AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1298850

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1298850 MtrunA17_Chr4g0058651 95.767 189 7 1 1 189 1 188 4.65e-126 352
Msa1298850 MtrunA17_Chr3g0117121 72.316 177 47 2 3 178 2 177 4.10e-85 249
Msa1298850 MtrunA17_Chr7g0227511 60.847 189 57 4 1 189 1 172 2.76e-72 216
Msa1298850 MtrunA17_Chr6g0449641 81.416 113 19 1 1 113 1 111 1.02e-64 196
Msa1298850 MtrunA17_Chr6g0449651 78.261 115 23 1 1 115 59 171 8.73e-63 192
Msa1298850 MtrunA17_Chr8g0353981 66.917 133 40 1 1 133 1 129 5.55e-54 171
Msa1298850 MtrunA17_Chr5g0437571 64.957 117 38 1 9 122 4 120 1.02e-50 161
Msa1298850 MtrunA17_Chr5g0402611 69.091 110 34 0 5 114 2 111 6.63e-50 164
Msa1298850 MtrunA17_Chr3g0115431 64.754 122 43 0 5 126 3 124 9.68e-50 160
Msa1298850 MtrunA17_Chr3g0097221 65.179 112 39 0 6 117 2 113 4.05e-48 158
Msa1298850 MtrunA17_Chr2g0311601 63.551 107 39 0 10 116 12 118 6.29e-48 154
Msa1298850 MtrunA17_Chr4g0043421 65.385 104 36 0 10 113 14 117 1.43e-47 153
Msa1298850 MtrunA17_Chr3g0106101 64.423 104 37 0 9 112 5 108 4.53e-47 152
Msa1298850 MtrunA17_Chr5g0437401 53.383 133 62 0 9 141 9 141 3.32e-46 150
Msa1298850 MtrunA17_Chr3g0114061 66.019 103 35 0 10 112 7 109 4.65e-46 149
Msa1298850 MtrunA17_Chr5g0438091 62.385 109 41 0 10 118 38 146 1.38e-44 146
Msa1298850 MtrunA17_Chr3g0129071 61.468 109 42 0 10 118 46 154 3.14e-44 147
Msa1298850 MtrunA17_Chr3g0113891 63.000 100 37 0 9 108 12 111 1.39e-42 140
Msa1298850 MtrunA17_Chr4g0030001 53.448 116 53 1 2 116 15 130 4.01e-40 134
Msa1298850 MtrunA17_Chr5g0432451 58.015 131 54 1 10 140 42 171 4.29e-40 135
Msa1298850 MtrunA17_Chr7g0260971 59.130 115 43 2 1 111 1 115 2.58e-39 133
Msa1298850 MtrunA17_Chr1g0200201 58.416 101 42 0 12 112 73 173 1.03e-38 132
Msa1298850 MtrunA17_Chr8g0351701 57.944 107 44 1 11 116 23 129 1.49e-38 132
Msa1298850 MtrunA17_Chr8g0351721 54.918 122 52 2 11 131 18 137 3.40e-36 125
Msa1298850 MtrunA17_Chr7g0225111 51.376 109 53 0 10 118 4 112 6.80e-36 121
Msa1298850 MtrunA17_Chr1g0184281 62.105 95 35 1 11 104 15 109 7.08e-36 124
Msa1298850 MtrunA17_Chr7g0245871 62.105 95 35 1 11 104 27 121 2.50e-35 124
Msa1298850 MtrunA17_Chr1g0184271 37.572 173 98 3 11 177 12 180 2.16e-34 121
Msa1298850 MtrunA17_Chr6g0460951 51.852 108 51 1 10 116 39 146 4.87e-34 120
Msa1298850 MtrunA17_Chr8g0374601 48.077 104 54 0 11 114 26 129 5.70e-33 119
Msa1298850 MtrunA17_Chr7g0261031 58.333 96 39 1 10 104 7 102 1.02e-32 117
Msa1298850 MtrunA17_Chr5g0435641 51.485 101 48 1 6 105 2 102 2.10e-32 115
Msa1298850 MtrunA17_Chr5g0444351 48.598 107 55 0 12 118 6 112 4.80e-32 112
Msa1298850 MtrunA17_Chr8g0374591 48.077 104 54 0 11 114 8 111 8.93e-32 111
Msa1298850 MtrunA17_Chr7g0245861 60.000 90 33 2 11 97 12 101 1.40e-29 106
Msa1298850 MtrunA17_Chr4g0059901 48.958 96 49 0 12 107 11 106 1.75e-29 109
Msa1298850 MtrunA17_Chr8g0374581 46.667 105 55 1 11 114 8 112 1.07e-28 106
Msa1298850 MtrunA17_Chr6g0452661 43.878 98 54 1 9 105 7 104 2.31e-27 103
Msa1298850 MtrunA17_Chr6g0460941 48.315 89 45 1 11 98 7 95 2.01e-26 97.1
Msa1298850 MtrunA17_Chr8g0342351 42.000 100 58 0 12 111 13 112 2.05e-25 99.0
Msa1298850 MtrunA17_Chr6g0452691 49.398 83 41 1 9 90 7 89 1.56e-24 94.7
Msa1298850 MtrunA17_Chr6g0452671 36.220 127 72 2 12 130 12 137 1.80e-24 95.1
Msa1298850 MtrunA17_Chr4g0055441 39.423 104 61 2 12 114 3 105 3.08e-23 90.5
Msa1298850 MtrunA17_Chr2g0330201 42.553 94 54 0 12 105 20 113 4.06e-23 93.6
Msa1298850 MtrunA17_Chr4g0040831 39.048 105 64 0 1 105 5 109 6.26e-23 90.9
Msa1298850 MtrunA17_Chr5g0439111 39.252 107 63 2 9 114 7 112 6.31e-20 84.0
Msa1298850 MtrunA17_Chr2g0326041 60.784 51 20 0 10 60 32 82 6.45e-19 77.4
Msa1298850 MtrunA17_Chr4g0046201 35.556 90 58 0 10 99 5 94 4.78e-17 76.6
Msa1298850 MtrunA17_Chr2g0326051 54.098 61 28 0 56 116 5 65 5.51e-16 70.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1298850 AT5G63090.4 67.778 180 46 3 1 171 1 177 9.26e-78 230
Msa1298850 AT5G63090.3 67.778 180 46 3 1 171 1 177 9.26e-78 230
Msa1298850 AT5G63090.2 67.778 180 46 3 1 171 1 177 9.26e-78 230
Msa1298850 AT5G63090.1 67.778 180 46 3 1 171 1 177 9.26e-78 230
Msa1298850 AT3G27650.1 79.091 110 23 0 5 114 33 142 1.03e-62 191
Msa1298850 AT1G65620.1 68.217 129 39 1 1 129 1 127 1.29e-52 167
Msa1298850 AT1G65620.4 68.217 129 39 1 1 129 1 127 1.29e-52 167
Msa1298850 AT1G65620.3 68.217 129 39 1 1 129 1 127 1.29e-52 167
Msa1298850 AT1G65620.5 68.217 129 39 1 1 129 1 127 1.29e-52 167
Msa1298850 AT1G65620.2 68.217 129 39 1 1 129 1 127 1.29e-52 167
Msa1298850 AT5G66870.1 61.538 143 44 3 1 142 1 133 2.20e-51 167
Msa1298850 AT2G30130.1 64.286 112 40 0 9 120 6 117 2.01e-49 159
Msa1298850 AT2G23660.2 62.931 116 43 0 9 124 3 118 2.04e-49 162
Msa1298850 AT2G23660.3 62.931 116 43 0 9 124 3 118 2.04e-49 162
Msa1298850 AT2G23660.1 62.931 116 43 0 9 124 3 118 2.04e-49 162
Msa1298850 AT1G31320.1 72.727 88 24 0 10 97 12 99 2.83e-44 145
Msa1298850 AT1G16530.1 59.829 117 45 2 10 124 13 129 1.09e-43 143
Msa1298850 AT1G07900.1 61.165 103 40 0 10 112 32 134 3.51e-43 143
Msa1298850 AT2G30340.1 60.952 105 41 0 10 114 51 155 1.29e-42 144
Msa1298850 AT2G30340.2 60.952 105 41 0 10 114 52 156 1.31e-42 144
Msa1298850 AT2G28500.1 58.879 107 44 0 10 116 54 160 1.95e-41 140
Msa1298850 AT3G11090.1 57.944 107 45 0 9 115 9 115 3.76e-41 137
Msa1298850 AT2G40470.2 63.810 105 38 0 10 114 19 123 1.01e-38 132
Msa1298850 AT2G40470.1 63.810 105 38 0 10 114 44 148 2.20e-38 132
Msa1298850 AT3G26660.1 55.000 100 45 0 12 111 6 105 6.96e-38 127
Msa1298850 AT3G26620.1 55.000 100 45 0 12 111 6 105 7.51e-38 127
Msa1298850 AT3G03760.1 56.731 104 44 1 10 112 50 153 1.79e-37 130
Msa1298850 AT4G00210.1 54.472 123 53 2 1 122 1 121 2.32e-37 129
Msa1298850 AT2G45420.1 63.043 92 33 1 14 104 40 131 1.34e-35 125
Msa1298850 AT4G00220.1 57.692 104 43 1 14 116 20 123 2.07e-35 124
Msa1298850 AT2G31310.1 38.503 187 84 5 10 170 6 187 5.76e-35 122
Msa1298850 AT2G42430.1 55.963 109 43 2 1 104 1 109 1.95e-34 122
Msa1298850 AT3G50510.1 45.902 122 64 1 10 129 11 132 7.59e-34 119
Msa1298850 AT3G50510.2 45.902 122 64 1 10 129 11 132 7.59e-34 119
Msa1298850 AT3G58190.1 57.292 96 40 1 11 105 11 106 9.98e-34 119
Msa1298850 AT2G45410.1 52.542 118 53 2 14 130 19 134 3.77e-33 117
Msa1298850 AT2G42440.1 54.639 97 43 1 10 105 6 102 6.87e-33 118
Msa1298850 AT5G06080.1 48.246 114 58 1 6 118 2 115 1.16e-32 115
Msa1298850 AT5G35900.1 49.000 100 51 0 12 111 6 105 2.18e-30 110
Msa1298850 AT3G13850.1 46.809 94 50 0 12 105 37 130 1.51e-28 107
Msa1298850 AT3G47870.1 41.748 103 60 0 12 114 37 139 3.05e-25 100
Msa1298850 AT1G72980.1 42.308 104 60 0 1 104 3 106 1.56e-23 93.2
Msa1298850 AT4G22700.1 40.541 111 64 2 12 121 6 115 1.60e-21 87.4
Msa1298850 AT1G06280.1 44.156 77 43 0 12 88 25 101 7.63e-18 78.2
Msa1298850 AT2G19820.1 34.694 98 63 1 2 98 3 100 3.03e-15 69.3
Msa1298850 AT5G15060.1 39.744 78 45 1 7 82 13 90 5.00e-15 68.9
Msa1298850 AT3G27940.3 38.806 67 41 0 10 76 4 70 1.03e-11 60.5
Msa1298850 AT3G27940.1 38.806 67 41 0 10 76 4 70 1.03e-11 60.5
Msa1298850 AT3G27940.2 38.806 67 41 0 10 76 4 70 1.03e-11 60.5

Find 55 sgRNAs with CRISPR-Local

Find 60 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCAAACGTACACAAAATATT+TGG 0.186655 8_3:-59747374 Msa1298850:CDS
CTAAACTGTCTTTGTGGAAT+TGG 0.275981 8_3:+59747083 None:intergenic
CGAGTTAGGGATCCAGTTTA+TGG 0.289758 8_3:-59747263 Msa1298850:CDS
AGAGAGGCTGGAGGAGGTGG+AGG 0.297872 8_3:+59747137 None:intergenic
ACGAAGCCGAAGCACGAGTT+AGG 0.305462 8_3:-59747277 Msa1298850:CDS
CTTTACCTTATTCTCTTCCT+TGG 0.333470 8_3:-59747010 Msa1298850:CDS
ATGAGTGAAGGTGGAGGAGG+AGG 0.339514 8_3:-59746966 Msa1298850:CDS
TCAGTCCAAGGAAGAGAATA+AGG 0.339719 8_3:+59747005 None:intergenic
AGTGAAGGTGGAGGAGGAGG+AGG 0.357862 8_3:-59746963 Msa1298850:CDS
GAAGGTGGAGGAGGAGGAGG+AGG 0.363314 8_3:-59746960 Msa1298850:CDS
AAAGAAGAATAAGTAGTAGT+AGG 0.401220 8_3:+59747029 None:intergenic
GCTCCTACACATCCATAAAC+TGG 0.405024 8_3:+59747251 None:intergenic
GAAAGAGAGGCTGGAGGAGG+TGG 0.409459 8_3:+59747134 None:intergenic
CTTCCACTAAACTGTCTTTG+TGG 0.427794 8_3:+59747077 None:intergenic
GGCTCTTCTGGAGGGAAGTA+AGG 0.432439 8_3:+59747407 None:intergenic
TGGAGGAGGTGGAGGGATAT+CGG 0.435988 8_3:+59747145 None:intergenic
AGTTAACTGCATCCTCCCTT+TGG 0.438074 8_3:+59747309 None:intergenic
GATATGAGTGAAGGTGGAGG+AGG 0.442790 8_3:-59746969 Msa1298850:CDS
ATTCCACAAAGACAGTTTAG+TGG 0.446210 8_3:-59747080 Msa1298850:CDS
TGGATCCCTAACTCGTGCTT+CGG 0.456667 8_3:+59747271 None:intergenic
CAGTTTAGTGGAAGAAATGA+AGG 0.473637 8_3:-59747068 Msa1298850:CDS
TGAGGCACAGAAAGAGAGGC+TGG 0.482119 8_3:+59747125 None:intergenic
ACTGTCTTTGTGGAATTGGT+TGG 0.483148 8_3:+59747087 None:intergenic
TTGAGGAGAAAATGCATGCC+AGG 0.496470 8_3:-59747443 Msa1298850:CDS
ACAAGTTCAAAGGCTTCAAA+AGG 0.500774 8_3:-59747210 Msa1298850:CDS
CTGCATCCTCCCTTTGGTGA+GGG 0.501198 8_3:+59747315 None:intergenic
GCCTCTCTTTCTGTGCCTCA+AGG 0.505853 8_3:-59747122 Msa1298850:CDS
CGAAGCCGAAGCACGAGTTA+GGG 0.512333 8_3:-59747276 Msa1298850:CDS
GAGAGGCTGGAGGAGGTGGA+GGG 0.516068 8_3:+59747138 None:intergenic
CATCCTCCCTTTGGTGAGGG+AGG 0.527585 8_3:+59747318 None:intergenic
TTCTACAAAGACAAGTTCAA+AGG 0.528529 8_3:-59747220 Msa1298850:CDS
GAGGTGGAGGGATATCGGTG+AGG 0.544709 8_3:+59747150 None:intergenic
AGGTGGAGGGATATCGGTGA+GGG 0.546572 8_3:+59747151 None:intergenic
GTGCTGCCTGCAAATTCTTG+AGG 0.549706 8_3:-59747460 Msa1298850:CDS
ACAGAAAGAGAGGCTGGAGG+AGG 0.555018 8_3:+59747131 None:intergenic
CGAACTCCTCCCTCACCAAA+GGG 0.555403 8_3:-59747324 Msa1298850:CDS
ACTGCATCCTCCCTTTGGTG+AGG 0.557366 8_3:+59747314 None:intergenic
TTGTCTTTGTAGAAAAGAGA+TGG 0.561057 8_3:+59747229 None:intergenic
GAGGGTATAGCGAAGAAGAT+CGG 0.563089 8_3:+59747169 None:intergenic
AAGAATTTGCAGGCAGCACA+AGG 0.573114 8_3:+59747464 None:intergenic
ACGAACTCCTCCCTCACCAA+AGG 0.580542 8_3:-59747325 Msa1298850:CDS
GATCCAGTTTATGGATGTGT+AGG 0.582057 8_3:-59747254 Msa1298850:CDS
TCCTTGAGGCACAGAAAGAG+AGG 0.595065 8_3:+59747121 None:intergenic
TCCTCAGTGGATATGAGTGA+AGG 0.615767 8_3:-59746978 Msa1298850:CDS
TAAGGTGCAAAGATGCAACC+TGG 0.617157 8_3:+59747425 None:intergenic
TCAGTGGATATGAGTGAAGG+TGG 0.618537 8_3:-59746975 Msa1298850:CDS
GTGGATATGAGTGAAGGTGG+AGG 0.633891 8_3:-59746972 Msa1298850:CDS
ACTGAGGAAGTATCAGTCCA+AGG 0.638918 8_3:+59746993 None:intergenic
TTGGACTGATACTTCCTCAG+TGG 0.639081 8_3:-59746991 Msa1298850:CDS
AGTTTAGTGGAAGAAATGAA+GGG 0.640159 8_3:-59747067 Msa1298850:CDS
ACAAGGTGAATTGTATGCGC+TGG 0.642277 8_3:+59747481 None:intergenic
TGGACTGATATCATTCCTTG+AGG 0.655168 8_3:+59747107 None:intergenic
ACTCCTCCCTCACCAAAGGG+AGG 0.660217 8_3:-59747321 Msa1298850:CDS
GGCACAGAAAGAGAGGCTGG+AGG 0.697106 8_3:+59747128 None:intergenic
ACCTTCACTCATATCCACTG+AGG 0.758906 8_3:+59746977 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
! AAAGAAGAATAAGTAGTAGT+AGG + chr8_3:59747415-59747434 None:intergenic 25.0%
! TGTACGTTTGCAAATTTTTG+AGG + chr8_3:59747058-59747077 None:intergenic 30.0%
GCAAACGTACACAAAATATT+TGG - chr8_3:59747067-59747086 Msa1298850:CDS 30.0%
TTGTCTTTGTAGAAAAGAGA+TGG + chr8_3:59747215-59747234 None:intergenic 30.0%
TTCTACAAAGACAAGTTCAA+AGG - chr8_3:59747221-59747240 Msa1298850:CDS 30.0%
AGTTTAGTGGAAGAAATGAA+GGG - chr8_3:59747374-59747393 Msa1298850:CDS 30.0%
! TTTTCTCCTCAAGAATTTGC+AGG + chr8_3:59746990-59747009 None:intergenic 35.0%
ACAAGTTCAAAGGCTTCAAA+AGG - chr8_3:59747231-59747250 Msa1298850:CDS 35.0%
CTAAACTGTCTTTGTGGAAT+TGG + chr8_3:59747361-59747380 None:intergenic 35.0%
ATTCCACAAAGACAGTTTAG+TGG - chr8_3:59747361-59747380 Msa1298850:CDS 35.0%
CAGTTTAGTGGAAGAAATGA+AGG - chr8_3:59747373-59747392 Msa1298850:CDS 35.0%
CTTTACCTTATTCTCTTCCT+TGG - chr8_3:59747431-59747450 Msa1298850:CDS 35.0%
!!! ATTTTTGAGGCTCTTCTGGA+GGG + chr8_3:59747045-59747064 None:intergenic 40.0%
!!! AATTTTTGAGGCTCTTCTGG+AGG + chr8_3:59747046-59747065 None:intergenic 40.0%
!!! GCAAATTTTTGAGGCTCTTC+TGG + chr8_3:59747049-59747068 None:intergenic 40.0%
GATCCAGTTTATGGATGTGT+AGG - chr8_3:59747187-59747206 Msa1298850:CDS 40.0%
TGGACTGATATCATTCCTTG+AGG + chr8_3:59747337-59747356 None:intergenic 40.0%
ACTGTCTTTGTGGAATTGGT+TGG + chr8_3:59747357-59747376 None:intergenic 40.0%
CTTCCACTAAACTGTCTTTG+TGG + chr8_3:59747367-59747386 None:intergenic 40.0%
TCAGTCCAAGGAAGAGAATA+AGG + chr8_3:59747439-59747458 None:intergenic 40.0%
ACAAGGTGAATTGTATGCGC+TGG + chr8_3:59746963-59746982 None:intergenic 45.0%
AAGAATTTGCAGGCAGCACA+AGG + chr8_3:59746980-59746999 None:intergenic 45.0%
TTGAGGAGAAAATGCATGCC+AGG - chr8_3:59746998-59747017 Msa1298850:CDS 45.0%
TAAGGTGCAAAGATGCAACC+TGG + chr8_3:59747019-59747038 None:intergenic 45.0%
AGTTAACTGCATCCTCCCTT+TGG + chr8_3:59747135-59747154 None:intergenic 45.0%
CGAGTTAGGGATCCAGTTTA+TGG - chr8_3:59747178-59747197 Msa1298850:CDS 45.0%
GCTCCTACACATCCATAAAC+TGG + chr8_3:59747193-59747212 None:intergenic 45.0%
! GAGGGTATAGCGAAGAAGAT+CGG + chr8_3:59747275-59747294 None:intergenic 45.0%
!! ACTGAGGAAGTATCAGTCCA+AGG + chr8_3:59747451-59747470 None:intergenic 45.0%
TTGGACTGATACTTCCTCAG+TGG - chr8_3:59747450-59747469 Msa1298850:CDS 45.0%
TCCTCAGTGGATATGAGTGA+AGG - chr8_3:59747463-59747482 Msa1298850:CDS 45.0%
ACCTTCACTCATATCCACTG+AGG + chr8_3:59747467-59747486 None:intergenic 45.0%
TCAGTGGATATGAGTGAAGG+TGG - chr8_3:59747466-59747485 Msa1298850:CDS 45.0%
GTGCTGCCTGCAAATTCTTG+AGG - chr8_3:59746981-59747000 Msa1298850:CDS 50.0%
TGGATCCCTAACTCGTGCTT+CGG + chr8_3:59747173-59747192 None:intergenic 50.0%
TCCTTGAGGCACAGAAAGAG+AGG + chr8_3:59747323-59747342 None:intergenic 50.0%
GTGGATATGAGTGAAGGTGG+AGG - chr8_3:59747469-59747488 Msa1298850:CDS 50.0%
GATATGAGTGAAGGTGGAGG+AGG - chr8_3:59747472-59747491 Msa1298850:CDS 50.0%
! GGCTCTTCTGGAGGGAAGTA+AGG + chr8_3:59747037-59747056 None:intergenic 55.0%
ACGAACTCCTCCCTCACCAA+AGG - chr8_3:59747116-59747135 Msa1298850:CDS 55.0%
CGAACTCCTCCCTCACCAAA+GGG - chr8_3:59747117-59747136 Msa1298850:CDS 55.0%
CTGCATCCTCCCTTTGGTGA+GGG + chr8_3:59747129-59747148 None:intergenic 55.0%
ACTGCATCCTCCCTTTGGTG+AGG + chr8_3:59747130-59747149 None:intergenic 55.0%
ACGAAGCCGAAGCACGAGTT+AGG - chr8_3:59747164-59747183 Msa1298850:CDS 55.0%
CGAAGCCGAAGCACGAGTTA+GGG - chr8_3:59747165-59747184 Msa1298850:CDS 55.0%
AGGTGGAGGGATATCGGTGA+GGG + chr8_3:59747293-59747312 None:intergenic 55.0%
TGGAGGAGGTGGAGGGATAT+CGG + chr8_3:59747299-59747318 None:intergenic 55.0%
ACAGAAAGAGAGGCTGGAGG+AGG + chr8_3:59747313-59747332 None:intergenic 55.0%
TGAGGCACAGAAAGAGAGGC+TGG + chr8_3:59747319-59747338 None:intergenic 55.0%
GCCTCTCTTTCTGTGCCTCA+AGG - chr8_3:59747319-59747338 Msa1298850:CDS 55.0%
ATGAGTGAAGGTGGAGGAGG+AGG - chr8_3:59747475-59747494 Msa1298850:CDS 55.0%
ACTCCTCCCTCACCAAAGGG+AGG - chr8_3:59747120-59747139 Msa1298850:CDS 60.0%
CATCCTCCCTTTGGTGAGGG+AGG + chr8_3:59747126-59747145 None:intergenic 60.0%
GAGGTGGAGGGATATCGGTG+AGG + chr8_3:59747294-59747313 None:intergenic 60.0%
GAAAGAGAGGCTGGAGGAGG+TGG + chr8_3:59747310-59747329 None:intergenic 60.0%
GGCACAGAAAGAGAGGCTGG+AGG + chr8_3:59747316-59747335 None:intergenic 60.0%
AGTGAAGGTGGAGGAGGAGG+AGG - chr8_3:59747478-59747497 Msa1298850:CDS 60.0%
GAGAGGCTGGAGGAGGTGGA+GGG + chr8_3:59747306-59747325 None:intergenic 65.0%
AGAGAGGCTGGAGGAGGTGG+AGG + chr8_3:59747307-59747326 None:intergenic 65.0%
GAAGGTGGAGGAGGAGGAGG+AGG - chr8_3:59747481-59747500 Msa1298850:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 59746947 59747516 59746947 ID=Msa1298850;Name=Msa1298850
chr8_3 mRNA 59746947 59747516 59746947 ID=Msa1298850-mRNA-1;Parent=Msa1298850;Name=Msa1298850-mRNA-1;_AED=0.23;_eAED=0.23;_QI=0|-1|0|1|-1|1|1|0|189
chr8_3 exon 59746947 59747516 59746947 ID=Msa1298850-mRNA-1:exon:17321;Parent=Msa1298850-mRNA-1
chr8_3 CDS 59746947 59747516 59746947 ID=Msa1298850-mRNA-1:cds;Parent=Msa1298850-mRNA-1
Gene Sequence

>Msa1298850

ATGGCATCATCATCCAGCGCATACAATTCACCTTGTGCTGCCTGCAAATTCTTGAGGAGAAAATGCATGCCAGGTTGCATCTTTGCACCTTACTTCCCTCCAGAAGAGCCTCAAAAATTTGCAAACGTACACAAAATATTTGGTGCTAGCAATGTCACAAAGCTTCTCAACGAACTCCTCCCTCACCAAAGGGAGGATGCAGTTAACTCACTTGCTTACGAAGCCGAAGCACGAGTTAGGGATCCAGTTTATGGATGTGTAGGAGCCATCTCTTTTCTACAAAGACAAGTTCAAAGGCTTCAAAAGGAACTCGAAGCTGCTAACACCGATCTTCTTCGCTATACCCTCACCGATATCCCTCCACCTCCTCCAGCCTCTCTTTCTGTGCCTCAAGGAATGATATCAGTCCAACCAATTCCACAAAGACAGTTTAGTGGAAGAAATGAAGGGCTTTATAGACAATCTCCTACTACTACTTATTCTTCTTTACCTTATTCTCTTCCTTGGACTGATACTTCCTCAGTGGATATGAGTGAAGGTGGAGGAGGAGGAGGAGGAAATCATATGTGA
Protein sequence

>Msa1298850

MASSSSAYNSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELEAANTDLLRYTLTDIPPPPPASLSVPQGMISVQPIPQRQFSGRNEGLYRQSPTTTYSSLPYSLPWTDTSSVDMSEGGGGGGGNHM*