Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0071850 | XP_003590780.1 | 85.253 | 495 | 71 | 2 | 1 | 494 | 1 | 494 | 0.0 | 855 |
| Msa0071850 | XP_003590780.1 | 88.660 | 97 | 11 | 0 | 494 | 590 | 579 | 675 | 1.17e-50 | 197 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0071850 | sp|Q9SS87|SEOB_ARATH | 26.400 | 500 | 319 | 18 | 36 | 492 | 39 | 532 | 1.98e-35 | 145 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0071850 | E2FKJ1 | 85.253 | 495 | 71 | 2 | 1 | 494 | 1 | 494 | 0.0 | 855 |
| Msa0071850 | E2FKJ1 | 88.660 | 97 | 11 | 0 | 494 | 590 | 579 | 675 | 5.57e-51 | 197 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002580 | Msa0071850 | 0.807233 | 5.585371e-50 | -8.615850e-47 |
| Msa0003080 | Msa0071850 | 0.809104 | 2.231241e-50 | -8.615850e-47 |
| Msa0005890 | Msa0071850 | 0.812637 | 3.836009e-51 | -8.615850e-47 |
| Msa0015150 | Msa0071850 | 0.934571 | 3.284139e-96 | -8.615850e-47 |
| Msa0018160 | Msa0071850 | 0.807654 | 4.548254e-50 | -8.615850e-47 |
| Msa0025160 | Msa0071850 | 0.835393 | 1.722084e-56 | -8.615850e-47 |
| Msa0025580 | Msa0071850 | 0.825874 | 3.693575e-54 | -8.615850e-47 |
| Msa0029960 | Msa0071850 | 0.909800 | 3.815315e-82 | -8.615850e-47 |
| Msa0029970 | Msa0071850 | 0.948701 | 5.594290e-107 | -8.615850e-47 |
| Msa0029990 | Msa0071850 | 0.839276 | 1.746026e-57 | -8.615850e-47 |
| Msa0034210 | Msa0071850 | 0.836908 | 7.100813e-57 | -8.615850e-47 |
| Msa0036870 | Msa0071850 | 0.800457 | 1.428422e-48 | -8.615850e-47 |
| Msa0050660 | Msa0071850 | 0.846116 | 2.657409e-59 | -8.615850e-47 |
| Msa0050700 | Msa0071850 | 0.845798 | 3.244216e-59 | -8.615850e-47 |
| Msa0050790 | Msa0071850 | 0.841119 | 5.765213e-58 | -8.615850e-47 |
| Msa0054690 | Msa0071850 | 0.819754 | 9.835777e-53 | -8.615850e-47 |
| Msa0061350 | Msa0071850 | 0.906720 | 1.096798e-80 | -8.615850e-47 |
| Msa0064120 | Msa0071850 | 0.919789 | 2.899792e-87 | -8.615850e-47 |
| Msa0071840 | Msa0071850 | 0.840397 | 8.913293e-58 | -8.615850e-47 |
| Msa0071850 | Msa0071860 | 0.992199 | 7.088310e-192 | -8.615850e-47 |
| Msa0071850 | Msa0071880 | 0.894768 | 1.806816e-75 | -8.615850e-47 |
| Msa0071850 | Msa0072520 | 0.828913 | 6.902313e-55 | -8.615850e-47 |
| Msa0071850 | Msa0073120 | 0.827823 | 1.264618e-54 | -8.615850e-47 |
| Msa0071850 | Msa0094780 | 0.805480 | 1.308248e-49 | -8.615850e-47 |
| Msa0071850 | Msa0108880 | 0.922164 | 1.403197e-88 | -8.615850e-47 |
| Msa0071850 | Msa0121330 | 0.830449 | 2.919107e-55 | -8.615850e-47 |
| Msa0071850 | Msa0125200 | 0.901599 | 2.276491e-78 | -8.615850e-47 |
| Msa0071850 | Msa0125210 | 0.939034 | 2.502302e-99 | -8.615850e-47 |
| Msa0071850 | Msa0128310 | 0.846242 | 2.456939e-59 | -8.615850e-47 |
| Msa0071850 | Msa0136650 | 0.800095 | 1.692229e-48 | -8.615850e-47 |
| Msa0071850 | Msa0143670 | 0.800586 | 1.344789e-48 | -8.615850e-47 |
| Msa0071850 | Msa0146650 | 0.820366 | 7.125197e-53 | -8.615850e-47 |
| Msa0071850 | Msa0150580 | 0.808267 | 3.367928e-50 | -8.615850e-47 |
| Msa0071850 | Msa0155180 | 0.896873 | 2.428569e-76 | -8.615850e-47 |
| Msa0071850 | Msa0161930 | 0.837895 | 3.967163e-57 | -8.615850e-47 |
| Msa0071850 | Msa0164400 | 0.814979 | 1.169349e-51 | -8.615850e-47 |
| Msa0071850 | Msa0174440 | 0.837493 | 5.032124e-57 | -8.615850e-47 |
| Msa0071850 | Msa0174450 | 0.814626 | 1.399573e-51 | -8.615850e-47 |
| Msa0071850 | Msa0188610 | 0.833068 | 6.595575e-56 | -8.615850e-47 |
| Msa0071850 | Msa0190570 | 0.810423 | 1.161052e-50 | -8.615850e-47 |
| Msa0071850 | Msa0193850 | 0.827932 | 1.190734e-54 | -8.615850e-47 |
| Msa0071850 | Msa0194820 | 0.815506 | 8.928506e-52 | -8.615850e-47 |
| Msa0071850 | Msa0194840 | 0.811868 | 5.644464e-51 | -8.615850e-47 |
| Msa0071850 | Msa0200050 | 0.801804 | 7.573718e-49 | -8.615850e-47 |
| Msa0071850 | Msa0213030 | 0.821020 | 5.041384e-53 | -8.615850e-47 |
| Msa0071850 | Msa0225860 | 0.809144 | 2.188151e-50 | -8.615850e-47 |
| Msa0071850 | Msa0230800 | 0.853830 | 1.843525e-61 | -8.615850e-47 |
| Msa0071850 | Msa0230870 | 0.867538 | 1.271078e-65 | -8.615850e-47 |
| Msa0071850 | Msa0235710 | 0.810786 | 9.694746e-51 | -8.615850e-47 |
| Msa0071850 | Msa0242590 | 0.801472 | 8.862731e-49 | -8.615850e-47 |
| Msa0071850 | Msa0260510 | 0.804309 | 2.297840e-49 | -8.615850e-47 |
| Msa0071850 | Msa0270340 | 0.817283 | 3.574037e-52 | -8.615850e-47 |
| Msa0071850 | Msa0298470 | 0.813628 | 2.324461e-51 | -8.615850e-47 |
| Msa0071850 | Msa0314170 | 0.834403 | 3.058077e-56 | -8.615850e-47 |
| Msa0071850 | Msa0359020 | 0.807002 | 6.252221e-50 | -8.615850e-47 |
| Msa0071850 | Msa0370810 | 0.822136 | 2.783408e-53 | -8.615850e-47 |
| Msa0071850 | Msa0380620 | 0.804734 | 1.874154e-49 | -8.615850e-47 |
| Msa0071850 | Msa0385220 | 0.801143 | 1.034891e-48 | -8.615850e-47 |
| Msa0071850 | Msa0405680 | 0.853910 | 1.748277e-61 | -8.615850e-47 |
| Msa0071850 | Msa0415610 | 0.822232 | 2.645035e-53 | -8.615850e-47 |
| Msa0071850 | Msa0418970 | 0.896775 | 2.667593e-76 | -8.615850e-47 |
| Msa0071850 | Msa0430300 | 0.801692 | 7.987313e-49 | -8.615850e-47 |
| Msa0071850 | Msa0432320 | 0.802553 | 5.311924e-49 | -8.615850e-47 |
| Msa0071850 | Msa0435210 | 0.806954 | 6.400646e-50 | -8.615850e-47 |
| Msa0071850 | Msa0435550 | 0.804596 | 2.002444e-49 | -8.615850e-47 |
| Msa0071850 | Msa0436910 | 0.812199 | 4.779810e-51 | -8.615850e-47 |
| Msa0071850 | Msa0460550 | 0.906040 | 2.268501e-80 | -8.615850e-47 |
| Msa0071850 | Msa0460630 | 0.828805 | 7.328619e-55 | -8.615850e-47 |
| Msa0071850 | Msa0465400 | 0.809253 | 2.072971e-50 | -8.615850e-47 |
| Msa0071850 | Msa0471460 | 0.822234 | 2.641253e-53 | -8.615850e-47 |
| Msa0071850 | Msa0471540 | 0.805573 | 1.250805e-49 | -8.615850e-47 |
| Msa0071850 | Msa0472950 | 0.804455 | 2.142412e-49 | -8.615850e-47 |
| Msa0071850 | Msa0479320 | 0.808548 | 2.934247e-50 | -8.615850e-47 |
| Msa0071850 | Msa0481890 | 0.806322 | 8.703187e-50 | -8.615850e-47 |
| Msa0071850 | Msa0482080 | 0.809423 | 1.905881e-50 | -8.615850e-47 |
| Msa0071850 | Msa0510480 | 0.833125 | 6.383383e-56 | -8.615850e-47 |
| Msa0071850 | Msa0517250 | 0.820681 | 6.031830e-53 | -8.615850e-47 |
| Msa0071850 | Msa0526010 | 0.829445 | 5.126732e-55 | -8.615850e-47 |
| Msa0071850 | Msa0528570 | 0.868928 | 4.534017e-66 | -8.615850e-47 |
| Msa0071850 | Msa0529030 | 0.806805 | 6.882239e-50 | -8.615850e-47 |
| Msa0071850 | Msa0531960 | 0.827626 | 1.410065e-54 | -8.615850e-47 |
| Msa0071850 | Msa0541300 | 0.846398 | 2.227468e-59 | -8.615850e-47 |
| Msa0071850 | Msa0541310 | 0.843575 | 1.287730e-58 | -8.615850e-47 |
| Msa0071850 | Msa0543660 | 0.833603 | 4.850351e-56 | -8.615850e-47 |
| Msa0071850 | Msa0546800 | 0.806762 | 7.028856e-50 | -8.615850e-47 |
| Msa0071850 | Msa0557460 | 0.827496 | 1.515511e-54 | -8.615850e-47 |
| Msa0071850 | Msa0562620 | 0.816048 | 6.760874e-52 | -8.615850e-47 |
| Msa0071850 | Msa0567170 | 0.816758 | 4.688587e-52 | -8.615850e-47 |
| Msa0071850 | Msa0580810 | 0.805185 | 1.508271e-49 | -8.615850e-47 |
| Msa0071850 | Msa0584420 | 0.852623 | 4.087653e-61 | -8.615850e-47 |
| Msa0071850 | Msa0585020 | 0.845788 | 3.264031e-59 | -8.615850e-47 |
| Msa0071850 | Msa0588920 | 0.852807 | 3.622210e-61 | -8.615850e-47 |
| Msa0071850 | Msa0597270 | 0.851805 | 6.987012e-61 | -8.615850e-47 |
| Msa0071850 | Msa0609300 | 0.835724 | 1.420640e-56 | -8.615850e-47 |
| Msa0071850 | Msa0616210 | 0.839126 | 1.909469e-57 | -8.615850e-47 |
| Msa0071850 | Msa0616510 | 0.815255 | 1.015180e-51 | -8.615850e-47 |
| Msa0071850 | Msa0621710 | 0.826053 | 3.350658e-54 | -8.615850e-47 |
| Msa0071850 | Msa0622110 | 0.828209 | 1.021151e-54 | -8.615850e-47 |
| Msa0071850 | Msa0640200 | 0.851001 | 1.178992e-60 | -8.615850e-47 |
| Msa0071850 | Msa0655700 | 0.801855 | 7.394916e-49 | -8.615850e-47 |
| Msa0071850 | Msa0657440 | 0.808456 | 3.070307e-50 | -8.615850e-47 |
| Msa0071850 | Msa0658640 | 0.807424 | 5.090173e-50 | -8.615850e-47 |
| Msa0071850 | Msa0661150 | 0.830624 | 2.644372e-55 | -8.615850e-47 |
| Msa0071850 | Msa0666700 | 0.842518 | 2.462689e-58 | -8.615850e-47 |
| Msa0071850 | Msa0675330 | 0.850081 | 2.138210e-60 | -8.615850e-47 |
| Msa0071850 | Msa0678490 | 0.838359 | 3.014131e-57 | -8.615850e-47 |
| Msa0071850 | Msa0691910 | 0.840389 | 8.957958e-58 | -8.615850e-47 |
| Msa0071850 | Msa0699540 | 0.840604 | 7.868904e-58 | -8.615850e-47 |
| Msa0071850 | Msa0699840 | 0.838053 | 3.614221e-57 | -8.615850e-47 |
| Msa0071850 | Msa0700460 | 0.820331 | 7.257814e-53 | -8.615850e-47 |
| Msa0071850 | Msa0701720 | 0.818386 | 2.013965e-52 | -8.615850e-47 |
| Msa0071850 | Msa0703600 | 0.806611 | 7.560943e-50 | -8.615850e-47 |
| Msa0071850 | Msa0709200 | 0.806349 | 8.588240e-50 | -8.615850e-47 |
| Msa0071850 | Msa0709440 | 0.807269 | 5.490210e-50 | -8.615850e-47 |
| Msa0071850 | Msa0713960 | 0.814938 | 1.194034e-51 | -8.615850e-47 |
| Msa0071850 | Msa0725750 | 0.826716 | 2.328193e-54 | -8.615850e-47 |
| Msa0071850 | Msa0735780 | 0.810017 | 1.420968e-50 | -8.615850e-47 |
| Msa0071850 | Msa0738700 | 0.874781 | 5.162555e-68 | -8.615850e-47 |
| Msa0071850 | Msa0740090 | 0.814729 | 1.327981e-51 | -8.615850e-47 |
| Msa0071850 | Msa0741220 | 0.802078 | 6.652867e-49 | -8.615850e-47 |
| Msa0071850 | Msa0743440 | 0.818625 | 1.777463e-52 | -8.615850e-47 |
| Msa0071850 | Msa0759010 | 0.801852 | 7.403587e-49 | -8.615850e-47 |
| Msa0071850 | Msa0761670 | 0.813361 | 2.660627e-51 | -8.615850e-47 |
| Msa0071850 | Msa0773630 | 0.803703 | 3.071915e-49 | -8.615850e-47 |
| Msa0071850 | Msa0780910 | 0.806004 | 1.015282e-49 | -8.615850e-47 |
| Msa0071850 | Msa0782750 | 0.845949 | 2.951400e-59 | -8.615850e-47 |
| Msa0071850 | Msa0783530 | 0.802494 | 5.463233e-49 | -8.615850e-47 |
| Msa0071850 | Msa0800200 | 0.804404 | 2.195451e-49 | -8.615850e-47 |
| Msa0071850 | Msa0819170 | 0.824025 | 1.009212e-53 | -8.615850e-47 |
| Msa0071850 | Msa0820380 | 0.828875 | 7.050227e-55 | -8.615850e-47 |
| Msa0071850 | Msa0824450 | 0.810811 | 9.574323e-51 | -8.615850e-47 |
| Msa0071850 | Msa0829300 | 0.818845 | 1.584543e-52 | -8.615850e-47 |
| Msa0071850 | Msa0829330 | 0.813250 | 2.814268e-51 | -8.615850e-47 |
| Msa0071850 | Msa0835350 | 0.818821 | 1.604983e-52 | -8.615850e-47 |
| Msa0071850 | Msa0859290 | 0.863816 | 1.899822e-64 | -8.615850e-47 |
| Msa0071850 | Msa0864940 | 0.800799 | 1.216376e-48 | -8.615850e-47 |
| Msa0071850 | Msa0894790 | 0.812777 | 3.574648e-51 | -8.615850e-47 |
| Msa0071850 | Msa0905240 | 0.808419 | 3.125659e-50 | -8.615850e-47 |
| Msa0071850 | Msa0921590 | 0.803475 | 3.425142e-49 | -8.615850e-47 |
| Msa0071850 | Msa0931590 | 0.828899 | 6.953525e-55 | -8.615850e-47 |
| Msa0071850 | Msa0974520 | 0.808028 | 3.787613e-50 | -8.615850e-47 |
| Msa0071850 | Msa1009950 | 0.801292 | 9.644904e-49 | -8.615850e-47 |
| Msa0071850 | Msa1014320 | 0.855935 | 4.517093e-62 | -8.615850e-47 |
| Msa0071850 | Msa1029800 | 0.810905 | 9.133329e-51 | -8.615850e-47 |
| Msa0071850 | Msa1042160 | 0.877651 | 5.294990e-69 | -8.615850e-47 |
| Msa0071850 | Msa1042190 | 0.882988 | 6.558747e-71 | -8.615850e-47 |
| Msa0071850 | Msa1055310 | 0.848449 | 6.087782e-60 | -8.615850e-47 |
| Msa0071850 | Msa1059020 | 0.801600 | 8.342096e-49 | -8.615850e-47 |
| Msa0071850 | Msa1068920 | 0.807672 | 4.508042e-50 | -8.615850e-47 |
| Msa0071850 | Msa1078820 | 0.826931 | 2.068931e-54 | -8.615850e-47 |
| Msa0071850 | Msa1078880 | 0.816848 | 4.476296e-52 | -8.615850e-47 |
| Msa0071850 | Msa1078970 | 0.806481 | 8.055032e-50 | -8.615850e-47 |
| Msa0071850 | Msa1080000 | 0.824328 | 8.566546e-54 | -8.615850e-47 |
| Msa0071850 | Msa1081690 | 0.825276 | 5.120673e-54 | -8.615850e-47 |
| Msa0071850 | Msa1082200 | 0.800306 | 1.533381e-48 | -8.615850e-47 |
| Msa0071850 | Msa1084530 | 0.806549 | 7.795509e-50 | -8.615850e-47 |
| Msa0071850 | Msa1123970 | 0.827467 | 1.539968e-54 | -8.615850e-47 |
| Msa0071850 | Msa1125820 | 0.816591 | 5.111067e-52 | -8.615850e-47 |
| Msa0071850 | Msa1125990 | 0.815049 | 1.128293e-51 | -8.615850e-47 |
| Msa0071850 | Msa1132530 | 0.821237 | 4.493435e-53 | -8.615850e-47 |
| Msa0071850 | Msa1167470 | 0.875933 | 2.083608e-68 | -8.615850e-47 |
| Msa0071850 | Msa1169190 | 0.814323 | 1.633661e-51 | -8.615850e-47 |
| Msa0071850 | Msa1169650 | 0.820221 | 7.689864e-53 | -8.615850e-47 |
| Msa0071850 | Msa1171290 | 0.802533 | 5.363347e-49 | -8.615850e-47 |
| Msa0071850 | Msa1187760 | 0.855735 | 5.168252e-62 | -8.615850e-47 |
| Msa0071850 | Msa1192570 | 0.812345 | 4.441490e-51 | -8.615850e-47 |
| Msa0071850 | Msa1208950 | 0.817364 | 3.426999e-52 | -8.615850e-47 |
| Msa0071850 | Msa1209320 | 0.822357 | 2.474281e-53 | -8.615850e-47 |
| Msa0071850 | Msa1209720 | 0.809295 | 2.030191e-50 | -8.615850e-47 |
| Msa0071850 | Msa1211640 | 0.813527 | 2.446621e-51 | -8.615850e-47 |
| Msa0071850 | Msa1215870 | 0.811413 | 7.089844e-51 | -8.615850e-47 |
| Msa0071850 | Msa1216110 | 0.806931 | 6.470936e-50 | -8.615850e-47 |
| Msa0071850 | Msa1226520 | 0.808995 | 2.354611e-50 | -8.615850e-47 |
| Msa0071850 | Msa1263780 | 0.813801 | 2.129763e-51 | -8.615850e-47 |
| Msa0071850 | Msa1265650 | 0.804339 | 2.265420e-49 | -8.615850e-47 |
| Msa0071850 | Msa1268630 | 0.840277 | 9.578637e-58 | -8.615850e-47 |
| Msa0071850 | Msa1284120 | 0.811846 | 5.707165e-51 | -8.615850e-47 |
| Msa0071850 | Msa1298650 | 0.805028 | 1.626819e-49 | -8.615850e-47 |
| Msa0071850 | Msa1303650 | 0.804022 | 2.637082e-49 | -8.615850e-47 |
| Msa0071850 | Msa1304950 | 0.825173 | 5.415370e-54 | -8.615850e-47 |
| Msa0071850 | Msa1315130 | 0.807613 | 4.640502e-50 | -8.615850e-47 |
| Msa0071850 | Msa1315160 | 0.827855 | 1.242518e-54 | -8.615850e-47 |
| Msa0071850 | Msa1341890 | 0.818569 | 1.830592e-52 | -8.615850e-47 |
| Msa0071850 | Msa1343180 | 0.815134 | 1.079920e-51 | -8.615850e-47 |
| Msa0071850 | Msa1359690 | 0.815907 | 7.267368e-52 | -8.615850e-47 |
| Msa0071850 | Msa1367840 | 0.818453 | 1.944506e-52 | -8.615850e-47 |
| Msa0071850 | Msa1380120 | 0.858949 | 5.795474e-63 | -8.615850e-47 |
| Msa0071850 | Msa1384460 | 0.811249 | 7.692665e-51 | -8.615850e-47 |
| Msa0071850 | Msa1393780 | 0.816538 | 5.252145e-52 | -8.615850e-47 |
| Msa0071850 | Msa1400010 | 0.830636 | 2.627439e-55 | -8.615850e-47 |
| Msa0071850 | Msa1409410 | 0.836283 | 1.024444e-56 | -8.615850e-47 |
| Msa0071850 | Msa1415540 | 0.870209 | 1.734104e-66 | -8.615850e-47 |
| Msa0071850 | Msa1420950 | 0.811355 | 7.298937e-51 | -8.615850e-47 |
| Msa0071850 | Msa1424910 | 0.800703 | 1.272804e-48 | -8.615850e-47 |
| Msa0071850 | Msa1433790 | 0.837775 | 4.259010e-57 | -8.615850e-47 |
| Msa0071850 | Msa1437930 | 0.811362 | 7.270747e-51 | -8.615850e-47 |
| Msa0071850 | Msa1440630 | 0.841615 | 4.267725e-58 | -8.615850e-47 |
| Msa0071850 | Msa1452140 | 0.837526 | 4.935753e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0071850 | MtrunA17_Chr1g0186991 | 85.253 | 495 | 71 | 2 | 1 | 494 | 1 | 494 | 0.0 | 855 |
| Msa0071850 | MtrunA17_Chr1g0186991 | 88.660 | 97 | 11 | 0 | 494 | 590 | 579 | 675 | 1.07e-54 | 197 |
| Msa0071850 | MtrunA17_Chr1g0186981 | 53.753 | 493 | 213 | 7 | 5 | 494 | 6 | 486 | 1.03e-166 | 490 |
| Msa0071850 | MtrunA17_Chr1g0186981 | 55.882 | 102 | 40 | 1 | 494 | 590 | 570 | 671 | 1.67e-33 | 135 |
| Msa0071850 | MtrunA17_Chr1g0187001 | 49.362 | 470 | 219 | 10 | 27 | 494 | 7 | 459 | 2.36e-142 | 427 |
| Msa0071850 | MtrunA17_Chr1g0187001 | 61.856 | 97 | 31 | 1 | 494 | 584 | 542 | 638 | 2.92e-33 | 135 |
| Msa0071850 | MtrunA17_Chr1g0165791 | 42.656 | 497 | 259 | 10 | 19 | 494 | 13 | 504 | 1.05e-111 | 349 |
| Msa0071850 | MtrunA17_Chr1g0165791 | 49.451 | 91 | 43 | 1 | 494 | 581 | 587 | 677 | 1.99e-20 | 95.5 |
| Msa0071850 | MtrunA17_Chr1g0186851 | 31.707 | 492 | 287 | 11 | 31 | 492 | 20 | 492 | 2.10e-68 | 234 |
| Msa0071850 | MtrunA17_Chr1g0186841 | 32.587 | 491 | 285 | 13 | 31 | 492 | 21 | 494 | 2.07e-63 | 221 |
| Msa0071850 | MtrunA17_Chr1g0186841 | 42.222 | 90 | 46 | 4 | 494 | 581 | 577 | 662 | 2.96e-11 | 66.2 |
| Msa0071850 | MtrunA17_Chr1g0186861 | 29.293 | 495 | 297 | 12 | 31 | 492 | 20 | 494 | 9.42e-61 | 213 |
| Msa0071850 | MtrunA17_Chr1g0187041 | 30.204 | 490 | 297 | 13 | 31 | 492 | 20 | 492 | 6.87e-56 | 200 |
| Msa0071850 | MtrunA17_Chr1g0186911 | 30.348 | 402 | 244 | 9 | 109 | 492 | 9 | 392 | 3.36e-50 | 182 |
| Msa0071850 | MtrunA17_Chr7g0226571 | 26.602 | 515 | 315 | 14 | 29 | 494 | 20 | 520 | 1.84e-36 | 145 |
| Msa0071850 | MtrunA17_Chr3g0116601 | 28.685 | 502 | 298 | 19 | 36 | 492 | 29 | 515 | 3.95e-36 | 144 |
| Msa0071850 | MtrunA17_Chr8g0381301 | 25.440 | 511 | 309 | 19 | 36 | 492 | 21 | 513 | 2.34e-32 | 132 |
| Msa0071850 | MtrunA17_Chr8g0364451 | 48.387 | 93 | 47 | 1 | 101 | 192 | 49 | 141 | 2.80e-17 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0071850 | AT3G01680.1 | 26.400 | 500 | 319 | 18 | 36 | 492 | 39 | 532 | 2.01e-36 | 145 |
| Msa0071850 | AT3G01670.2 | 23.211 | 517 | 303 | 12 | 36 | 492 | 162 | 644 | 7.92e-29 | 122 |
| Msa0071850 | AT3G01670.1 | 23.211 | 517 | 303 | 12 | 36 | 492 | 138 | 620 | 8.02e-29 | 122 |
| Msa0071850 | AT1G67790.1 | 20.945 | 487 | 337 | 16 | 40 | 492 | 15 | 487 | 2.75e-13 | 73.2 |
Find 114 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAACTTGTCACATTCTTAT+TGG | 0.141753 | 1_2:-44155284 | Msa0071850:CDS |
| CTTGGGAGGTACCATTCTTT+TGG | 0.182584 | 1_2:+44156101 | None:intergenic |
| ATCAATATCGTCAAGCTTAA+AGG | 0.190937 | 1_2:+44156054 | None:intergenic |
| AATCAAATGCAGCAACTATT+TGG | 0.224197 | 1_2:+44151081 | None:intergenic |
| GGATTCCCATTGTGGATAAT+TGG | 0.226633 | 1_2:-44153223 | Msa0071850:CDS |
| GTGCAATTACGTATCTTAAT+AGG | 0.248309 | 1_2:-44155387 | Msa0071850:CDS |
| TCAAGAAATGGGAATGGTTT+TGG | 0.249117 | 1_2:-44152680 | Msa0071850:CDS |
| GCCATTGATTGGTACATCTT+TGG | 0.251729 | 1_2:+44156132 | None:intergenic |
| GAAAGTTGCAAAGTGGAAAT+TGG | 0.271554 | 1_2:-44154934 | Msa0071850:intron |
| TCTGCCTCAACTCAGATTTC+TGG | 0.271962 | 1_2:-44155944 | Msa0071850:CDS |
| AACTCTAGCTGCATTCTCTT+TGG | 0.285355 | 1_2:-44155416 | Msa0071850:CDS |
| CAAATACCACCAATATTTAT+AGG | 0.291356 | 1_2:-44154706 | Msa0071850:CDS |
| GCTGCATTCTCTTTGGAGTA+TGG | 0.291746 | 1_2:-44155409 | Msa0071850:CDS |
| TCAGCATCACTTATCCTAAA+AGG | 0.301931 | 1_2:+44152711 | None:intergenic |
| GGAGCTGAGATTTCTGTTCT+TGG | 0.330206 | 1_2:+44156083 | None:intergenic |
| CTGAAGATATCTTCAAGAAA+TGG | 0.331332 | 1_2:-44152692 | Msa0071850:CDS |
| AAACCACAAGAAGTGATAAA+AGG | 0.343304 | 1_2:-44153275 | Msa0071850:CDS |
| TCGTCAAGCTTAAAGGGATT+AGG | 0.343557 | 1_2:+44156061 | None:intergenic |
| TAACGAGTTGAGGCCTCATT+TGG | 0.343868 | 1_2:-44154956 | Msa0071850:CDS |
| GGGTTGATCACTGCGAAAAT+AGG | 0.358665 | 1_2:+44152798 | None:intergenic |
| CCTGAAGAGGATTTCTTGTC+AGG | 0.368222 | 1_2:-44155754 | Msa0071850:intron |
| CAAGGAAAATTATCTTTGAA+TGG | 0.376940 | 1_2:-44152749 | Msa0071850:CDS |
| GAGCTGAGATTTCTGTTCTT+GGG | 0.379012 | 1_2:+44156084 | None:intergenic |
| CGTCAAGCTTAAAGGGATTA+GGG | 0.380837 | 1_2:+44156062 | None:intergenic |
| GGATTCCTCTTGTTGTGTAT+TGG | 0.381172 | 1_2:-44155171 | Msa0071850:CDS |
| AAGGAAAATTATCTTTGAAT+GGG | 0.400095 | 1_2:-44152748 | Msa0071850:CDS |
| TGGGCAGCATGGTCTGCTTT+CGG | 0.406610 | 1_2:-44155238 | Msa0071850:CDS |
| ACACGTCCACAAGTAGGATT+TGG | 0.408497 | 1_2:+44151150 | None:intergenic |
| ATCACCTCAGAGACTTCTCC+TGG | 0.410904 | 1_2:-44155456 | Msa0071850:CDS |
| GATAGATACATATTCATCTA+TGG | 0.412586 | 1_2:-44151644 | Msa0071850:CDS |
| AGGCAACAACCAAGTTAAAC+AGG | 0.412902 | 1_2:-44154686 | Msa0071850:intron |
| CTATGATTCAGGGCATGAAA+TGG | 0.422094 | 1_2:-44151667 | Msa0071850:intron |
| TGGTTGTTGCCTATAAATAT+TGG | 0.423025 | 1_2:+44154697 | None:intergenic |
| CAGCACTAACCTGTTTAACT+TGG | 0.423065 | 1_2:+44154677 | None:intergenic |
| CCTGACAAGAAATCCTCTTC+AGG | 0.423986 | 1_2:+44155754 | None:intergenic |
| TGGGTCGTAGTGCCATTGAT+TGG | 0.424583 | 1_2:+44156121 | None:intergenic |
| GTCTGCTTTCGGTTATGACT+TGG | 0.426387 | 1_2:-44155227 | Msa0071850:CDS |
| GCTACCATTGTTGCCTGTAC+TGG | 0.428950 | 1_2:-44155142 | Msa0071850:CDS |
| GGGTGATATAAACTTTGTTA+AGG | 0.430161 | 1_2:+44156029 | None:intergenic |
| TCAATATCGTCAAGCTTAAA+GGG | 0.433331 | 1_2:+44156055 | None:intergenic |
| TTTAAATAAAAGGTATGTGT+TGG | 0.439529 | 1_2:-44152889 | Msa0071850:intron |
| GATAAAAGGTTTCAAGAAAG+AGG | 0.440536 | 1_2:-44153261 | Msa0071850:CDS |
| TGAAGATATCTTCAAGAAAT+GGG | 0.441441 | 1_2:-44152691 | Msa0071850:CDS |
| TGTTGGAGACAAGCTTGAAA+AGG | 0.463060 | 1_2:+44155972 | None:intergenic |
| CTCTTCAGGACAGAGAAGTC+TGG | 0.466217 | 1_2:+44155768 | None:intergenic |
| CACCCATGTCAAAGATTATG+AGG | 0.466569 | 1_2:-44156011 | Msa0071850:CDS |
| GATTCCCATTGTGGATAATT+GGG | 0.467568 | 1_2:-44153222 | Msa0071850:CDS |
| GCCTGTACTGGTAACCTTGT+CGG | 0.472360 | 1_2:-44155130 | Msa0071850:CDS |
| TTCTCTGAGCTACCAGGGCG+TGG | 0.475211 | 1_2:-44152861 | Msa0071850:CDS |
| ATTTCGAGATTAGACAGCAT+TGG | 0.478991 | 1_2:-44153344 | Msa0071850:CDS |
| TCAGCCACAGTTTGATACAT+AGG | 0.485178 | 1_2:+44151318 | None:intergenic |
| CATTCATTATAACACCTTGA+GGG | 0.485580 | 1_2:+44152778 | None:intergenic |
| ATTTGAAAGAAAGCATGAAA+TGG | 0.489829 | 1_2:-44153172 | Msa0071850:intron |
| TTCTTGAGACTTCTGATCAA+AGG | 0.489932 | 1_2:-44154742 | Msa0071850:CDS |
| TATGATTCAGGGCATGAAAT+GGG | 0.490425 | 1_2:-44151666 | Msa0071850:intron |
| TGCACATTCTGCTGTGCCGC+GGG | 0.492853 | 1_2:+44155504 | None:intergenic |
| GAACCTTTCTGAATTGAACT+TGG | 0.497414 | 1_2:+44155320 | None:intergenic |
| ACTTTGCAACTTTCCAAATG+AGG | 0.497491 | 1_2:+44154943 | None:intergenic |
| TCATCCCAATTATCCACAAT+GGG | 0.497534 | 1_2:+44153218 | None:intergenic |
| ACCGACAAGGTTACCAGTAC+AGG | 0.500684 | 1_2:+44155129 | None:intergenic |
| GGAATCCATTGCATAGCATC+AGG | 0.501216 | 1_2:+44155187 | None:intergenic |
| AAATTAATAAGATTTGATAC+AGG | 0.501510 | 1_2:+44156188 | None:intergenic |
| TCCAAAGATGTACCAATCAA+TGG | 0.506446 | 1_2:-44156133 | Msa0071850:CDS |
| GTTGGAGACAAGCTTGAAAA+GGG | 0.511266 | 1_2:+44155973 | None:intergenic |
| AGGAGAAGTCTCTGAGGTGA+TGG | 0.514175 | 1_2:+44155458 | None:intergenic |
| TAGCCAAGTTCAATTCAGAA+AGG | 0.519066 | 1_2:-44155323 | Msa0071850:CDS |
| GGAGAATCCACATTGTTGTC+TGG | 0.519858 | 1_2:+44155479 | None:intergenic |
| TTCTTTATTATCCCACGCCC+TGG | 0.524143 | 1_2:+44152849 | None:intergenic |
| GAACACTTCTCTGAGCTACC+AGG | 0.528519 | 1_2:-44152867 | Msa0071850:CDS |
| GAAAGTAGATATCAATATTG+AGG | 0.532242 | 1_2:-44152646 | Msa0071850:intron |
| AGTTGAGGCAGAGAGGATGT+TGG | 0.533320 | 1_2:+44155955 | None:intergenic |
| GGCACTACGACCCAAAAGAA+TGG | 0.536228 | 1_2:-44156112 | Msa0071850:CDS |
| TCCTACTTGTGGACGTGTGA+TGG | 0.538034 | 1_2:-44151145 | Msa0071850:CDS |
| CTGAGATTTCTGTTCTTGGG+AGG | 0.538881 | 1_2:+44156087 | None:intergenic |
| ACAAGTTCAGTTATATCAGC+AGG | 0.544593 | 1_2:+44155298 | None:intergenic |
| CAGACTTCTCTGTCCTGAAG+AGG | 0.553925 | 1_2:-44155767 | Msa0071850:CDS |
| AGACTTCTGATCAAAGGCAA+TGG | 0.558021 | 1_2:-44154736 | Msa0071850:CDS |
| TTCCTCATAATCTTTGACAT+GGG | 0.560884 | 1_2:+44156009 | None:intergenic |
| ATTCCTCATAATCTTTGACA+TGG | 0.565424 | 1_2:+44156008 | None:intergenic |
| TTCATCCCAATTATCCACAA+TGG | 0.566307 | 1_2:+44153217 | None:intergenic |
| AGGAAAATTATCTTTGAATG+GGG | 0.566944 | 1_2:-44152747 | Msa0071850:CDS |
| TCATTCATTATAACACCTTG+AGG | 0.567246 | 1_2:+44152777 | None:intergenic |
| TTATAATGAATGAGAATGCA+AGG | 0.574786 | 1_2:-44152767 | Msa0071850:CDS |
| TTGTTGCCTATAAATATTGG+TGG | 0.577295 | 1_2:+44154700 | None:intergenic |
| GTGCACATTCTGCTGTGCCG+CGG | 0.581489 | 1_2:+44155503 | None:intergenic |
| CTTTGCCTGATGCTATGCAA+TGG | 0.584464 | 1_2:-44155192 | Msa0071850:CDS |
| ACTGTCCAATACACAACAAG+AGG | 0.585978 | 1_2:+44155166 | None:intergenic |
| ATGTGGTGGTTAACGAGTTG+AGG | 0.588601 | 1_2:-44154966 | Msa0071850:CDS |
| ATATCTTCAAGAAATGGGAA+TGG | 0.602647 | 1_2:-44152686 | Msa0071850:CDS |
| ACTTGTCCAAATCCTACTTG+TGG | 0.603163 | 1_2:-44151156 | Msa0071850:CDS |
| AGTTCCAGAAATCTGAGTTG+AGG | 0.604866 | 1_2:+44155940 | None:intergenic |
| TACATCTTTGGACAATGCAG+TGG | 0.608358 | 1_2:+44156144 | None:intergenic |
| ACATTAAACAGTGGGCAGCA+TGG | 0.610506 | 1_2:-44155249 | Msa0071850:CDS |
| ATTCAATCATCAGACACACT+TGG | 0.616321 | 1_2:-44155364 | Msa0071850:CDS |
| TTTGGACAATGCAGTGGACA+TGG | 0.617395 | 1_2:+44156150 | None:intergenic |
| TCATTTGGAAAGTTGCAAAG+TGG | 0.618816 | 1_2:-44154941 | Msa0071850:CDS |
| GTTACCAGTACAGGCAACAA+TGG | 0.619153 | 1_2:+44155138 | None:intergenic |
| TCTCTGAGCTACCAGGGCGT+GGG | 0.623157 | 1_2:-44152860 | Msa0071850:CDS |
| AAATCTGAGTTGAGGCAGAG+AGG | 0.625519 | 1_2:+44155948 | None:intergenic |
| GTTACAAGACATTAAACAGT+GGG | 0.627387 | 1_2:-44155257 | Msa0071850:CDS |
| TCACCTCAGAGACTTCTCCT+GGG | 0.638066 | 1_2:-44155455 | Msa0071850:CDS |
| TTCGCAGTGATCAACCCTCA+AGG | 0.640109 | 1_2:-44152792 | Msa0071850:CDS |
| AGATACATATTCATCTATGG+AGG | 0.642307 | 1_2:-44151641 | Msa0071850:CDS |
| CACCTAGCAGAAATTAAGCA+AGG | 0.644336 | 1_2:-44156234 | None:intergenic |
| TCCATCACACGTCCACAAGT+AGG | 0.659029 | 1_2:+44151144 | None:intergenic |
| CTTCCCAGGAGAAGTCTCTG+AGG | 0.675866 | 1_2:+44155452 | None:intergenic |
| AACTATTTGGATCATCACGA+TGG | 0.682485 | 1_2:+44151094 | None:intergenic |
| TACTTGTGGACGTGTGATGG+AGG | 0.687419 | 1_2:-44151142 | Msa0071850:CDS |
| AACACTTCTCTGAGCTACCA+GGG | 0.697242 | 1_2:-44152866 | Msa0071850:CDS |
| TGTTACAAGACATTAAACAG+TGG | 0.717621 | 1_2:-44155258 | Msa0071850:CDS |
| TGACAGATGATAACGACCCG+CGG | 0.734185 | 1_2:-44155520 | Msa0071850:intron |
| TGAACCTATGTATCAAACTG+TGG | 0.735680 | 1_2:-44151322 | Msa0071850:CDS |
| GTGCACACCAGACAACAATG+TGG | 0.739193 | 1_2:-44155486 | Msa0071850:CDS |
| GAACTTACGATATACCGACA+AGG | 0.746980 | 1_2:+44155116 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATATATATAT+AGG | - | chr1_2:44152676-44152695 | Msa0071850:CDS | 0.0% |
| !! | TATATATATATATATATATA+GGG | - | chr1_2:44152677-44152696 | Msa0071850:CDS | 0.0% |
| !! | ATATATATATATATATATAT+GGG | + | chr1_2:44152676-44152695 | None:intergenic | 0.0% |
| !! | TATATATATATATATATATA+TGG | + | chr1_2:44152677-44152696 | None:intergenic | 0.0% |
| !! | TATTATCAGATTATAAAAAA+AGG | - | chr1_2:44152306-44152325 | Msa0071850:intron | 10.0% |
| !! | AAATTAATAAGATTTGATAC+AGG | + | chr1_2:44151117-44151136 | None:intergenic | 15.0% |
| !! | TATTAAAATGTATAAGTGAA+AGG | + | chr1_2:44151415-44151434 | None:intergenic | 15.0% |
| !! | AATAAAAAAAAAAACTCCAT+CGG | - | chr1_2:44151625-44151644 | Msa0071850:intron | 15.0% |
| !!! | TTTTATTAATCTGTATGAAA+TGG | - | chr1_2:44151700-44151719 | Msa0071850:intron | 15.0% |
| !! | AGTATATGAAGAAAAAAATT+GGG | + | chr1_2:44153662-44153681 | None:intergenic | 15.0% |
| !! | TAGTATATGAAGAAAAAAAT+TGG | + | chr1_2:44153663-44153682 | None:intergenic | 15.0% |
| !! | TAAAAGATAACATAGTAAAA+GGG | + | chr1_2:44153872-44153891 | None:intergenic | 15.0% |
| !! | AAAAAACTGAATTATGATAT+TGG | - | chr1_2:44154474-44154493 | Msa0071850:intron | 15.0% |
| !! | TTTATTATAGCTTTCATAAT+TGG | + | chr1_2:44155071-44155090 | None:intergenic | 15.0% |
| !! | TATATACATGTAAGTGTAAA+TGG | - | chr1_2:44152258-44152277 | Msa0071850:intron | 20.0% |
| !! | TACATAAATAACTACATATG+TGG | - | chr1_2:44152391-44152410 | Msa0071850:intron | 20.0% |
| !!! | ATATTGTTTCCAATTTTTGT+AGG | - | chr1_2:44152476-44152495 | Msa0071850:intron | 20.0% |
| !!! | TATTGTTTCCAATTTTTGTA+GGG | - | chr1_2:44152477-44152496 | Msa0071850:intron | 20.0% |
| !!! | TGATTTAAAGAAGCTTTAAA+AGG | + | chr1_2:44153112-44153131 | None:intergenic | 20.0% |
| !!! | GTTGACATTCTTTTTATTTT+AGG | + | chr1_2:44153216-44153235 | None:intergenic | 20.0% |
| !! | AATCTGAGTACAATTATATT+GGG | + | chr1_2:44153259-44153278 | None:intergenic | 20.0% |
| !! | TCTTGTAAATGAATAAAACA+TGG | - | chr1_2:44153304-44153323 | Msa0071850:CDS | 20.0% |
| !! | CACATGAAAATTAATCTTAA+TGG | + | chr1_2:44153358-44153377 | None:intergenic | 20.0% |
| !! | AGTAAATTTCATTAACATGT+CGG | + | chr1_2:44153412-44153431 | None:intergenic | 20.0% |
| !! | GAAAATCATATCATTCAAAA+TGG | + | chr1_2:44153497-44153516 | None:intergenic | 20.0% |
| !! | TATTCTTACTTGGTATAAAA+AGG | - | chr1_2:44153735-44153754 | Msa0071850:intron | 20.0% |
| !! | GTAAAAGATAACATAGTAAA+AGG | + | chr1_2:44153873-44153892 | None:intergenic | 20.0% |
| !! | AACTTTAGATTTATGAAGTA+CGG | - | chr1_2:44154181-44154200 | Msa0071850:intron | 20.0% |
| !! | TTTAGTGTAAATATATGTGT+CGG | - | chr1_2:44154272-44154291 | Msa0071850:intron | 20.0% |
| !!! | TAAATAATTTCCATGCATTT+TGG | - | chr1_2:44154366-44154385 | Msa0071850:intron | 20.0% |
| !!! | TTTAAATAAAAGGTATGTGT+TGG | - | chr1_2:44154413-44154432 | Msa0071850:intron | 20.0% |
| !! | AAGGAAAATTATCTTTGAAT+GGG | - | chr1_2:44154554-44154573 | Msa0071850:intron | 20.0% |
| !!! | TTTTTGTCTTGTCATTTTTT+TGG | + | chr1_2:44155350-44155369 | None:intergenic | 20.0% |
| !! | TTAATTGTTCTTATGATTGA+AGG | + | chr1_2:44155483-44155502 | None:intergenic | 20.0% |
| ! | AAATTATCCTTATTAACCGA+TGG | + | chr1_2:44151644-44151663 | None:intergenic | 25.0% |
| ! | ATGTATATACGATATAGTGA+CGG | + | chr1_2:44152247-44152266 | None:intergenic | 25.0% |
| !! | AATGGTTCTTTTATTCTTGT+AGG | - | chr1_2:44152276-44152295 | Msa0071850:intron | 25.0% |
| !! | ATGGTTCTTTTATTCTTGTA+GGG | - | chr1_2:44152277-44152296 | Msa0071850:intron | 25.0% |
| ! | TGTATATTCCCTACAAAAAT+TGG | + | chr1_2:44152488-44152507 | None:intergenic | 25.0% |
| ! | CAAATACCACCAATATTTAT+AGG | - | chr1_2:44152596-44152615 | Msa0071850:intron | 25.0% |
| ! | ATAAAAGACACCTTCATAAA+AGG | - | chr1_2:44152905-44152924 | Msa0071850:intron | 25.0% |
| ! | GAATCTGAGTACAATTATAT+TGG | + | chr1_2:44153260-44153279 | None:intergenic | 25.0% |
| ! | TAAATTTCATTAACATGTCG+GGG | + | chr1_2:44153410-44153429 | None:intergenic | 25.0% |
| ! | GTAAATTTCATTAACATGTC+GGG | + | chr1_2:44153411-44153430 | None:intergenic | 25.0% |
| !! | ATGTATTCATGTGTTTTACA+AGG | + | chr1_2:44153563-44153582 | None:intergenic | 25.0% |
| ! | TTACTAAATGATTACTATGC+AGG | - | chr1_2:44153586-44153605 | Msa0071850:intron | 25.0% |
| ! | TACTAAATGATTACTATGCA+GGG | - | chr1_2:44153587-44153606 | Msa0071850:intron | 25.0% |
| ! | TTGTTTCATGTATTCTTACT+TGG | - | chr1_2:44153725-44153744 | Msa0071850:intron | 25.0% |
| !!! | ATATTTTAGTCACACCAATA+TGG | - | chr1_2:44153832-44153851 | Msa0071850:intron | 25.0% |
| !! | ATTTGAAAGAAAGCATGAAA+TGG | - | chr1_2:44154130-44154149 | Msa0071850:intron | 25.0% |
| ! | TATCAAATTATTAACGGTGT+CGG | + | chr1_2:44154241-44154260 | None:intergenic | 25.0% |
| ! | TTATAATGAATGAGAATGCA+AGG | - | chr1_2:44154535-44154554 | Msa0071850:intron | 25.0% |
| ! | CAAGGAAAATTATCTTTGAA+TGG | - | chr1_2:44154553-44154572 | Msa0071850:intron | 25.0% |
| ! | AGGAAAATTATCTTTGAATG+GGG | - | chr1_2:44154555-44154574 | Msa0071850:intron | 25.0% |
| ! | TGAAGATATCTTCAAGAAAT+GGG | - | chr1_2:44154611-44154630 | Msa0071850:intron | 25.0% |
| ! | GAAAGTAGATATCAATATTG+AGG | - | chr1_2:44154656-44154675 | Msa0071850:intron | 25.0% |
| ! | TTAAAAATGTGTCTGTAGTT+TGG | + | chr1_2:44154687-44154706 | None:intergenic | 25.0% |
| ! | TTAGATTAACAAGAGATTCA+TGG | + | chr1_2:44154800-44154819 | None:intergenic | 25.0% |
| ! | GATATATTAACACCAAACAA+CGG | - | chr1_2:44154932-44154951 | Msa0071850:intron | 25.0% |
| ! | AAATGATCCACAATATTAGA+TGG | - | chr1_2:44155288-44155307 | Msa0071850:CDS | 25.0% |
| ! | GTAGAGATATTTAACATGAT+AGG | + | chr1_2:44155530-44155549 | None:intergenic | 25.0% |
| ! | GATAGATACATATTCATCTA+TGG | - | chr1_2:44155658-44155677 | Msa0071850:intron | 25.0% |
| ! | ACATCAAACCATAAAAAATG+TGG | - | chr1_2:44155738-44155757 | Msa0071850:intron | 25.0% |
| ! | TGAAAAGTGGAAAAATAATG+TGG | - | chr1_2:44156010-44156029 | Msa0071850:CDS | 25.0% |
| TCAATATCGTCAAGCTTAAA+GGG | + | chr1_2:44151250-44151269 | None:intergenic | 30.0% | |
| ATCAATATCGTCAAGCTTAA+AGG | + | chr1_2:44151251-44151270 | None:intergenic | 30.0% | |
| GGGTGATATAAACTTTGTTA+AGG | + | chr1_2:44151276-44151295 | None:intergenic | 30.0% | |
| TTCCTCATAATCTTTGACAT+GGG | + | chr1_2:44151296-44151315 | None:intergenic | 30.0% | |
| ATTCCTCATAATCTTTGACA+TGG | + | chr1_2:44151297-44151316 | None:intergenic | 30.0% | |
| ! | AAAAACTCCATCGGTTAATA+AGG | - | chr1_2:44151634-44151653 | Msa0071850:CDS | 30.0% |
| GTGCAATTACGTATCTTAAT+AGG | - | chr1_2:44151915-44151934 | Msa0071850:intron | 30.0% | |
| TGAACTTGTCACATTCTTAT+TGG | - | chr1_2:44152018-44152037 | Msa0071850:intron | 30.0% | |
| TGTTACAAGACATTAAACAG+TGG | - | chr1_2:44152044-44152063 | Msa0071850:intron | 30.0% | |
| GTTACAAGACATTAAACAGT+GGG | - | chr1_2:44152045-44152064 | Msa0071850:intron | 30.0% | |
| TTGTTGCCTATAAATATTGG+TGG | + | chr1_2:44152605-44152624 | None:intergenic | 30.0% | |
| TGGTTGTTGCCTATAAATAT+TGG | + | chr1_2:44152608-44152627 | None:intergenic | 30.0% | |
| CAATAATAGTTAAGACACTC+AGG | + | chr1_2:44152652-44152671 | None:intergenic | 30.0% | |
| ! | TTTTATCAAGTCACACCTTA+AGG | - | chr1_2:44152804-44152823 | Msa0071850:CDS | 30.0% |
| AAAGTGAAAATCACACCTTA+AGG | + | chr1_2:44152822-44152841 | None:intergenic | 30.0% | |
| ! | ATAGAAGACACCTTTTATGA+AGG | + | chr1_2:44152918-44152937 | None:intergenic | 30.0% |
| AATCACGTTAGAAATTGCAT+TGG | - | chr1_2:44153127-44153146 | Msa0071850:intron | 30.0% | |
| ATCACGTTAGAAATTGCATT+GGG | - | chr1_2:44153128-44153147 | Msa0071850:intron | 30.0% | |
| TGGGATCACTGTAATAAAAA+TGG | + | chr1_2:44153240-44153259 | None:intergenic | 30.0% | |
| GTACTCAGATTCTTTAAGTA+AGG | - | chr1_2:44153268-44153287 | Msa0071850:CDS | 30.0% | |
| CAAAATGGAAAACAGAAATC+TGG | + | chr1_2:44153482-44153501 | None:intergenic | 30.0% | |
| ACTAAATGATTACTATGCAG+GGG | - | chr1_2:44153588-44153607 | Msa0071850:intron | 30.0% | |
| AATTGGGTAATAATCTAGTG+TGG | + | chr1_2:44153646-44153665 | None:intergenic | 30.0% | |
| TTAAAGCACAAGAGCAAAAA+TGG | + | chr1_2:44153772-44153791 | None:intergenic | 30.0% | |
| AAGATAACATAGTAAAAGGG+CGG | + | chr1_2:44153869-44153888 | None:intergenic | 30.0% | |
| !!! | AATTTTTTTCTTCCCAACAC+AGG | - | chr1_2:44153897-44153916 | Msa0071850:intron | 30.0% |
| !!! | ATTTTTTTCTTCCCAACACA+GGG | - | chr1_2:44153898-44153917 | Msa0071850:intron | 30.0% |
| AAACCACAAGAAGTGATAAA+AGG | - | chr1_2:44154027-44154046 | Msa0071850:intron | 30.0% | |
| ! | AAACCTTTTATCACTTCTTG+TGG | + | chr1_2:44154033-44154052 | None:intergenic | 30.0% |
| GATAAAAGGTTTCAAGAAAG+AGG | - | chr1_2:44154041-44154060 | Msa0071850:intron | 30.0% | |
| ! | AAGAGGATTTCAAGATTTTG+TGG | - | chr1_2:44154058-44154077 | Msa0071850:intron | 30.0% |
| AGCATATCTAAAAAGCTATG+AGG | + | chr1_2:44154346-44154365 | None:intergenic | 30.0% | |
| ATTGTTAGTACCAAAATGCA+TGG | + | chr1_2:44154379-44154398 | None:intergenic | 30.0% | |
| CATTCATTATAACACCTTGA+GGG | + | chr1_2:44154527-44154546 | None:intergenic | 30.0% | |
| TCATTCATTATAACACCTTG+AGG | + | chr1_2:44154528-44154547 | None:intergenic | 30.0% | |
| CTGAAGATATCTTCAAGAAA+TGG | - | chr1_2:44154610-44154629 | Msa0071850:intron | 30.0% | |
| ATATCTTCAAGAAATGGGAA+TGG | - | chr1_2:44154616-44154635 | Msa0071850:intron | 30.0% | |
| !! | TGAACTCTTGTTGTACTTTT+CGG | + | chr1_2:44154995-44155014 | None:intergenic | 30.0% |
| !! | TCAAAACCCATTTTTATGTG+CGG | + | chr1_2:44155046-44155065 | None:intergenic | 30.0% |
| TATCTATTTGGTACTTCTTC+CGG | + | chr1_2:44155267-44155286 | None:intergenic | 30.0% | |
| GTGGATCATTTCTATCTATT+TGG | + | chr1_2:44155279-44155298 | None:intergenic | 30.0% | |
| GTTTACTCCATCTAATATTG+TGG | + | chr1_2:44155298-44155317 | None:intergenic | 30.0% | |
| ! | AAGACAAATTTGTTTCGTAG+AGG | + | chr1_2:44155416-44155435 | None:intergenic | 30.0% |
| ACGAAACAAATTTGTCTTAG+AGG | - | chr1_2:44155418-44155437 | Msa0071850:CDS | 30.0% | |
| CGAAACAAATTTGTCTTAGA+GGG | - | chr1_2:44155419-44155438 | Msa0071850:CDS | 30.0% | |
| TATGATGTTACCTATGATTC+AGG | - | chr1_2:44155624-44155643 | Msa0071850:intron | 30.0% | |
| ATGATGTTACCTATGATTCA+GGG | - | chr1_2:44155625-44155644 | Msa0071850:intron | 30.0% | |
| AGATACATATTCATCTATGG+AGG | - | chr1_2:44155661-44155680 | Msa0071850:intron | 30.0% | |
| !!! | GTTGGTTTTTTTTTCCTAGT+TGG | + | chr1_2:44155783-44155802 | None:intergenic | 30.0% |
| ! | CAAAAGTATGGAATCTTTGT+TGG | + | chr1_2:44155801-44155820 | None:intergenic | 30.0% |
| ! | CAACAAAGATTCCATACTTT+TGG | - | chr1_2:44155799-44155818 | Msa0071850:intron | 30.0% |
| ! | AAAGATTCCATACTTTTGGA+TGG | - | chr1_2:44155803-44155822 | Msa0071850:intron | 30.0% |
| ! | AAGATTCCATACTTTTGGAT+GGG | - | chr1_2:44155804-44155823 | Msa0071850:intron | 30.0% |
| TCCAAAGATGTACCAATCAA+TGG | - | chr1_2:44151169-44151188 | Msa0071850:CDS | 35.0% | |
| ! | GTCAGGTTAGTTGTTAATGT+CGG | - | chr1_2:44151565-44151584 | Msa0071850:intron | 35.0% |
| GATAGACGAAAGAATCAAGA+TGG | + | chr1_2:44151677-44151696 | None:intergenic | 35.0% | |
| ATTCAATCATCAGACACACT+TGG | - | chr1_2:44151938-44151957 | Msa0071850:intron | 35.0% | |
| TAGCCAAGTTCAATTCAGAA+AGG | - | chr1_2:44151979-44151998 | Msa0071850:intron | 35.0% | |
| GAACCTTTCTGAATTGAACT+TGG | + | chr1_2:44151985-44152004 | None:intergenic | 35.0% | |
| ACAAGTTCAGTTATATCAGC+AGG | + | chr1_2:44152007-44152026 | None:intergenic | 35.0% | |
| TAAAAAAAGGCTCTCTCATG+TGG | - | chr1_2:44152319-44152338 | Msa0071850:intron | 35.0% | |
| ACTTTGCAACTTTCCAAATG+AGG | + | chr1_2:44152362-44152381 | None:intergenic | 35.0% | |
| TCATTTGGAAAGTTGCAAAG+TGG | - | chr1_2:44152361-44152380 | Msa0071850:intron | 35.0% | |
| GAAAGTTGCAAAGTGGAAAT+TGG | - | chr1_2:44152368-44152387 | Msa0071850:intron | 35.0% | |
| TTCTTGAGACTTCTGATCAA+AGG | - | chr1_2:44152560-44152579 | Msa0071850:intron | 35.0% | |
| TGATAAAAGACACCACCAAA+GGG | + | chr1_2:44152792-44152811 | None:intergenic | 35.0% | |
| TTGATAAAAGACACCACCAA+AGG | + | chr1_2:44152793-44152812 | None:intergenic | 35.0% | |
| ACACCTTCCTAAAAGTAAGT+TGG | - | chr1_2:44152864-44152883 | Msa0071850:CDS | 35.0% | |
| !! | ATGAGCACCAACTTACTTTT+AGG | + | chr1_2:44152874-44152893 | None:intergenic | 35.0% |
| TTAGAAATTGCATTGGGAAG+TGG | - | chr1_2:44153134-44153153 | Msa0071850:intron | 35.0% | |
| TAATTGTCAATGCCTGTGTT+TGG | + | chr1_2:44153182-44153201 | None:intergenic | 35.0% | |
| GAATAAAACATGGTTGTGAG+TGG | - | chr1_2:44153314-44153333 | Msa0071850:CDS | 35.0% | |
| TTTAGTCACACCAATATGGA+TGG | - | chr1_2:44153836-44153855 | Msa0071850:intron | 35.0% | |
| ATTTCGAGATTAGACAGCAT+TGG | - | chr1_2:44153958-44153977 | Msa0071850:intron | 35.0% | |
| GATTCCCATTGTGGATAATT+GGG | - | chr1_2:44154080-44154099 | Msa0071850:intron | 35.0% | |
| TCATCCCAATTATCCACAAT+GGG | + | chr1_2:44154087-44154106 | None:intergenic | 35.0% | |
| TTCATCCCAATTATCCACAA+TGG | + | chr1_2:44154088-44154107 | None:intergenic | 35.0% | |
| ! | TCATTGGATTAGACGTGTTT+CGG | + | chr1_2:44154314-44154333 | None:intergenic | 35.0% |
| ! | GAATCGATGCTTTTCCTTTT+AGG | - | chr1_2:44154577-44154596 | Msa0071850:intron | 35.0% |
| TCAGCATCACTTATCCTAAA+AGG | + | chr1_2:44154594-44154613 | None:intergenic | 35.0% | |
| ! | TCAAGAAATGGGAATGGTTT+TGG | - | chr1_2:44154622-44154641 | Msa0071850:intron | 35.0% |
| ! | TACTTTTCGGTTGTCTTAGA+TGG | + | chr1_2:44154982-44155001 | None:intergenic | 35.0% |
| CAATACCCGCACATAAAAAT+GGG | - | chr1_2:44155037-44155056 | Msa0071850:intron | 35.0% | |
| !! | CAAAACCCATTTTTATGTGC+GGG | + | chr1_2:44155045-44155064 | None:intergenic | 35.0% |
| ATGTTAAACTTCTCTCCTTC+TGG | + | chr1_2:44155119-44155138 | None:intergenic | 35.0% | |
| !! | TAGAGGCATTATTACTTCTG+AGG | + | chr1_2:44155399-44155418 | None:intergenic | 35.0% |
| TATGATTCAGGGCATGAAAT+GGG | - | chr1_2:44155636-44155655 | Msa0071850:intron | 35.0% | |
| CAATTGCTCTTGTGAATTCT+TGG | + | chr1_2:44155705-44155724 | None:intergenic | 35.0% | |
| CAAGAATTCACAAGAGCAAT+TGG | - | chr1_2:44155703-44155722 | Msa0071850:intron | 35.0% | |
| !!! | GTCAACGTCCACATTTTTTA+TGG | + | chr1_2:44155749-44155768 | None:intergenic | 35.0% |
| !!! | GGTTTTTTTTTCCTAGTTGG+TGG | + | chr1_2:44155780-44155799 | None:intergenic | 35.0% |
| TCTATACCCATCCAAAAGTA+TGG | + | chr1_2:44155813-44155832 | None:intergenic | 35.0% | |
| ! | TACTTTTGGATGGGTATAGA+TGG | - | chr1_2:44155813-44155832 | Msa0071850:intron | 35.0% |
| !! | CATGTTACACTTTTTGGTCA+TGG | - | chr1_2:44155957-44155976 | Msa0071850:CDS | 35.0% |
| TGAACCTATGTATCAAACTG+TGG | - | chr1_2:44155980-44155999 | Msa0071850:CDS | 35.0% | |
| !! | AAGCTTTGATGAAGCTTTTC+AGG | - | chr1_2:44156043-44156062 | Msa0071850:CDS | 35.0% |
| AACTATTTGGATCATCACGA+TGG | + | chr1_2:44156211-44156230 | None:intergenic | 35.0% | |
| TACATCTTTGGACAATGCAG+TGG | + | chr1_2:44151161-44151180 | None:intergenic | 40.0% | |
| ! | GCCATTGATTGGTACATCTT+TGG | + | chr1_2:44151173-44151192 | None:intergenic | 40.0% |
| !!! | TTGGGAGGTACCATTCTTTT+GGG | + | chr1_2:44151203-44151222 | None:intergenic | 40.0% |
| GAGCTGAGATTTCTGTTCTT+GGG | + | chr1_2:44151221-44151240 | None:intergenic | 40.0% | |
| CGTCAAGCTTAAAGGGATTA+GGG | + | chr1_2:44151243-44151262 | None:intergenic | 40.0% | |
| TCGTCAAGCTTAAAGGGATT+AGG | + | chr1_2:44151244-44151263 | None:intergenic | 40.0% | |
| CACCCATGTCAAAGATTATG+AGG | - | chr1_2:44151291-44151310 | Msa0071850:CDS | 40.0% | |
| GTTGGAGACAAGCTTGAAAA+GGG | + | chr1_2:44151332-44151351 | None:intergenic | 40.0% | |
| TGTTGGAGACAAGCTTGAAA+AGG | + | chr1_2:44151333-44151352 | None:intergenic | 40.0% | |
| AGTTCCAGAAATCTGAGTTG+AGG | + | chr1_2:44151365-44151384 | None:intergenic | 40.0% | |
| ! | TATCAATGCTTTTGCTTCCC+AGG | + | chr1_2:44151867-44151886 | None:intergenic | 40.0% |
| AACTCTAGCTGCATTCTCTT+TGG | - | chr1_2:44151886-44151905 | Msa0071850:intron | 40.0% | |
| ! | GGATTCCTCTTGTTGTGTAT+TGG | - | chr1_2:44152131-44152150 | Msa0071850:intron | 40.0% |
| ACTGTCCAATACACAACAAG+AGG | + | chr1_2:44152139-44152158 | None:intergenic | 40.0% | |
| GAACTTACGATATACCGACA+AGG | + | chr1_2:44152189-44152208 | None:intergenic | 40.0% | |
| AGACTTCTGATCAAAGGCAA+TGG | - | chr1_2:44152566-44152585 | Msa0071850:intron | 40.0% | |
| AGGCAACAACCAAGTTAAAC+AGG | - | chr1_2:44152616-44152635 | Msa0071850:intron | 40.0% | |
| CAGCACTAACCTGTTTAACT+TGG | + | chr1_2:44152628-44152647 | None:intergenic | 40.0% | |
| CAAGTTAAACAGGTTAGTGC+TGG | - | chr1_2:44152626-44152645 | Msa0071850:intron | 40.0% | |
| TTATGTTAGAAGCCACCCTT+TGG | - | chr1_2:44152774-44152793 | Msa0071850:CDS | 40.0% | |
| !! | GCACCAACTTACTTTTAGGA+AGG | + | chr1_2:44152870-44152889 | None:intergenic | 40.0% |
| GTTTGTGCAAGCGATAGATT+TGG | - | chr1_2:44153059-44153078 | Msa0071850:intron | 40.0% | |
| ATTGCATTGGGAAGTGGAAA+AGG | - | chr1_2:44153140-44153159 | Msa0071850:intron | 40.0% | |
| AATGCCTGTGTTTGGATTCA+CGG | + | chr1_2:44153174-44153193 | None:intergenic | 40.0% | |
| GCACAAGAGCAAAAATGGTT+TGG | + | chr1_2:44153767-44153786 | None:intergenic | 40.0% | |
| AGACTTCAATACCCTGTGTT+GGG | + | chr1_2:44153912-44153931 | None:intergenic | 40.0% | |
| AAGACTTCAATACCCTGTGT+TGG | + | chr1_2:44153913-44153932 | None:intergenic | 40.0% | |
| ! | GATTTTGTGGATTCCCATTG+TGG | - | chr1_2:44154071-44154090 | Msa0071850:intron | 40.0% |
| GGATTCCCATTGTGGATAAT+TGG | - | chr1_2:44154079-44154098 | Msa0071850:intron | 40.0% | |
| ATGAAGTACGGATCCAAACA+CGG | - | chr1_2:44154193-44154212 | Msa0071850:intron | 40.0% | |
| GTCTGTATCATATCCGTGTT+TGG | + | chr1_2:44154209-44154228 | None:intergenic | 40.0% | |
| TATGAGGCACAAACACTCAT+TGG | + | chr1_2:44154330-44154349 | None:intergenic | 40.0% | |
| !! | CCATTTTTATGTGCGGGTAT+TGG | + | chr1_2:44155039-44155058 | None:intergenic | 40.0% |
| CCAATACCCGCACATAAAAA+TGG | - | chr1_2:44155036-44155055 | Msa0071850:intron | 40.0% | |
| !! | TGTAGCTTTAAACCACCAGA+AGG | - | chr1_2:44155101-44155120 | Msa0071850:intron | 40.0% |
| TTAAACTTCTCTCCTTCTGG+TGG | + | chr1_2:44155116-44155135 | None:intergenic | 40.0% | |
| ACATTCTCCAGTATCTGAGT+CGG | - | chr1_2:44155135-44155154 | Msa0071850:CDS | 40.0% | |
| AAATTCTCCGACTCAGATAC+TGG | + | chr1_2:44155145-44155164 | None:intergenic | 40.0% | |
| ! | TTGTTCGTAGGTGTTATGGA+AGG | + | chr1_2:44155199-44155218 | None:intergenic | 40.0% |
| TTGCTTGTTCGTAGGTGTTA+TGG | + | chr1_2:44155203-44155222 | None:intergenic | 40.0% | |
| !! | GATTTGGTTTGCTTGTTCGT+AGG | + | chr1_2:44155211-44155230 | None:intergenic | 40.0% |
| GTTCGCTTATGCATCTGATT+TGG | + | chr1_2:44155227-44155246 | None:intergenic | 40.0% | |
| ! | ACATCGAGATTTTCCATAGC+CGG | - | chr1_2:44155245-44155264 | Msa0071850:CDS | 40.0% |
| TAGTTGGTTAGGAATTGGCT+TGG | + | chr1_2:44155322-44155341 | None:intergenic | 40.0% | |
| !!! | CATTTTTTTGGCCTGGTAGT+TGG | + | chr1_2:44155338-44155357 | None:intergenic | 40.0% |
| !!! | GTCTTGTCATTTTTTTGGCC+TGG | + | chr1_2:44155345-44155364 | None:intergenic | 40.0% |
| ! | TGTTTGCTTGGGGTCTTTTT+CGG | + | chr1_2:44155454-44155473 | None:intergenic | 40.0% |
| AAAAAGACCCCAAGCAAACA+CGG | - | chr1_2:44155454-44155473 | Msa0071850:CDS | 40.0% | |
| CATTTCATGCCCTGAATCAT+AGG | + | chr1_2:44155637-44155656 | None:intergenic | 40.0% | |
| CTATGATTCAGGGCATGAAA+TGG | - | chr1_2:44155635-44155654 | Msa0071850:intron | 40.0% | |
| TGAATTCTTGGACCCACTTT+GGG | + | chr1_2:44155693-44155712 | None:intergenic | 40.0% | |
| ! | GACATTGATTACCACCAACT+AGG | - | chr1_2:44155766-44155785 | Msa0071850:CDS | 40.0% |
| ATAGAAGAACCCATCCTGAT+GGG | + | chr1_2:44155926-44155945 | None:intergenic | 40.0% | |
| ! | GATGGGTTCTTCTATGTAGA+GGG | - | chr1_2:44155931-44155950 | Msa0071850:CDS | 40.0% |
| ! | GGGCATCATGTTACACTTTT+TGG | - | chr1_2:44155951-44155970 | Msa0071850:CDS | 40.0% |
| TCAGCCACAGTTTGATACAT+AGG | + | chr1_2:44155987-44156006 | None:intergenic | 40.0% | |
| !! | CTGTGGCTGATTTTGAAAAG+TGG | - | chr1_2:44155997-44156016 | Msa0071850:CDS | 40.0% |
| ACTTGTCCAAATCCTACTTG+TGG | - | chr1_2:44156146-44156165 | Msa0071850:CDS | 40.0% | |
| TTTGGACAATGCAGTGGACA+TGG | + | chr1_2:44151155-44151174 | None:intergenic | 45.0% | |
| !!! | CTTGGGAGGTACCATTCTTT+TGG | + | chr1_2:44151204-44151223 | None:intergenic | 45.0% |
| CTGAGATTTCTGTTCTTGGG+AGG | + | chr1_2:44151218-44151237 | None:intergenic | 45.0% | |
| GGAGCTGAGATTTCTGTTCT+TGG | + | chr1_2:44151222-44151241 | None:intergenic | 45.0% | |
| ! | AAATCTGAGTTGAGGCAGAG+AGG | + | chr1_2:44151357-44151376 | None:intergenic | 45.0% |
| TCTGCCTCAACTCAGATTTC+TGG | - | chr1_2:44151358-44151377 | Msa0071850:intron | 45.0% | |
| CCTGACAAGAAATCCTCTTC+AGG | + | chr1_2:44151551-44151570 | None:intergenic | 45.0% | |
| CCTGAAGAGGATTTCTTGTC+AGG | - | chr1_2:44151548-44151567 | Msa0071850:intron | 45.0% | |
| GGAGAATCCACATTGTTGTC+TGG | + | chr1_2:44151826-44151845 | None:intergenic | 45.0% | |
| !! | GCTGCATTCTCTTTGGAGTA+TGG | - | chr1_2:44151893-44151912 | Msa0071850:intron | 45.0% |
| ACATTAAACAGTGGGCAGCA+TGG | - | chr1_2:44152053-44152072 | Msa0071850:intron | 45.0% | |
| GTCTGCTTTCGGTTATGACT+TGG | - | chr1_2:44152075-44152094 | Msa0071850:intron | 45.0% | |
| CTTTGCCTGATGCTATGCAA+TGG | - | chr1_2:44152110-44152129 | Msa0071850:intron | 45.0% | |
| GGAATCCATTGCATAGCATC+AGG | + | chr1_2:44152118-44152137 | None:intergenic | 45.0% | |
| GTTACCAGTACAGGCAACAA+TGG | + | chr1_2:44152167-44152186 | None:intergenic | 45.0% | |
| AAAAAGGCTCTCTCATGTGG+TGG | - | chr1_2:44152322-44152341 | Msa0071850:intron | 45.0% | |
| ATGTGGTGGTTAACGAGTTG+AGG | - | chr1_2:44152336-44152355 | Msa0071850:intron | 45.0% | |
| ! | TAACGAGTTGAGGCCTCATT+TGG | - | chr1_2:44152346-44152365 | Msa0071850:intron | 45.0% |
| TAAAAGACACCACCAAAGGG+TGG | + | chr1_2:44152789-44152808 | None:intergenic | 45.0% | |
| !!! | GGGAAGTGGAAAAGGTGTTT+TGG | - | chr1_2:44153148-44153167 | Msa0071850:intron | 45.0% |
| ATCCAGCATAAGGCATAGTG+TGG | - | chr1_2:44153614-44153633 | Msa0071850:intron | 45.0% | |
| CACACCAATATGGATGGTCT+AGG | - | chr1_2:44153842-44153861 | Msa0071850:intron | 45.0% | |
| !! | TATATGTGTCGGTGTCGTGT+CGG | - | chr1_2:44154283-44154302 | Msa0071850:intron | 45.0% |
| AACACTTCTCTGAGCTACCA+GGG | - | chr1_2:44154436-44154455 | Msa0071850:intron | 45.0% | |
| TTCTTTATTATCCCACGCCC+TGG | + | chr1_2:44154456-44154475 | None:intergenic | 45.0% | |
| ! | GGGTTGATCACTGCGAAAAT+AGG | + | chr1_2:44154507-44154526 | None:intergenic | 45.0% |
| !! | CACCAAACAACGGACTATCT+AGG | - | chr1_2:44154942-44154961 | Msa0071850:CDS | 45.0% |
| !! | CAAACAACGGACTATCTAGG+CGG | - | chr1_2:44154945-44154964 | Msa0071850:CDS | 45.0% |
| TTTGGTACTTCTTCCGGCTA+TGG | + | chr1_2:44155261-44155280 | None:intergenic | 45.0% | |
| CCTGGTAGTTGGTTAGGAAT+TGG | + | chr1_2:44155327-44155346 | None:intergenic | 45.0% | |
| CCAATTCCTAACCAACTACC+AGG | - | chr1_2:44155324-44155343 | Msa0071850:CDS | 45.0% | |
| ! | TTTTGGCCTGGTAGTTGGTT+AGG | + | chr1_2:44155333-44155352 | None:intergenic | 45.0% |
| !! | TATTACTTCTGAGGCTCAGC+AGG | + | chr1_2:44155390-44155409 | None:intergenic | 45.0% |
| AAGGTTTCCGTGTTTGCTTG+GGG | + | chr1_2:44155464-44155483 | None:intergenic | 45.0% | |
| GAAGGTTTCCGTGTTTGCTT+GGG | + | chr1_2:44155465-44155484 | None:intergenic | 45.0% | |
| TGAAGGTTTCCGTGTTTGCT+TGG | + | chr1_2:44155466-44155485 | None:intergenic | 45.0% | |
| GTGAATTCTTGGACCCACTT+TGG | + | chr1_2:44155694-44155713 | None:intergenic | 45.0% | |
| TGTCTCAAACAAGACCCATC+AGG | - | chr1_2:44155909-44155928 | Msa0071850:intron | 45.0% | |
| TCAAACAAGACCCATCAGGA+TGG | - | chr1_2:44155913-44155932 | Msa0071850:intron | 45.0% | |
| CAAACAAGACCCATCAGGAT+GGG | - | chr1_2:44155914-44155933 | Msa0071850:intron | 45.0% | |
| CATAGAAGAACCCATCCTGA+TGG | + | chr1_2:44155927-44155946 | None:intergenic | 45.0% | |
| ! | GGATGGGTTCTTCTATGTAG+AGG | - | chr1_2:44155930-44155949 | Msa0071850:CDS | 45.0% |
| ACACGTCCACAAGTAGGATT+TGG | + | chr1_2:44156155-44156174 | None:intergenic | 45.0% | |
| !!! | TAATTTTATCAAATTATTAA+CGG | + | chr1_2:44154247-44154266 | None:intergenic | 5.0% |
| !!! | TTATTTTTGTTTTAAATAAA+AGG | - | chr1_2:44154403-44154422 | Msa0071850:intron | 5.0% |
| !!! | TTTTTTTTTTTAAAGAATTT+AGG | - | chr1_2:44154852-44154871 | Msa0071850:intron | 5.0% |
| !!! | TTTTTTTTTTAAAGAATTTA+GGG | - | chr1_2:44154853-44154872 | Msa0071850:intron | 5.0% |
| ! | TGGGTCGTAGTGCCATTGAT+TGG | + | chr1_2:44151184-44151203 | None:intergenic | 50.0% |
| GGCACTACGACCCAAAAGAA+TGG | - | chr1_2:44151190-44151209 | Msa0071850:CDS | 50.0% | |
| AGTTGAGGCAGAGAGGATGT+TGG | + | chr1_2:44151350-44151369 | None:intergenic | 50.0% | |
| CTCTTCAGGACAGAGAAGTC+TGG | + | chr1_2:44151537-44151556 | None:intergenic | 50.0% | |
| CAGACTTCTCTGTCCTGAAG+AGG | - | chr1_2:44151535-44151554 | Msa0071850:intron | 50.0% | |
| ! | TGACAGATGATAACGACCCG+CGG | - | chr1_2:44151782-44151801 | Msa0071850:intron | 50.0% |
| GTGCACACCAGACAACAATG+TGG | - | chr1_2:44151816-44151835 | Msa0071850:intron | 50.0% | |
| !! | AGGAGAAGTCTCTGAGGTGA+TGG | + | chr1_2:44151847-44151866 | None:intergenic | 50.0% |
| ATCACCTCAGAGACTTCTCC+TGG | - | chr1_2:44151846-44151865 | Msa0071850:intron | 50.0% | |
| TCACCTCAGAGACTTCTCCT+GGG | - | chr1_2:44151847-44151866 | Msa0071850:intron | 50.0% | |
| GCTACCATTGTTGCCTGTAC+TGG | - | chr1_2:44152160-44152179 | Msa0071850:intron | 50.0% | |
| ! | GCCTGTACTGGTAACCTTGT+CGG | - | chr1_2:44152172-44152191 | Msa0071850:intron | 50.0% |
| ACCGACAAGGTTACCAGTAC+AGG | + | chr1_2:44152176-44152195 | None:intergenic | 50.0% | |
| TGTTAGAAGCCACCCTTTGG+TGG | - | chr1_2:44152777-44152796 | Msa0071850:CDS | 50.0% | |
| AGGTAGCTTCTGCTGAAACG+TGG | + | chr1_2:44153092-44153111 | None:intergenic | 50.0% | |
| TTGGCCGTGAATCCAAACAC+AGG | - | chr1_2:44153167-44153186 | Msa0071850:intron | 50.0% | |
| AGCCACACTATGCCTTATGC+TGG | + | chr1_2:44153619-44153638 | None:intergenic | 50.0% | |
| CGGACCTAGACCATCCATAT+TGG | + | chr1_2:44153849-44153868 | None:intergenic | 50.0% | |
| GAACACTTCTCTGAGCTACC+AGG | - | chr1_2:44154435-44154454 | Msa0071850:intron | 50.0% | |
| TTCGCAGTGATCAACCCTCA+AGG | - | chr1_2:44154510-44154529 | Msa0071850:intron | 50.0% | |
| CGCCTAGATAGTCCGTTGTT+TGG | + | chr1_2:44154947-44154966 | None:intergenic | 50.0% | |
| TCCTACTTGTGGACGTGTGA+TGG | - | chr1_2:44156157-44156176 | Msa0071850:exon | 50.0% | |
| TCCATCACACGTCCACAAGT+AGG | + | chr1_2:44156161-44156180 | None:intergenic | 50.0% | |
| TACTTGTGGACGTGTGATGG+AGG | - | chr1_2:44156160-44156179 | Msa0071850:exon | 50.0% | |
| CTTCCCAGGAGAAGTCTCTG+AGG | + | chr1_2:44151853-44151872 | None:intergenic | 55.0% | |
| TGGGCAGCATGGTCTGCTTT+CGG | - | chr1_2:44152064-44152083 | Msa0071850:intron | 55.0% | |
| ATGGAGGCAACGACCCAAAG+TGG | - | chr1_2:44155677-44155696 | Msa0071850:intron | 55.0% | |
| TGGAGGCAACGACCCAAAGT+GGG | - | chr1_2:44155678-44155697 | Msa0071850:intron | 55.0% | |
| TGCACATTCTGCTGTGCCGC+GGG | + | chr1_2:44151801-44151820 | None:intergenic | 60.0% | |
| GTGCACATTCTGCTGTGCCG+CGG | + | chr1_2:44151802-44151821 | None:intergenic | 60.0% | |
| !! | GCAGGGGAGCATCCAGCATA+AGG | - | chr1_2:44153604-44153623 | Msa0071850:intron | 60.0% |
| TTCTCTGAGCTACCAGGGCG+TGG | - | chr1_2:44154441-44154460 | Msa0071850:intron | 60.0% | |
| TCTCTGAGCTACCAGGGCGT+GGG | - | chr1_2:44154442-44154461 | Msa0071850:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_2 | gene | 44151083 | 44156241 | 44151083 | ID=Msa0071850;Name=Msa0071850 |
| chr1_2 | mRNA | 44151083 | 44156241 | 44151083 | ID=Msa0071850-mRNA-1;Parent=Msa0071850;Name=Msa0071850-mRNA-1;_AED=0.15;_eAED=0.15;_QI=71|0.87|0.77|1|1|1|9|0|590 |
| chr1_2 | exon | 44151083 | 44151374 | 44151083 | ID=Msa0071850-mRNA-1:exon:13331;Parent=Msa0071850-mRNA-1 |
| chr1_2 | exon | 44151629 | 44151678 | 44151629 | ID=Msa0071850-mRNA-1:exon:13330;Parent=Msa0071850-mRNA-1 |
| chr1_2 | exon | 44152647 | 44152899 | 44152647 | ID=Msa0071850-mRNA-1:exon:13329;Parent=Msa0071850-mRNA-1 |
| chr1_2 | exon | 44153173 | 44153405 | 44153173 | ID=Msa0071850-mRNA-1:exon:13328;Parent=Msa0071850-mRNA-1 |
| chr1_2 | exon | 44154687 | 44154826 | 44154687 | ID=Msa0071850-mRNA-1:exon:13327;Parent=Msa0071850-mRNA-1 |
| chr1_2 | exon | 44154935 | 44155026 | 44154935 | ID=Msa0071850-mRNA-1:exon:13326;Parent=Msa0071850-mRNA-1 |
| chr1_2 | exon | 44155124 | 44155536 | 44155124 | ID=Msa0071850-mRNA-1:exon:13325;Parent=Msa0071850-mRNA-1 |
| chr1_2 | exon | 44155755 | 44155808 | 44155755 | ID=Msa0071850-mRNA-1:exon:13324;Parent=Msa0071850-mRNA-1 |
| chr1_2 | exon | 44155925 | 44156241 | 44155925 | ID=Msa0071850-mRNA-1:exon:13323;Parent=Msa0071850-mRNA-1 |
| chr1_2 | five_prime_UTR | 44156171 | 44156241 | 44156171 | ID=Msa0071850-mRNA-1:five_prime_utr;Parent=Msa0071850-mRNA-1 |
| chr1_2 | CDS | 44155925 | 44156170 | 44155925 | ID=Msa0071850-mRNA-1:cds;Parent=Msa0071850-mRNA-1 |
| chr1_2 | CDS | 44155755 | 44155808 | 44155755 | ID=Msa0071850-mRNA-1:cds;Parent=Msa0071850-mRNA-1 |
| chr1_2 | CDS | 44155124 | 44155536 | 44155124 | ID=Msa0071850-mRNA-1:cds;Parent=Msa0071850-mRNA-1 |
| chr1_2 | CDS | 44154935 | 44155026 | 44154935 | ID=Msa0071850-mRNA-1:cds;Parent=Msa0071850-mRNA-1 |
| chr1_2 | CDS | 44154687 | 44154826 | 44154687 | ID=Msa0071850-mRNA-1:cds;Parent=Msa0071850-mRNA-1 |
| chr1_2 | CDS | 44153173 | 44153405 | 44153173 | ID=Msa0071850-mRNA-1:cds;Parent=Msa0071850-mRNA-1 |
| chr1_2 | CDS | 44152647 | 44152899 | 44152647 | ID=Msa0071850-mRNA-1:cds;Parent=Msa0071850-mRNA-1 |
| chr1_2 | CDS | 44151629 | 44151678 | 44151629 | ID=Msa0071850-mRNA-1:cds;Parent=Msa0071850-mRNA-1 |
| chr1_2 | CDS | 44151083 | 44151374 | 44151083 | ID=Msa0071850-mRNA-1:cds;Parent=Msa0071850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
