGTATTCTGTTCAA+GGG - chr8_3:59475511-59475530 Msa1298650:intron 35.0%
CTCTCGAAAAAAATCGTCTT+TGG - chr8_3:59475828-59475847 Msa1298650:CDS 35.0%
! GCAAACATTTTCAACCTCAT+AGG + chr8_3:59476030-59476049 None:intergenic 35.0%
ATGAGGTTGAAAATGTTTGC+AGG - chr8_3:59476030-59476049 Msa1298650:CDS 35.0%
!! TGTAACTTTTCTTTTTGGGC+AGG - chr8_3:59476312-59476331 Msa1298650:CDS 35.0%
! TGGTACTTTTCAAATCCAGT+TGG + chr8_3:59476370-59476389 None:intergenic 35.0%
!!! TGTTTTGATCTGTATTCCCT+AGG - chr8_3:59476511-59476530 Msa1298650:CDS 35.0%
!! ATGGAGGGTACTGAAGAATT+TGG + chr8_3:59474830-59474849 None:intergenic 40.0%
TACCCATTTGCCCTTCAAAA+CGG - chr8_3:59474946-59474965 Msa1298650:three_prime_UTR 40.0%
!!! ATCCGTTTTGAAGGGCAAAT+GGG + chr8_3:59474951-59474970 None:intergenic 40.0%
ATGAGCATGAAAACGTTGTC+GGG + chr8_3:59475192-59475211 None:intergenic 40.0%
CTGCATGGCAAATGTTTATC+AGG + chr8_3:59475252-59475271 None:intergenic 40.0%
TTGCCATGCAGAAATGTTTC+TGG - chr8_3:59475261-59475280 Msa1298650:intron 40.0%
AGTACTATGATTGTCCTGCT+TGG - chr8_3:59475298-59475317 Msa1298650:intron 40.0%
TTGTCCTGCTTGGAATATGA+TGG - chr8_3:59475308-59475327 Msa1298650:intron 40.0%
TGTCCTGCTTGGAATATGAT+GGG - chr8_3:59475309-59475328 Msa1298650:intron 40.0%
!! ATGATGGGCCATAAAAAGAC+GGG - chr8_3:59475324-59475343 Msa1298650:intron 40.0%
! AAGAAGAGCCCGTCTTTTTA+TGG + chr8_3:59475335-59475354 None:intergenic 40.0%
!!! TCTTCTTCGTTTTTTGGGTC+TGG - chr8_3:59475348-59475367 Msa1298650:intron 40.0%
CGTGTTAGGTATTCTGTTCA+AGG - chr8_3:59475510-59475529 Msa1298650:intron 40.0%
ACTTCAAATTGTGACTCAGC+AGG - chr8_3:59475633-59475652 Msa1298650:intron 40.0%
ATTCTCCTGGTTAAGACACA+CGG + chr8_3:59475738-59475757 None:intergenic 40.0%
!! TGCAGTGGCCTTATTATCAT+CGG - chr8_3:59475993-59476012 Msa1298650:CDS 40.0%
TCTTGCTCCCGATGATAATA+AGG + chr8_3:59476004-59476023 None:intergenic 40.0%
TATTATCATCGGGAGCAAGA+AGG - chr8_3:59476004-59476023 Msa1298650:CDS 40.0%
!! TTCTTTTTGGGCAGGACTTT+TGG - chr8_3:59476320-59476339 Msa1298650:CDS 40.0%
! TTTTGGCCTATATGCTAGCA+TGG - chr8_3:59476337-59476356 Msa1298650:CDS 40.0%
TGTCATCCATGCTAGCATAT+AGG + chr8_3:59476346-59476365 None:intergenic 40.0%
GCATACTATGCCATACTTCT+TGG + chr8_3:59476390-59476409 None:intergenic 40.0%
ATAAGGTTAGGGATATGGCT+AGG + chr8_3:59476584-59476603 None:intergenic 40.0%
!! ATGGAGGGTACTGAAGAATT+TGG + chr8_3:59474830-59474849 None:intergenic 40.0%
TACCCATTTGCCCTTCAAAA+CGG - chr8_3:59474946-59474965 Msa1298650:three_prime_UTR 40.0%
!!! ATCCGTTTTGAAGGGCAAAT+GGG + chr8_3:59474951-59474970 None:intergenic 40.0%
ATGAGCATGAAAACGTTGTC+GGG + chr8_3:59475192-59475211 None:intergenic 40.0%
CTGCATGGCAAATGTTTATC+AGG + chr8_3:59475252-59475271 None:intergenic 40.0%
TTGCCATGCAGAAATGTTTC+TGG - chr8_3:59475261-59475280 Msa1298650:intron 40.0%
AGTACTATGATTGTCCTGCT+TGG - chr8_3:59475298-59475317 Msa1298650:intron 40.0%
TTGTCCTGCTTGGAATATGA+TGG - chr8_3:59475308-59475327 Msa1298650:intron 40.0%
TGTCCTGCTTGGAATATGAT+GGG - chr8_3:59475309-59475328 Msa1298650:intron 40.0%
!! ATGATGGGCCATAAAAAGAC+GGG - chr8_3:59475324-59475343 Msa1298650:intron 40.0%
! AAGAAGAGCCCGTCTTTTTA+TGG + chr8_3:59475335-59475354 None:intergenic 40.0%
!!! TCTTCTTCGTTTTTTGGGTC+TGG - chr8_3:59475348-59475367 Msa1298650:intron 40.0%
CGTGTTAGGTATTCTGTTCA+AGG - chr8_3:59475510-59475529 Msa1298650:intron 40.0%
ACTTCAAATTGTGACTCAGC+AGG - chr8_3:59475633-59475652 Msa1298650:intron 40.0%
ATTCTCCTGGTTAAGACACA+CGG + chr8_3:59475738-59475757 None:intergenic 40.0%
!! TGCAGTGGCCTTATTATCAT+CGG - chr8_3:59475993-59476012 Msa1298650:CDS 40.0%
TCTTGCTCCCGATGATAATA+AGG + chr8_3:59476004-59476023 None:intergenic 40.0%
TATTATCATCGGGAGCAAGA+AGG - chr8_3:59476004-59476023 Msa1298650:CDS 40.0%
!! TTCTTTTTGGGCAGGACTTT+TGG - chr8_3:59476320-59476339 Msa1298650:CDS 40.0%
! TTTTGGCCTATATGCTAGCA+TGG - chr8_3:59476337-59476356 Msa1298650:CDS 40.0%
TGTCATCCATGCTAGCATAT+AGG + chr8_3:59476346-59476365 None:intergenic 40.0%
GCATACTATGCCATACTTCT+TGG + chr8_3:59476390-59476409 None:intergenic 40.0%
ATAAGGTTAGGGATATGGCT+AGG + chr8_3:59476584-59476603 None:intergenic 40.0%
!!! CATCCGTTTTGAAGGGCAAA+TGG + chr8_3:59474952-59474971 None:intergenic 45.0%
TTTGCCCTTCAAAACGGATG+TGG - chr8_3:59474952-59474971 Msa1298650:three_prime_UTR 45.0%
AGAGTAAGTCACGGAAACCT+GGG + chr8_3:59474981-59475000 None:intergenic 45.0%
AAGAGTAAGTCACGGAAACC+TGG + chr8_3:59474982-59475001 None:intergenic 45.0%
ACACTAGTCCTAGGAACCAA+AGG - chr8_3:59475117-59475136 Msa1298650:intron 45.0%
TGAAAACGTTGTCGGGTGTT+GGG + chr8_3:59475185-59475204 None:intergenic 45.0%
ATGAAAACGTTGTCGGGTGT+TGG + chr8_3:59475186-59475205 None:intergenic 45.0%
CCTTGAAACAAAGGTGAACG+AGG + chr8_3:59475225-59475244 None:intergenic 45.0%
! CCTCGTTCACCTTTGTTTCA+AGG - chr8_3:59475222-59475241 Msa1298650:intron 45.0%
TCAGGGAAGCCTTGAAACAA+AGG + chr8_3:59475234-59475253 None:intergenic 45.0%
!!! ACGGGCTCTTCTTCGTTTTT+TGG - chr8_3:59475342-59475361 Msa1298650:intron 45.0%
!!! CGGGCTCTTCTTCGTTTTTT+GGG - chr8_3:59475343-59475362 Msa1298650:intron 45.0%
TAAGACACAGCACAACACTC+AGG + chr8_3:59475378-59475397 None:intergenic 45.0%
! GTTGCACCTTTGAAGGTTGA+TGG - chr8_3:59475462-59475481 Msa1298650:intron 45.0%
CTAGGTCCATCAACCTTCAA+AGG + chr8_3:59475471-59475490 None:intergenic 45.0%
!! AGGTTGATGGACCTAGTGAT+TGG - chr8_3:59475475-59475494 Msa1298650:intron 45.0%
!! GGTTGATGGACCTAGTGATT+GGG - chr8_3:59475476-59475495 Msa1298650:intron 45.0%
GACCTAGTGATTGGGCTTAT+GGG - chr8_3:59475484-59475503 Msa1298650:intron 45.0%
ATCCCATAAGCCCAATCACT+AGG + chr8_3:59475489-59475508 None:intergenic 45.0%
! CAAGGGAGTGATGAGTTTTG+TGG - chr8_3:59475528-59475547 Msa1298650:intron 45.0%
!! TGAGTTTTGTGGTGCTTGTC+AGG - chr8_3:59475539-59475558 Msa1298650:intron 45.0%
!! AGTTGTGGGTATGGTTCTGA+TGG - chr8_3:59475573-59475592 Msa1298650:intron 45.0%
!! GTTGTGGGTATGGTTCTGAT+GGG - chr8_3:59475574-59475593 Msa1298650:intron 45.0%
ATTGTCCGTGTGTCTTAACC+AGG - chr8_3:59475730-59475749 Msa1298650:intron 45.0%
!! GCAGTGGCCTTATTATCATC+GGG - chr8_3:59475994-59476013 Msa1298650:CDS 45.0%
AATAGGACACACAAGCCACT+AGG + chr8_3:59476167-59476186 None:intergenic 45.0%
TAGCATGGATGACAACCAAC+TGG - chr8_3:59476352-59476371 Msa1298650:CDS 45.0%
!!! CATCCGTTTTGAAGGGCAAA+TGG + chr8_3:59474952-59474971 None:intergenic 45.0%
TTTGCCCTTCAAAACGGATG+TGG - chr8_3:59474952-59474971 Msa1298650:three_prime_UTR 45.0%
AGAGTAAGTCACGGAAACCT+GGG + chr8_3:59474981-59475000 None:intergenic 45.0%
AAGAGTAAGTCACGGAAACC+TGG + chr8_3:59474982-59475001 None:intergenic 45.0%
ACACTAGTCCTAGGAACCAA+AGG - chr8_3:59475117-59475136 Msa1298650:intron 45.0%
TGAAAACGTTGTCGGGTGTT+GGG + chr8_3:59475185-59475204 None:intergenic 45.0%
ATGAAAACGTTGTCGGGTGT+TGG + chr8_3:59475186-59475205 None:intergenic 45.0%
CCTTGAAACAAAGGTGAACG+AGG + chr8_3:59475225-59475244 None:intergenic 45.0%
! CCTCGTTCACCTTTGTTTCA+AGG - chr8_3:59475222-59475241 Msa1298650:intron 45.0%
TCAGGGAAGCCTTGAAACAA+AGG + chr8_3:59475234-59475253 None:intergenic 45.0%
!!! ACGGGCTCTTCTTCGTTTTT+TGG - chr8_3:59475342-59475361 Msa1298650:intron 45.0%
!!! CGGGCTCTTCTTCGTTTTTT+GGG - chr8_3:59475343-59475362 Msa1298650:intron 45.0%
TAAGACACAGCACAACACTC+AGG + chr8_3:59475378-59475397 None:intergenic 45.0%
! GTTGCACCTTTGAAGGTTGA+TGG - chr8_3:59475462-59475481 Msa1298650:intron 45.0%
CTAGGTCCATCAACCTTCAA+AGG + chr8_3:59475471-59475490 None:intergenic 45.0%
!! AGGTTGATGGACCTAGTGAT+TGG - chr8_3:59475475-59475494 Msa1298650:intron 45.0%
!! GGTTGATGGACCTAGTGATT+GGG - chr8_3:59475476-59475495 Msa1298650:intron 45.0%
GACCTAGTGATTGGGCTTAT+GGG - chr8_3:59475484-59475503 Msa1298650:intron 45.0%
ATCCCATAAGCCCAATCACT+AGG + chr8_3:59475489-59475508 None:intergenic 45.0%
! CAAGGGAGTGATGAGTTTTG+TGG - chr8_3:59475528-59475547 Msa1298650:intron 45.0%
!! TGAGTTTTGTGGTGCTTGTC+AGG - chr8_3:59475539-59475558 Msa1298650:intron 45.0%
!! AGTTGTGGGTATGGTTCTGA+TGG - chr8_3:59475573-59475592 Msa1298650:intron 45.0%
!! GTTGTGGGTATGGTTCTGAT+GGG - chr8_3:59475574-59475593 Msa1298650:intron 45.0%
ATTGTCCGTGTGTCTTAACC+AGG - chr8_3:59475730-59475749 Msa1298650:intron 45.0%
!! GCAGTGGCCTTATTATCATC+GGG - chr8_3:59475994-59476013 Msa1298650:CDS 45.0%
AATAGGACACACAAGCCACT+AGG + chr8_3:59476167-59476186 None:intergenic 45.0%
TAGCATGGATGACAACCAAC+TGG - chr8_3:59476352-59476371 Msa1298650:CDS 45.0%
!! GTGGCCACATCCGTTTTGAA+GGG + chr8_3:59474959-59474978 None:intergenic 50.0%
CTCATGTTCCACGTAACCTC+AGG - chr8_3:59475018-59475037 Msa1298650:exon 50.0%
TGTAGGAACCTGAGGTTACG+TGG + chr8_3:59475029-59475048 None:intergenic 50.0%
TAGGACTCTGTAGGAACCTG+AGG + chr8_3:59475037-59475056 None:intergenic 50.0%
GTATCGCACGTAGACATGTG+TGG + chr8_3:59475099-59475118 None:intergenic 50.0%
ACGTGCGATACACTAGTCCT+AGG - chr8_3:59475108-59475127 Msa1298650:intron 50.0%
GTCCTAGGAACCAAAGGCAA+CGG - chr8_3:59475123-59475142 Msa1298650:intron 50.0%
! AACCGTTGCCTTTGGTTCCT+AGG + chr8_3:59475128-59475147 None:intergenic 50.0%
TTCATGTATGGGGTTCGCCA+CGG + chr8_3:59475162-59475181 None:intergenic 50.0%
!! GGGTGTTGGGTTCATGTATG+GGG + chr8_3:59475172-59475191 None:intergenic 50.0%
!! CGGGTGTTGGGTTCATGTAT+GGG + chr8_3:59475173-59475192 None:intergenic 50.0%
!! TCGGGTGTTGGGTTCATGTA+TGG + chr8_3:59475174-59475193 None:intergenic 50.0%
TGGCCCATCATATTCCAAGC+AGG + chr8_3:59475315-59475334 None:intergenic 50.0%
ACACAGCACAACACTCAGGT+GGG + chr8_3:59475374-59475393 None:intergenic 50.0%
GGACCTAGTGATTGGGCTTA+TGG - chr8_3:59475483-59475502 Msa1298650:intron 50.0%
AGGCTACTGGTGGTAGTTGT+GGG - chr8_3:59475559-59475578 Msa1298650:intron 50.0%
ACTGGTGGTAGTTGTGGGTA+TGG - chr8_3:59475564-59475583 Msa1298650:intron 50.0%
!! AGTGGCATTGGTGATCCTAG+TGG - chr8_3:59476149-59476168 Msa1298650:CDS 50.0%
!! GTGGCCACATCCGTTTTGAA+GGG + chr8_3:59474959-59474978 None:intergenic 50.0%
CTCATGTTCCACGTAACCTC+AGG - chr8_3:59475018-59475037 Msa1298650:exon 50.0%
TGTAGGAACCTGAGGTTACG+TGG + chr8_3:59475029-59475048 None:intergenic 50.0%
TAGGACTCTGTAGGAACCTG+AGG + chr8_3:59475037-59475056 None:intergenic 50.0%
GTATCGCACGTAGACATGTG+TGG + chr8_3:59475099-59475118 None:intergenic 50.0%
ACGTGCGATACACTAGTCCT+AGG - chr8_3:59475108-59475127 Msa1298650:intron 50.0%
GTCCTAGGAACCAAAGGCAA+CGG - chr8_3:59475123-59475142 Msa1298650:intron 50.0%
! AACCGTTGCCTTTGGTTCCT+AGG + chr8_3:59475128-59475147 None:intergenic 50.0%
TTCATGTATGGGGTTCGCCA+CGG + chr8_3:59475162-59475181 None:intergenic 50.0%
!! GGGTGTTGGGTTCATGTATG+GGG + chr8_3:59475172-59475191 None:intergenic 50.0%
!! CGGGTGTTGGGTTCATGTAT+GGG + chr8_3:59475173-59475192 None:intergenic 50.0%
!! TCGGGTGTTGGGTTCATGTA+TGG + chr8_3:59475174-59475193 None:intergenic 50.0%
TGGCCCATCATATTCCAAGC+AGG + chr8_3:59475315-59475334 None:intergenic 50.0%
ACACAGCACAACACTCAGGT+GGG + chr8_3:59475374-59475393 None:intergenic 50.0%
GGACCTAGTGATTGGGCTTA+TGG - chr8_3:59475483-59475502 Msa1298650:intron 50.0%
AGGCTACTGGTGGTAGTTGT+GGG - chr8_3:59475559-59475578 Msa1298650:intron 50.0%
ACTGGTGGTAGTTGTGGGTA+TGG - chr8_3:59475564-59475583 Msa1298650:intron 50.0%
!! AGTGGCATTGGTGATCCTAG+TGG - chr8_3:59476149-59476168 Msa1298650:CDS 50.0%
! GGTGGCCACATCCGTTTTGA+AGG + chr8_3:59474960-59474979 None:intergenic 55.0%
GTAAGTCACGGAAACCTGGG+TGG + chr8_3:59474978-59474997 None:intergenic 55.0%
GCTCGTGAAGTGTGAGAGCT+TGG + chr8_3:59475077-59475096 None:intergenic 55.0%
GACGGAGAAACCGTTGCCTT+TGG + chr8_3:59475136-59475155 None:intergenic 55.0%
GACACAGCACAACACTCAGG+TGG + chr8_3:59475375-59475394 None:intergenic 55.0%
GGGCTTATGGGATCCGTGTT+AGG - chr8_3:59475496-59475515 Msa1298650:intron 55.0%
TGTGGTGCTTGTCAGGCTAC+TGG - chr8_3:59475546-59475565 Msa1298650:intron 55.0%
CAGGCTACTGGTGGTAGTTG+TGG - chr8_3:59475558-59475577 Msa1298650:intron 55.0%
! GGTGGCCACATCCGTTTTGA+AGG + chr8_3:59474960-59474979 None:intergenic 55.0%
GTAAGTCACGGAAACCTGGG+TGG + chr8_3:59474978-59474997 None:intergenic 55.0%
GCTCGTGAAGTGTGAGAGCT+TGG + chr8_3:59475077-59475096 None:intergenic 55.0%
GACGGAGAAACCGTTGCCTT+TGG + chr8_3:59475136-59475155 None:intergenic 55.0%
GACACAGCACAACACTCAGG+TGG + chr8_3:59475375-59475394 None:intergenic 55.0%
GGGCTTATGGGATCCGTGTT+AGG - chr8_3:59475496-59475515 Msa1298650:intron 55.0%
TGTGGTGCTTGTCAGGCTAC+TGG - chr8_3:59475546-59475565 Msa1298650:intron 55.0%
CAGGCTACTGGTGGTAGTTG+TGG - chr8_3:59475558-59475577 Msa1298650:intron 55.0%
CAAAACGGATGTGGCCACCC+AGG - chr8_3:59474961-59474980 Msa1298650:three_prime_UTR 60.0%
ACGGTTTCTCCGTCGAACCG+TGG - chr8_3:59475142-59475161 Msa1298650:intron 60.0%
GGTGCTTGTCAGGCTACTGG+TGG - chr8_3:59475549-59475568 Msa1298650:intron 60.0%
CGGGAGCAAGAAGGCCTATG+AGG - chr8_3:59476013-59476032 Msa1298650:CDS 60.0%
CAAAACGGATGTGGCCACCC+AGG - chr8_3:59474961-59474980 Msa1298650:three_prime_UTR 60.0%
ACGGTTTCTCCGTCGAACCG+TGG - chr8_3:59475142-59475161 Msa1298650:intron 60.0%
GGTGCTTGTCAGGCTACTGG+TGG - chr8_3:59475549-59475568 Msa1298650:intron 60.0%
CGGGAGCAAGAAGGCCTATG+AGG - chr8_3:59476013-59476032 Msa1298650:CDS 60.0%
TGGGGTTCGCCACGGTTCGA+CGG + chr8_3:59475154-59475173 None:intergenic 65.0%
TGGGGTTCGCCACGGTTCGA+CGG + chr8_3:59475154-59475173 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 59474727 59476688 59474727 ID=Msa1298650;Name=Msa1298650
chr8_3 mRNA 59474727 59476688 59474727 ID=Msa1298650-mRNA-1;Parent=Msa1298650;Name=Msa1298650-mRNA-1;_AED=0.00;_eAED=0.00;_QI=96|1|1|1|1|1|3|308|310
chr8_3 exon 59474727 59475081 59474727 ID=Msa1298650-mRNA-1:exon:17148;Parent=Msa1298650-mRNA-1
chr8_3 exon 59475364 59475417 59475364 ID=Msa1298650-mRNA-1:exon:17147;Parent=Msa1298650-mRNA-1
chr8_3 exon 59475761 59476688 59475761 ID=Msa1298650-mRNA-1:exon:17146;Parent=Msa1298650-mRNA-1
chr8_3 five_prime_UTR 59476593 59476688 59476593 ID=Msa1298650-mRNA-1:five_prime_utr;Parent=Msa1298650-mRNA-1
chr8_3 CDS 59475761 59476592 59475761 ID=Msa1298650-mRNA-1:cds;Parent=Msa1298650-mRNA-1
chr8_3 CDS 59475364 59475417 59475364 ID=Msa1298650-mRNA-1:cds;Parent=Msa1298650-mRNA-1
chr8_3 CDS 59475035 59475081 59475035 ID=Msa1298650-mRNA-1:cds;Parent=Msa1298650-mRNA-1
chr8_3 three_prime_UTR 59474727 59475034 59474727 ID=Msa1298650-mRNA-1:three_prime_utr;Parent=Msa1298650-mRNA-1
Gene Sequence

>Msa1298650

ATGTCCAAATTCTTCAGTACCCTCCATCATCTAATCATTATATTATCAATAACATATCTAATCATCCCTTCAAGTTGTTCTAACAACACATGTAGATCATATTGTGGAAACATCACAATAGATTACCCATTTGCCCTTCAAAACGGATGTGGCCACCCAGGTTTCCGTGACTTACTCTTCTGCATAAACAACGTTCTCATGTTCCACGTAACCTCAGGTTCCTACAGAGTCCTACAAATAGATTACGCATACCAAGCTCTCACACTTCACGAGCCACACATGTCTACGTGCGATACACTAGTCCTAGGAACCAAAGGCAACGGTTTCTCCGTCGAACCGTGGCGAACCCCATACATGAACCCAACACCCGACAACGTTTTCATGCTCATTTCTTGTTCACCTCGTTCACCTTTGTTTCAAGGCTTCCCTGATAAACATTTGCCATGCAGAAATGTTTCTGGTATGGGATGTGAAGAGTACTATGATTGTCCTGCTTGGAATATGATGGGCCATAAAAAGACGGGCTCTTCTTCGTTTTTTGGGTCTGGCCCACCTGAGTGTTGTGCTGTGTCTTATGAAGCTATTAAGGGGATTAATCTAAGTAAACTTGAGTGTGAAGGGTATAGTAGTGCTTATAGTGTTGCACCTTTGAAGGTTGATGGACCTAGTGATTGGGCTTATGGGATCCGTGTTAGGTATTCTGTTCAAGGGAGTGATGAGTTTTGTGGTGCTTGTCAGGCTACTGGTGGTAGTTGTGGGTATGGTTCTGATGGGATTAGACAAGTTTGTATGTGTGGAAACTTTAATTCAACTTCAAATTGTGACTCAGCAGTGGCCTTATTATCATCGGGAGCAAGAAGGCCTATGAGGTTGAAAATGTTTGCAGGACTTTTGGCCTATATGCTAGCATGGATGACAACCAACTGGATTTGA
Protein sequence

>Msa1298650

MSKFFSTLHHLIIILSITYLIIPSSCSNNTCRSYCGNITIDYPFALQNGCGHPGFRDLLFCINNVLMFHVTSGSYRVLQIDYAYQALTLHEPHMSTCDTLVLGTKGNGFSVEPWRTPYMNPTPDNVFMLISCSPRSPLFQGFPDKHLPCRNVSGMGCEEYYDCPAWNMMGHKKTGSSSFFGSGPPECCAVSYEAIKGINLSKLECEGYSSAYSVAPLKVDGPSDWAYGIRVRYSVQGSDEFCGACQATGGSCGYGSDGIRQVCMCGNFNSTSNCDSAVALLSSGARRPMRLKMFAGLLAYMLAWMTTNWI*