AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1300260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1300260 MtrunA17_Chr4g0061791 96.735 490 13 2 1 488 1 489 0.0 972
Msa1300260 MtrunA17_Chr5g0420701 47.034 236 110 5 255 488 35 257 9.30e-59 197
Msa1300260 MtrunA17_Chr7g0220371 54.422 147 52 4 252 395 37 171 4.21e-38 142
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1300260 AT5G08130.5 47.059 510 204 20 1 488 1 466 3.14e-107 329
Msa1300260 AT5G08130.8 46.863 510 206 20 1 488 1 467 1.38e-106 328
Msa1300260 AT5G08130.7 47.047 508 203 20 1 488 1 462 1.60e-106 327
Msa1300260 AT5G08130.2 46.850 508 205 20 1 488 1 463 6.87e-106 326
Msa1300260 AT5G08130.4 46.850 508 205 20 1 488 1 463 6.87e-106 326
Msa1300260 AT5G08130.6 46.562 509 205 20 1 488 1 463 1.52e-104 322
Msa1300260 AT5G08130.3 46.966 379 154 13 119 488 2 342 1.14e-82 262
Msa1300260 AT5G08130.1 46.702 379 156 13 119 488 2 343 5.71e-82 260
Msa1300260 AT1G69010.1 41.132 265 118 10 226 486 8 238 1.27e-40 148
Msa1300260 AT5G38860.2 44.828 174 64 5 253 403 21 185 7.30e-34 127
Msa1300260 AT5G38860.1 37.549 253 106 9 253 481 21 245 2.22e-33 128

Find 203 sgRNAs with CRISPR-Local

Find 480 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTCTGTGATTGAAGATTT+TGG 0.130907 8_3:-61760549 Msa1300260:five_prime_UTR
TAAGAAGCAAATTGAAATTA+TGG 0.188070 8_3:+61753530 None:intergenic
GAAACCGTAATTCTCTTATT+AGG 0.205454 8_3:+61760331 None:intergenic
GAGCATTTGTGGATAGAAAT+TGG 0.227383 8_3:-61753786 Msa1300260:three_prime_UTR
AAGCTCTTGATTTGCGATTA+AGG 0.234916 8_3:-61760418 Msa1300260:five_prime_UTR
TTCTTCCTTGGCACTGGATT+TGG 0.254271 8_3:+61757945 None:intergenic
CACCTCTTACCTGGAGGAAT+TGG 0.255162 8_3:-61757853 Msa1300260:CDS
AACTCAACAGAGAAAGTTAA+AGG 0.261850 8_3:-61761065 Msa1300260:five_prime_UTR
TGGGTTGAAGTTAAGAAATT+TGG 0.265205 8_3:+61754105 None:intergenic
CTTCCTCAAGCACGTTCTTA+TGG 0.267366 8_3:-61760127 Msa1300260:CDS
ATAAATATTTCCACAATATA+TGG 0.267977 8_3:-61753392 Msa1300260:three_prime_UTR
AAATGATAAATGTTGTAATT+AGG 0.289965 8_3:-61753264 Msa1300260:three_prime_UTR
TTCTACTGAAGGTTGATAAT+TGG 0.293752 8_3:+61754017 None:intergenic
CACATTGGCATTGGTATGTT+TGG 0.295978 8_3:+61753068 None:intergenic
ATGAATTGTTTGAATGGAAC+AGG 0.302336 8_3:+61753435 None:intergenic
AGAATTTCGAGAAAAGAAAA+TGG 0.303491 8_3:+61753290 None:intergenic
CTCCACCTAAACCTCCGATT+TGG 0.310407 8_3:+61754085 None:intergenic
AAGTTGTGTTGGACATGATA+TGG 0.317695 8_3:-61753823 Msa1300260:three_prime_UTR
AAATTTGGTTGGGAAGAAAT+AGG 0.321463 8_3:+61754120 None:intergenic
ATTACGGTTTCTACTAAATT+CGG 0.322606 8_3:-61760319 Msa1300260:five_prime_UTR
TTGTAATTAGGATGCCAAAT+TGG 0.328639 8_3:-61753252 Msa1300260:three_prime_UTR
CTTAGTTTGTTGGGATCCTT+AGG 0.342893 8_3:-61752654 Msa1300260:three_prime_UTR
TGAATTTACCTCTAACAAAA+AGG 0.343203 8_3:+61754893 None:intergenic
ATCTTCCTTTGATTCTTAGA+AGG 0.344596 8_3:+61752896 None:intergenic
TGCGGCTTCTTCCTTGGCAC+TGG 0.352056 8_3:+61757939 None:intergenic
AACATTGCTGTTTGCTTCAA+AGG 0.352246 8_3:-61754277 Msa1300260:CDS
TCAACCCAAATCGGAGGTTT+AGG 0.354794 8_3:-61754090 Msa1300260:CDS
TCAAGCCAGATTCTACATTA+TGG 0.356652 8_3:+61754208 None:intergenic
TGATTTCTTGCGGCCATTAG+AGG 0.361614 8_3:-61757977 Msa1300260:CDS
ATGTAGTGTCTTAGTTTGTT+GGG 0.370568 8_3:-61752663 Msa1300260:three_prime_UTR
TTGGCTTCTACCTCCTCTAA+TGG 0.371622 8_3:+61757964 None:intergenic
CATGTAGTGTCTTAGTTTGT+TGG 0.372497 8_3:-61752664 Msa1300260:three_prime_UTR
ACACATGCCTTGCAGAGTTC+AGG 0.377988 8_3:-61753155 Msa1300260:three_prime_UTR
GGGGTATTTATTTCCTGTGC+TGG 0.378434 8_3:-61752719 Msa1300260:three_prime_UTR
TTTATCACAGGCTAGCATTT+CGG 0.379312 8_3:-61753126 Msa1300260:three_prime_UTR
GTTGGGGACAAACTCATTAT+AGG 0.380333 8_3:-61757619 Msa1300260:CDS
CGGATGATCTATTGTCTTCA+TGG 0.382464 8_3:+61754173 None:intergenic
TCAACCTAATAAGAGAATTA+CGG 0.385828 8_3:-61760335 Msa1300260:five_prime_UTR
TTCTGTTTGCAGCCTAAACT+TGG 0.389433 8_3:-61753630 Msa1300260:three_prime_UTR
TTCATCTGCGGCTTCTTCCT+TGG 0.391274 8_3:+61757933 None:intergenic
TCCACCTAAACCTCCGATTT+GGG 0.392555 8_3:+61754086 None:intergenic
GCAGATTCTGCTGCTAAGTT+AGG 0.392981 8_3:-61756385 Msa1300260:intron
CAATCACTCAATTATCATTA+CGG 0.400967 8_3:-61760853 Msa1300260:intron
ACAACTTCAAAATAGTATAA+AGG 0.408201 8_3:+61753839 None:intergenic
CATCCCCTAGTGAGCATTTG+TGG 0.408785 8_3:-61753797 Msa1300260:three_prime_UTR
AATCGCAAATCAAGAGCTTA+AGG 0.410435 8_3:+61760422 None:intergenic
CAAAGTAAATGTGCTATACT+TGG 0.413343 8_3:-61753198 Msa1300260:three_prime_UTR
GTACCTTGAGCAGATGGCCT+TGG 0.414119 8_3:+61759911 None:intergenic
TTCTTAACTTCAACCCAAAT+CGG 0.419263 8_3:-61754099 Msa1300260:CDS
TGTATAATGAATTGTTTGAA+TGG 0.421879 8_3:+61753429 None:intergenic
TGCAGCGAAAGATGAGGTCT+TGG 0.423397 8_3:+61761035 None:intergenic
TTGTTTACTTGACCTTTCCT+TGG 0.424889 8_3:-61752353 Msa1300260:three_prime_UTR
GTGAAAAGTGATGATGCTTC+TGG 0.427220 8_3:+61757769 None:intergenic
CAATCTCGTGGCGCAAATGG+TGG 0.441241 8_3:-61754315 Msa1300260:CDS
AATCTTGAAAAGTATCTCAT+AGG 0.441412 8_3:+61752375 None:intergenic
GAATATATAAATACATTAGT+AGG 0.441540 8_3:+61753699 None:intergenic
ACCTCTTACCTGGAGGAATT+GGG 0.442515 8_3:-61757852 Msa1300260:CDS
CTGGCTCGTTATTCCAACCT+TGG 0.443215 8_3:+61754743 None:intergenic
AGATGGCCTTGGATCTTGTT+CGG 0.448814 8_3:+61759922 None:intergenic
ATTTCGGTGCAAATTGAACT+TGG 0.449045 8_3:-61753110 Msa1300260:three_prime_UTR
CGCTCTGGCTCTAGAGTCAC+TGG 0.450006 8_3:-61752872 Msa1300260:three_prime_UTR
GGTATCCATAATGTAGAATC+TGG 0.451732 8_3:-61754213 Msa1300260:CDS
TCAGTTGAGCACCTCTTACC+TGG 0.452136 8_3:-61757862 Msa1300260:CDS
ATTACCTCTTTGAACATTCG+AGG 0.454838 8_3:+61756050 None:intergenic
ACAGGAAAGGAGAATAATGT+TGG 0.460228 8_3:-61757637 Msa1300260:CDS
CTAATGGCCGCAAGAAATCA+TGG 0.460307 8_3:+61757980 None:intergenic
ACTTGATATAATAGGACAAC+TGG 0.461416 8_3:-61756174 Msa1300260:intron
GGTTGGGAAGAAATAGGACT+TGG 0.461704 8_3:+61754126 None:intergenic
TTCAAGCGGTTTCACATTGT+GGG 0.462528 8_3:-61757686 Msa1300260:CDS
ATGAAGCTGGTGTTGCTAAA+GGG 0.464217 8_3:+61757884 None:intergenic
TCTATCCACAAATGCTCACT+AGG 0.466076 8_3:+61753792 None:intergenic
GCTGTAAATTAGTAAACTCT+TGG 0.466747 8_3:-61752528 Msa1300260:three_prime_UTR
GCTATACTTGGACAGGTTGT+TGG 0.468086 8_3:-61753186 Msa1300260:three_prime_UTR
GGATCAACCTAGCATGTTGT+TGG 0.470465 8_3:-61753371 Msa1300260:three_prime_UTR
ACCATCTCCCCAACAACTCA+TGG 0.472821 8_3:-61754237 Msa1300260:CDS
CTTCAAGCGGTTTCACATTG+TGG 0.473695 8_3:-61757687 Msa1300260:CDS
TGAAGTTAAGAAATTTGGTT+GGG 0.473775 8_3:+61754110 None:intergenic
TGATTATCGAACGACCTTTG+TGG 0.474042 8_3:-61760516 Msa1300260:five_prime_UTR
GATTATTTACAGGAGAACTA+AGG 0.474437 8_3:-61755584 Msa1300260:intron
TCCCAATTCCTCCAGGTAAG+AGG 0.482696 8_3:+61757851 None:intergenic
GAGATTAGAAAGGGAAAGAC+AGG 0.483551 8_3:-61757655 Msa1300260:CDS
AGTGAAGTAAGTCCAAGTTT+AGG 0.484101 8_3:+61753618 None:intergenic
GCTAATGGCACCTCCTTCAA+TGG 0.484672 8_3:+61753945 None:intergenic
CTAAATATATATAATTATAG+AGG 0.485547 8_3:-61752595 Msa1300260:three_prime_UTR
CAGGAAAGGAGAATAATGTT+GGG 0.486926 8_3:-61757636 Msa1300260:CDS
TTTGAAGCAAACAGCAATGT+TGG 0.487282 8_3:+61754279 None:intergenic
GGAAGAGTCTGAGATTAGAA+AGG 0.487727 8_3:-61757665 Msa1300260:CDS
CGAGATTGAAAACTTTCTGC+TGG 0.488725 8_3:+61754330 None:intergenic
TTTCAATCTCGTGGCGCAAA+TGG 0.497489 8_3:-61754318 Msa1300260:CDS
GAGAAAGAGCTCACCATTGA+AGG 0.497721 8_3:-61753958 Msa1300260:CDS
TCATCATTTCCATAAAACTC+TGG 0.498591 8_3:+61756142 None:intergenic
ATGAAGGTTCATTCCAAGGT+TGG 0.500331 8_3:-61754756 Msa1300260:CDS
GGAGATGTGGCAGGTGATTG+TGG 0.501550 8_3:-61753765 Msa1300260:three_prime_UTR
TGCTGGATTATTATCCTGCA+TGG 0.504277 8_3:-61752702 Msa1300260:three_prime_UTR
GTTAGGTCAGTGGACATTGA+AGG 0.508165 8_3:-61756368 Msa1300260:CDS
ACTCAACAGAGAAAGTTAAA+GGG 0.511879 8_3:-61761064 Msa1300260:five_prime_UTR
GCCTTGTTTGTTATTCCAGA+CGG 0.512631 8_3:+61754153 None:intergenic
TAAATGTGCTATACTTGGAC+AGG 0.513308 8_3:-61753193 Msa1300260:three_prime_UTR
GATGAAGCTGGTGTTGCTAA+AGG 0.513947 8_3:+61757883 None:intergenic
GCGTGAATAATAATAATCAA+AGG 0.514207 8_3:-61757801 Msa1300260:CDS
CCCATGAGTTGTTGGGGAGA+TGG 0.517548 8_3:+61754236 None:intergenic
CGTGAATAATAATAATCAAA+GGG 0.518006 8_3:-61757800 Msa1300260:intron
GAATTTCGAGAAAAGAAAAT+GGG 0.518677 8_3:+61753291 None:intergenic
ATGTAAACTATAACATAAAG+AGG 0.519364 8_3:+61753488 None:intergenic
TTGAAGTTAAGAAATTTGGT+TGG 0.519525 8_3:+61754109 None:intergenic
GCAGCGAAAGATGAGGTCTT+GGG 0.520455 8_3:+61761036 None:intergenic
GTACACACTTGATATGCTAA+TGG 0.523913 8_3:+61753930 None:intergenic
AAGACAATAGATCATCCGTC+TGG 0.528087 8_3:-61754168 Msa1300260:CDS
AATGCCAATGTGTGTTTCCA+AGG 0.530445 8_3:-61753057 Msa1300260:intron
TTGGAAACACACATTGGCAT+TGG 0.530708 8_3:+61753059 None:intergenic
TTCAGGAGTGGATTTATCAC+AGG 0.531531 8_3:-61753138 Msa1300260:three_prime_UTR
AATCAAAGGAAGATGCGCTC+TGG 0.532036 8_3:-61752887 Msa1300260:three_prime_UTR
TTTATTAGCTATCACAATGA+GGG 0.532937 8_3:+61752405 None:intergenic
TTCTCTGGTACGTAATTCAA+CGG 0.533332 8_3:+61760178 None:intergenic
TTCCACACAGTGATCAAAAG+AGG 0.537014 8_3:-61754926 Msa1300260:CDS
AAGATCCTTCTAAGAATCAA+AGG 0.539351 8_3:-61752901 Msa1300260:three_prime_UTR
CCATCTCCCCAACAACTCAT+GGG 0.540580 8_3:-61754236 Msa1300260:CDS
GAGAAGGTTCATAAGTATGA+AGG 0.541707 8_3:-61754772 Msa1300260:CDS
GAAGAAGCAAAATTAATGAC+AGG 0.542133 8_3:-61755485 Msa1300260:intron
GTGGACATCTATTCAGAGAA+AGG 0.545303 8_3:+61753594 None:intergenic
GATGAAGAGCTAGAAAATGA+AGG 0.546934 8_3:-61756096 Msa1300260:CDS
GCAAACAGCAATGTTGGAGA+TGG 0.547592 8_3:+61754285 None:intergenic
CTAGGTTGATCCATATATTG+TGG 0.548446 8_3:+61753382 None:intergenic
GAAGAGTCTGAGATTAGAAA+GGG 0.549063 8_3:-61757664 Msa1300260:CDS
GATTCTGTGAAATTTCTAGC+AGG 0.550131 8_3:-61760573 Msa1300260:five_prime_UTR
TCTCTTATTAGGTTGAAGAT+CGG 0.551105 8_3:+61760342 None:intergenic
AAGTATGAAGGTTCATTCCA+AGG 0.551145 8_3:-61754760 Msa1300260:CDS
AATCTCGTGGCGCAAATGGT+GGG 0.551190 8_3:-61754314 Msa1300260:CDS
TATACAGTACCTTGAGCAGA+TGG 0.553708 8_3:+61759905 None:intergenic
GGAAATGATGAAATCTGCAC+AGG 0.556382 8_3:-61756130 Msa1300260:CDS
TGCAGCTCACATACTTCAAG+CGG 0.558097 8_3:-61757700 Msa1300260:CDS
CTATCCACAAATGCTCACTA+GGG 0.558631 8_3:+61753793 None:intergenic
CAAAGCAGAGAAATAATGAC+AGG 0.558692 8_3:-61754353 Msa1300260:intron
AGCAACATGAATTGCACAAG+TGG 0.559497 8_3:+61753575 None:intergenic
GAACTAAGGGTGAGAGTGGA+CGG 0.560606 8_3:-61755570 Msa1300260:CDS
AATTGTTAGATGACTGTGGA+TGG 0.565285 8_3:+61753732 None:intergenic
AAATTATCTCTGAATTCTGA+AGG 0.565839 8_3:+61760259 None:intergenic
AGTTTACTAATTTACAGCAA+TGG 0.566532 8_3:+61752533 None:intergenic
ACCCAAATCGGAGGTTTAGG+TGG 0.566780 8_3:-61754087 Msa1300260:CDS
CTATAAGTCCCAATTCCTCC+AGG 0.567759 8_3:+61757844 None:intergenic
AGAAGCCAAATCCAGTGCCA+AGG 0.568313 8_3:-61757950 Msa1300260:CDS
AAAACAGCTTGTATCAGTAT+GGG 0.573845 8_3:+61752569 None:intergenic
TAAATAATGAGCTACGGAAG+AGG 0.574812 8_3:+61752438 None:intergenic
TCAAGACCCATGATTTCTTG+CGG 0.575342 8_3:-61757987 Msa1300260:CDS
ATTATTTACAGGAGAACTAA+GGG 0.578041 8_3:-61755583 Msa1300260:intron
ATAGTCTGAGATTCTACTGA+AGG 0.581921 8_3:+61754006 None:intergenic
AGGCTATAAATAATGAGCTA+CGG 0.582243 8_3:+61752432 None:intergenic
TGCCTTGCAGAGTTCAGGAG+TGG 0.584050 8_3:-61753150 Msa1300260:three_prime_UTR
ACAGTCAATCTCATCCATGC+AGG 0.585678 8_3:+61752688 None:intergenic
GCATTGGTATGTTTGGTCTG+AGG 0.586918 8_3:+61753075 None:intergenic
AATAGAAGCAATCCAAGGAA+AGG 0.589019 8_3:+61752341 None:intergenic
ATCTGCACAGGATTGTGCCC+AGG 0.592606 8_3:-61756118 Msa1300260:CDS
GCACGTTCTTATGGAGCCGA+AGG 0.594158 8_3:-61760118 Msa1300260:intron
GCAGGATAATAATCCAGCAC+AGG 0.595198 8_3:+61752706 None:intergenic
CACCGATGAGATTTCATCTG+CGG 0.595776 8_3:+61757921 None:intergenic
TTGATTATTATTATTCACGC+AGG 0.597539 8_3:+61757804 None:intergenic
TAAGGAAAGAATGAATGTAA+CGG 0.598378 8_3:+61752792 None:intergenic
ATCCACTCCTGAACTCTGCA+AGG 0.600178 8_3:+61753148 None:intergenic
GCAAGAAATCATGGGTCTTG+AGG 0.600334 8_3:+61757989 None:intergenic
AGGTGCTCAACTGATGAAGC+TGG 0.601853 8_3:+61757871 None:intergenic
AGGAGAACTAAGGGTGAGAG+TGG 0.602089 8_3:-61755574 Msa1300260:CDS
ATTGAATTGTTAGATGACTG+TGG 0.605394 8_3:+61753728 None:intergenic
TTAACTTCAACCCAAATCGG+AGG 0.605590 8_3:-61754096 Msa1300260:CDS
TAATGGCCGCAAGAAATCAT+GGG 0.606284 8_3:+61757981 None:intergenic
TGAAGCTGGTGTTGCTAAAG+GGG 0.607506 8_3:+61757885 None:intergenic
TGAAGTATGTGAGCTGCAGT+TGG 0.607956 8_3:+61757705 None:intergenic
TATTCACGCAGGAATTAATG+TGG 0.608444 8_3:+61757815 None:intergenic
TAGAAAGGGAAAGACAGGAA+AGG 0.608538 8_3:-61757650 Msa1300260:CDS
GCTCCATAAGAACGTGCTTG+AGG 0.609314 8_3:+61760124 None:intergenic
GATCCAAGGCCATCTGCTCA+AGG 0.611922 8_3:-61759914 Msa1300260:intron
GTGGATAGAAATTGGAGATG+TGG 0.617637 8_3:-61753778 Msa1300260:three_prime_UTR
ATAGAAATTGGAGATGTGGC+AGG 0.617759 8_3:-61753774 Msa1300260:three_prime_UTR
ATATCAAGTGTGTACTCACA+AGG 0.619435 8_3:-61753922 Msa1300260:CDS
TGAATTGTTTGAATGGAACA+GGG 0.619907 8_3:+61753436 None:intergenic
CGCAGATGAAATCTCATCGG+TGG 0.622602 8_3:-61757920 Msa1300260:CDS
AAAGAGCTCACCATTGAAGG+AGG 0.629369 8_3:-61753955 Msa1300260:CDS
CAACTGCCGAACAAGATCCA+AGG 0.629883 8_3:-61759928 Msa1300260:CDS
GGGGACAAACTCATTATAGG+AGG 0.631737 8_3:-61757616 Msa1300260:intron
AGCCGCAGATGAAATCTCAT+CGG 0.632596 8_3:-61757923 Msa1300260:CDS
TATACCTTGGAAACACACAT+TGG 0.634078 8_3:+61753053 None:intergenic
TTTCTTGCGGCCATTAGAGG+AGG 0.635490 8_3:-61757974 Msa1300260:CDS
CATCTCCCCAACAACTCATG+GGG 0.638824 8_3:-61754235 Msa1300260:CDS
TCTGTGCGGAAACAGAAGCA+GGG 0.640445 8_3:-61759991 Msa1300260:intron
TCCACACAGTGATCAAAAGA+GGG 0.643944 8_3:-61754925 Msa1300260:CDS
GCTATCACAATGAGGGTGTG+AGG 0.644440 8_3:+61752412 None:intergenic
ACAGCTTGTATCAGTATGGG+AGG 0.645446 8_3:+61752572 None:intergenic
GAATCCTCGAATGTTCAAAG+AGG 0.645829 8_3:-61756054 Msa1300260:intron
ATCTGGCTTGAGCACAACAA+CGG 0.650337 8_3:-61754196 Msa1300260:CDS
TTAGCAATTGACTTCCACAA+AGG 0.655989 8_3:+61760502 None:intergenic
GAATTAATAGAAGCAATCCA+AGG 0.657987 8_3:+61752336 None:intergenic
GAGCACTGCAGCGAAAGATG+AGG 0.658597 8_3:+61761029 None:intergenic
CGAAAGATGAGGTCTTGGGT+CGG 0.660416 8_3:+61761040 None:intergenic
TATATATTCACCCAGCCATG+AGG 0.661374 8_3:-61753685 Msa1300260:three_prime_UTR
CTGCTGCTAAGTTAGGTCAG+TGG 0.667387 8_3:-61756378 Msa1300260:CDS
AGGAAAGGAGAATAATGTTG+GGG 0.670249 8_3:-61757635 Msa1300260:CDS
TATCCACAAATGCTCACTAG+GGG 0.675975 8_3:+61753794 None:intergenic
TCCGTCTGGAATAACAAACA+AGG 0.684989 8_3:-61754154 Msa1300260:CDS
TATCAAGTGTGTACTCACAA+GGG 0.699426 8_3:-61753921 Msa1300260:CDS
TGTGCATCAAGCAACTAGTG+CGG 0.714634 8_3:-61757746 Msa1300260:CDS
GTTGAGCACCTCTTACCTGG+AGG 0.717651 8_3:-61757859 Msa1300260:CDS
ATCTCCCCAACAACTCATGG+GGG 0.722606 8_3:-61754234 Msa1300260:CDS
GAAGCTGGTGTTGCTAAAGG+GGG 0.738031 8_3:+61757886 None:intergenic
GTGCGGAAACAGAAGCAGGG+AGG 0.748077 8_3:-61759988 Msa1300260:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATATTCTATGAATAAATA+TGG - chr8_3:61754702-61754721 Msa1300260:intron 10.0%
!!! ATGTATTATTAATTAATTTG+AGG + chr8_3:61754751-61754770 None:intergenic 10.0%
!!! TAAAATAAAAAACTATTTTC+AGG + chr8_3:61755158-61755177 None:intergenic 10.0%
!!! TTTTGTTTTCAAAATTATTT+CGG - chr8_3:61755376-61755395 Msa1300260:intron 10.0%
!!! GATAATAAATAATTTTCATT+TGG + chr8_3:61756226-61756245 None:intergenic 10.0%
!!! GGATAATTTTTTAAAATAAT+GGG + chr8_3:61756645-61756664 None:intergenic 10.0%
!!! TGGATAATTTTTTAAAATAA+TGG + chr8_3:61756646-61756665 None:intergenic 10.0%
!! AAAATAAGATAAATAATTAC+AGG + chr8_3:61756675-61756694 None:intergenic 10.0%
!! AAAGGAAAAAAAAAAAAAAA+AGG - chr8_3:61758252-61758271 Msa1300260:intron 10.0%
!!! TAATTTTTATCAATTATTTG+GGG - chr8_3:61760698-61760717 Msa1300260:intron 10.0%
!!! TTTTAAAATTAATTTTTGGA+AGG - chr8_3:61760726-61760745 Msa1300260:intron 10.0%
!!! TTTAAAATTAATTTTTGGAA+GGG - chr8_3:61760727-61760746 Msa1300260:intron 10.0%
!! CTAAATATATATAATTATAG+AGG - chr8_3:61760871-61760890 Msa1300260:five_prime_UTR 10.0%
!!! TATTTTTTTAACATTGATTT+TGG - chr8_3:61760977-61760996 Msa1300260:five_prime_UTR 10.0%
!! TGATTTGAATTAATATTGTT+TGG - chr8_3:61753432-61753451 Msa1300260:three_prime_UTR 15.0%
!! TATTATTATGCAAAATGATT+CGG - chr8_3:61753605-61753624 Msa1300260:three_prime_UTR 15.0%
!! TTATTTACAGTTGAATTATT+TGG + chr8_3:61753743-61753762 None:intergenic 15.0%
!! TTAATTAACAAAATTTCCTA+TGG - chr8_3:61753871-61753890 Msa1300260:three_prime_UTR 15.0%
!! TATTACTATATTCTTTCATA+TGG - chr8_3:61754509-61754528 Msa1300260:intron 15.0%
!! TAGCTATTATTAGTTAATAA+TGG + chr8_3:61754684-61754703 None:intergenic 15.0%
!! TATTTAAATGGAGAATAATA+AGG - chr8_3:61755954-61755973 Msa1300260:intron 15.0%
!! TTTACTTTAAATATACTTCT+AGG + chr8_3:61756401-61756420 None:intergenic 15.0%
!!! TATTCTTAACATTTTTTACT+CGG - chr8_3:61757210-61757229 Msa1300260:intron 15.0%
!!! ATTATTTACTGATTATTTAC+AGG - chr8_3:61757872-61757891 Msa1300260:CDS 15.0%
!! TTTATTAGATTTATGGTTTA+TGG - chr8_3:61758329-61758348 Msa1300260:intron 15.0%
!! TTATTAGATTTATGGTTTAT+GGG - chr8_3:61758330-61758349 Msa1300260:intron 15.0%
!! GTTTAATCTAAATTATTTGT+AGG - chr8_3:61758645-61758664 Msa1300260:intron 15.0%
!! TCATGTTTATAAAGAAATAA+AGG + chr8_3:61758926-61758945 None:intergenic 15.0%
!! AATTTAAATCCATTAACAAT+AGG + chr8_3:61759050-61759069 None:intergenic 15.0%
!! GAATATATAAATACATTAGT+AGG + chr8_3:61759770-61759789 None:intergenic 15.0%
!! ATAAATATTTCCACAATATA+TGG - chr8_3:61760074-61760093 Msa1300260:intron 15.0%
!! AAATGATAAATGTTGTAATT+AGG - chr8_3:61760202-61760221 Msa1300260:five_prime_UTR 15.0%
!! TATAAAAAGACTTTACAAAA+GGG + chr8_3:61760452-61760471 None:intergenic 15.0%
!! TTATAAAAAGACTTTACAAA+AGG + chr8_3:61760453-61760472 None:intergenic 15.0%
!! ACAAATTAGATAATAATACA+TGG + chr8_3:61760521-61760540 None:intergenic 15.0%
!!! TTAAAATTAATTTTTGGAAG+GGG - chr8_3:61760728-61760747 Msa1300260:intron 15.0%
!!! TTCAATTTTTTGTTTCTTAG+TGG - chr8_3:61752651-61752670 Msa1300260:three_prime_UTR 20.0%
!! AATAAAATCATAACTACCTT+CGG + chr8_3:61753367-61753386 None:intergenic 20.0%
!! TCTCTTATAAAATCTTAATC+TGG + chr8_3:61754120-61754139 None:intergenic 20.0%
!!! GAATTCAAATTTTCTTTGTA+AGG + chr8_3:61754273-61754292 None:intergenic 20.0%
!! AATTTCTTTCAATTTAACCA+AGG + chr8_3:61754299-61754318 None:intergenic 20.0%
!! CAAGATCTTTATATTCTTTA+AGG + chr8_3:61754454-61754473 None:intergenic 20.0%
!! CTTAAAGAATATAAAGATCT+TGG - chr8_3:61754452-61754471 Msa1300260:intron 20.0%
!! ATATAGTAATACCATTATAC+TGG + chr8_3:61754500-61754519 None:intergenic 20.0%
!! TTAAAACAATCGAAAGTTAA+TGG + chr8_3:61754536-61754555 None:intergenic 20.0%
!!! TAGTTAATAATGGAAAAATG+AGG + chr8_3:61754674-61754693 None:intergenic 20.0%
!!! AGTTTTCAAAACTATTTCTT+AGG + chr8_3:61755198-61755217 None:intergenic 20.0%
!!! TAAGAAATAGTTTTGAAAAC+TGG - chr8_3:61755197-61755216 Msa1300260:intron 20.0%
!!! TTTTCATTTTCGGTTAAATA+CGG + chr8_3:61755301-61755320 None:intergenic 20.0%
!!! ATACATATCGTTTTCATTTT+CGG + chr8_3:61755311-61755330 None:intergenic 20.0%
!! AAATTATTTCGGTTAATTGA+AGG - chr8_3:61755387-61755406 Msa1300260:intron 20.0%
!! CGTGAATAATAATAATCAAA+GGG - chr8_3:61755666-61755685 Msa1300260:intron 20.0%
!! CATCTTCAAAAATTATTTCA+TGG + chr8_3:61755879-61755898 None:intergenic 20.0%
!! AGCAAGAAGAATTATTTAAA+TGG - chr8_3:61755942-61755961 Msa1300260:intron 20.0%
!!! AATTAAAGTGTTAGTATCTT+GGG + chr8_3:61756094-61756113 None:intergenic 20.0%
!!! AAATTAAAGTGTTAGTATCT+TGG + chr8_3:61756095-61756114 None:intergenic 20.0%
!! AATAGAGATAGAAAATGTTT+AGG - chr8_3:61756311-61756330 Msa1300260:CDS 20.0%
!! ATAGAGATAGAAAATGTTTA+GGG - chr8_3:61756312-61756331 Msa1300260:CDS 20.0%
!! ATGAAAATAACTGATTGAAA+GGG - chr8_3:61756583-61756602 Msa1300260:intron 20.0%
!! TAAATAATTACAGGTATGAT+TGG + chr8_3:61756666-61756685 None:intergenic 20.0%
!! CAAACATAAACAACTAAAAT+TGG + chr8_3:61756716-61756735 None:intergenic 20.0%
!!! ATTTGTTCCAATTATTTTCT+CGG - chr8_3:61756873-61756892 Msa1300260:intron 20.0%
!! AATTACATAACCATCTTAAA+AGG + chr8_3:61757244-61757263 None:intergenic 20.0%
!! AATTTGGCAACTATAATTAA+AGG + chr8_3:61757647-61757666 None:intergenic 20.0%
!!! AGTTTCATTCTTTTTTAGAA+AGG - chr8_3:61758234-61758253 Msa1300260:intron 20.0%
!! ACAACTTCAAAATAGTATAA+AGG + chr8_3:61759630-61759649 None:intergenic 20.0%
!! TAAGAAGCAAATTGAAATTA+TGG + chr8_3:61759939-61759958 None:intergenic 20.0%
!! ATGTAAACTATAACATAAAG+AGG + chr8_3:61759981-61760000 None:intergenic 20.0%
!! TGTATAATGAATTGTTTGAA+TGG + chr8_3:61760040-61760059 None:intergenic 20.0%
!!! ATGATGCATATTATTTTGTT+GGG + chr8_3:61760843-61760862 None:intergenic 20.0%
!!! AATGATGCATATTATTTTGT+TGG + chr8_3:61760844-61760863 None:intergenic 20.0%
!!! TTTTTTAACATTGATTTTGG+TGG - chr8_3:61760980-61760999 Msa1300260:five_prime_UTR 20.0%
! CAATCACTCAATTATCATTA+CGG - chr8_3:61752613-61752632 Msa1300260:three_prime_UTR 25.0%
! AAACTCGAATTAGCATAATT+CGG + chr8_3:61752779-61752798 None:intergenic 25.0%
! TCAACCTAATAAGAGAATTA+CGG - chr8_3:61753131-61753150 Msa1300260:three_prime_UTR 25.0%
! ATTACGGTTTCTACTAAATT+CGG - chr8_3:61753147-61753166 Msa1300260:three_prime_UTR 25.0%
! AAATTATCTCTGAATTCTGA+AGG + chr8_3:61753210-61753229 None:intergenic 25.0%
!!! TTCAACGGAATTTTGAAATT+CGG + chr8_3:61753276-61753295 None:intergenic 25.0%
!!! AATTGAGATTCAAGTTTTGA+TGG - chr8_3:61753314-61753333 Msa1300260:three_prime_UTR 25.0%
! GTAGTATAAATTCTACATCA+CGG - chr8_3:61753706-61753725 Msa1300260:three_prime_UTR 25.0%
! ATTAACAAAATTTCCTATGG+TGG - chr8_3:61753874-61753893 Msa1300260:three_prime_UTR 25.0%
! GAAAATTTGAATTCAAACCT+TGG - chr8_3:61754279-61754298 Msa1300260:CDS 25.0%
!!! TTTACCACTTTTTGCATTTT+AGG - chr8_3:61754379-61754398 Msa1300260:intron 25.0%
! ATTTCCTAAAATGCAAAAAG+TGG + chr8_3:61754386-61754405 None:intergenic 25.0%
!!! AGATCTTGGTGTTTTAATTT+TGG - chr8_3:61754466-61754485 Msa1300260:intron 25.0%
!!! GATCTTGGTGTTTTAATTTT+GGG - chr8_3:61754467-61754486 Msa1300260:intron 25.0%
! GTTATAACAAACATGATTTG+AGG - chr8_3:61754807-61754826 Msa1300260:intron 25.0%
! TTGATTATTATTATTCACGC+AGG + chr8_3:61755665-61755684 None:intergenic 25.0%
! GCGTGAATAATAATAATCAA+AGG - chr8_3:61755665-61755684 Msa1300260:intron 25.0%
!! ATGTTTAAAGCATAAAGTGT+AGG + chr8_3:61756002-61756021 None:intergenic 25.0%
!! ATTAAAGTGTTAGTATCTTG+GGG + chr8_3:61756093-61756112 None:intergenic 25.0%
! ATGAAATCATAAGAAAATGC+AGG + chr8_3:61756347-61756366 None:intergenic 25.0%
! CATGAAAATAACTGATTGAA+AGG - chr8_3:61756582-61756601 Msa1300260:intron 25.0%
! ATAAACAACTAAAATTGGCA+AGG + chr8_3:61756711-61756730 None:intergenic 25.0%
!! CGTTAATTAGTTAGATTTTG+AGG - chr8_3:61756966-61756985 Msa1300260:intron 25.0%
!! CTTTTTGCACTTGATATAAT+AGG - chr8_3:61757284-61757303 Msa1300260:intron 25.0%
!!! ATCATTTTAACTTTGTGATG+AGG - chr8_3:61757594-61757613 Msa1300260:intron 25.0%
!!! TCATTTTAACTTTGTGATGA+GGG - chr8_3:61757595-61757614 Msa1300260:intron 25.0%
!!! GTGGTTTTAATATTATGTCT+CGG - chr8_3:61757748-61757767 Msa1300260:CDS 25.0%
! ATTATTTACAGGAGAACTAA+GGG - chr8_3:61757883-61757902 Msa1300260:CDS 25.0%
! AATTCTATCACCATATTAGT+AGG + chr8_3:61758016-61758035 None:intergenic 25.0%
! GCAGTTCATAATTAAGAAAA+GGG + chr8_3:61758095-61758114 None:intergenic 25.0%
! TGCAGTTCATAATTAAGAAA+AGG + chr8_3:61758096-61758115 None:intergenic 25.0%
!!! TTTCCTAAAAGCCATTTTTA+GGG + chr8_3:61758282-61758301 None:intergenic 25.0%
!!! TTTTCCTAAAAGCCATTTTT+AGG + chr8_3:61758283-61758302 None:intergenic 25.0%
! TAACAATGATTCCAATTAAG+TGG - chr8_3:61758304-61758323 Msa1300260:intron 25.0%
! TCTAATAAAGTCCACTTAAT+TGG + chr8_3:61758318-61758337 None:intergenic 25.0%
!! AGTGGACTTTATTAGATTTA+TGG - chr8_3:61758322-61758341 Msa1300260:intron 25.0%
! CAAATAAAATCAGGTAATGA+TGG + chr8_3:61758457-61758476 None:intergenic 25.0%
! GATTATGAGCAAATAAAATC+AGG + chr8_3:61758466-61758485 None:intergenic 25.0%
! AACATTTGAATCAAACATGT+AGG - chr8_3:61758495-61758514 Msa1300260:intron 25.0%
! TGAATTTACCTCTAACAAAA+AGG + chr8_3:61758576-61758595 None:intergenic 25.0%
! TTGTTAGAGGTAAATTCATA+CGG - chr8_3:61758578-61758597 Msa1300260:intron 25.0%
! CAAAATAATAGCTTCATTGA+TGG - chr8_3:61758810-61758829 Msa1300260:intron 25.0%
! TTCTTTATAAACATGATCAG+AGG - chr8_3:61758930-61758949 Msa1300260:intron 25.0%
! TCTTTATAAACATGATCAGA+GGG - chr8_3:61758931-61758950 Msa1300260:intron 25.0%
!! GAAAAATGTGAATCAGTTTT+TGG + chr8_3:61759089-61759108 None:intergenic 25.0%
! TGAAGTTAAGAAATTTGGTT+GGG + chr8_3:61759359-61759378 None:intergenic 25.0%
! TTGAAGTTAAGAAATTTGGT+TGG + chr8_3:61759360-61759379 None:intergenic 25.0%
!!! ATACTATTTTGAAGTTGTGT+TGG - chr8_3:61759632-61759651 Msa1300260:intron 25.0%
!!! AAACAGTTTTTTAATCCTCA+TGG + chr8_3:61759799-61759818 None:intergenic 25.0%
! GAATTTCGAGAAAAGAAAAT+GGG + chr8_3:61760178-61760197 None:intergenic 25.0%
! AGAATTTCGAGAAAAGAAAA+TGG + chr8_3:61760179-61760198 None:intergenic 25.0%
! AATGCTAACAAAAACCAATT+TGG + chr8_3:61760231-61760250 None:intergenic 25.0%
! TAATACATGGTTTCATAATG+TGG + chr8_3:61760508-61760527 None:intergenic 25.0%
! TAAGGAAAGAATGAATGTAA+CGG + chr8_3:61760677-61760696 None:intergenic 25.0%
!!! TGATGCATATTATTTTGTTG+GGG + chr8_3:61760842-61760861 None:intergenic 25.0%
! AGTTTACTAATTTACAGCAA+TGG + chr8_3:61760936-61760955 None:intergenic 25.0%
! TTTATTAGCTATCACAATGA+GGG + chr8_3:61761064-61761083 None:intergenic 25.0%
!! TTTTATTAGCTATCACAATG+AGG + chr8_3:61761065-61761084 None:intergenic 25.0%
!!! AATCTTGAAAAGTATCTCAT+AGG + chr8_3:61761094-61761113 None:intergenic 25.0%
AACTCAACAGAGAAAGTTAA+AGG - chr8_3:61752401-61752420 Msa1300260:three_prime_UTR 30.0%
ACTCAACAGAGAAAGTTAAA+GGG - chr8_3:61752402-61752421 Msa1300260:three_prime_UTR 30.0%
AGTGATTATAAGAAAAAGCG+CGG - chr8_3:61752495-61752514 Msa1300260:three_prime_UTR 30.0%
!! TCTCTTATTAGGTTGAAGAT+CGG + chr8_3:61753127-61753146 None:intergenic 30.0%
GAAACCGTAATTCTCTTATT+AGG + chr8_3:61753138-61753157 None:intergenic 30.0%
! TGAATCTCAATTTTCTTCTC+TGG + chr8_3:61753306-61753325 None:intergenic 30.0%
!!! TTTTCTGAAACTTTTCTGTG+CGG - chr8_3:61753461-61753480 Msa1300260:three_prime_UTR 30.0%
TCTATTTAATCACAGGATCT+GGG - chr8_3:61753800-61753819 Msa1300260:three_prime_UTR 30.0%
CCATTTGATGTTAAATCCTT+CGG + chr8_3:61753903-61753922 None:intergenic 30.0%
AACTACAAGTCCATCAAAAT+GGG + chr8_3:61753992-61754011 None:intergenic 30.0%
! TTGATTTGACATTTCACATC+AGG - chr8_3:61754010-61754029 Msa1300260:CDS 30.0%
AATGAGGAGAATGAAAAAAG+TGG + chr8_3:61754658-61754677 None:intergenic 30.0%
TGACATGTAAGTGCATTAAA+TGG + chr8_3:61755250-61755269 None:intergenic 30.0%
GATTTGTGCTCAAATTCTAT+GGG + chr8_3:61756025-61756044 None:intergenic 30.0%
! TGATTTGTGCTCAAATTCTA+TGG + chr8_3:61756026-61756045 None:intergenic 30.0%
ACTAACCCTTGAAAAACATA+AGG - chr8_3:61756184-61756203 Msa1300260:intron 30.0%
!! TCATTTGGTTTGCTATTATC+CGG + chr8_3:61756211-61756230 None:intergenic 30.0%
ATGATTTCATATAACGTGCA+TGG - chr8_3:61756357-61756376 Msa1300260:CDS 30.0%
!!! ACGGTTTTTTGGGTATTATT+AGG + chr8_3:61756474-61756493 None:intergenic 30.0%
!!! AGTAAAAGCTACGGTTTTTT+GGG + chr8_3:61756484-61756503 None:intergenic 30.0%
!!! TAGTAAAAGCTACGGTTTTT+TGG + chr8_3:61756485-61756504 None:intergenic 30.0%
!!! TTAGTTTTTTCTTTCGCCAA+TGG - chr8_3:61756538-61756557 Msa1300260:intron 30.0%
GGATGAAAGTCATCTTAATT+CGG - chr8_3:61756781-61756800 Msa1300260:intron 30.0%
CAATTGTATAGTATTTGCGA+CGG - chr8_3:61757028-61757047 Msa1300260:intron 30.0%
! TCGTTTTCTAACAATCATCA+TGG - chr8_3:61757135-61757154 Msa1300260:intron 30.0%
!! GGAATAGTTTCCTTTTAAGA+TGG - chr8_3:61757231-61757250 Msa1300260:intron 30.0%
ACTTGATATAATAGGACAAC+TGG - chr8_3:61757292-61757311 Msa1300260:intron 30.0%
TCATCATTTCCATAAAACTC+TGG + chr8_3:61757327-61757346 None:intergenic 30.0%
TAATATCTCCTTGTTGAGAA+AGG - chr8_3:61757442-61757461 Msa1300260:intron 30.0%
TTAGTCAGATCAATGAAAAG+GGG + chr8_3:61757714-61757733 None:intergenic 30.0%
GTTAGTCAGATCAATGAAAA+GGG + chr8_3:61757715-61757734 None:intergenic 30.0%
AGTTAGTCAGATCAATGAAA+AGG + chr8_3:61757716-61757735 None:intergenic 30.0%
! ACTAACTAGTGTTTTGTAAG+TGG - chr8_3:61757729-61757748 Msa1300260:CDS 30.0%
TTTGAGTATATAACTCGTTG+TGG + chr8_3:61757790-61757809 None:intergenic 30.0%
ACAACGAGTTATATACTCAA+AGG - chr8_3:61757789-61757808 Msa1300260:intron 30.0%
CAACGAGTTATATACTCAAA+GGG - chr8_3:61757790-61757809 Msa1300260:intron 30.0%
! TTGTTCGAAAAGATTTTACG+AGG - chr8_3:61757836-61757855 Msa1300260:CDS 30.0%
GATTATTTACAGGAGAACTA+AGG - chr8_3:61757882-61757901 Msa1300260:CDS 30.0%
GAAGAAGCAAAATTAATGAC+AGG - chr8_3:61757981-61758000 Msa1300260:CDS 30.0%
!! GTTAGTCTTACCTACTAATA+TGG - chr8_3:61758003-61758022 Msa1300260:intron 30.0%
! AAAAAGGTGTACCCTAAAAA+TGG - chr8_3:61758268-61758287 Msa1300260:intron 30.0%
!!! CATTCACTTTTTACAAGAGA+AGG - chr8_3:61758678-61758697 Msa1300260:intron 30.0%
AATCTTTCACAGCTTAAGAT+AGG + chr8_3:61758782-61758801 None:intergenic 30.0%
TTTCTCATAAAATGATCTGG+AGG + chr8_3:61758853-61758872 None:intergenic 30.0%
ACGTTTCTCATAAAATGATC+TGG + chr8_3:61758856-61758875 None:intergenic 30.0%
CAATCAAAACTATTAGGTCT+AGG + chr8_3:61758897-61758916 None:intergenic 30.0%
!!! ACCTAATAGTTTTGATTGTC+TGG - chr8_3:61758899-61758918 Msa1300260:intron 30.0%
ACCAGACAATCAAAACTATT+AGG + chr8_3:61758903-61758922 None:intergenic 30.0%
ATCACATAGCCTATTGTTAA+TGG - chr8_3:61759038-61759057 Msa1300260:intron 30.0%
!! AATGTGAATCAGTTTTTGGA+TGG + chr8_3:61759085-61759104 None:intergenic 30.0%
AAATTTGGTTGGGAAGAAAT+AGG + chr8_3:61759349-61759368 None:intergenic 30.0%
! TGGGTTGAAGTTAAGAAATT+TGG + chr8_3:61759364-61759383 None:intergenic 30.0%
TTCTTAACTTCAACCCAAAT+CGG - chr8_3:61759367-61759386 Msa1300260:intron 30.0%
!! TTCTACTGAAGGTTGATAAT+TGG + chr8_3:61759452-61759471 None:intergenic 30.0%
ATTGAATTGTTAGATGACTG+TGG + chr8_3:61759741-61759760 None:intergenic 30.0%
TGAATTGTTTGAATGGAACA+GGG + chr8_3:61760033-61760052 None:intergenic 30.0%
ATGAATTGTTTGAATGGAAC+AGG + chr8_3:61760034-61760053 None:intergenic 30.0%
TTGTAATTAGGATGCCAAAT+TGG - chr8_3:61760214-61760233 Msa1300260:five_prime_UTR 30.0%
CAAAGTAAATGTGCTATACT+TGG - chr8_3:61760268-61760287 Msa1300260:five_prime_UTR 30.0%
CAATTTGAGCAAATATACCT+TGG + chr8_3:61760429-61760448 None:intergenic 30.0%
! AAGATCCTTCTAAGAATCAA+AGG - chr8_3:61760565-61760584 Msa1300260:five_prime_UTR 30.0%
ATCTTCCTTTGATTCTTAGA+AGG + chr8_3:61760573-61760592 None:intergenic 30.0%
!! ATGTAGTGTCTTAGTTTGTT+GGG - chr8_3:61760803-61760822 Msa1300260:intron 30.0%
!! ATGCATATTATTTTGTTGGG+GGG + chr8_3:61760840-61760859 None:intergenic 30.0%
!! GATGCATATTATTTTGTTGG+GGG + chr8_3:61760841-61760860 None:intergenic 30.0%
AAAACAGCTTGTATCAGTAT+GGG + chr8_3:61760900-61760919 None:intergenic 30.0%
AAAAACAGCTTGTATCAGTA+TGG + chr8_3:61760901-61760920 None:intergenic 30.0%
GCTGTAAATTAGTAAACTCT+TGG - chr8_3:61760938-61760957 Msa1300260:five_prime_UTR 30.0%
AGGCTATAAATAATGAGCTA+CGG + chr8_3:61761037-61761056 None:intergenic 30.0%
GAATTAATAGAAGCAATCCA+AGG + chr8_3:61761133-61761152 None:intergenic 30.0%
!! GATTCTGTGAAATTTCTAGC+AGG - chr8_3:61752893-61752912 Msa1300260:three_prime_UTR 35.0%
! TTAGCAATTGACTTCCACAA+AGG + chr8_3:61752967-61752986 None:intergenic 35.0%
AATCGCAAATCAAGAGCTTA+AGG + chr8_3:61753047-61753066 None:intergenic 35.0%
!! AAGCTCTTGATTTGCGATTA+AGG - chr8_3:61753048-61753067 Msa1300260:intron 35.0%
TTCTCTGGTACGTAATTCAA+CGG + chr8_3:61753291-61753310 None:intergenic 35.0%
CAGATCCTGTGATTAAATAG+AGG + chr8_3:61753801-61753820 None:intergenic 35.0%
CTCTATTTAATCACAGGATC+TGG - chr8_3:61753799-61753818 Msa1300260:three_prime_UTR 35.0%
CAGTCCATAAATAAGAAGCA+TGG + chr8_3:61753826-61753845 None:intergenic 35.0%
CCGAAGGATTTAACATCAAA+TGG - chr8_3:61753900-61753919 Msa1300260:exon 35.0%
CAACTACAAGTCCATCAAAA+TGG + chr8_3:61753993-61754012 None:intergenic 35.0%
TAAGGAACTCTCACAGTATA+GGG + chr8_3:61754436-61754455 None:intergenic 35.0%
TTAAGGAACTCTCACAGTAT+AGG + chr8_3:61754437-61754456 None:intergenic 35.0%
TGGGCTAAAAACCAGTATAA+TGG - chr8_3:61754486-61754505 Msa1300260:intron 35.0%
TATTCACGCAGGAATTAATG+TGG + chr8_3:61755654-61755673 None:intergenic 35.0%
! GAAGAGTCTGAGATTAGAAA+GGG - chr8_3:61755802-61755821 Msa1300260:intron 35.0%
ACAGGAAAGGAGAATAATGT+TGG - chr8_3:61755829-61755848 Msa1300260:intron 35.0%
CAGGAAAGGAGAATAATGTT+GGG - chr8_3:61755830-61755849 Msa1300260:intron 35.0%
AGGAAAGGAGAATAATGTTG+GGG - chr8_3:61755831-61755850 Msa1300260:intron 35.0%
! AAAACCGTAGCTTTTACTAC+TGG - chr8_3:61756486-61756505 Msa1300260:intron 35.0%
CATTCCAGTAGTAAAAGCTA+CGG + chr8_3:61756493-61756512 None:intergenic 35.0%
TTTCATGAATCGATTATGCG+AGG + chr8_3:61756569-61756588 None:intergenic 35.0%
ATTAAGATGACTTTCATCCG+TGG + chr8_3:61756780-61756799 None:intergenic 35.0%
AGAACGTCCGAGAAAATAAT+TGG + chr8_3:61756883-61756902 None:intergenic 35.0%
TTTCACGGCACTTTATTATG+TGG - chr8_3:61757059-61757078 Msa1300260:intron 35.0%
! ACAGAAGAACCAGAGTTTTA+TGG - chr8_3:61757315-61757334 Msa1300260:intron 35.0%
!!! ATTTTCTAGCTCTTCATCCT+GGG + chr8_3:61757368-61757387 None:intergenic 35.0%
GATGAAGAGCTAGAAAATGA+AGG - chr8_3:61757370-61757389 Msa1300260:intron 35.0%
ATTACCTCTTTGAACATTCG+AGG + chr8_3:61757419-61757438 None:intergenic 35.0%
!!! TGTTTTGATCTTGGTGTGTT+TGG + chr8_3:61757941-61757960 None:intergenic 35.0%
!!! GTTGCAGAATGTTTTGATCT+TGG + chr8_3:61757950-61757969 None:intergenic 35.0%
CAACTAACTCGTTAAGCATT+AGG + chr8_3:61758199-61758218 None:intergenic 35.0%
! GTACCCTAAAAATGGCTTTT+AGG - chr8_3:61758276-61758295 Msa1300260:intron 35.0%
!! CAAAGCATCCTTTTTGTTAG+AGG - chr8_3:61758565-61758584 Msa1300260:intron 35.0%
TAGAGGTAAATTCATACGGT+TGG - chr8_3:61758582-61758601 Msa1300260:intron 35.0%
GAGAAGGTTCATAAGTATGA+AGG - chr8_3:61758694-61758713 Msa1300260:intron 35.0%
AAGTATGAAGGTTCATTCCA+AGG - chr8_3:61758706-61758725 Msa1300260:intron 35.0%
! TTCAAGTTTGATGTCCTTGT+TGG - chr8_3:61758961-61758980 Msa1300260:intron 35.0%
!! AGATGCTTGTCTTGTTTAAG+TGG - chr8_3:61759001-61759020 Msa1300260:intron 35.0%
!! GATGCTTGTCTTGTTTAAGT+GGG - chr8_3:61759002-61759021 Msa1300260:intron 35.0%
CAAAGCAGAGAAATAATGAC+AGG - chr8_3:61759113-61759132 Msa1300260:intron 35.0%
! TTTGAAGCAAACAGCAATGT+TGG + chr8_3:61759190-61759209 None:intergenic 35.0%
!! AACATTGCTGTTTGCTTCAA+AGG - chr8_3:61759189-61759208 Msa1300260:intron 35.0%
GGTATCCATAATGTAGAATC+TGG - chr8_3:61759253-61759272 Msa1300260:intron 35.0%
TCAAGCCAGATTCTACATTA+TGG + chr8_3:61759261-61759280 None:intergenic 35.0%
! ATAGTCTGAGATTCTACTGA+AGG + chr8_3:61759463-61759482 None:intergenic 35.0%
! TTTCTCTTTCAGCTTTTCAC+TGG + chr8_3:61759494-61759513 None:intergenic 35.0%
GTACACACTTGATATGCTAA+TGG + chr8_3:61759539-61759558 None:intergenic 35.0%
ATATCAAGTGTGTACTCACA+AGG - chr8_3:61759544-61759563 Msa1300260:intron 35.0%
TATCAAGTGTGTACTCACAA+GGG - chr8_3:61759545-61759564 Msa1300260:intron 35.0%
AAGTTGTGTTGGACATGATA+TGG - chr8_3:61759643-61759662 Msa1300260:intron 35.0%
GAGCATTTGTGGATAGAAAT+TGG - chr8_3:61759680-61759699 Msa1300260:intron 35.0%
AATTGTTAGATGACTGTGGA+TGG + chr8_3:61759737-61759756 None:intergenic 35.0%
!!! GTTTTTTAATCCTCATGGCT+GGG + chr8_3:61759794-61759813 None:intergenic 35.0%
!!! AGTTTTTTAATCCTCATGGC+TGG + chr8_3:61759795-61759814 None:intergenic 35.0%
AGTGAAGTAAGTCCAAGTTT+AGG + chr8_3:61759851-61759870 None:intergenic 35.0%
!! CTAGGTTGATCCATATATTG+TGG + chr8_3:61760087-61760106 None:intergenic 35.0%
! AAGTTTTCCAACAACATGCT+AGG + chr8_3:61760105-61760124 None:intergenic 35.0%
TAAATGTGCTATACTTGGAC+AGG - chr8_3:61760273-61760292 Msa1300260:five_prime_UTR 35.0%
TTTATCACAGGCTAGCATTT+CGG - chr8_3:61760340-61760359 Msa1300260:five_prime_UTR 35.0%
! ATTTCGGTGCAAATTGAACT+TGG - chr8_3:61760356-61760375 Msa1300260:five_prime_UTR 35.0%
TATACCTTGGAAACACACAT+TGG + chr8_3:61760416-61760435 None:intergenic 35.0%
!! CATGTAGTGTCTTAGTTTGT+TGG - chr8_3:61760802-61760821 Msa1300260:intron 35.0%
TAAATAATGAGCTACGGAAG+AGG + chr8_3:61761031-61761050 None:intergenic 35.0%
TTGTTTACTTGACCTTTCCT+TGG - chr8_3:61761113-61761132 Msa1300260:five_prime_UTR 35.0%
AATAGAAGCAATCCAAGGAA+AGG + chr8_3:61761128-61761147 None:intergenic 35.0%
! CGCTCTGTGATTGAAGATTT+TGG - chr8_3:61752917-61752936 Msa1300260:intron 40.0%
TGATTATCGAACGACCTTTG+TGG - chr8_3:61752950-61752969 Msa1300260:intron 40.0%
TATACAGTACCTTGAGCAGA+TGG + chr8_3:61753564-61753583 None:intergenic 40.0%
GAAAAACATGGCAACAACAG+AGG + chr8_3:61753649-61753668 None:intergenic 40.0%
! CATGTTTTTCTCTGTGACGT+GGG - chr8_3:61753659-61753678 Msa1300260:three_prime_UTR 40.0%
! ATGTTTTTCTCTGTGACGTG+GGG - chr8_3:61753660-61753679 Msa1300260:three_prime_UTR 40.0%
ATTAAATAGAGGTCACGTGC+AGG + chr8_3:61753790-61753809 None:intergenic 40.0%
CGTGACCTCTATTTAATCAC+AGG - chr8_3:61753793-61753812 Msa1300260:three_prime_UTR 40.0%
! TGGGCCATGCTTCTTATTTA+TGG - chr8_3:61753819-61753838 Msa1300260:three_prime_UTR 40.0%
ATTTCACATCAGGCTCGATA+AGG - chr8_3:61754020-61754039 Msa1300260:CDS 40.0%
ATGTATGACATGCAGGTCAA+GGG + chr8_3:61755427-61755446 None:intergenic 40.0%
AATGTATGACATGCAGGTCA+AGG + chr8_3:61755428-61755447 None:intergenic 40.0%
GAAGGAAATGTATGACATGC+AGG + chr8_3:61755434-61755453 None:intergenic 40.0%
TGCTGTTCATGCATGAAAGA+AGG + chr8_3:61755452-61755471 None:intergenic 40.0%
TCAAGACCCATGATTTCTTG+CGG - chr8_3:61755479-61755498 Msa1300260:intron 40.0%
TAATGGCCGCAAGAAATCAT+GGG + chr8_3:61755488-61755507 None:intergenic 40.0%
!! ATGAAGCTGGTGTTGCTAAA+GGG + chr8_3:61755585-61755604 None:intergenic 40.0%
! GTGAAAAGTGATGATGCTTC+TGG + chr8_3:61755700-61755719 None:intergenic 40.0%
TTCAAGCGGTTTCACATTGT+GGG - chr8_3:61755780-61755799 Msa1300260:intron 40.0%
! GGAAGAGTCTGAGATTAGAA+AGG - chr8_3:61755801-61755820 Msa1300260:intron 40.0%
GAGATTAGAAAGGGAAAGAC+AGG - chr8_3:61755811-61755830 Msa1300260:intron 40.0%
TAGAAAGGGAAAGACAGGAA+AGG - chr8_3:61755816-61755835 Msa1300260:intron 40.0%
GTTGGGGACAAACTCATTAT+AGG - chr8_3:61755847-61755866 Msa1300260:intron 40.0%
AAAGTGTAGGCTGCTGTAAT+GGG + chr8_3:61755989-61756008 None:intergenic 40.0%
TAAAGTGTAGGCTGCTGTAA+TGG + chr8_3:61755990-61756009 None:intergenic 40.0%
AAGTGTTAGTATCTTGGGGT+TGG + chr8_3:61756089-61756108 None:intergenic 40.0%
!! CCGGTCCTTATGTTTTTCAA+GGG + chr8_3:61756192-61756211 None:intergenic 40.0%
CCCTTGAAAAACATAAGGAC+CGG - chr8_3:61756189-61756208 Msa1300260:intron 40.0%
! TCCGGTCCTTATGTTTTTCA+AGG + chr8_3:61756193-61756212 None:intergenic 40.0%
! CGTAGCTTTTACTACTGGAA+TGG - chr8_3:61756491-61756510 Msa1300260:intron 40.0%
ATTATGCGAGGCAAAACCAT+TGG + chr8_3:61756557-61756576 None:intergenic 40.0%
! TATGCCTTTTGTCTACACCA+CGG - chr8_3:61756747-61756766 Msa1300260:intron 40.0%
GCGACGGTAATAACATTTCA+CGG - chr8_3:61757044-61757063 Msa1300260:intron 40.0%
GGAAATGATGAAATCTGCAC+AGG - chr8_3:61757336-61757355 Msa1300260:intron 40.0%
!!! CATTTTCTAGCTCTTCATCC+TGG + chr8_3:61757369-61757388 None:intergenic 40.0%
GAATCCTCGAATGTTCAAAG+AGG - chr8_3:61757412-61757431 Msa1300260:intron 40.0%
!!! TGGTGTGTTTGGCTTTTGAT+CGG + chr8_3:61757930-61757949 None:intergenic 40.0%
AGAGAAGAATTCCGTGCTAT+TGG - chr8_3:61758146-61758165 Msa1300260:intron 40.0%
! GAGAAGAATTCCGTGCTATT+GGG - chr8_3:61758147-61758166 Msa1300260:intron 40.0%
! AGTAAAAGTGTGGCTGAACA+AGG + chr8_3:61758360-61758379 None:intergenic 40.0%
! TTGTTCAGCCACACTTTTAC+TGG - chr8_3:61758359-61758378 Msa1300260:intron 40.0%
! TGTTCAGCCACACTTTTACT+GGG - chr8_3:61758360-61758379 Msa1300260:intron 40.0%
TTCCACACAGTGATCAAAAG+AGG - chr8_3:61758540-61758559 Msa1300260:intron 40.0%
TCCACACAGTGATCAAAAGA+GGG - chr8_3:61758541-61758560 Msa1300260:intron 40.0%
ATGAAGGTTCATTCCAAGGT+TGG - chr8_3:61758710-61758729 Msa1300260:intron 40.0%
! GAAAGTGTGGTATTTACCCA+TGG + chr8_3:61758760-61758779 None:intergenic 40.0%
CAGCTTAAGATAGGAAAGTG+TGG + chr8_3:61758773-61758792 None:intergenic 40.0%
TTGCTCAGTCAATTCCAACA+AGG + chr8_3:61758978-61758997 None:intergenic 40.0%
CGAGATTGAAAACTTTCTGC+TGG + chr8_3:61759139-61759158 None:intergenic 40.0%
! GCAGAAAGTTTTCAATCTCG+TGG - chr8_3:61759139-61759158 Msa1300260:intron 40.0%
CGGATGATCTATTGTCTTCA+TGG + chr8_3:61759296-61759315 None:intergenic 40.0%
AAGACAATAGATCATCCGTC+TGG - chr8_3:61759298-61759317 Msa1300260:intron 40.0%
! TCCGTCTGGAATAACAAACA+AGG - chr8_3:61759312-61759331 Msa1300260:intron 40.0%
!! GCCTTGTTTGTTATTCCAGA+CGG + chr8_3:61759316-61759335 None:intergenic 40.0%
TTAACTTCAACCCAAATCGG+AGG - chr8_3:61759370-61759389 Msa1300260:intron 40.0%
TATCCACAAATGCTCACTAG+GGG + chr8_3:61759675-61759694 None:intergenic 40.0%
CTATCCACAAATGCTCACTA+GGG + chr8_3:61759676-61759695 None:intergenic 40.0%
TCTATCCACAAATGCTCACT+AGG + chr8_3:61759677-61759696 None:intergenic 40.0%
GTGGATAGAAATTGGAGATG+TGG - chr8_3:61759688-61759707 Msa1300260:intron 40.0%
ATAGAAATTGGAGATGTGGC+AGG - chr8_3:61759692-61759711 Msa1300260:intron 40.0%
TATATATTCACCCAGCCATG+AGG - chr8_3:61759781-61759800 Msa1300260:intron 40.0%
TTCTGTTTGCAGCCTAAACT+TGG - chr8_3:61759836-61759855 Msa1300260:intron 40.0%
GTGGACATCTATTCAGAGAA+AGG + chr8_3:61759875-61759894 None:intergenic 40.0%
AGCAACATGAATTGCACAAG+TGG + chr8_3:61759894-61759913 None:intergenic 40.0%
! TTCAGGAGTGGATTTATCAC+AGG - chr8_3:61760328-61760347 Msa1300260:five_prime_UTR 40.0%
!! CACATTGGCATTGGTATGTT+TGG + chr8_3:61760401-61760420 None:intergenic 40.0%
TTGGAAACACACATTGGCAT+TGG + chr8_3:61760410-61760429 None:intergenic 40.0%
AATGCCAATGTGTGTTTCCA+AGG - chr8_3:61760409-61760428 Msa1300260:five_prime_UTR 40.0%
! TTTGTCGATCATTTTCCCCT+AGG - chr8_3:61760536-61760555 Msa1300260:five_prime_UTR 40.0%
AAGGATCTTCATCATCCTAG+GGG + chr8_3:61760554-61760573 None:intergenic 40.0%
GAAGGATCTTCATCATCCTA+GGG + chr8_3:61760555-61760574 None:intergenic 40.0%
AGAAGGATCTTCATCATCCT+AGG + chr8_3:61760556-61760575 None:intergenic 40.0%
TGCTGGATTATTATCCTGCA+TGG - chr8_3:61760764-61760783 Msa1300260:intron 40.0%
!! CTTAGTTTGTTGGGATCCTT+AGG - chr8_3:61760812-61760831 Msa1300260:intron 40.0%
CGCACTCTTAACTCGTTGTT+TGG - chr8_3:61752683-61752702 Msa1300260:three_prime_UTR 45.0%
CTTCCTCAAGCACGTTCTTA+TGG - chr8_3:61753339-61753358 Msa1300260:three_prime_UTR 45.0%
! AGATGGCCTTGGATCTTGTT+CGG + chr8_3:61753547-61753566 None:intergenic 45.0%
CCACGTCACAGAGAAAAACA+TGG + chr8_3:61753661-61753680 None:intergenic 45.0%
! CCATGTTTTTCTCTGTGACG+TGG - chr8_3:61753658-61753677 Msa1300260:three_prime_UTR 45.0%
!! TTTCCTATGGTGGATTCCGA+AGG - chr8_3:61753884-61753903 Msa1300260:three_prime_UTR 45.0%
AATCCTTCGGAATCCACCAT+AGG + chr8_3:61753890-61753909 None:intergenic 45.0%
ATGCTGCACACTTTATCGGA+CGG + chr8_3:61753954-61753973 None:intergenic 45.0%
CCTCATGCTGCACACTTTAT+CGG + chr8_3:61753958-61753977 None:intergenic 45.0%
TAAAGTGTGCAGCATGAGGA+TGG - chr8_3:61753959-61753978 Msa1300260:CDS 45.0%
ACATCAGGCTCGATAAGGAT+TGG - chr8_3:61754025-61754044 Msa1300260:CDS 45.0%
AAAACTACACCACACGCACA+CGG + chr8_3:61754056-61754075 None:intergenic 45.0%
TAGTTGCACGCAGAGTTACT+CGG + chr8_3:61754203-61754222 None:intergenic 45.0%
AGTAACTCTGCGTGCAACTA+TGG - chr8_3:61754203-61754222 Msa1300260:CDS 45.0%
AAGTGCATTAAATGGTGCGC+AGG + chr8_3:61755242-61755261 None:intergenic 45.0%
GCAAGAAATCATGGGTCTTG+AGG + chr8_3:61755480-61755499 None:intergenic 45.0%
CTAATGGCCGCAAGAAATCA+TGG + chr8_3:61755489-61755508 None:intergenic 45.0%
TGATTTCTTGCGGCCATTAG+AGG - chr8_3:61755489-61755508 Msa1300260:CDS 45.0%
TTGGCTTCTACCTCCTCTAA+TGG + chr8_3:61755505-61755524 None:intergenic 45.0%
! TTCTTCCTTGGCACTGGATT+TGG + chr8_3:61755524-61755543 None:intergenic 45.0%
AGCCGCAGATGAAATCTCAT+CGG - chr8_3:61755543-61755562 Msa1300260:CDS 45.0%
CACCGATGAGATTTCATCTG+CGG + chr8_3:61755548-61755567 None:intergenic 45.0%
!! TGAAGCTGGTGTTGCTAAAG+GGG + chr8_3:61755584-61755603 None:intergenic 45.0%
!! GATGAAGCTGGTGTTGCTAA+AGG + chr8_3:61755586-61755605 None:intergenic 45.0%
ACCTCTTACCTGGAGGAATT+GGG - chr8_3:61755614-61755633 Msa1300260:intron 45.0%
CTATAAGTCCCAATTCCTCC+AGG + chr8_3:61755625-61755644 None:intergenic 45.0%
!! AGTGATGATGCTTCTGGCTT+TGG + chr8_3:61755694-61755713 None:intergenic 45.0%
TGTGCATCAAGCAACTAGTG+CGG - chr8_3:61755720-61755739 Msa1300260:intron 45.0%
TGAAGTATGTGAGCTGCAGT+TGG + chr8_3:61755764-61755783 None:intergenic 45.0%
TGCAGCTCACATACTTCAAG+CGG - chr8_3:61755766-61755785 Msa1300260:intron 45.0%
CTTCAAGCGGTTTCACATTG+TGG - chr8_3:61755779-61755798 Msa1300260:intron 45.0%
GGGGACAAACTCATTATAGG+AGG - chr8_3:61755850-61755869 Msa1300260:intron 45.0%
ACATCCGTGGTGTAGACAAA+AGG + chr8_3:61756754-61756773 None:intergenic 45.0%
GAATGACACTAGATACGTCG+TGG - chr8_3:61756913-61756932 Msa1300260:intron 45.0%
!! TTGAAGCTGACTTGCTAGAC+AGG + chr8_3:61756946-61756965 None:intergenic 45.0%
GCAGATTCTGCTGCTAAGTT+AGG - chr8_3:61757081-61757100 Msa1300260:intron 45.0%
GTTAGGTCAGTGGACATTGA+AGG - chr8_3:61757098-61757117 Msa1300260:intron 45.0%
TGCTACTGCCTTTCTCAACA+AGG + chr8_3:61757453-61757472 None:intergenic 45.0%
! AATTCCGTGCTATTGGGACT+TGG - chr8_3:61758153-61758172 Msa1300260:intron 45.0%
! ATTCCGTGCTATTGGGACTT+GGG - chr8_3:61758154-61758173 Msa1300260:intron 45.0%
TTGGGAGTAGTGTAACTGGA+AGG - chr8_3:61758172-61758191 Msa1300260:intron 45.0%
! GTTCAGCCACACTTTTACTG+GGG - chr8_3:61758361-61758380 Msa1300260:intron 45.0%
! TCCCTCTTTTGATCACTGTG+TGG + chr8_3:61758545-61758564 None:intergenic 45.0%
AGCCAGAAAAACTGATGCCA+TGG - chr8_3:61758740-61758759 Msa1300260:intron 45.0%
GCCAGAAAAACTGATGCCAT+GGG - chr8_3:61758741-61758760 Msa1300260:intron 45.0%
! ACCCATGGCATCAGTTTTTC+TGG + chr8_3:61758745-61758764 None:intergenic 45.0%
TTTCAATCTCGTGGCGCAAA+TGG - chr8_3:61759148-61759167 Msa1300260:intron 45.0%
GCAAACAGCAATGTTGGAGA+TGG + chr8_3:61759184-61759203 None:intergenic 45.0%
! ATCTGGCTTGAGCACAACAA+CGG - chr8_3:61759270-61759289 Msa1300260:intron 45.0%
GGTTGGGAAGAAATAGGACT+TGG + chr8_3:61759343-61759362 None:intergenic 45.0%
TCAACCCAAATCGGAGGTTT+AGG - chr8_3:61759376-61759395 Msa1300260:intron 45.0%
TCCACCTAAACCTCCGATTT+GGG + chr8_3:61759383-61759402 None:intergenic 45.0%
GAGAAAGAGCTCACCATTGA+AGG - chr8_3:61759508-61759527 Msa1300260:intron 45.0%
AAAGAGCTCACCATTGAAGG+AGG - chr8_3:61759511-61759530 Msa1300260:intron 45.0%
GGATCAACCTAGCATGTTGT+TGG - chr8_3:61760095-61760114 Msa1300260:intron 45.0%
GCTATACTTGGACAGGTTGT+TGG - chr8_3:61760280-61760299 Msa1300260:five_prime_UTR 45.0%
! GCATTGGTATGTTTGGTCTG+AGG + chr8_3:61760394-61760413 None:intergenic 45.0%
AATCAAAGGAAGATGCGCTC+TGG - chr8_3:61760579-61760598 Msa1300260:intron 45.0%
! GGGGTATTTATTTCCTGTGC+TGG - chr8_3:61760747-61760766 Msa1300260:intron 45.0%
GCAGGATAATAATCCAGCAC+AGG + chr8_3:61760763-61760782 None:intergenic 45.0%
ACAGTCAATCTCATCCATGC+AGG + chr8_3:61760781-61760800 None:intergenic 45.0%
ACAGCTTGTATCAGTATGGG+AGG + chr8_3:61760897-61760916 None:intergenic 45.0%
!!! ATAATTTGTTTTATAATTTT+TGG - chr8_3:61753581-61753600 Msa1300260:three_prime_UTR 5.0%
!! ATAATACTAAAAAATAAATT+TGG + chr8_3:61757663-61757682 None:intergenic 5.0%
!! ATAATTGATAAAAATTATTA+AGG + chr8_3:61760695-61760714 None:intergenic 5.0%
!!! AATAATTTTTATCAATTATT+TGG - chr8_3:61760696-61760715 Msa1300260:intron 5.0%
!!! ATAATTTTTATCAATTATTT+GGG - chr8_3:61760697-61760716 Msa1300260:intron 5.0%
!!! AACTTTTTAAAATTAATTTT+TGG - chr8_3:61760722-61760741 Msa1300260:intron 5.0%
CGAAAGATGAGGTCTTGGGT+CGG + chr8_3:61752429-61752448 None:intergenic 50.0%
GCAGCGAAAGATGAGGTCTT+GGG + chr8_3:61752433-61752452 None:intergenic 50.0%
TGCAGCGAAAGATGAGGTCT+TGG + chr8_3:61752434-61752453 None:intergenic 50.0%
GCTCCATAAGAACGTGCTTG+AGG + chr8_3:61753345-61753364 None:intergenic 50.0%
TTCTGTGCGGAAACAGAAGC+AGG - chr8_3:61753474-61753493 Msa1300260:three_prime_UTR 50.0%
TCTGTGCGGAAACAGAAGCA+GGG - chr8_3:61753475-61753494 Msa1300260:three_prime_UTR 50.0%
CAACTGCCGAACAAGATCCA+AGG - chr8_3:61753538-61753557 Msa1300260:three_prime_UTR 50.0%
CCGATAAAGTGTGCAGCATG+AGG - chr8_3:61753955-61753974 Msa1300260:CDS 50.0%
TGTGCAGCATGAGGATGGTA+GGG - chr8_3:61753964-61753983 Msa1300260:CDS 50.0%
AAACTACACCACACGCACAC+GGG + chr8_3:61754055-61754074 None:intergenic 50.0%
TTTCTTGCGGCCATTAGAGG+AGG - chr8_3:61755492-61755511 Msa1300260:CDS 50.0%
AGAAGCCAAATCCAGTGCCA+AGG - chr8_3:61755516-61755535 Msa1300260:CDS 50.0%
TTCATCTGCGGCTTCTTCCT+TGG + chr8_3:61755536-61755555 None:intergenic 50.0%
CGCAGATGAAATCTCATCGG+TGG - chr8_3:61755546-61755565 Msa1300260:CDS 50.0%
!! GAAGCTGGTGTTGCTAAAGG+GGG + chr8_3:61755583-61755602 None:intergenic 50.0%
AGGTGCTCAACTGATGAAGC+TGG + chr8_3:61755598-61755617 None:intergenic 50.0%
TCAGTTGAGCACCTCTTACC+TGG - chr8_3:61755604-61755623 Msa1300260:intron 50.0%
CACCTCTTACCTGGAGGAAT+TGG - chr8_3:61755613-61755632 Msa1300260:intron 50.0%
TCCCAATTCCTCCAGGTAAG+AGG + chr8_3:61755618-61755637 None:intergenic 50.0%
CATGGACACACACACACACA+TGG - chr8_3:61756375-61756394 Msa1300260:CDS 50.0%
TACACCACGGATGTACACCA+CGG - chr8_3:61756760-61756779 Msa1300260:intron 50.0%
TGACACTAGATACGTCGTGG+CGG - chr8_3:61756916-61756935 Msa1300260:intron 50.0%
CTGCTGCTAAGTTAGGTCAG+TGG - chr8_3:61757088-61757107 Msa1300260:intron 50.0%
AGGAGAACTAAGGGTGAGAG+TGG - chr8_3:61757892-61757911 Msa1300260:CDS 50.0%
GAACTAAGGGTGAGAGTGGA+CGG - chr8_3:61757896-61757915 Msa1300260:CDS 50.0%
GAGACACTTGCAAACTGCGA+TGG - chr8_3:61758052-61758071 Msa1300260:intron 50.0%
ACACTTGCAAACTGCGATGG+AGG - chr8_3:61758055-61758074 Msa1300260:intron 50.0%
ACTCCCAAGTCCCAATAGCA+CGG + chr8_3:61758160-61758179 None:intergenic 50.0%
GGACTTGGGAGTAGTGTAAC+TGG - chr8_3:61758168-61758187 Msa1300260:intron 50.0%
! AGCCACACTTTTACTGGGGT+TGG - chr8_3:61758365-61758384 Msa1300260:intron 50.0%
! GCCACACTTTTACTGGGGTT+GGG - chr8_3:61758366-61758385 Msa1300260:intron 50.0%
TCCCAACCCCAGTAAAAGTG+TGG + chr8_3:61758370-61758389 None:intergenic 50.0%
TTACTGGGGTTGGGATTGTC+TGG - chr8_3:61758375-61758394 Msa1300260:intron 50.0%
! CTGGCTCGTTATTCCAACCT+TGG + chr8_3:61758726-61758745 None:intergenic 50.0%
AATCTCGTGGCGCAAATGGT+GGG - chr8_3:61759152-61759171 Msa1300260:intron 50.0%
ACCATCTCCCCAACAACTCA+TGG - chr8_3:61759229-61759248 Msa1300260:intron 50.0%
CCATCTCCCCAACAACTCAT+GGG - chr8_3:61759230-61759249 Msa1300260:intron 50.0%
CATCTCCCCAACAACTCATG+GGG - chr8_3:61759231-61759250 Msa1300260:intron 50.0%
ATCTCCCCAACAACTCATGG+GGG - chr8_3:61759232-61759251 Msa1300260:intron 50.0%
GATACCCCCATGAGTTGTTG+GGG + chr8_3:61759239-61759258 None:intergenic 50.0%
GGATACCCCCATGAGTTGTT+GGG + chr8_3:61759240-61759259 None:intergenic 50.0%
TGGATACCCCCATGAGTTGT+TGG + chr8_3:61759241-61759260 None:intergenic 50.0%
ACCCAAATCGGAGGTTTAGG+TGG - chr8_3:61759379-61759398 Msa1300260:intron 50.0%
CTCCACCTAAACCTCCGATT+TGG + chr8_3:61759384-61759403 None:intergenic 50.0%
GCTAATGGCACCTCCTTCAA+TGG + chr8_3:61759524-61759543 None:intergenic 50.0%
CATCCCCTAGTGAGCATTTG+TGG - chr8_3:61759669-61759688 Msa1300260:intron 50.0%
ACACATGCCTTGCAGAGTTC+AGG - chr8_3:61760311-61760330 Msa1300260:five_prime_UTR 50.0%
ATCCACTCCTGAACTCTGCA+AGG + chr8_3:61760321-61760340 None:intergenic 50.0%
! ATTTTGTTGGGGGGAGCCTA+AGG + chr8_3:61760831-61760850 None:intergenic 50.0%
! GCTATCACAATGAGGGTGTG+AGG + chr8_3:61761057-61761076 None:intergenic 50.0%
! GAGCACTGCAGCGAAAGATG+AGG + chr8_3:61752440-61752459 None:intergenic 55.0%
GCACGTTCTTATGGAGCCGA+AGG - chr8_3:61753348-61753367 Msa1300260:three_prime_UTR 55.0%
GATCCAAGGCCATCTGCTCA+AGG - chr8_3:61753552-61753571 Msa1300260:three_prime_UTR 55.0%
GTACCTTGAGCAGATGGCCT+TGG + chr8_3:61753558-61753577 None:intergenic 55.0%
TCTCTGTGACGTGGGGATCA+TGG - chr8_3:61753667-61753686 Msa1300260:three_prime_UTR 55.0%
GTGTGCAGCATGAGGATGGT+AGG - chr8_3:61753963-61753982 Msa1300260:CDS 55.0%
GTGCAGCATGAGGATGGTAG+GGG - chr8_3:61753965-61753984 Msa1300260:CDS 55.0%
TGCAGCATGAGGATGGTAGG+GGG - chr8_3:61753966-61753985 Msa1300260:CDS 55.0%
! TGGTAGGGGGCCCATTTTGA+TGG - chr8_3:61753979-61753998 Msa1300260:CDS 55.0%
GTTGAGCACCTCTTACCTGG+AGG - chr8_3:61755607-61755626 Msa1300260:intron 55.0%
TCATCCGTGGTGTACATCCG+TGG + chr8_3:61756767-61756786 None:intergenic 55.0%
ATCTGCACAGGATTGTGCCC+AGG - chr8_3:61757348-61757367 Msa1300260:intron 55.0%
TTGGGATTGTCTGGCGGCTT+TGG - chr8_3:61758384-61758403 Msa1300260:intron 55.0%
CAATCTCGTGGCGCAAATGG+TGG - chr8_3:61759151-61759170 Msa1300260:intron 55.0%
CCCATGAGTTGTTGGGGAGA+TGG + chr8_3:61759233-61759252 None:intergenic 55.0%
GGAGATGTGGCAGGTGATTG+TGG - chr8_3:61759701-61759720 Msa1300260:intron 55.0%
TGCCTTGCAGAGTTCAGGAG+TGG - chr8_3:61760316-61760335 Msa1300260:five_prime_UTR 55.0%
GTGCGGAAACAGAAGCAGGG+AGG - chr8_3:61753478-61753497 Msa1300260:three_prime_UTR 60.0%
TTGGCATTCCCGTGTGCGTG+TGG - chr8_3:61754044-61754063 Msa1300260:CDS 60.0%
TGCGGCTTCTTCCTTGGCAC+TGG + chr8_3:61755530-61755549 None:intergenic 60.0%
CTGGGGTTGGGATTGTCTGG+CGG - chr8_3:61758378-61758397 Msa1300260:intron 60.0%
!! CGCTCTGGCTCTAGAGTCAC+TGG - chr8_3:61760594-61760613 Msa1300260:intron 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 61752327 61761161 61752327 ID=Msa1300260;Name=Msa1300260
chr8_3 mRNA 61752327 61761161 61752327 ID=Msa1300260-mRNA-1;Parent=Msa1300260;Name=Msa1300260-mRNA-1;_AED=0.04;_eAED=0.04;_QI=747|0.90|0.83|1|0.72|0.58|12|1464|488
chr8_3 exon 61752327 61752930 61752327 ID=Msa1300260-mRNA-1:exon:18279;Parent=Msa1300260-mRNA-1
chr8_3 exon 61753058 61754367 61753058 ID=Msa1300260-mRNA-1:exon:18278;Parent=Msa1300260-mRNA-1
chr8_3 exon 61754726 61754821 61754726 ID=Msa1300260-mRNA-1:exon:18277;Parent=Msa1300260-mRNA-1
chr8_3 exon 61754902 61754971 61754902 ID=Msa1300260-mRNA-1:exon:18276;Parent=Msa1300260-mRNA-1
chr8_3 exon 61755486 61755594 61755486 ID=Msa1300260-mRNA-1:exon:18275;Parent=Msa1300260-mRNA-1
chr8_3 exon 61756055 61756182 61756055 ID=Msa1300260-mRNA-1:exon:18274;Parent=Msa1300260-mRNA-1
chr8_3 exon 61756304 61756403 61756304 ID=Msa1300260-mRNA-1:exon:18273;Parent=Msa1300260-mRNA-1
chr8_3 exon 61757617 61757791 61757617 ID=Msa1300260-mRNA-1:exon:18272;Parent=Msa1300260-mRNA-1
chr8_3 exon 61757801 61758018 61757801 ID=Msa1300260-mRNA-1:exon:18271;Parent=Msa1300260-mRNA-1
chr8_3 exon 61759915 61759998 61759915 ID=Msa1300260-mRNA-1:exon:18270;Parent=Msa1300260-mRNA-1
chr8_3 exon 61760119 61760594 61760119 ID=Msa1300260-mRNA-1:exon:18269;Parent=Msa1300260-mRNA-1
chr8_3 exon 61760854 61761161 61760854 ID=Msa1300260-mRNA-1:exon:18268;Parent=Msa1300260-mRNA-1
chr8_3 five_prime_UTR 61760854 61761161 61760854 ID=Msa1300260-mRNA-1:five_prime_utr;Parent=Msa1300260-mRNA-1
chr8_3 five_prime_UTR 61760156 61760594 61760156 ID=Msa1300260-mRNA-1:five_prime_utr;Parent=Msa1300260-mRNA-1
chr8_3 CDS 61760119 61760155 61760119 ID=Msa1300260-mRNA-1:cds;Parent=Msa1300260-mRNA-1
chr8_3 CDS 61759915 61759998 61759915 ID=Msa1300260-mRNA-1:cds;Parent=Msa1300260-mRNA-1
chr8_3 CDS 61757801 61758018 61757801 ID=Msa1300260-mRNA-1:cds;Parent=Msa1300260-mRNA-1
chr8_3 CDS 61757617 61757791 61757617 ID=Msa1300260-mRNA-1:cds;Parent=Msa1300260-mRNA-1
chr8_3 CDS 61756304 61756403 61756304 ID=Msa1300260-mRNA-1:cds;Parent=Msa1300260-mRNA-1
chr8_3 CDS 61756055 61756182 61756055 ID=Msa1300260-mRNA-1:cds;Parent=Msa1300260-mRNA-1
chr8_3 CDS 61755486 61755594 61755486 ID=Msa1300260-mRNA-1:cds;Parent=Msa1300260-mRNA-1
chr8_3 CDS 61754902 61754971 61754902 ID=Msa1300260-mRNA-1:cds;Parent=Msa1300260-mRNA-1
chr8_3 CDS 61754726 61754821 61754726 ID=Msa1300260-mRNA-1:cds;Parent=Msa1300260-mRNA-1
chr8_3 CDS 61753918 61754367 61753918 ID=Msa1300260-mRNA-1:cds;Parent=Msa1300260-mRNA-1
chr8_3 three_prime_UTR 61753058 61753917 61753058 ID=Msa1300260-mRNA-1:three_prime_utr;Parent=Msa1300260-mRNA-1
chr8_3 three_prime_UTR 61752327 61752930 61752327 ID=Msa1300260-mRNA-1:three_prime_utr;Parent=Msa1300260-mRNA-1
Gene Sequence

>Msa1300260

ATGGAGCTTCCTCAAGCACGTTCTTATGGAGCCGAAGAAGCAGGGAGGAAATCGACGCATGATTTTCTGTCGCTATACAGTAATTCAACTGCCGAACAAGATCCAAGGCCATCTGCTCAAGCAAGTTTCCTCAAGACCCATGATTTCTTGCGGCCATTAGAGGAGGTAGAAGCCAAATCCAGTGCCAAGGAAGAAGCCGCAGATGAAATCTCATCGGTGGTTGAGAAGCAACCCCCTTTAGCAACACCAGCTTCATCAGTTGAGCACCTCTTACCTGGAGGAATTGGGACTTATAGTATCAGCCACATTAATTCCTGCGTGAATAATAATAATCAAAGGCCAGAAGCATCATCACTTTTCACTGTGCATCAAGCAACTAGTGCGGATAGAAATGATGACAACTCCAACTGCAGCTCACATACTTCAAGCGGTTTCACATTGTGGGAAGAGTCTGAGATTAGAAAGGGAAAGACAGGAAAGGAGAATAATGTTGGGGACAAACTCATTATAGGAGATTCTGCTGCTAAGTTAGGTCAGTGGACATTGAAGGAGCGAACGTCTCAATCGTTTTCTAACAATCATCATGGCAGCTTCAACTCTCGCTCTTCATCTCAGACAACTGGACAGAAGAACCAGAGTTTTATGGAAATGATGAAATCTGCACAGGATTGTGCCCAGGATGAAGAGCTAGAAAATGAAGGAACGTTTTTTCTCAAGAGAGAATCCTCGAATGTTCAAAGAGGAGAACTAAGGGTGAGAGTGGACGGCAAGAGTACCGATCAAAAGCCAAACACACCAAGATCAAAACATTCTGCAACAGAGCAGCGAAGAAGAAGCAAAATTAATGACAGGTTTCAGATGCTACGAGAGCTTATTCCACACAGTGATCAAAAGAGGGACAAAGCATCCTTTTTGTTAGAGGTCATTGAGTACATTCACTTTTTACAAGAGAAGGTTCATAAGTATGAAGGTTCATTCCAAGGTTGGAATAACGAGCCAGAAAAACTGATGCCATGGAGAAATAATGACAGGCCAGCAGAAAGTTTTCAATCTCGTGGCGCAAATGGTGGGTCTAATCCATCTCCAACATTGCTGTTTGCTTCAAAGGTTGACGAGAAAAACATCACCATCTCCCCAACAACTCATGGGGGTATCCATAATGTAGAATCTGGCTTGAGCACAACAACGGCCATGAAGACAATAGATCATCCGTCTGGAATAACAAACAAGGCTTTTCCAAGTCCTATTTCTTCCCAACCAAATTTCTTAACTTCAACCCAAATCGGAGGTTTAGGTGGAGCAGTGTCTCAGCTCAGACGTAGATTATCATCTGATGCAGAGAACACCAATTATCAACCTTCAGTAGAATCTCAGACTATGACTTCAACCAGTGAAAAGCTGAAAGAGAAAGAGCTCACCATTGAAGGAGGTGCCATTAGCATATCAAGTGTGTACTCACAAGGGTGA
Protein sequence

>Msa1300260

MELPQARSYGAEEAGRKSTHDFLSLYSNSTAEQDPRPSAQASFLKTHDFLRPLEEVEAKSSAKEEAADEISSVVEKQPPLATPASSVEHLLPGGIGTYSISHINSCVNNNNQRPEASSLFTVHQATSADRNDDNSNCSSHTSSGFTLWEESEIRKGKTGKENNVGDKLIIGDSAAKLGQWTLKERTSQSFSNNHHGSFNSRSSSQTTGQKNQSFMEMMKSAQDCAQDEELENEGTFFLKRESSNVQRGELRVRVDGKSTDQKPNTPRSKHSATEQRRRSKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIHFLQEKVHKYEGSFQGWNNEPEKLMPWRNNDRPAESFQSRGANGGSNPSPTLLFASKVDEKNITISPTTHGGIHNVESGLSTTTAMKTIDHPSGITNKAFPSPISSQPNFLTSTQIGGLGGAVSQLRRRLSSDAENTNYQPSVESQTMTSTSEKLKEKELTIEGGAISISSVYSQG*