Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303450 | sp|P61166|TM258_MOUSE | 50.725 | 69 | 34 | 0 | 45 | 113 | 11 | 79 | 8.65e-19 | 77.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303450 | A0A396IGA2 | 100.000 | 76 | 0 | 0 | 38 | 113 | 1 | 76 | 6.70e-45 | 149 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0979730 | Msa1303450 | 0.810598 | 1.064573e-50 | -8.615850e-47 |
| Msa1051880 | Msa1303450 | 0.800187 | 1.621026e-48 | -8.615850e-47 |
| Msa1081980 | Msa1303450 | 0.812042 | 5.171823e-51 | -8.615850e-47 |
| Msa0562030 | Msa1303450 | 0.822175 | 2.726680e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303450 | MtrunA17_Chr4g0071231 | 100.000 | 76 | 0 | 0 | 38 | 113 | 1 | 76 | 1.29e-48 | 149 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1303450 | AT4G29735.1 | 78.947 | 76 | 16 | 0 | 38 | 113 | 1 | 76 | 3.79e-26 | 93.2 |
| Msa1303450 | AT4G29735.2 | 61.224 | 98 | 16 | 1 | 38 | 113 | 1 | 98 | 8.13e-21 | 80.5 |
Find 28 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATCTTCTTCACAGGGTTT+TGG | 0.146048 | 8_3:+66598556 | Msa1303450:intron |
| ATAGGACTCGCGATCGCTTT+TGG | 0.223229 | 8_3:-66596471 | None:intergenic |
| GTTATGAAGCAACCTCTTCT+AGG | 0.314218 | 8_3:+66598394 | Msa1303450:intron |
| TCAGCTCCTGAGCAAGGTTA+CGG | 0.357060 | 8_3:-66598422 | None:intergenic |
| CAGCTCCTGAGCAAGGTTAC+GGG | 0.402541 | 8_3:-66598421 | None:intergenic |
| TACAATACATAACAAGAGTT+TGG | 0.407210 | 8_3:+66596302 | Msa1303450:CDS |
| AGTGTCGGGTACAACGAATC+AGG | 0.458618 | 8_3:-66596495 | None:intergenic |
| GTGTGAAGACGGAGAGTGTC+GGG | 0.469989 | 8_3:-66596509 | None:intergenic |
| GGGTACAACGAATCAGGAAT+AGG | 0.472656 | 8_3:-66596489 | None:intergenic |
| CTTGCTCAGGAGCTGACAAC+GGG | 0.488564 | 8_3:+66598429 | Msa1303450:CDS |
| GAAAACCCGTAACCTTGCTC+AGG | 0.532139 | 8_3:+66598416 | Msa1303450:CDS |
| GGTTTACACTTTGCAGCTGA+AGG | 0.540700 | 8_3:+66596337 | Msa1303450:CDS |
| GCCGATGGCGAGTGTGAAGA+CGG | 0.540900 | 8_3:-66596520 | None:intergenic |
| AAGATCTCAACATTGTATCA+TGG | 0.550972 | 8_3:+66596363 | Msa1303450:CDS |
| AAGTTGACCGGAAAAGTTGA+CGG | 0.552122 | 8_3:+66596268 | None:intergenic |
| ACCGGAAAAGTTGACGGAGA+AGG | 0.579122 | 8_3:+66596274 | Msa1303450:CDS |
| TCCGTCTTCACACTCGCCAT+CGG | 0.584420 | 8_3:+66596519 | Msa1303450:CDS |
| CATACACGCCGCAGGCAAGT+AGG | 0.595577 | 8_3:-66598591 | None:intergenic |
| TAATTAGACATACACGCCGC+AGG | 0.608519 | 8_3:-66598599 | None:intergenic |
| AGTGTGAAGACGGAGAGTGT+CGG | 0.620314 | 8_3:-66596510 | None:intergenic |
| CCTTGCTCAGGAGCTGACAA+CGG | 0.634515 | 8_3:+66598428 | Msa1303450:CDS |
| ACACGCCGCAGGCAAGTAGG+AGG | 0.637336 | 8_3:-66598588 | None:intergenic |
| AGAGTTTGGTCTGAGTGTGG+TGG | 0.649328 | 8_3:+66596316 | Msa1303450:CDS |
| AGAAAGAAGCGGTTAAGATG+AGG | 0.655175 | 8_3:-66596542 | None:intergenic |
| AGCGGTTAAGATGAGGCCGA+TGG | 0.664489 | 8_3:-66596535 | None:intergenic |
| GACATACATGAAGAAAGAAG+CGG | 0.684632 | 8_3:-66596553 | None:intergenic |
| TTGTTCCTCCTACTTGCCTG+CGG | 0.688683 | 8_3:+66598583 | Msa1303450:CDS |
| ACAAGAGTTTGGTCTGAGTG+TGG | 0.702750 | 8_3:+66596313 | Msa1303450:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATTAAGTTTAAATGAGAT+CGG | - | chr8_3:66596579-66596598 | None:intergenic | 15.0% |
| !!! | TAATTTTTTTAGTTCAAACA+GGG | - | chr8_3:66597027-66597046 | None:intergenic | 15.0% |
| !!! | TTAATTTTTTTAGTTCAAAC+AGG | - | chr8_3:66597028-66597047 | None:intergenic | 15.0% |
| !!! | TAAATTGATAATAATACGAT+GGG | - | chr8_3:66597069-66597088 | None:intergenic | 15.0% |
| !!! | TTAAATTGATAATAATACGA+TGG | - | chr8_3:66597070-66597089 | None:intergenic | 15.0% |
| !! | AAATTAAGTTTAAATGAGAT+CGG | - | chr8_3:66596579-66596598 | None:intergenic | 15.0% |
| !!! | TAATTTTTTTAGTTCAAACA+GGG | - | chr8_3:66597027-66597046 | None:intergenic | 15.0% |
| !!! | TTAATTTTTTTAGTTCAAAC+AGG | - | chr8_3:66597028-66597047 | None:intergenic | 15.0% |
| !!! | TAAATTGATAATAATACGAT+GGG | - | chr8_3:66597069-66597088 | None:intergenic | 15.0% |
| !!! | TTAAATTGATAATAATACGA+TGG | - | chr8_3:66597070-66597089 | None:intergenic | 15.0% |
| !! | AATTAAGTTTAAATGAGATC+GGG | - | chr8_3:66596578-66596597 | None:intergenic | 20.0% |
| !! | TACAAATTGTGCAATTAAAT+CGG | - | chr8_3:66596617-66596636 | None:intergenic | 20.0% |
| !! | GTGAATATTGTTAAATGAAA+TGG | + | chr8_3:66596913-66596932 | Msa1303450:intron | 20.0% |
| !! | AAAAAAAAAAAACGAACCTT+TGG | + | chr8_3:66597092-66597111 | Msa1303450:intron | 20.0% |
| !! | AAAAAAAAAAACGAACCTTT+GGG | + | chr8_3:66597093-66597112 | Msa1303450:intron | 20.0% |
| !!! | GAGCAATTTTATTTATTTTC+AGG | - | chr8_3:66597773-66597792 | None:intergenic | 20.0% |
| !!! | TGGAATTGATTTAATACAAT+TGG | + | chr8_3:66597917-66597936 | Msa1303450:intron | 20.0% |
| !! | TCTCAATTAAGATATGTTTA+TGG | + | chr8_3:66598017-66598036 | Msa1303450:intron | 20.0% |
| !!! | ATATTTTTGTGACATATTAC+TGG | + | chr8_3:66598243-66598262 | Msa1303450:intron | 20.0% |
| !! | AATTAAGTTTAAATGAGATC+GGG | - | chr8_3:66596578-66596597 | None:intergenic | 20.0% |
| !! | TACAAATTGTGCAATTAAAT+CGG | - | chr8_3:66596617-66596636 | None:intergenic | 20.0% |
| !! | GTGAATATTGTTAAATGAAA+TGG | + | chr8_3:66596913-66596932 | Msa1303450:intron | 20.0% |
| !! | AAAAAAAAAAAACGAACCTT+TGG | + | chr8_3:66597092-66597111 | Msa1303450:intron | 20.0% |
| !! | AAAAAAAAAAACGAACCTTT+GGG | + | chr8_3:66597093-66597112 | Msa1303450:intron | 20.0% |
| !!! | GAGCAATTTTATTTATTTTC+AGG | - | chr8_3:66597773-66597792 | None:intergenic | 20.0% |
| !!! | TGGAATTGATTTAATACAAT+TGG | + | chr8_3:66597917-66597936 | Msa1303450:intron | 20.0% |
| !! | TCTCAATTAAGATATGTTTA+TGG | + | chr8_3:66598017-66598036 | Msa1303450:intron | 20.0% |
| !!! | ATATTTTTGTGACATATTAC+TGG | + | chr8_3:66598243-66598262 | Msa1303450:intron | 20.0% |
| ! | TACAATACATAACAAGAGTT+TGG | + | chr8_3:66596302-66596321 | Msa1303450:CDS | 25.0% |
| !!! | TATTTGTTTTTGTATGTGGA+AGG | + | chr8_3:66596446-66596465 | Msa1303450:intron | 25.0% |
| !!! | TTAAACTTAATTTGCTTGCA+TGG | + | chr8_3:66596586-66596605 | Msa1303450:intron | 25.0% |
| ! | TTTGGACTTTGGATATTTAA+TGG | + | chr8_3:66596877-66596896 | Msa1303450:intron | 25.0% |
| ! | AAAAAAAAAACGAACCTTTG+GGG | + | chr8_3:66597094-66597113 | Msa1303450:intron | 25.0% |
| !! | TTTTGTAATGTATTAGCGAT+GGG | + | chr8_3:66597940-66597959 | Msa1303450:intron | 25.0% |
| ! | GAGAAACTATCATAAACTAT+AGG | - | chr8_3:66598001-66598020 | None:intergenic | 25.0% |
| !!! | TGAAACTTTTAAGAGATAAG+AGG | + | chr8_3:66598279-66598298 | Msa1303450:intron | 25.0% |
| ! | TACAATACATAACAAGAGTT+TGG | + | chr8_3:66596302-66596321 | Msa1303450:CDS | 25.0% |
| !!! | TATTTGTTTTTGTATGTGGA+AGG | + | chr8_3:66596446-66596465 | Msa1303450:intron | 25.0% |
| !!! | TTAAACTTAATTTGCTTGCA+TGG | + | chr8_3:66596586-66596605 | Msa1303450:intron | 25.0% |
| ! | TTTGGACTTTGGATATTTAA+TGG | + | chr8_3:66596877-66596896 | Msa1303450:intron | 25.0% |
| ! | AAAAAAAAAACGAACCTTTG+GGG | + | chr8_3:66597094-66597113 | Msa1303450:intron | 25.0% |
| !! | TTTTGTAATGTATTAGCGAT+GGG | + | chr8_3:66597940-66597959 | Msa1303450:intron | 25.0% |
| ! | GAGAAACTATCATAAACTAT+AGG | - | chr8_3:66598001-66598020 | None:intergenic | 25.0% |
| !!! | TGAAACTTTTAAGAGATAAG+AGG | + | chr8_3:66598279-66598298 | Msa1303450:intron | 25.0% |
| AAGATCTCAACATTGTATCA+TGG | + | chr8_3:66596363-66596382 | Msa1303450:CDS | 30.0% | |
| !!! | TGCGTATTTGTTTTTGTATG+TGG | + | chr8_3:66596442-66596461 | Msa1303450:intron | 30.0% |
| AAATTGTTTCGTTTGGACTT+TGG | + | chr8_3:66596866-66596885 | Msa1303450:intron | 30.0% | |
| TTTGGATATTTAATGGAGAG+TGG | + | chr8_3:66596884-66596903 | Msa1303450:intron | 30.0% | |
| AAATCTCCTTGTGTTCAAAT+TGG | + | chr8_3:66596960-66596979 | Msa1303450:intron | 30.0% | |
| ATTCATCCAATTTGAACACA+AGG | - | chr8_3:66596969-66596988 | None:intergenic | 30.0% | |
| TTGTGTTCAAATTGGATGAA+TGG | + | chr8_3:66596968-66596987 | Msa1303450:intron | 30.0% | |
| !!! | TTTTTTTAGTTCAAACAGGG+TGG | - | chr8_3:66597024-66597043 | None:intergenic | 30.0% |
| !! | AGGGACTAATTAAGTTGAAT+GGG | - | chr8_3:66597201-66597220 | None:intergenic | 30.0% |
| !! | AAGGGACTAATTAAGTTGAA+TGG | - | chr8_3:66597202-66597221 | None:intergenic | 30.0% |
| TTTACCGTATCATTTACTGA+AGG | + | chr8_3:66597302-66597321 | Msa1303450:intron | 30.0% | |
| TTACCGTATCATTTACTGAA+GGG | + | chr8_3:66597303-66597322 | Msa1303450:intron | 30.0% | |
| ! | AAACTTCTAAAGGTGGAATA+GGG | - | chr8_3:66597556-66597575 | None:intergenic | 30.0% |
| !! | ATAATCTCTAAAGTCTACGA+GGG | - | chr8_3:66597607-66597626 | None:intergenic | 30.0% |
| ! | TCGTAGACTTTAGAGATTAT+GGG | + | chr8_3:66597607-66597626 | Msa1303450:intron | 30.0% |
| ! | GAAAACTACACAACGTTTTT+AGG | - | chr8_3:66597718-66597737 | None:intergenic | 30.0% |
| TTGCTTCATGAGATAACAAA+GGG | - | chr8_3:66597832-66597851 | None:intergenic | 30.0% | |
| TTTGCTTCATGAGATAACAA+AGG | - | chr8_3:66597833-66597852 | None:intergenic | 30.0% | |
| ATATGTATGAAATGTGACAC+TGG | + | chr8_3:66597893-66597912 | Msa1303450:intron | 30.0% | |
| ! | GTTTTGTAATGTATTAGCGA+TGG | + | chr8_3:66597939-66597958 | Msa1303450:intron | 30.0% |
| TTGTTTGAAAAGAAGCTACA+TGG | + | chr8_3:66598082-66598101 | Msa1303450:intron | 30.0% | |
| ! | TTTTTGTGACATATTACTGG+AGG | + | chr8_3:66598246-66598265 | Msa1303450:intron | 30.0% |
| !! | TGATTTGTGCTGTGAAATTT+TGG | + | chr8_3:66598307-66598326 | Msa1303450:intron | 30.0% |
| ACATGATACTGGTATAACAT+TGG | + | chr8_3:66598515-66598534 | Msa1303450:intron | 30.0% | |
| AAGATCTCAACATTGTATCA+TGG | + | chr8_3:66596363-66596382 | Msa1303450:CDS | 30.0% | |
| !!! | TGCGTATTTGTTTTTGTATG+TGG | + | chr8_3:66596442-66596461 | Msa1303450:intron | 30.0% |
| AAATTGTTTCGTTTGGACTT+TGG | + | chr8_3:66596866-66596885 | Msa1303450:intron | 30.0% | |
| TTTGGATATTTAATGGAGAG+TGG | + | chr8_3:66596884-66596903 | Msa1303450:intron | 30.0% | |
| AAATCTCCTTGTGTTCAAAT+TGG | + | chr8_3:66596960-66596979 | Msa1303450:intron | 30.0% | |
| ATTCATCCAATTTGAACACA+AGG | - | chr8_3:66596969-66596988 | None:intergenic | 30.0% | |
| TTGTGTTCAAATTGGATGAA+TGG | + | chr8_3:66596968-66596987 | Msa1303450:intron | 30.0% | |
| !!! | TTTTTTTAGTTCAAACAGGG+TGG | - | chr8_3:66597024-66597043 | None:intergenic | 30.0% |
| !! | AGGGACTAATTAAGTTGAAT+GGG | - | chr8_3:66597201-66597220 | None:intergenic | 30.0% |
| !! | AAGGGACTAATTAAGTTGAA+TGG | - | chr8_3:66597202-66597221 | None:intergenic | 30.0% |
| TTTACCGTATCATTTACTGA+AGG | + | chr8_3:66597302-66597321 | Msa1303450:intron | 30.0% | |
| TTACCGTATCATTTACTGAA+GGG | + | chr8_3:66597303-66597322 | Msa1303450:intron | 30.0% | |
| ! | AAACTTCTAAAGGTGGAATA+GGG | - | chr8_3:66597556-66597575 | None:intergenic | 30.0% |
| !! | ATAATCTCTAAAGTCTACGA+GGG | - | chr8_3:66597607-66597626 | None:intergenic | 30.0% |
| ! | TCGTAGACTTTAGAGATTAT+GGG | + | chr8_3:66597607-66597626 | Msa1303450:intron | 30.0% |
| ! | GAAAACTACACAACGTTTTT+AGG | - | chr8_3:66597718-66597737 | None:intergenic | 30.0% |
| TTGCTTCATGAGATAACAAA+GGG | - | chr8_3:66597832-66597851 | None:intergenic | 30.0% | |
| TTTGCTTCATGAGATAACAA+AGG | - | chr8_3:66597833-66597852 | None:intergenic | 30.0% | |
| ATATGTATGAAATGTGACAC+TGG | + | chr8_3:66597893-66597912 | Msa1303450:intron | 30.0% | |
| ! | GTTTTGTAATGTATTAGCGA+TGG | + | chr8_3:66597939-66597958 | Msa1303450:intron | 30.0% |
| TTGTTTGAAAAGAAGCTACA+TGG | + | chr8_3:66598082-66598101 | Msa1303450:intron | 30.0% | |
| ! | TTTTTGTGACATATTACTGG+AGG | + | chr8_3:66598246-66598265 | Msa1303450:intron | 30.0% |
| !! | TGATTTGTGCTGTGAAATTT+TGG | + | chr8_3:66598307-66598326 | Msa1303450:intron | 30.0% |
| ACATGATACTGGTATAACAT+TGG | + | chr8_3:66598515-66598534 | Msa1303450:intron | 30.0% | |
| GACATACATGAAGAAAGAAG+CGG | - | chr8_3:66596556-66596575 | None:intergenic | 35.0% | |
| ! | GATCTAGTAACTGTTTCTTG+AGG | + | chr8_3:66596655-66596674 | Msa1303450:intron | 35.0% |
| ! | TAACTGTTTCTTGAGGTTCA+TGG | + | chr8_3:66596662-66596681 | Msa1303450:intron | 35.0% |
| AGAGAACGTTAATGTAGAGT+AGG | + | chr8_3:66596824-66596843 | Msa1303450:intron | 35.0% | |
| TAGAGTAGGTATCTTCTTCA+CGG | + | chr8_3:66596838-66596857 | Msa1303450:intron | 35.0% | |
| GTTCAAATTGGATGAATGGA+TGG | + | chr8_3:66596972-66596991 | Msa1303450:intron | 35.0% | |
| AAATTGGATGAATGGATGGA+TGG | + | chr8_3:66596976-66596995 | Msa1303450:intron | 35.0% | |
| TTTGCTGAAAAGGAATGGAA+TGG | - | chr8_3:66597130-66597149 | None:intergenic | 35.0% | |
| !! | TTTGGTTTGCTGAAAAGGAA+TGG | - | chr8_3:66597135-66597154 | None:intergenic | 35.0% |
| ! | ATTCCTTTTCAGCAAACCAA+AGG | + | chr8_3:66597134-66597153 | Msa1303450:intron | 35.0% |
| !! | TTTCCTTTGGTTTGCTGAAA+AGG | - | chr8_3:66597140-66597159 | None:intergenic | 35.0% |
| ! | AAGTCGATGAGATTTTCCTT+TGG | - | chr8_3:66597153-66597172 | None:intergenic | 35.0% |
| !! | AAGGAAAATCTCATCGACTT+TGG | + | chr8_3:66597153-66597172 | Msa1303450:intron | 35.0% |
| !! | AGGAAAATCTCATCGACTTT+GGG | + | chr8_3:66597154-66597173 | Msa1303450:intron | 35.0% |
| TGGTTAACAAGGGGATAAAA+GGG | - | chr8_3:66597220-66597239 | None:intergenic | 35.0% | |
| TTGTGAACACTACCTATACA+GGG | - | chr8_3:66597349-66597368 | None:intergenic | 35.0% | |
| ATTGTGAACACTACCTATAC+AGG | - | chr8_3:66597350-66597369 | None:intergenic | 35.0% | |
| !! | GCTGATAGTGGAGTATATAT+AGG | - | chr8_3:66597412-66597431 | None:intergenic | 35.0% |
| ! | CAAACTTCTAAAGGTGGAAT+AGG | - | chr8_3:66597557-66597576 | None:intergenic | 35.0% |
| !! | CATAATCTCTAAAGTCTACG+AGG | - | chr8_3:66597608-66597627 | None:intergenic | 35.0% |
| ! | CTCGTAGACTTTAGAGATTA+TGG | + | chr8_3:66597606-66597625 | Msa1303450:intron | 35.0% |
| ! | CTTTAGAGATTATGGGCTTT+AGG | + | chr8_3:66597614-66597633 | Msa1303450:intron | 35.0% |
| AGCATGTGTCATGTACTTAT+TGG | + | chr8_3:66597663-66597682 | Msa1303450:intron | 35.0% | |
| ACAATTTGTAGAGCTTCCAT+TGG | + | chr8_3:66597691-66597710 | Msa1303450:intron | 35.0% | |
| !!! | TGAAAGGGTGCTTTTTTGTA+AGG | + | chr8_3:66597864-66597883 | Msa1303450:intron | 35.0% |
| ACTATAGGCTAATCCAAACT+AGG | - | chr8_3:66597986-66598005 | None:intergenic | 35.0% | |
| AATAGTCCTTACAAGCTGAT+CGG | + | chr8_3:66598054-66598073 | Msa1303450:intron | 35.0% | |
| GCTATTGTTTGAAAAAGCTC+AGG | + | chr8_3:66598143-66598162 | Msa1303450:intron | 35.0% | |
| ! | AGCAATTGCATCAGTTTTCT+TGG | + | chr8_3:66598452-66598471 | Msa1303450:CDS | 35.0% |
| GTCATTGTTTGACATGATAC+TGG | + | chr8_3:66598504-66598523 | Msa1303450:intron | 35.0% | |
| GACATACATGAAGAAAGAAG+CGG | - | chr8_3:66596556-66596575 | None:intergenic | 35.0% | |
| ! | GATCTAGTAACTGTTTCTTG+AGG | + | chr8_3:66596655-66596674 | Msa1303450:intron | 35.0% |
| ! | TAACTGTTTCTTGAGGTTCA+TGG | + | chr8_3:66596662-66596681 | Msa1303450:intron | 35.0% |
| AGAGAACGTTAATGTAGAGT+AGG | + | chr8_3:66596824-66596843 | Msa1303450:intron | 35.0% | |
| TAGAGTAGGTATCTTCTTCA+CGG | + | chr8_3:66596838-66596857 | Msa1303450:intron | 35.0% | |
| GTTCAAATTGGATGAATGGA+TGG | + | chr8_3:66596972-66596991 | Msa1303450:intron | 35.0% | |
| AAATTGGATGAATGGATGGA+TGG | + | chr8_3:66596976-66596995 | Msa1303450:intron | 35.0% | |
| TTTGCTGAAAAGGAATGGAA+TGG | - | chr8_3:66597130-66597149 | None:intergenic | 35.0% | |
| !! | TTTGGTTTGCTGAAAAGGAA+TGG | - | chr8_3:66597135-66597154 | None:intergenic | 35.0% |
| ! | ATTCCTTTTCAGCAAACCAA+AGG | + | chr8_3:66597134-66597153 | Msa1303450:intron | 35.0% |
| !! | TTTCCTTTGGTTTGCTGAAA+AGG | - | chr8_3:66597140-66597159 | None:intergenic | 35.0% |
| ! | AAGTCGATGAGATTTTCCTT+TGG | - | chr8_3:66597153-66597172 | None:intergenic | 35.0% |
| !! | AAGGAAAATCTCATCGACTT+TGG | + | chr8_3:66597153-66597172 | Msa1303450:intron | 35.0% |
| !! | AGGAAAATCTCATCGACTTT+GGG | + | chr8_3:66597154-66597173 | Msa1303450:intron | 35.0% |
| TGGTTAACAAGGGGATAAAA+GGG | - | chr8_3:66597220-66597239 | None:intergenic | 35.0% | |
| TTGTGAACACTACCTATACA+GGG | - | chr8_3:66597349-66597368 | None:intergenic | 35.0% | |
| ATTGTGAACACTACCTATAC+AGG | - | chr8_3:66597350-66597369 | None:intergenic | 35.0% | |
| !! | GCTGATAGTGGAGTATATAT+AGG | - | chr8_3:66597412-66597431 | None:intergenic | 35.0% |
| ! | CAAACTTCTAAAGGTGGAAT+AGG | - | chr8_3:66597557-66597576 | None:intergenic | 35.0% |
| !! | CATAATCTCTAAAGTCTACG+AGG | - | chr8_3:66597608-66597627 | None:intergenic | 35.0% |
| ! | CTCGTAGACTTTAGAGATTA+TGG | + | chr8_3:66597606-66597625 | Msa1303450:intron | 35.0% |
| ! | CTTTAGAGATTATGGGCTTT+AGG | + | chr8_3:66597614-66597633 | Msa1303450:intron | 35.0% |
| AGCATGTGTCATGTACTTAT+TGG | + | chr8_3:66597663-66597682 | Msa1303450:intron | 35.0% | |
| ACAATTTGTAGAGCTTCCAT+TGG | + | chr8_3:66597691-66597710 | Msa1303450:intron | 35.0% | |
| !!! | TGAAAGGGTGCTTTTTTGTA+AGG | + | chr8_3:66597864-66597883 | Msa1303450:intron | 35.0% |
| ACTATAGGCTAATCCAAACT+AGG | - | chr8_3:66597986-66598005 | None:intergenic | 35.0% | |
| AATAGTCCTTACAAGCTGAT+CGG | + | chr8_3:66598054-66598073 | Msa1303450:intron | 35.0% | |
| GCTATTGTTTGAAAAAGCTC+AGG | + | chr8_3:66598143-66598162 | Msa1303450:intron | 35.0% | |
| ! | AGCAATTGCATCAGTTTTCT+TGG | + | chr8_3:66598452-66598471 | Msa1303450:CDS | 35.0% |
| GTCATTGTTTGACATGATAC+TGG | + | chr8_3:66598504-66598523 | Msa1303450:intron | 35.0% | |
| AGAAAGAAGCGGTTAAGATG+AGG | - | chr8_3:66596545-66596564 | None:intergenic | 40.0% | |
| TGACGATTGTGTGTCAATTG+TGG | + | chr8_3:66596706-66596725 | Msa1303450:intron | 40.0% | |
| GACGATTGTGTGTCAATTGT+GGG | + | chr8_3:66596707-66596726 | Msa1303450:intron | 40.0% | |
| ! | GGTGCTGAAATTGTTTCGTT+TGG | + | chr8_3:66596859-66596878 | Msa1303450:intron | 40.0% |
| !! | TGGAGTTGTTTCTCCATTGT+CGG | + | chr8_3:66596933-66596952 | Msa1303450:intron | 40.0% |
| ! | AGGAGATTTTCTTCCGACAA+TGG | - | chr8_3:66596949-66596968 | None:intergenic | 40.0% |
| !! | GGAAAATCTCATCGACTTTG+GGG | + | chr8_3:66597155-66597174 | Msa1303450:intron | 40.0% |
| CTGGTTAACAAGGGGATAAA+AGG | - | chr8_3:66597221-66597240 | None:intergenic | 40.0% | |
| ! | CACACTGTTTGTTACCCAAA+CGG | + | chr8_3:66597256-66597275 | Msa1303450:intron | 40.0% |
| CCTTAGTGTTATGACCGTTT+GGG | - | chr8_3:66597273-66597292 | None:intergenic | 40.0% | |
| TCCTTAGTGTTATGACCGTT+TGG | - | chr8_3:66597274-66597293 | None:intergenic | 40.0% | |
| GGACCCTTCAGTAAATGATA+CGG | - | chr8_3:66597309-66597328 | None:intergenic | 40.0% | |
| TATCATTTACTGAAGGGTCC+TGG | + | chr8_3:66597309-66597328 | Msa1303450:intron | 40.0% | |
| ! | TACTGAGATGGCATTGGAAA+GGG | - | chr8_3:66597513-66597532 | None:intergenic | 40.0% |
| TAAAGGTGGAATAGGGATAG+AGG | - | chr8_3:66597549-66597568 | None:intergenic | 40.0% | |
| ! | CCAGATCAAACTTCTAAAGG+TGG | - | chr8_3:66597563-66597582 | None:intergenic | 40.0% |
| ! | CCACCTTTAGAAGTTTGATC+TGG | + | chr8_3:66597560-66597579 | Msa1303450:intron | 40.0% |
| GCACCAGATCAAACTTCTAA+AGG | - | chr8_3:66597566-66597585 | None:intergenic | 40.0% | |
| !! | AGATTATGGGCTTTAGGACT+AGG | + | chr8_3:66597620-66597639 | Msa1303450:intron | 40.0% |
| !!! | CACAACGTTTTTAGGTCCAA+TGG | - | chr8_3:66597710-66597729 | None:intergenic | 40.0% |
| TCATGAAGCAAAGCTGATTG+CGG | + | chr8_3:66597841-66597860 | Msa1303450:intron | 40.0% | |
| GTATGAAATGTGACACTGGA+TGG | + | chr8_3:66597897-66597916 | Msa1303450:intron | 40.0% | |
| TAGGCTAATCCAAACTAGGT+CGG | - | chr8_3:66597982-66598001 | None:intergenic | 40.0% | |
| ! | GCTTGTAAGGACTATTTCTC+AGG | - | chr8_3:66598050-66598069 | None:intergenic | 40.0% |
| GTTATGAAGCAACCTCTTCT+AGG | + | chr8_3:66598394-66598413 | Msa1303450:intron | 40.0% | |
| TGTGAAGAAGATCAAGACAC+AGG | - | chr8_3:66598550-66598569 | None:intergenic | 40.0% | |
| TGTGTCTTGATCTTCTTCAC+AGG | + | chr8_3:66598549-66598568 | Msa1303450:intron | 40.0% | |
| GTGTCTTGATCTTCTTCACA+GGG | + | chr8_3:66598550-66598569 | Msa1303450:intron | 40.0% | |
| ! | TGATCTTCTTCACAGGGTTT+TGG | + | chr8_3:66598556-66598575 | Msa1303450:intron | 40.0% |
| ! | GATCTTCTTCACAGGGTTTT+GGG | + | chr8_3:66598557-66598576 | Msa1303450:intron | 40.0% |
| AGAAAGAAGCGGTTAAGATG+AGG | - | chr8_3:66596545-66596564 | None:intergenic | 40.0% | |
| TGACGATTGTGTGTCAATTG+TGG | + | chr8_3:66596706-66596725 | Msa1303450:intron | 40.0% | |
| GACGATTGTGTGTCAATTGT+GGG | + | chr8_3:66596707-66596726 | Msa1303450:intron | 40.0% | |
| ! | GGTGCTGAAATTGTTTCGTT+TGG | + | chr8_3:66596859-66596878 | Msa1303450:intron | 40.0% |
| !! | TGGAGTTGTTTCTCCATTGT+CGG | + | chr8_3:66596933-66596952 | Msa1303450:intron | 40.0% |
| ! | AGGAGATTTTCTTCCGACAA+TGG | - | chr8_3:66596949-66596968 | None:intergenic | 40.0% |
| !! | GGAAAATCTCATCGACTTTG+GGG | + | chr8_3:66597155-66597174 | Msa1303450:intron | 40.0% |
| CTGGTTAACAAGGGGATAAA+AGG | - | chr8_3:66597221-66597240 | None:intergenic | 40.0% | |
| ! | CACACTGTTTGTTACCCAAA+CGG | + | chr8_3:66597256-66597275 | Msa1303450:intron | 40.0% |
| CCTTAGTGTTATGACCGTTT+GGG | - | chr8_3:66597273-66597292 | None:intergenic | 40.0% | |
| TCCTTAGTGTTATGACCGTT+TGG | - | chr8_3:66597274-66597293 | None:intergenic | 40.0% | |
| GGACCCTTCAGTAAATGATA+CGG | - | chr8_3:66597309-66597328 | None:intergenic | 40.0% | |
| TATCATTTACTGAAGGGTCC+TGG | + | chr8_3:66597309-66597328 | Msa1303450:intron | 40.0% | |
| ! | TACTGAGATGGCATTGGAAA+GGG | - | chr8_3:66597513-66597532 | None:intergenic | 40.0% |
| TAAAGGTGGAATAGGGATAG+AGG | - | chr8_3:66597549-66597568 | None:intergenic | 40.0% | |
| ! | CCAGATCAAACTTCTAAAGG+TGG | - | chr8_3:66597563-66597582 | None:intergenic | 40.0% |
| ! | CCACCTTTAGAAGTTTGATC+TGG | + | chr8_3:66597560-66597579 | Msa1303450:intron | 40.0% |
| GCACCAGATCAAACTTCTAA+AGG | - | chr8_3:66597566-66597585 | None:intergenic | 40.0% | |
| !! | AGATTATGGGCTTTAGGACT+AGG | + | chr8_3:66597620-66597639 | Msa1303450:intron | 40.0% |
| !!! | CACAACGTTTTTAGGTCCAA+TGG | - | chr8_3:66597710-66597729 | None:intergenic | 40.0% |
| TCATGAAGCAAAGCTGATTG+CGG | + | chr8_3:66597841-66597860 | Msa1303450:intron | 40.0% | |
| GTATGAAATGTGACACTGGA+TGG | + | chr8_3:66597897-66597916 | Msa1303450:intron | 40.0% | |
| TAGGCTAATCCAAACTAGGT+CGG | - | chr8_3:66597982-66598001 | None:intergenic | 40.0% | |
| ! | GCTTGTAAGGACTATTTCTC+AGG | - | chr8_3:66598050-66598069 | None:intergenic | 40.0% |
| GTTATGAAGCAACCTCTTCT+AGG | + | chr8_3:66598394-66598413 | Msa1303450:intron | 40.0% | |
| TGTGAAGAAGATCAAGACAC+AGG | - | chr8_3:66598550-66598569 | None:intergenic | 40.0% | |
| TGTGTCTTGATCTTCTTCAC+AGG | + | chr8_3:66598549-66598568 | Msa1303450:intron | 40.0% | |
| GTGTCTTGATCTTCTTCACA+GGG | + | chr8_3:66598550-66598569 | Msa1303450:intron | 40.0% | |
| ! | TGATCTTCTTCACAGGGTTT+TGG | + | chr8_3:66598556-66598575 | Msa1303450:intron | 40.0% |
| ! | GATCTTCTTCACAGGGTTTT+GGG | + | chr8_3:66598557-66598576 | Msa1303450:intron | 40.0% |
| ! | TCCTTCTCCGTCAACTTTTC+CGG | - | chr8_3:66596278-66596297 | None:intergenic | 45.0% |
| ACAAGAGTTTGGTCTGAGTG+TGG | + | chr8_3:66596313-66596332 | Msa1303450:CDS | 45.0% | |
| GGTTTACACTTTGCAGCTGA+AGG | + | chr8_3:66596337-66596356 | Msa1303450:CDS | 45.0% | |
| GGGTACAACGAATCAGGAAT+AGG | - | chr8_3:66596492-66596511 | None:intergenic | 45.0% | |
| GGATGAATGGATGGATGGAA+TGG | + | chr8_3:66596981-66597000 | Msa1303450:intron | 45.0% | |
| !! | ACCTGTGCACTGGTTAACAA+GGG | - | chr8_3:66597230-66597249 | None:intergenic | 45.0% |
| CCCAAACGGTCATAACACTA+AGG | + | chr8_3:66597270-66597289 | Msa1303450:intron | 45.0% | |
| CACTACCTATACAGGGATCT+GGG | - | chr8_3:66597342-66597361 | None:intergenic | 45.0% | |
| ACACTACCTATACAGGGATC+TGG | - | chr8_3:66597343-66597362 | None:intergenic | 45.0% | |
| GAAATGTGGTAGGCTGATAG+TGG | - | chr8_3:66597424-66597443 | None:intergenic | 45.0% | |
| ! | TGGGTATAAGAGCATGTGTG+GGG | - | chr8_3:66597449-66597468 | None:intergenic | 45.0% |
| ! | GTGGGTATAAGAGCATGTGT+GGG | - | chr8_3:66597450-66597469 | None:intergenic | 45.0% |
| ! | AGTGGGTATAAGAGCATGTG+TGG | - | chr8_3:66597451-66597470 | None:intergenic | 45.0% |
| CACATGCTCTTATACCCACT+CGG | + | chr8_3:66597451-66597470 | Msa1303450:intron | 45.0% | |
| ! | TTTGTTATCCACCACCGAGT+GGG | - | chr8_3:66597468-66597487 | None:intergenic | 45.0% |
| ! | ACTGAGATGGCATTGGAAAG+GGG | - | chr8_3:66597512-66597531 | None:intergenic | 45.0% |
| ! | CTACTGAGATGGCATTGGAA+AGG | - | chr8_3:66597514-66597533 | None:intergenic | 45.0% |
| CTTTCCAATGCCATCTCAGT+AGG | + | chr8_3:66597512-66597531 | Msa1303450:intron | 45.0% | |
| CTAAAGTCTACGAGGGAATG+AGG | - | chr8_3:66597600-66597619 | None:intergenic | 45.0% | |
| CAAAGCTGATTGCGGTGAAA+GGG | + | chr8_3:66597849-66597868 | Msa1303450:intron | 45.0% | |
| !!! | AGGGTGCTTTTTTGTAAGGC+TGG | + | chr8_3:66597868-66597887 | Msa1303450:intron | 45.0% |
| !!! | GGGTGCTTTTTTGTAAGGCT+GGG | + | chr8_3:66597869-66597888 | Msa1303450:intron | 45.0% |
| AACGTTTACCCGACCTAGTT+TGG | + | chr8_3:66597970-66597989 | Msa1303450:intron | 45.0% | |
| AGGCTAATCCAAACTAGGTC+GGG | - | chr8_3:66597981-66598000 | None:intergenic | 45.0% | |
| ACAACACCGATCAGCTTGTA+AGG | - | chr8_3:66598063-66598082 | None:intergenic | 45.0% | |
| ! | GTTACGGGTTTTCCTAGAAG+AGG | - | chr8_3:66598409-66598428 | None:intergenic | 45.0% |
| ! | TCCTTCTCCGTCAACTTTTC+CGG | - | chr8_3:66596278-66596297 | None:intergenic | 45.0% |
| ACAAGAGTTTGGTCTGAGTG+TGG | + | chr8_3:66596313-66596332 | Msa1303450:CDS | 45.0% | |
| GGTTTACACTTTGCAGCTGA+AGG | + | chr8_3:66596337-66596356 | Msa1303450:CDS | 45.0% | |
| GGGTACAACGAATCAGGAAT+AGG | - | chr8_3:66596492-66596511 | None:intergenic | 45.0% | |
| GGATGAATGGATGGATGGAA+TGG | + | chr8_3:66596981-66597000 | Msa1303450:intron | 45.0% | |
| !! | ACCTGTGCACTGGTTAACAA+GGG | - | chr8_3:66597230-66597249 | None:intergenic | 45.0% |
| CCCAAACGGTCATAACACTA+AGG | + | chr8_3:66597270-66597289 | Msa1303450:intron | 45.0% | |
| CACTACCTATACAGGGATCT+GGG | - | chr8_3:66597342-66597361 | None:intergenic | 45.0% | |
| ACACTACCTATACAGGGATC+TGG | - | chr8_3:66597343-66597362 | None:intergenic | 45.0% | |
| GAAATGTGGTAGGCTGATAG+TGG | - | chr8_3:66597424-66597443 | None:intergenic | 45.0% | |
| ! | TGGGTATAAGAGCATGTGTG+GGG | - | chr8_3:66597449-66597468 | None:intergenic | 45.0% |
| ! | GTGGGTATAAGAGCATGTGT+GGG | - | chr8_3:66597450-66597469 | None:intergenic | 45.0% |
| ! | AGTGGGTATAAGAGCATGTG+TGG | - | chr8_3:66597451-66597470 | None:intergenic | 45.0% |
| CACATGCTCTTATACCCACT+CGG | + | chr8_3:66597451-66597470 | Msa1303450:intron | 45.0% | |
| ! | TTTGTTATCCACCACCGAGT+GGG | - | chr8_3:66597468-66597487 | None:intergenic | 45.0% |
| ! | ACTGAGATGGCATTGGAAAG+GGG | - | chr8_3:66597512-66597531 | None:intergenic | 45.0% |
| ! | CTACTGAGATGGCATTGGAA+AGG | - | chr8_3:66597514-66597533 | None:intergenic | 45.0% |
| CTTTCCAATGCCATCTCAGT+AGG | + | chr8_3:66597512-66597531 | Msa1303450:intron | 45.0% | |
| CTAAAGTCTACGAGGGAATG+AGG | - | chr8_3:66597600-66597619 | None:intergenic | 45.0% | |
| CAAAGCTGATTGCGGTGAAA+GGG | + | chr8_3:66597849-66597868 | Msa1303450:intron | 45.0% | |
| !!! | AGGGTGCTTTTTTGTAAGGC+TGG | + | chr8_3:66597868-66597887 | Msa1303450:intron | 45.0% |
| !!! | GGGTGCTTTTTTGTAAGGCT+GGG | + | chr8_3:66597869-66597888 | Msa1303450:intron | 45.0% |
| AACGTTTACCCGACCTAGTT+TGG | + | chr8_3:66597970-66597989 | Msa1303450:intron | 45.0% | |
| AGGCTAATCCAAACTAGGTC+GGG | - | chr8_3:66597981-66598000 | None:intergenic | 45.0% | |
| ACAACACCGATCAGCTTGTA+AGG | - | chr8_3:66598063-66598082 | None:intergenic | 45.0% | |
| ! | GTTACGGGTTTTCCTAGAAG+AGG | - | chr8_3:66598409-66598428 | None:intergenic | 45.0% |
| ACCGGAAAAGTTGACGGAGA+AGG | + | chr8_3:66596274-66596293 | Msa1303450:CDS | 50.0% | |
| AGAGTTTGGTCTGAGTGTGG+TGG | + | chr8_3:66596316-66596335 | Msa1303450:CDS | 50.0% | |
| ! | ATAGGACTCGCGATCGCTTT+TGG | - | chr8_3:66596474-66596493 | None:intergenic | 50.0% |
| ! | AGTGTCGGGTACAACGAATC+AGG | - | chr8_3:66596498-66596517 | None:intergenic | 50.0% |
| ! | AGTGTGAAGACGGAGAGTGT+CGG | - | chr8_3:66596513-66596532 | None:intergenic | 50.0% |
| ATGGAGTGAGATTGCCCCAA+AGG | - | chr8_3:66597111-66597130 | None:intergenic | 50.0% | |
| !! | CCTGTGCACTGGTTAACAAG+GGG | - | chr8_3:66597229-66597248 | None:intergenic | 50.0% |
| !! | CACCTGTGCACTGGTTAACA+AGG | - | chr8_3:66597231-66597250 | None:intergenic | 50.0% |
| TGTTAACCAGTGCACAGGTG+AGG | + | chr8_3:66597231-66597250 | Msa1303450:intron | 50.0% | |
| AACAGCCCAGATCCCTGTAT+AGG | + | chr8_3:66597334-66597353 | Msa1303450:intron | 50.0% | |
| ATGCTCTTATACCCACTCGG+TGG | + | chr8_3:66597454-66597473 | Msa1303450:intron | 50.0% | |
| !! | GTTTGTTATCCACCACCGAG+TGG | - | chr8_3:66597469-66597488 | None:intergenic | 50.0% |
| TCCAATGCCATCTCAGTAGG+CGG | + | chr8_3:66597515-66597534 | Msa1303450:intron | 50.0% | |
| GGAATAACCGCCTACTGAGA+TGG | - | chr8_3:66597525-66597544 | None:intergenic | 50.0% | |
| AGGTGGAATAGGGATAGAGG+TGG | - | chr8_3:66597546-66597565 | None:intergenic | 50.0% | |
| GTCTACGAGGGAATGAGGAA+AGG | - | chr8_3:66597595-66597614 | None:intergenic | 50.0% | |
| GCAAAGCTGATTGCGGTGAA+AGG | + | chr8_3:66597848-66597867 | Msa1303450:intron | 50.0% | |
| GAAAACCCGTAACCTTGCTC+AGG | + | chr8_3:66598416-66598435 | Msa1303450:CDS | 50.0% | |
| TCAGCTCCTGAGCAAGGTTA+CGG | - | chr8_3:66598425-66598444 | None:intergenic | 50.0% | |
| TTGTTCCTCCTACTTGCCTG+CGG | + | chr8_3:66598583-66598602 | Msa1303450:CDS | 50.0% | |
| ACCGGAAAAGTTGACGGAGA+AGG | + | chr8_3:66596274-66596293 | Msa1303450:CDS | 50.0% | |
| AGAGTTTGGTCTGAGTGTGG+TGG | + | chr8_3:66596316-66596335 | Msa1303450:CDS | 50.0% | |
| ! | ATAGGACTCGCGATCGCTTT+TGG | - | chr8_3:66596474-66596493 | None:intergenic | 50.0% |
| ! | AGTGTCGGGTACAACGAATC+AGG | - | chr8_3:66596498-66596517 | None:intergenic | 50.0% |
| ! | AGTGTGAAGACGGAGAGTGT+CGG | - | chr8_3:66596513-66596532 | None:intergenic | 50.0% |
| ATGGAGTGAGATTGCCCCAA+AGG | - | chr8_3:66597111-66597130 | None:intergenic | 50.0% | |
| !! | CCTGTGCACTGGTTAACAAG+GGG | - | chr8_3:66597229-66597248 | None:intergenic | 50.0% |
| !! | CACCTGTGCACTGGTTAACA+AGG | - | chr8_3:66597231-66597250 | None:intergenic | 50.0% |
| TGTTAACCAGTGCACAGGTG+AGG | + | chr8_3:66597231-66597250 | Msa1303450:intron | 50.0% | |
| AACAGCCCAGATCCCTGTAT+AGG | + | chr8_3:66597334-66597353 | Msa1303450:intron | 50.0% | |
| ATGCTCTTATACCCACTCGG+TGG | + | chr8_3:66597454-66597473 | Msa1303450:intron | 50.0% | |
| !! | GTTTGTTATCCACCACCGAG+TGG | - | chr8_3:66597469-66597488 | None:intergenic | 50.0% |
| TCCAATGCCATCTCAGTAGG+CGG | + | chr8_3:66597515-66597534 | Msa1303450:intron | 50.0% | |
| GGAATAACCGCCTACTGAGA+TGG | - | chr8_3:66597525-66597544 | None:intergenic | 50.0% | |
| AGGTGGAATAGGGATAGAGG+TGG | - | chr8_3:66597546-66597565 | None:intergenic | 50.0% | |
| GTCTACGAGGGAATGAGGAA+AGG | - | chr8_3:66597595-66597614 | None:intergenic | 50.0% | |
| GCAAAGCTGATTGCGGTGAA+AGG | + | chr8_3:66597848-66597867 | Msa1303450:intron | 50.0% | |
| GAAAACCCGTAACCTTGCTC+AGG | + | chr8_3:66598416-66598435 | Msa1303450:CDS | 50.0% | |
| TCAGCTCCTGAGCAAGGTTA+CGG | - | chr8_3:66598425-66598444 | None:intergenic | 50.0% | |
| TTGTTCCTCCTACTTGCCTG+CGG | + | chr8_3:66598583-66598602 | Msa1303450:CDS | 50.0% | |
| !! | GTGTGAAGACGGAGAGTGTC+GGG | - | chr8_3:66596512-66596531 | None:intergenic | 55.0% |
| TCCGTCTTCACACTCGCCAT+CGG | + | chr8_3:66596519-66596538 | Msa1303450:CDS | 55.0% | |
| AGCGGTTAAGATGAGGCCGA+TGG | - | chr8_3:66596538-66596557 | None:intergenic | 55.0% | |
| CCCCTTGTTAACCAGTGCAC+AGG | + | chr8_3:66597226-66597245 | Msa1303450:intron | 55.0% | |
| GTGTGGGGCTGAAATGTGGT+AGG | - | chr8_3:66597434-66597453 | None:intergenic | 55.0% | |
| GCATGTGTGGGGCTGAAATG+TGG | - | chr8_3:66597438-66597457 | None:intergenic | 55.0% | |
| ! | CTCTTATACCCACTCGGTGG+TGG | + | chr8_3:66597457-66597476 | Msa1303450:intron | 55.0% |
| ACCGCCTACTGAGATGGCAT+TGG | - | chr8_3:66597519-66597538 | None:intergenic | 55.0% | |
| CAGCTCCTGAGCAAGGTTAC+GGG | - | chr8_3:66598424-66598443 | None:intergenic | 55.0% | |
| CCTTGCTCAGGAGCTGACAA+CGG | + | chr8_3:66598428-66598447 | Msa1303450:CDS | 55.0% | |
| CTTGCTCAGGAGCTGACAAC+GGG | + | chr8_3:66598429-66598448 | Msa1303450:CDS | 55.0% | |
| !! | GTGTGAAGACGGAGAGTGTC+GGG | - | chr8_3:66596512-66596531 | None:intergenic | 55.0% |
| TCCGTCTTCACACTCGCCAT+CGG | + | chr8_3:66596519-66596538 | Msa1303450:CDS | 55.0% | |
| AGCGGTTAAGATGAGGCCGA+TGG | - | chr8_3:66596538-66596557 | None:intergenic | 55.0% | |
| CCCCTTGTTAACCAGTGCAC+AGG | + | chr8_3:66597226-66597245 | Msa1303450:intron | 55.0% | |
| GTGTGGGGCTGAAATGTGGT+AGG | - | chr8_3:66597434-66597453 | None:intergenic | 55.0% | |
| GCATGTGTGGGGCTGAAATG+TGG | - | chr8_3:66597438-66597457 | None:intergenic | 55.0% | |
| ! | CTCTTATACCCACTCGGTGG+TGG | + | chr8_3:66597457-66597476 | Msa1303450:intron | 55.0% |
| ACCGCCTACTGAGATGGCAT+TGG | - | chr8_3:66597519-66597538 | None:intergenic | 55.0% | |
| CAGCTCCTGAGCAAGGTTAC+GGG | - | chr8_3:66598424-66598443 | None:intergenic | 55.0% | |
| CCTTGCTCAGGAGCTGACAA+CGG | + | chr8_3:66598428-66598447 | Msa1303450:CDS | 55.0% | |
| CTTGCTCAGGAGCTGACAAC+GGG | + | chr8_3:66598429-66598448 | Msa1303450:CDS | 55.0% | |
| GCCGATGGCGAGTGTGAAGA+CGG | - | chr8_3:66596523-66596542 | None:intergenic | 60.0% | |
| TGTGCTCCTCACCTGTGCAC+TGG | - | chr8_3:66597240-66597259 | None:intergenic | 60.0% | |
| AGGGATCTGGGCTGTTCTCC+AGG | - | chr8_3:66597330-66597349 | None:intergenic | 60.0% | |
| CCGTTGTCAGCTCCTGAGCA+AGG | - | chr8_3:66598431-66598450 | None:intergenic | 60.0% | |
| CATACACGCCGCAGGCAAGT+AGG | - | chr8_3:66598594-66598613 | None:intergenic | 60.0% | |
| GCCGATGGCGAGTGTGAAGA+CGG | - | chr8_3:66596523-66596542 | None:intergenic | 60.0% | |
| TGTGCTCCTCACCTGTGCAC+TGG | - | chr8_3:66597240-66597259 | None:intergenic | 60.0% | |
| AGGGATCTGGGCTGTTCTCC+AGG | - | chr8_3:66597330-66597349 | None:intergenic | 60.0% | |
| CCGTTGTCAGCTCCTGAGCA+AGG | - | chr8_3:66598431-66598450 | None:intergenic | 60.0% | |
| CATACACGCCGCAGGCAAGT+AGG | - | chr8_3:66598594-66598613 | None:intergenic | 60.0% | |
| ACACGCCGCAGGCAAGTAGG+AGG | - | chr8_3:66598591-66598610 | None:intergenic | 65.0% | |
| ACACGCCGCAGGCAAGTAGG+AGG | - | chr8_3:66598591-66598610 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 66596271 | 66598618 | 66596271 | ID=Msa1303450;Name=Msa1303450 |
| chr8_3 | mRNA | 66596271 | 66598618 | 66596271 | ID=Msa1303450-mRNA-1;Parent=Msa1303450;Name=Msa1303450-mRNA-1;_AED=0.61;_eAED=0.61;_QI=0|0|0|1|1|0.75|4|0|113 |
| chr8_3 | exon | 66596271 | 66596384 | 66596271 | ID=Msa1303450-mRNA-1:exon:20260;Parent=Msa1303450-mRNA-1 |
| chr8_3 | exon | 66596468 | 66596568 | 66596468 | ID=Msa1303450-mRNA-1:exon:20261;Parent=Msa1303450-mRNA-1 |
| chr8_3 | exon | 66598395 | 66598473 | 66598395 | ID=Msa1303450-mRNA-1:exon:20262;Parent=Msa1303450-mRNA-1 |
| chr8_3 | exon | 66598571 | 66598618 | 66598571 | ID=Msa1303450-mRNA-1:exon:20263;Parent=Msa1303450-mRNA-1 |
| chr8_3 | CDS | 66596271 | 66596384 | 66596271 | ID=Msa1303450-mRNA-1:cds;Parent=Msa1303450-mRNA-1 |
| chr8_3 | CDS | 66596468 | 66596568 | 66596468 | ID=Msa1303450-mRNA-1:cds;Parent=Msa1303450-mRNA-1 |
| chr8_3 | CDS | 66598395 | 66598473 | 66598395 | ID=Msa1303450-mRNA-1:cds;Parent=Msa1303450-mRNA-1 |
| chr8_3 | CDS | 66598571 | 66598618 | 66598571 | ID=Msa1303450-mRNA-1:cds;Parent=Msa1303450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
