Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979730 | XP_013451415.1 | 95.495 | 222 | 10 | 0 | 1 | 222 | 1 | 222 | 3.80e-156 | 441 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979730 | A0A072UI29 | 95.495 | 222 | 10 | 0 | 1 | 222 | 1 | 222 | 1.82e-156 | 441 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006500 | Msa0979730 | 0.802591 | 5.217809e-49 | -8.615850e-47 |
| Msa0008110 | Msa0979730 | 0.804983 | 1.662159e-49 | -8.615850e-47 |
| Msa0014990 | Msa0979730 | 0.832848 | 7.477226e-56 | -8.615850e-47 |
| Msa0017510 | Msa0979730 | 0.809076 | 2.262807e-50 | -8.615850e-47 |
| Msa0021500 | Msa0979730 | 0.818665 | 1.741336e-52 | -8.615850e-47 |
| Msa0028420 | Msa0979730 | 0.811715 | 6.094689e-51 | -8.615850e-47 |
| Msa0029270 | Msa0979730 | 0.801692 | 7.984662e-49 | -8.615850e-47 |
| Msa0032090 | Msa0979730 | 0.813443 | 2.552548e-51 | -8.615850e-47 |
| Msa0032430 | Msa0979730 | 0.847181 | 1.359986e-59 | -8.615850e-47 |
| Msa0032960 | Msa0979730 | -0.809180 | 2.149607e-50 | -8.615850e-47 |
| Msa0034270 | Msa0979730 | 0.806703 | 7.230265e-50 | -8.615850e-47 |
| Msa0036870 | Msa0979730 | 0.829141 | 6.077628e-55 | -8.615850e-47 |
| Msa0042610 | Msa0979730 | 0.818932 | 1.513774e-52 | -8.615850e-47 |
| Msa0047030 | Msa0979730 | 0.839523 | 1.506417e-57 | -8.615850e-47 |
| Msa0079380 | Msa0979730 | 0.821320 | 4.298337e-53 | -8.615850e-47 |
| Msa0089630 | Msa0979730 | 0.838004 | 3.719078e-57 | -8.615850e-47 |
| Msa0094120 | Msa0979730 | 0.825473 | 4.599594e-54 | -8.615850e-47 |
| Msa0101700 | Msa0979730 | 0.809457 | 1.874608e-50 | -8.615850e-47 |
| Msa0115080 | Msa0979730 | 0.804622 | 1.977753e-49 | -8.615850e-47 |
| Msa0116850 | Msa0979730 | 0.805233 | 1.473726e-49 | -8.615850e-47 |
| Msa0607050 | Msa0979730 | 0.830056 | 3.640594e-55 | -8.615850e-47 |
| Msa0615710 | Msa0979730 | 0.815995 | 6.947713e-52 | -8.615850e-47 |
| Msa0625720 | Msa0979730 | 0.813772 | 2.161488e-51 | -8.615850e-47 |
| Msa0639430 | Msa0979730 | 0.803057 | 4.180072e-49 | -8.615850e-47 |
| Msa0650020 | Msa0979730 | 0.826023 | 3.405058e-54 | -8.615850e-47 |
| Msa0655560 | Msa0979730 | 0.803740 | 3.017270e-49 | -8.615850e-47 |
| Msa0663390 | Msa0979730 | 0.813608 | 2.348532e-51 | -8.615850e-47 |
| Msa0677410 | Msa0979730 | 0.826787 | 2.239677e-54 | -8.615850e-47 |
| Msa0682330 | Msa0979730 | 0.818783 | 1.636717e-52 | -8.615850e-47 |
| Msa0689520 | Msa0979730 | 0.825375 | 4.851151e-54 | -8.615850e-47 |
| Msa0690150 | Msa0979730 | 0.834025 | 3.804131e-56 | -8.615850e-47 |
| Msa0691980 | Msa0979730 | 0.816851 | 4.467970e-52 | -8.615850e-47 |
| Msa0693370 | Msa0979730 | 0.818779 | 1.640114e-52 | -8.615850e-47 |
| Msa0696450 | Msa0979730 | 0.808937 | 2.422593e-50 | -8.615850e-47 |
| Msa0709400 | Msa0979730 | 0.853809 | 1.869901e-61 | -8.615850e-47 |
| Msa0730430 | Msa0979730 | 0.836449 | 9.299200e-57 | -8.615850e-47 |
| Msa0741240 | Msa0979730 | 0.807115 | 5.918453e-50 | -8.615850e-47 |
| Msa0741840 | Msa0979730 | 0.813069 | 3.083883e-51 | -8.615850e-47 |
| Msa0742380 | Msa0979730 | 0.800125 | 1.668559e-48 | -8.615850e-47 |
| Msa0744000 | Msa0979730 | 0.806331 | 8.665257e-50 | -8.615850e-47 |
| Msa0765910 | Msa0979730 | 0.800155 | 1.645399e-48 | -8.615850e-47 |
| Msa0770720 | Msa0979730 | 0.817522 | 3.157274e-52 | -8.615850e-47 |
| Msa0806790 | Msa0979730 | 0.827356 | 1.636749e-54 | -8.615850e-47 |
| Msa0824960 | Msa0979730 | 0.810628 | 1.048679e-50 | -8.615850e-47 |
| Msa0122040 | Msa0979730 | 0.815655 | 8.272953e-52 | -8.615850e-47 |
| Msa0122890 | Msa0979730 | 0.804394 | 2.206265e-49 | -8.615850e-47 |
| Msa0124060 | Msa0979730 | 0.815896 | 7.308846e-52 | -8.615850e-47 |
| Msa0127050 | Msa0979730 | 0.801564 | 8.484084e-49 | -8.615850e-47 |
| Msa0145440 | Msa0979730 | 0.812532 | 4.043059e-51 | -8.615850e-47 |
| Msa0146040 | Msa0979730 | 0.802432 | 5.625990e-49 | -8.615850e-47 |
| Msa0157290 | Msa0979730 | 0.809246 | 2.080158e-50 | -8.615850e-47 |
| Msa0166700 | Msa0979730 | 0.809812 | 1.572547e-50 | -8.615850e-47 |
| Msa0167610 | Msa0979730 | 0.813600 | 2.357541e-51 | -8.615850e-47 |
| Msa0168500 | Msa0979730 | 0.825914 | 3.615219e-54 | -8.615850e-47 |
| Msa0169310 | Msa0979730 | 0.807242 | 5.562748e-50 | -8.615850e-47 |
| Msa0172070 | Msa0979730 | 0.843285 | 1.539533e-58 | -8.615850e-47 |
| Msa0172450 | Msa0979730 | 0.800098 | 1.690345e-48 | -8.615850e-47 |
| Msa0175780 | Msa0979730 | 0.820318 | 7.306688e-53 | -8.615850e-47 |
| Msa0178560 | Msa0979730 | 0.802036 | 6.786641e-49 | -8.615850e-47 |
| Msa0189290 | Msa0979730 | 0.834748 | 2.505392e-56 | -8.615850e-47 |
| Msa0189320 | Msa0979730 | 0.809817 | 1.568676e-50 | -8.615850e-47 |
| Msa0211150 | Msa0979730 | 0.824404 | 8.220911e-54 | -8.615850e-47 |
| Msa0223080 | Msa0979730 | 0.800028 | 1.746050e-48 | -8.615850e-47 |
| Msa0225740 | Msa0979730 | 0.829673 | 4.512816e-55 | -8.615850e-47 |
| Msa0229230 | Msa0979730 | 0.818710 | 1.700595e-52 | -8.615850e-47 |
| Msa0231650 | Msa0979730 | 0.837904 | 3.946984e-57 | -8.615850e-47 |
| Msa0366240 | Msa0979730 | 0.804106 | 2.533393e-49 | -8.615850e-47 |
| Msa0379770 | Msa0979730 | 0.820464 | 6.763982e-53 | -8.615850e-47 |
| Msa0386090 | Msa0979730 | 0.802596 | 5.204776e-49 | -8.615850e-47 |
| Msa0386850 | Msa0979730 | 0.810932 | 9.015365e-51 | -8.615850e-47 |
| Msa0391030 | Msa0979730 | 0.803987 | 2.681401e-49 | -8.615850e-47 |
| Msa0402650 | Msa0979730 | 0.861833 | 7.772422e-64 | -8.615850e-47 |
| Msa0403950 | Msa0979730 | 0.801902 | 7.232015e-49 | -8.615850e-47 |
| Msa0403970 | Msa0979730 | 0.809525 | 1.812401e-50 | -8.615850e-47 |
| Msa0408400 | Msa0979730 | 0.811809 | 5.812946e-51 | -8.615850e-47 |
| Msa0411160 | Msa0979730 | 0.805104 | 1.568130e-49 | -8.615850e-47 |
| Msa0411190 | Msa0979730 | 0.817967 | 2.505437e-52 | -8.615850e-47 |
| Msa0417880 | Msa0979730 | 0.808151 | 3.566135e-50 | -8.615850e-47 |
| Msa0424790 | Msa0979730 | 0.803842 | 2.873968e-49 | -8.615850e-47 |
| Msa0428080 | Msa0979730 | 0.804929 | 1.706062e-49 | -8.615850e-47 |
| Msa0428150 | Msa0979730 | 0.818564 | 1.835472e-52 | -8.615850e-47 |
| Msa0428590 | Msa0979730 | 0.803185 | 3.933108e-49 | -8.615850e-47 |
| Msa0432080 | Msa0979730 | 0.812182 | 4.821233e-51 | -8.615850e-47 |
| Msa0436050 | Msa0979730 | 0.821473 | 3.962611e-53 | -8.615850e-47 |
| Msa0462500 | Msa0979730 | 0.828566 | 8.370149e-55 | -8.615850e-47 |
| Msa0464380 | Msa0979730 | 0.802285 | 6.031113e-49 | -8.615850e-47 |
| Msa0467490 | Msa0979730 | 0.824451 | 8.014943e-54 | -8.615850e-47 |
| Msa0474520 | Msa0979730 | 0.820236 | 7.629130e-53 | -8.615850e-47 |
| Msa0479170 | Msa0979730 | 0.818563 | 1.836680e-52 | -8.615850e-47 |
| Msa0481530 | Msa0979730 | 0.810406 | 1.170907e-50 | -8.615850e-47 |
| Msa0979730 | Msa0994950 | 0.866822 | 2.153173e-65 | -8.615850e-47 |
| Msa0979730 | Msa1004840 | 0.814890 | 1.223465e-51 | -8.615850e-47 |
| Msa0979730 | Msa1013400 | 0.826807 | 2.214891e-54 | -8.615850e-47 |
| Msa0979730 | Msa1045140 | 0.813179 | 2.918120e-51 | -8.615850e-47 |
| Msa0979730 | Msa1051880 | 0.806175 | 9.347142e-50 | -8.615850e-47 |
| Msa0979730 | Msa1065390 | 0.807624 | 4.614874e-50 | -8.615850e-47 |
| Msa0979730 | Msa1081150 | 0.811836 | 5.737072e-51 | -8.615850e-47 |
| Msa0979730 | Msa1081980 | 0.841601 | 4.305322e-58 | -8.615850e-47 |
| Msa0979730 | Msa1082810 | 0.801975 | 6.985990e-49 | -8.615850e-47 |
| Msa0979730 | Msa1084960 | 0.841758 | 3.912719e-58 | -8.615850e-47 |
| Msa0979730 | Msa1093530 | 0.810230 | 1.278076e-50 | -8.615850e-47 |
| Msa0979730 | Msa1111090 | 0.837402 | 5.310697e-57 | -8.615850e-47 |
| Msa0979730 | Msa1124960 | 0.850418 | 1.720057e-60 | -8.615850e-47 |
| Msa0979730 | Msa1142020 | 0.837763 | 4.290673e-57 | -8.615850e-47 |
| Msa0979730 | Msa1162270 | 0.803851 | 2.862362e-49 | -8.615850e-47 |
| Msa0979730 | Msa1209460 | 0.845424 | 4.095938e-59 | -8.615850e-47 |
| Msa0979730 | Msa1225700 | 0.820116 | 8.131480e-53 | -8.615850e-47 |
| Msa0979730 | Msa1229500 | 0.801815 | 7.534578e-49 | -8.615850e-47 |
| Msa0979730 | Msa1271990 | 0.823305 | 1.487469e-53 | -8.615850e-47 |
| Msa0979730 | Msa1279380 | 0.809513 | 1.823466e-50 | -8.615850e-47 |
| Msa0979730 | Msa1296760 | 0.800850 | 1.187884e-48 | -8.615850e-47 |
| Msa0979730 | Msa1298820 | 0.808312 | 3.294400e-50 | -8.615850e-47 |
| Msa0979730 | Msa1303450 | 0.810598 | 1.064573e-50 | -8.615850e-47 |
| Msa0979730 | Msa1309790 | 0.810205 | 1.294383e-50 | -8.615850e-47 |
| Msa0979730 | Msa1320410 | 0.815894 | 7.316540e-52 | -8.615850e-47 |
| Msa0979730 | Msa1330410 | 0.827659 | 1.384346e-54 | -8.615850e-47 |
| Msa0979730 | Msa1353980 | 0.804522 | 2.074580e-49 | -8.615850e-47 |
| Msa0979730 | Msa1366600 | 0.810106 | 1.359519e-50 | -8.615850e-47 |
| Msa0979730 | Msa1367370 | 0.801054 | 1.078845e-48 | -8.615850e-47 |
| Msa0979730 | Msa1370010 | 0.821210 | 4.558478e-53 | -8.615850e-47 |
| Msa0979730 | Msa1372230 | 0.818195 | 2.225198e-52 | -8.615850e-47 |
| Msa0979730 | Msa1374120 | 0.822724 | 2.032614e-53 | -8.615850e-47 |
| Msa0979730 | Msa1375170 | 0.811733 | 6.041092e-51 | -8.615850e-47 |
| Msa0979730 | Msa1382620 | 0.825826 | 3.792962e-54 | -8.615850e-47 |
| Msa0979730 | Msa1391770 | 0.810445 | 1.148401e-50 | -8.615850e-47 |
| Msa0979730 | Msa1392240 | 0.802587 | 5.226420e-49 | -8.615850e-47 |
| Msa0979730 | Msa1398340 | 0.804561 | 2.036044e-49 | -8.615850e-47 |
| Msa0979730 | Msa1409700 | 0.800688 | 1.281376e-48 | -8.615850e-47 |
| Msa0979730 | Msa1413690 | 0.821558 | 3.788705e-53 | -8.615850e-47 |
| Msa0979730 | Msa1424750 | 0.800687 | 1.282512e-48 | -8.615850e-47 |
| Msa0979730 | Msa1435890 | 0.808259 | 3.381579e-50 | -8.615850e-47 |
| Msa0979730 | Msa1440560 | 0.810284 | 1.244259e-50 | -8.615850e-47 |
| Msa0979730 | Msa1442820 | 0.818434 | 1.964442e-52 | -8.615850e-47 |
| Msa0979730 | Msa1443110 | 0.807813 | 4.208724e-50 | -8.615850e-47 |
| Msa0979730 | Msa1452240 | 0.801386 | 9.225734e-49 | -8.615850e-47 |
| Msa0979730 | Msa1454140 | 0.826155 | 3.168644e-54 | -8.615850e-47 |
| Msa0979730 | Msa1457440 | 0.805502 | 1.294221e-49 | -8.615850e-47 |
| Msa0979730 | Msa1457910 | 0.838035 | 3.652455e-57 | -8.615850e-47 |
| Msa0979730 | Msa1464810 | 0.853848 | 1.822130e-61 | -8.615850e-47 |
| Msa0979730 | Msa1465440 | 0.809559 | 1.782110e-50 | -8.615850e-47 |
| Msa0240110 | Msa0979730 | 0.820910 | 5.342605e-53 | -8.615850e-47 |
| Msa0240150 | Msa0979730 | 0.823869 | 1.098113e-53 | -8.615850e-47 |
| Msa0243100 | Msa0979730 | 0.800624 | 1.320520e-48 | -8.615850e-47 |
| Msa0255090 | Msa0979730 | 0.802236 | 6.172921e-49 | -8.615850e-47 |
| Msa0259380 | Msa0979730 | 0.802055 | 6.725533e-49 | -8.615850e-47 |
| Msa0260610 | Msa0979730 | 0.812536 | 4.035715e-51 | -8.615850e-47 |
| Msa0260670 | Msa0979730 | 0.816819 | 4.542246e-52 | -8.615850e-47 |
| Msa0271510 | Msa0979730 | 0.802935 | 4.429511e-49 | -8.615850e-47 |
| Msa0272490 | Msa0979730 | 0.800758 | 1.240438e-48 | -8.615850e-47 |
| Msa0292330 | Msa0979730 | 0.832067 | 1.168134e-55 | -8.615850e-47 |
| Msa0295540 | Msa0979730 | 0.804025 | 2.633463e-49 | -8.615850e-47 |
| Msa0309770 | Msa0979730 | 0.820624 | 6.215567e-53 | -8.615850e-47 |
| Msa0312700 | Msa0979730 | 0.804337 | 2.267079e-49 | -8.615850e-47 |
| Msa0334550 | Msa0979730 | 0.861396 | 1.057010e-63 | -8.615850e-47 |
| Msa0340090 | Msa0979730 | 0.821759 | 3.403333e-53 | -8.615850e-47 |
| Msa0497490 | Msa0979730 | 0.814518 | 1.478895e-51 | -8.615850e-47 |
| Msa0501460 | Msa0979730 | 0.841125 | 5.745236e-58 | -8.615850e-47 |
| Msa0520890 | Msa0979730 | 0.826516 | 2.599261e-54 | -8.615850e-47 |
| Msa0523270 | Msa0979730 | 0.838819 | 2.292119e-57 | -8.615850e-47 |
| Msa0524190 | Msa0979730 | 0.803573 | 3.268073e-49 | -8.615850e-47 |
| Msa0529890 | Msa0979730 | 0.809699 | 1.663376e-50 | -8.615850e-47 |
| Msa0532070 | Msa0979730 | 0.815438 | 9.244929e-52 | -8.615850e-47 |
| Msa0546680 | Msa0979730 | 0.826803 | 2.219548e-54 | -8.615850e-47 |
| Msa0548170 | Msa0979730 | 0.809846 | 1.546328e-50 | -8.615850e-47 |
| Msa0563560 | Msa0979730 | 0.809155 | 2.176216e-50 | -8.615850e-47 |
| Msa0565960 | Msa0979730 | 0.817046 | 4.040204e-52 | -8.615850e-47 |
| Msa0569200 | Msa0979730 | 0.859629 | 3.623093e-63 | -8.615850e-47 |
| Msa0578040 | Msa0979730 | 0.813626 | 2.327543e-51 | -8.615850e-47 |
| Msa0585560 | Msa0979730 | 0.806220 | 9.143891e-50 | -8.615850e-47 |
| Msa0602310 | Msa0979730 | 0.803690 | 3.091176e-49 | -8.615850e-47 |
| Msa0861870 | Msa0979730 | 0.808556 | 2.922854e-50 | -8.615850e-47 |
| Msa0864300 | Msa0979730 | 0.804206 | 2.414319e-49 | -8.615850e-47 |
| Msa0871270 | Msa0979730 | 0.815366 | 9.593556e-52 | -8.615850e-47 |
| Msa0876200 | Msa0979730 | 0.813324 | 2.711755e-51 | -8.615850e-47 |
| Msa0876660 | Msa0979730 | 0.800921 | 1.148451e-48 | -8.615850e-47 |
| Msa0878500 | Msa0979730 | 0.809929 | 1.483654e-50 | -8.615850e-47 |
| Msa0880020 | Msa0979730 | 0.807620 | 4.623407e-50 | -8.615850e-47 |
| Msa0880140 | Msa0979730 | 0.804127 | 2.507377e-49 | -8.615850e-47 |
| Msa0888580 | Msa0979730 | 0.849533 | 3.042901e-60 | -8.615850e-47 |
| Msa0891710 | Msa0979730 | 0.801406 | 9.142732e-49 | -8.615850e-47 |
| Msa0902760 | Msa0979730 | 0.811536 | 6.665455e-51 | -8.615850e-47 |
| Msa0903250 | Msa0979730 | 0.814302 | 1.651133e-51 | -8.615850e-47 |
| Msa0906200 | Msa0979730 | 0.801815 | 7.536055e-49 | -8.615850e-47 |
| Msa0919770 | Msa0979730 | 0.802032 | 6.800293e-49 | -8.615850e-47 |
| Msa0920640 | Msa0979730 | 0.825956 | 3.532753e-54 | -8.615850e-47 |
| Msa0924450 | Msa0979730 | 0.802843 | 4.628237e-49 | -8.615850e-47 |
| Msa0938220 | Msa0979730 | 0.807926 | 3.980812e-50 | -8.615850e-47 |
| Msa0944190 | Msa0979730 | 0.809304 | 2.022135e-50 | -8.615850e-47 |
| Msa0959140 | Msa0979730 | 0.855046 | 8.205513e-62 | -8.615850e-47 |
| Msa0963270 | Msa0979730 | 0.815885 | 7.349743e-52 | -8.615850e-47 |
| Msa0966400 | Msa0979730 | 0.838911 | 2.169957e-57 | -8.615850e-47 |
| Msa0975340 | Msa0979730 | 0.811917 | 5.507002e-51 | -8.615850e-47 |
| Msa0979010 | Msa0979730 | 0.840850 | 6.782416e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979730 | MtrunA17_Chr6g0459581 | 95.495 | 222 | 10 | 0 | 1 | 222 | 1 | 222 | 3.50e-160 | 441 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0979730 | AT5G02740.1 | 44.910 | 167 | 89 | 2 | 58 | 222 | 63 | 228 | 2.68e-49 | 161 |
| Msa0979730 | AT5G02740.2 | 44.628 | 121 | 65 | 1 | 58 | 176 | 63 | 183 | 1.62e-35 | 124 |
Find 63 sgRNAs with CRISPR-Local
Find 404 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAAAGTTATTATGTTTATT+TGG | 0.111275 | 6_4:-16995387 | Msa0979730:three_prime_UTR |
| GGAATACATTACATTGAAAT+TGG | 0.161036 | 6_4:+16997597 | None:intergenic |
| ATCTTAACCAAGCAATAATT+TGG | 0.214700 | 6_4:-16995286 | Msa0979730:three_prime_UTR |
| GTTGCATTGTTATTCAATTA+AGG | 0.235354 | 6_4:-16995235 | Msa0979730:three_prime_UTR |
| GACTCTGGACGATGTTAAAA+TGG | 0.290012 | 6_4:-16997640 | Msa0979730:CDS |
| AAAAGTTATTATGTTTATTT+GGG | 0.290289 | 6_4:-16995386 | Msa0979730:three_prime_UTR |
| CTTGGTTAAGATTCAAGATA+TGG | 0.293728 | 6_4:+16995297 | None:intergenic |
| GAAGGGTCGTTTGTACAAAT+TGG | 0.308196 | 6_4:-16996801 | Msa0979730:CDS |
| CTTCCGTCAATATGTTTCTA+AGG | 0.313232 | 6_4:-16995692 | Msa0979730:intron |
| GGGTAATGAACCCGTTAAAA+TGG | 0.339380 | 6_4:-16995575 | Msa0979730:CDS |
| AAATGTATTATTGATTGAAT+TGG | 0.344503 | 6_4:-16995195 | Msa0979730:three_prime_UTR |
| CTCTTATCAGGTTTGACATA+TGG | 0.371272 | 6_4:-16997732 | Msa0979730:intron |
| TGTTTAAAATTGTGGCAAAC+TGG | 0.378500 | 6_4:-16995323 | Msa0979730:three_prime_UTR |
| AAGCTCACAATATGCAGATT+TGG | 0.381230 | 6_4:-16995748 | Msa0979730:CDS |
| CAACGATACGTTTCCATTCA+AGG | 0.386311 | 6_4:-16995552 | Msa0979730:CDS |
| GAATACATTACATTGAAATT+GGG | 0.406056 | 6_4:+16997598 | None:intergenic |
| AATGCATTCATTGCAAAGAA+TGG | 0.414470 | 6_4:-16995517 | Msa0979730:CDS |
| AATGTATTATTGATTGAATT+GGG | 0.414854 | 6_4:-16995194 | Msa0979730:three_prime_UTR |
| GATATCATCAACTTCCTTGA+AGG | 0.418807 | 6_4:-16997672 | Msa0979730:CDS |
| TTAGGGTTTATTGTGGAAGA+TGG | 0.436806 | 6_4:-17002061 | Msa0979730:intron |
| TATATACATCACAAGATGAT+AGG | 0.437195 | 6_4:+16995117 | None:intergenic |
| TGAAATGAGAAAAGAAGAGT+AGG | 0.444153 | 6_4:+17002319 | None:intergenic |
| TCATCGCTTGAATCCTTGAA+TGG | 0.457125 | 6_4:+16995539 | None:intergenic |
| AGATGAATCATATTCATAAC+CGG | 0.458720 | 6_4:+16995713 | None:intergenic |
| GAGTCAAATTACAACCTTCA+AGG | 0.464292 | 6_4:+16997658 | None:intergenic |
| TCAATTACCAAATTATTGCT+TGG | 0.466712 | 6_4:+16995279 | None:intergenic |
| ATGCATTCATTGCAAAGAAT+GGG | 0.484499 | 6_4:-16995516 | Msa0979730:CDS |
| CATGAAACTGTTTAAAATTG+TGG | 0.490273 | 6_4:-16995331 | Msa0979730:three_prime_UTR |
| ATGCTATACGCGTGATCGGA+AGG | 0.491267 | 6_4:-16996823 | Msa0979730:CDS |
| GATTTGGATCAGATTGTGTC+CGG | 0.493529 | 6_4:-16995732 | Msa0979730:CDS |
| ATCAGATTGATCGTTCTCAA+TGG | 0.494096 | 6_4:-16996666 | Msa0979730:intron |
| AGTGCATTTCAGAGAAGTAA+TGG | 0.496716 | 6_4:-17001994 | Msa0979730:CDS |
| TCAGATTGATCGTTCTCAAT+GGG | 0.498161 | 6_4:-16996665 | Msa0979730:intron |
| TAGGGTTTATTGTGGAAGAT+GGG | 0.498265 | 6_4:-17002060 | Msa0979730:exon |
| GACAATGCTATACGCGTGAT+CGG | 0.498822 | 6_4:-16996827 | Msa0979730:CDS |
| TGAAGGTTGTAATTTGACTC+TGG | 0.499348 | 6_4:-16997655 | Msa0979730:CDS |
| GTCGTTTGTACAAATTGGAT+AGG | 0.503719 | 6_4:-16996796 | Msa0979730:CDS |
| TCTGCATATTGTGAGCTTCG+TGG | 0.510617 | 6_4:+16995753 | None:intergenic |
| AGGTTTGACATATGGTAGGC+TGG | 0.513333 | 6_4:-16997724 | Msa0979730:CDS |
| CACGCGTATAGCATTGTCAT+AGG | 0.517638 | 6_4:+16996832 | None:intergenic |
| CACAAGATGATAGGTGCCAT+TGG | 0.524564 | 6_4:+16995126 | None:intergenic |
| TTGTCATAGGAACTGTAAGT+AGG | 0.528475 | 6_4:+16996845 | None:intergenic |
| CTTACAGTTCTTCCGTCGTA+AGG | 0.536989 | 6_4:+16996631 | None:intergenic |
| TCTCATGGTGATGGTTCTGT+AGG | 0.541089 | 6_4:-16995439 | Msa0979730:three_prime_UTR |
| TTGACATATGGTAGGCTGGT+TGG | 0.546146 | 6_4:-16997720 | Msa0979730:CDS |
| TCGTTTGTACAAATTGGATA+GGG | 0.546525 | 6_4:-16996795 | Msa0979730:intron |
| TGTCATAGGAACTGTAAGTA+GGG | 0.550774 | 6_4:+16996846 | None:intergenic |
| TATACGCGTGATCGGAAGGA+AGG | 0.555284 | 6_4:-16996819 | Msa0979730:CDS |
| TATCAGGTTTGACATATGGT+AGG | 0.555665 | 6_4:-16997728 | Msa0979730:intron |
| TTACCTTAGAAACATATTGA+CGG | 0.556431 | 6_4:+16995689 | None:intergenic |
| TGTGAATTTAGGGTTTATTG+TGG | 0.569086 | 6_4:-17002068 | Msa0979730:intron |
| TTTCTGCTACGATCGTTCAA+AGG | 0.589096 | 6_4:+17002283 | None:intergenic |
| GTTTGTTTCAGAGCTGGAGA+GGG | 0.593720 | 6_4:-16995595 | Msa0979730:intron |
| TTACAAGACTCTCATGGTGA+TGG | 0.596095 | 6_4:-16995448 | Msa0979730:three_prime_UTR |
| CAGTAATTACAAGACTCTCA+TGG | 0.615518 | 6_4:-16995454 | Msa0979730:exon |
| TGAAGCTGAAAAGCCACCAC+AGG | 0.618962 | 6_4:-17001947 | Msa0979730:CDS |
| GCAGTTGTTGAATCCTGTGG+TGG | 0.622224 | 6_4:+17001934 | None:intergenic |
| TGTTTGTTTCAGAGCTGGAG+AGG | 0.627343 | 6_4:-16995596 | Msa0979730:intron |
| GTATCGAAATGCGATTGTTG+AGG | 0.635754 | 6_4:+16995485 | None:intergenic |
| ATACGCGTGATCGGAAGGAA+GGG | 0.636421 | 6_4:-16996818 | Msa0979730:CDS |
| GTAGCAGTTGTTGAATCCTG+TGG | 0.646615 | 6_4:+17001931 | None:intergenic |
| TGATAGGTGCCATTGGATGA+CGG | 0.683190 | 6_4:+16995133 | None:intergenic |
| GACATCGTTACTCCTTACGA+CGG | 0.725283 | 6_4:-16996643 | Msa0979730:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTAATTTTTTGATATAAAAA+TGG | - | chr6_4:16995241-16995260 | Msa0979730:three_prime_UTR | 10.0% |
| !!! | TTTAAAATATTTTAGTGATT+TGG | - | chr6_4:16995728-16995747 | Msa0979730:CDS | 10.0% |
| !!! | AAAATTCTTTATTTTCTTTA+GGG | - | chr6_4:16997504-16997523 | Msa0979730:intron | 10.0% |
| !!! | AGTATAATTTTACAAATTTA+TGG | - | chr6_4:16999441-16999460 | Msa0979730:intron | 10.0% |
| !! | CTTATATATAAAAAAAAGTT+TGG | + | chr6_4:17000332-17000351 | None:intergenic | 10.0% |
| !!! | TTGATTTTTTATATATATGA+TGG | - | chr6_4:17001263-17001282 | Msa0979730:intron | 10.0% |
| !! | TAAAAGTTATTATGTTTATT+TGG | - | chr6_4:17002026-17002045 | Msa0979730:CDS | 10.0% |
| !! | AAAAGTTATTATGTTTATTT+GGG | - | chr6_4:17002027-17002046 | Msa0979730:CDS | 10.0% |
| !! | ATATTTATGGTGATAAAAAT+GGG | - | chr6_4:16995298-16995317 | Msa0979730:three_prime_UTR | 15.0% |
| !!! | AATTGTTTTAAGAGTTTATT+GGG | - | chr6_4:16995622-16995641 | Msa0979730:intron | 15.0% |
| !!! | TATTTTCTCTTGTTTTAATT+AGG | - | chr6_4:16995818-16995837 | Msa0979730:intron | 15.0% |
| !! | ATTAAAAAATCTTTGTGATT+TGG | - | chr6_4:16996151-16996170 | Msa0979730:intron | 15.0% |
| !!! | GATTGTTATTGTTAATATTA+GGG | - | chr6_4:16996261-16996280 | Msa0979730:intron | 15.0% |
| !!! | ATTTTAAAATATCTGTGATT+TGG | - | chr6_4:16996360-16996379 | Msa0979730:intron | 15.0% |
| !! | AATAAAAAATATCTGTGATT+TGG | - | chr6_4:16996397-16996416 | Msa0979730:intron | 15.0% |
| !!! | TATTTTCTCTTGTTTTAATT+AGG | - | chr6_4:16995818-16995837 | Msa0979730:intron | 15.0% |
| !!! | AACACAAAAAATATAGATTT+TGG | + | chr6_4:16996772-16996791 | None:intergenic | 15.0% |
| !!! | TTTTTTATACTCATTATCAT+AGG | - | chr6_4:16996951-16996970 | Msa0979730:intron | 15.0% |
| !!! | AATTTTTCCATATGATTATT+AGG | - | chr6_4:16997447-16997466 | Msa0979730:intron | 15.0% |
| !!! | GAAAATTCTTTATTTTCTTT+AGG | - | chr6_4:16997503-16997522 | Msa0979730:intron | 15.0% |
| !!! | TTAAACATTTAAAGTATGTT+TGG | - | chr6_4:16997546-16997565 | Msa0979730:intron | 15.0% |
| !! | ATATTTCAATTACACTAAAT+AGG | + | chr6_4:16998415-16998434 | None:intergenic | 15.0% |
| !!! | TATATAGTTTTACAAATGTA+TGG | - | chr6_4:16999015-16999034 | Msa0979730:intron | 15.0% |
| !! | AAAGAGTAAATAATGTTATT+AGG | + | chr6_4:16999613-16999632 | None:intergenic | 15.0% |
| !! | AAAAAAAAATTGATTAGCAA+AGG | + | chr6_4:17000827-17000846 | None:intergenic | 15.0% |
| !!! | ATAAAAAATCAAAGTATCAT+TGG | + | chr6_4:17001255-17001274 | None:intergenic | 15.0% |
| !!! | AAATGTATTATTGATTGAAT+TGG | - | chr6_4:17002218-17002237 | Msa0979730:intron | 15.0% |
| !!! | AATGTATTATTGATTGAATT+GGG | - | chr6_4:17002219-17002238 | Msa0979730:intron | 15.0% |
| !! | TATGAAGCAAAATGAAAATT+GGG | + | chr6_4:16995209-16995228 | None:intergenic | 20.0% |
| !! | ATATGAAGCAAAATGAAAAT+TGG | + | chr6_4:16995210-16995229 | None:intergenic | 20.0% |
| !! | GATATTTATGGTGATAAAAA+TGG | - | chr6_4:16995297-16995316 | Msa0979730:three_prime_UTR | 20.0% |
| !!! | GAATTGTTTTAAGAGTTTAT+TGG | - | chr6_4:16995621-16995640 | Msa0979730:intron | 20.0% |
| !! | TTAAAATTAGTTGTATGACA+TGG | + | chr6_4:16995713-16995732 | None:intergenic | 20.0% |
| !! | TTAAAATTAGTTGTATGACA+TGG | + | chr6_4:16995713-16995732 | None:intergenic | 20.0% |
| !!! | AAAATATCTTTGTGATTTTG+TGG | - | chr6_4:16995945-16995964 | Msa0979730:intron | 20.0% |
| !!! | TATTTTCTCTTGTTCTAATT+AGG | - | chr6_4:16996027-16996046 | Msa0979730:intron | 20.0% |
| !! | TTAATATTATTCGTATGACA+TGG | + | chr6_4:16996136-16996155 | None:intergenic | 20.0% |
| !!! | GGATTGTTATTGTTAATATT+AGG | - | chr6_4:16996260-16996279 | Msa0979730:intron | 20.0% |
| !!! | AAAAATATAGATTTTGGACA+CGG | + | chr6_4:16996766-16996785 | None:intergenic | 20.0% |
| !!! | TCTTTGTATTCCTTTTTTTA+AGG | - | chr6_4:16997067-16997086 | Msa0979730:intron | 20.0% |
| !!! | CTTTGTATTCCTTTTTTTAA+GGG | - | chr6_4:16997068-16997087 | Msa0979730:intron | 20.0% |
| !!! | TAATGTCTTTTACTAAATAG+AGG | - | chr6_4:16997382-16997401 | Msa0979730:intron | 20.0% |
| !! | TATGTTTGGATTGAATAATT+AGG | - | chr6_4:16997560-16997579 | Msa0979730:intron | 20.0% |
| !!! | TTAAACCAATAAAGTGTTTT+GGG | + | chr6_4:16999294-16999313 | None:intergenic | 20.0% |
| !!! | TTTAAACCAATAAAGTGTTT+TGG | + | chr6_4:16999295-16999314 | None:intergenic | 20.0% |
| !! | TAGAATGAAATATAAGCAAA+AGG | - | chr6_4:16999336-16999355 | Msa0979730:intron | 20.0% |
| !! | AGAATGAAATATAAGCAAAA+GGG | - | chr6_4:16999337-16999356 | Msa0979730:intron | 20.0% |
| !! | ACACATAAATATTGAAAACA+AGG | - | chr6_4:16999535-16999554 | Msa0979730:intron | 20.0% |
| !! | GAATACATTACATTGAAATT+GGG | + | chr6_4:16999818-16999837 | None:intergenic | 20.0% |
| !! | TCAAAAAAATAGACAAAAGA+CGG | + | chr6_4:16999840-16999859 | None:intergenic | 20.0% |
| !! | CGTAATGAAAAACTAAATAT+CGG | + | chr6_4:16999985-17000004 | None:intergenic | 20.0% |
| !! | TATAATCATGAAACAGAAAA+AGG | - | chr6_4:17000287-17000306 | Msa0979730:intron | 20.0% |
| !!! | ATTATTTTTTCCCTTTCTAT+TGG | + | chr6_4:17000669-17000688 | None:intergenic | 20.0% |
| !!! | ATTTTTTTCGTTCTTTTCAT+TGG | - | chr6_4:17000723-17000742 | Msa0979730:intron | 20.0% |
| !! | CTGTTAAATAATTCATCAAT+AGG | + | chr6_4:17001085-17001104 | None:intergenic | 20.0% |
| !!! | AGTCAAATTTTTGCTAATAA+GGG | - | chr6_4:17001203-17001222 | Msa0979730:intron | 20.0% |
| !!! | AAATCATTGTTGTTAAATAG+CGG | + | chr6_4:17001535-17001554 | None:intergenic | 20.0% |
| !!! | TTGTTTTGTGATGTGAATTT+AGG | - | chr6_4:16995334-16995353 | Msa0979730:three_prime_UTR | 25.0% |
| !! | TGTTTTGTGATGTGAATTTA+GGG | - | chr6_4:16995335-16995354 | Msa0979730:three_prime_UTR | 25.0% |
| ! | TACAAACAAATCCACAAAAA+GGG | + | chr6_4:16995542-16995561 | None:intergenic | 25.0% |
| ! | ATACAAACAAATCCACAAAA+AGG | + | chr6_4:16995543-16995562 | None:intergenic | 25.0% |
| !! | TGAAAGTTATGTTGGATTTT+TGG | - | chr6_4:16995582-16995601 | Msa0979730:CDS | 25.0% |
| !!! | ATTTTTGGCTTAGTTATTGT+AGG | - | chr6_4:16995597-16995616 | Msa0979730:intron | 25.0% |
| !!! | AGGCTTGTTATTGTTAATAT+TGG | - | chr6_4:16995838-16995857 | Msa0979730:intron | 25.0% |
| !!! | GGCTTGTTATTGTTAATATT+GGG | - | chr6_4:16995839-16995858 | Msa0979730:intron | 25.0% |
| !! | GTAAAACTATTTTACACTGA+TGG | - | chr6_4:16995995-16996014 | Msa0979730:intron | 25.0% |
| ! | TATTGAGAAAATTGCACTTA+CGG | - | chr6_4:16996064-16996083 | Msa0979730:intron | 25.0% |
| !! | AAAAAATCTTTGTGATTTGG+TGG | - | chr6_4:16996154-16996173 | Msa0979730:intron | 25.0% |
| !!! | GATTGTCTCTTGTTTTAATT+AGG | - | chr6_4:16996239-16996258 | Msa0979730:intron | 25.0% |
| ! | TTAAAATTAGTTGTACAGCA+TGG | + | chr6_4:16996347-16996366 | None:intergenic | 25.0% |
| !! | AAAAAATATCTGTGATTTGG+TGG | - | chr6_4:16996400-16996419 | Msa0979730:intron | 25.0% |
| !! | GTAAAACTATTTTACACTGA+CGG | - | chr6_4:16995995-16996014 | Msa0979730:intron | 25.0% |
| !! | AGGATTGTTATTGTTGATAT+TGG | - | chr6_4:16996501-16996520 | Msa0979730:intron | 25.0% |
| !! | GGATTGTTATTGTTGATATT+GGG | - | chr6_4:16996502-16996521 | Msa0979730:intron | 25.0% |
| !! | GATTGTTATTGTTGATATTG+GGG | - | chr6_4:16996503-16996522 | Msa0979730:intron | 25.0% |
| ! | TGTTAGCTCAAAAACTAAAA+GGG | + | chr6_4:16996583-16996602 | None:intergenic | 25.0% |
| ! | ATGTTAGCTCAAAAACTAAA+AGG | + | chr6_4:16996584-16996603 | None:intergenic | 25.0% |
| ! | AAAGTAAAGGATCTATTCTA+AGG | + | chr6_4:16996883-16996902 | None:intergenic | 25.0% |
| ! | CTATTTGTCTCAAAAAGTAA+AGG | + | chr6_4:16996896-16996915 | None:intergenic | 25.0% |
| !!! | TACATACATAATTCTAAGAC+AGG | + | chr6_4:16997013-16997032 | None:intergenic | 25.0% |
| ! | GTCTTAGAATTATGTATGTA+AGG | - | chr6_4:16997013-16997032 | Msa0979730:intron | 25.0% |
| !! | TGATAATGACCCTTAAAAAA+AGG | + | chr6_4:16997080-16997099 | None:intergenic | 25.0% |
| ! | CGTAAATAAGATTATGTATG+TGG | - | chr6_4:16997225-16997244 | Msa0979730:intron | 25.0% |
| !! | TTTTCCATATGATTATTAGG+AGG | - | chr6_4:16997450-16997469 | Msa0979730:intron | 25.0% |
| ! | ATAATTAGGAGGAAAAAGAT+CGG | - | chr6_4:16997574-16997593 | Msa0979730:intron | 25.0% |
| !!! | ATACACAATTTCACTGATTT+AGG | + | chr6_4:16997717-16997736 | None:intergenic | 25.0% |
| ! | ATTCACATAACATAACATCA+TGG | + | chr6_4:16998047-16998066 | None:intergenic | 25.0% |
| !! | TATGAATTTTGTACAATCCT+AGG | - | chr6_4:16998151-16998170 | Msa0979730:intron | 25.0% |
| ! | TCTTCTCCTAAAAATATGTA+AGG | + | chr6_4:16998244-16998263 | None:intergenic | 25.0% |
| ! | ATACAACAGCAATGATTTAA+AGG | + | chr6_4:16998292-16998311 | None:intergenic | 25.0% |
| ! | TTAAGCTATTTATCCAAACA+AGG | - | chr6_4:16998327-16998346 | Msa0979730:intron | 25.0% |
| ! | GAATAACTTAAGAAAGACTT+AGG | + | chr6_4:16998353-16998372 | None:intergenic | 25.0% |
| !! | TTTGATTTAAATAGAACACC+TGG | - | chr6_4:16998465-16998484 | Msa0979730:intron | 25.0% |
| ! | AAATATTGATCACCAATTGT+TGG | - | chr6_4:16998490-16998509 | Msa0979730:intron | 25.0% |
| ! | AATATTGATCACCAATTGTT+GGG | - | chr6_4:16998491-16998510 | Msa0979730:intron | 25.0% |
| ! | GAAAAAAACAGAGAAAATAG+AGG | - | chr6_4:16998669-16998688 | Msa0979730:intron | 25.0% |
| !!! | TTTTTCTCTGTTTTTTAGCT+TGG | + | chr6_4:16998708-16998727 | None:intergenic | 25.0% |
| ! | CTAAAAAACAGAGAAAAAAG+AGG | - | chr6_4:16998710-16998729 | Msa0979730:intron | 25.0% |
| ! | TAAAACCTAAAGCAATTTAG+TGG | - | chr6_4:16998976-16998995 | Msa0979730:intron | 25.0% |
| ! | AAATGTATGGCATTTATCTA+CGG | - | chr6_4:16999028-16999047 | Msa0979730:intron | 25.0% |
| !!! | ACATGTGAATTTTGAAAACA+AGG | - | chr6_4:16999097-16999116 | Msa0979730:intron | 25.0% |
| ! | ATCATCATCATTATCATTGT+TGG | - | chr6_4:16999216-16999235 | Msa0979730:intron | 25.0% |
| ! | TAAAACCCAAAACACTTTAT+TGG | - | chr6_4:16999286-16999305 | Msa0979730:intron | 25.0% |
| ! | TGCTTATATTTCATTCTAGA+GGG | + | chr6_4:16999334-16999353 | None:intergenic | 25.0% |
| ! | TTGCTTATATTTCATTCTAG+AGG | + | chr6_4:16999335-16999354 | None:intergenic | 25.0% |
| ! | GAATGAAATATAAGCAAAAG+GGG | - | chr6_4:16999338-16999357 | Msa0979730:intron | 25.0% |
| ! | AGTTGAAAAATTGATGTATG+TGG | - | chr6_4:16999362-16999381 | Msa0979730:intron | 25.0% |
| !!! | AACTATCATTTTTATTCCAG+AGG | - | chr6_4:16999417-16999436 | Msa0979730:intron | 25.0% |
| !!! | ACTATCATTTTTATTCCAGA+GGG | - | chr6_4:16999418-16999437 | Msa0979730:intron | 25.0% |
| ! | GGAATACATTACATTGAAAT+TGG | + | chr6_4:16999819-16999838 | None:intergenic | 25.0% |
| !!! | GTCTTTTGTCTATTTTTTTG+AGG | - | chr6_4:16999839-16999858 | Msa0979730:intron | 25.0% |
| !! | TTGTTTCTTTCAAAGATCTT+TGG | - | chr6_4:16999938-16999957 | Msa0979730:intron | 25.0% |
| ! | TTTCACAAAAACCATATGAT+CGG | - | chr6_4:17000005-17000024 | Msa0979730:intron | 25.0% |
| ! | TATAAATTCTGCTACACTAT+AGG | - | chr6_4:17000069-17000088 | Msa0979730:intron | 25.0% |
| ! | ATAAATTCTGCTACACTATA+GGG | - | chr6_4:17000070-17000089 | Msa0979730:intron | 25.0% |
| ! | TCATTAATGAGAAATGCAAA+TGG | - | chr6_4:17000242-17000261 | Msa0979730:intron | 25.0% |
| ! | ATGATTATACCTCAGTAATT+GGG | + | chr6_4:17000276-17000295 | None:intergenic | 25.0% |
| ! | CTAAGATAAGACAAATTTAG+CGG | + | chr6_4:17000489-17000508 | None:intergenic | 25.0% |
| ! | AAAAATTGATTAGCAAAGGT+AGG | + | chr6_4:17000823-17000842 | None:intergenic | 25.0% |
| ! | TTTCAAATTATTAGCTGTGT+CGG | - | chr6_4:17000962-17000981 | Msa0979730:intron | 25.0% |
| ! | GAGAAAAGTTATTCTTTGAT+GGG | - | chr6_4:17001039-17001058 | Msa0979730:intron | 25.0% |
| ! | ACACACATGATAATAAACTA+TGG | - | chr6_4:17001120-17001139 | Msa0979730:intron | 25.0% |
| !! | GAGTCAAATTTTTGCTAATA+AGG | - | chr6_4:17001202-17001221 | Msa0979730:intron | 25.0% |
| ! | TGATTTGAACTAGCAATATT+CGG | + | chr6_4:17001341-17001360 | None:intergenic | 25.0% |
| !!! | TTGTTAAATAGCGGATATAT+TGG | + | chr6_4:17001526-17001545 | None:intergenic | 25.0% |
| ! | TGCATTAAACAAGATCATAT+AGG | + | chr6_4:17001563-17001582 | None:intergenic | 25.0% |
| !!! | TTTTGCCAGATTTTAATTGA+AGG | - | chr6_4:17001633-17001652 | Msa0979730:intron | 25.0% |
| ! | AGATGAATCATATTCATAAC+CGG | + | chr6_4:17001703-17001722 | None:intergenic | 25.0% |
| ! | TTACCTTAGAAACATATTGA+CGG | + | chr6_4:17001727-17001746 | None:intergenic | 25.0% |
| !! | CATGAAACTGTTTAAAATTG+TGG | - | chr6_4:17002082-17002101 | Msa0979730:intron | 25.0% |
| ! | ATCTTAACCAAGCAATAATT+TGG | - | chr6_4:17002127-17002146 | Msa0979730:intron | 25.0% |
| ! | TCAATTACCAAATTATTGCT+TGG | + | chr6_4:17002137-17002156 | None:intergenic | 25.0% |
| !! | GTTGCATTGTTATTCAATTA+AGG | - | chr6_4:17002178-17002197 | Msa0979730:intron | 25.0% |
| ! | TATATACATCACAAGATGAT+AGG | + | chr6_4:17002299-17002318 | None:intergenic | 25.0% |
| AAGCAAAATGAAAATTGGGT+TGG | + | chr6_4:16995205-16995224 | None:intergenic | 30.0% | |
| ! | TGTGAATTTAGGGTTTATTG+TGG | - | chr6_4:16995345-16995364 | Msa0979730:three_prime_UTR | 30.0% |
| GAATTGGTTGTATCCAAAAA+AGG | + | chr6_4:16995512-16995531 | None:intergenic | 30.0% | |
| ! | TTTTTGGATACAACCAATTC+AGG | - | chr6_4:16995512-16995531 | Msa0979730:CDS | 30.0% |
| ! | GCTTGATTTGAAAGTTATGT+TGG | - | chr6_4:16995574-16995593 | Msa0979730:CDS | 30.0% |
| GCAAATTTATGGTTTCTTCT+TGG | + | chr6_4:16995905-16995924 | None:intergenic | 30.0% | |
| TGTATGACATGGCAAATTTA+TGG | + | chr6_4:16995916-16995935 | None:intergenic | 30.0% | |
| ACAATTCGCTCAACAAATAA+GGG | + | chr6_4:16996618-16996637 | None:intergenic | 30.0% | |
| AACAATTCGCTCAACAAATA+AGG | + | chr6_4:16996619-16996638 | None:intergenic | 30.0% | |
| !! | ATAATTCTAAGACAGGAAGA+TGG | + | chr6_4:16997006-16997025 | None:intergenic | 30.0% |
| ! | TGATTTGCATTATCATCAGA+AGG | - | chr6_4:16997127-16997146 | Msa0979730:intron | 30.0% |
| TCCTTGTATTTCTCCAATAT+AGG | - | chr6_4:16997334-16997353 | Msa0979730:intron | 30.0% | |
| CCTTGTATTTCTCCAATATA+GGG | - | chr6_4:16997335-16997354 | Msa0979730:intron | 30.0% | |
| ! | TGTCATTTATGCATACCTAA+CGG | - | chr6_4:16997413-16997432 | Msa0979730:intron | 30.0% |
| AATTGCATTAATCATCCGTT+AGG | + | chr6_4:16997431-16997450 | None:intergenic | 30.0% | |
| TCTTCCTCCTAATAATCATA+TGG | + | chr6_4:16997457-16997476 | None:intergenic | 30.0% | |
| GTTTGGATTGAATAATTAGG+AGG | - | chr6_4:16997563-16997582 | Msa0979730:intron | 30.0% | |
| TAATTAGGAGGAAAAAGATC+GGG | - | chr6_4:16997575-16997594 | Msa0979730:intron | 30.0% | |
| !! | TTTCACTGATTTAGGATTCT+GGG | + | chr6_4:16997709-16997728 | None:intergenic | 30.0% |
| !! | ATTTCACTGATTTAGGATTC+TGG | + | chr6_4:16997710-16997729 | None:intergenic | 30.0% |
| ! | ATCGTGGATTTTACGATTAA+CGG | + | chr6_4:16997748-16997767 | None:intergenic | 30.0% |
| GCATATAAAATAGCATACGT+AGG | + | chr6_4:16998117-16998136 | None:intergenic | 30.0% | |
| CCTAAAAATATGTAAGGTGT+AGG | + | chr6_4:16998238-16998257 | None:intergenic | 30.0% | |
| ! | CCTACACCTTACATATTTTT+AGG | - | chr6_4:16998235-16998254 | Msa0979730:intron | 30.0% |
| ! | TTGGTGATCAATATTTATCC+AGG | + | chr6_4:16998486-16998505 | None:intergenic | 30.0% |
| ATATTGATCACCAATTGTTG+GGG | - | chr6_4:16998492-16998511 | Msa0979730:intron | 30.0% | |
| TTTCTATTATCCCCAACAAT+TGG | + | chr6_4:16998505-16998524 | None:intergenic | 30.0% | |
| ! | CAACAATGATAATGATAGTG+AGG | + | chr6_4:16998530-16998549 | None:intergenic | 30.0% |
| GATAAAAGATCGTAAACATG+AGG | - | chr6_4:16998593-16998612 | Msa0979730:intron | 30.0% | |
| AGAAAATAGAGGAAAAACAG+AGG | - | chr6_4:16998680-16998699 | Msa0979730:intron | 30.0% | |
| AGAAAAAAGAGGAAAAACAG+AGG | - | chr6_4:16998721-16998740 | Msa0979730:intron | 30.0% | |
| AAATACCAACAATTGTAGTC+AGG | + | chr6_4:16998908-16998927 | None:intergenic | 30.0% | |
| TCAAACCACTAAATTGCTTT+AGG | + | chr6_4:16998984-16999003 | None:intergenic | 30.0% | |
| !!! | AGTGTTTTGGGTTTTACATT+TGG | + | chr6_4:16999282-16999301 | None:intergenic | 30.0% |
| TTGTAAAATTATACTCCCTC+TGG | + | chr6_4:16999436-16999455 | None:intergenic | 30.0% | |
| ! | TGTTTTCTCATTCTCTTATC+AGG | - | chr6_4:16999669-16999688 | Msa0979730:intron | 30.0% |
| AAAAAAGATGCCATTCACTT+AGG | + | chr6_4:16999920-16999939 | None:intergenic | 30.0% | |
| TATTTGACAACACTGAATAC+AGG | - | chr6_4:17000214-17000233 | Msa0979730:intron | 30.0% | |
| ATTTGACAACACTGAATACA+GGG | - | chr6_4:17000215-17000234 | Msa0979730:intron | 30.0% | |
| CATGATTATACCTCAGTAAT+TGG | + | chr6_4:17000277-17000296 | None:intergenic | 30.0% | |
| !! | TTGAAGTTTTTGCTATCATC+AGG | - | chr6_4:17000533-17000552 | Msa0979730:intron | 30.0% |
| TCGTTTGTACAAATTGGATA+GGG | - | chr6_4:17000618-17000637 | Msa0979730:intron | 30.0% | |
| !!! | TTTCTTCCTTTGTTTTCACT+TGG | - | chr6_4:17000690-17000709 | Msa0979730:intron | 30.0% |
| ! | CATTTTCCAAGTGAAAACAA+AGG | + | chr6_4:17000699-17000718 | None:intergenic | 30.0% |
| ! | AACTTTTCTCCTATGAAACA+CGG | + | chr6_4:17001029-17001048 | None:intergenic | 30.0% |
| GGAGAAAAGTTATTCTTTGA+TGG | - | chr6_4:17001038-17001057 | Msa0979730:intron | 30.0% | |
| !! | TATATGATGGACTAAGATTG+TGG | - | chr6_4:17001276-17001295 | Msa0979730:intron | 30.0% |
| TTATTAAAATTCCCGTAAGC+AGG | - | chr6_4:17001477-17001496 | Msa0979730:intron | 30.0% | |
| GAAGTCCTTCAATTAAAATC+TGG | + | chr6_4:17001641-17001660 | None:intergenic | 30.0% | |
| ! | TTACAATTCTCTGAAGATGA+TGG | - | chr6_4:17001789-17001808 | Msa0979730:intron | 30.0% |
| AATGCATTCATTGCAAAGAA+TGG | - | chr6_4:17001896-17001915 | Msa0979730:intron | 30.0% | |
| ATGCATTCATTGCAAAGAAT+GGG | - | chr6_4:17001897-17001916 | Msa0979730:intron | 30.0% | |
| !! | AACTGCTTTTGTTAATGAGA+TGG | - | chr6_4:17002057-17002076 | Msa0979730:exon | 30.0% |
| ! | TGTTTAAAATTGTGGCAAAC+TGG | - | chr6_4:17002090-17002109 | Msa0979730:intron | 30.0% |
| CTTGGTTAAGATTCAAGATA+TGG | + | chr6_4:17002119-17002138 | None:intergenic | 30.0% | |
| TTAGGGTTTATTGTGGAAGA+TGG | - | chr6_4:16995352-16995371 | Msa0979730:three_prime_UTR | 35.0% | |
| TAGGGTTTATTGTGGAAGAT+GGG | - | chr6_4:16995353-16995372 | Msa0979730:three_prime_UTR | 35.0% | |
| AGTGCATTTCAGAGAAGTAA+TGG | - | chr6_4:16995419-16995438 | Msa0979730:three_prime_UTR | 35.0% | |
| !! | TCAGAGAAGTAATGGTTTTG+TGG | - | chr6_4:16995427-16995446 | Msa0979730:three_prime_UTR | 35.0% |
| TTGGTTGTATCCAAAAAAGG+AGG | + | chr6_4:16995509-16995528 | None:intergenic | 35.0% | |
| ! | CAAAAAGGGTATACCTGAAT+TGG | + | chr6_4:16995528-16995547 | None:intergenic | 35.0% |
| ! | ATTCAGGTATACCCTTTTTG+TGG | - | chr6_4:16995528-16995547 | Msa0979730:CDS | 35.0% |
| !! | TGATGGTATTGGTGTCTTAT+TGG | + | chr6_4:16995685-16995704 | None:intergenic | 35.0% |
| TATTGGGAAAATTGCACTGA+CGG | - | chr6_4:16995855-16995874 | Msa0979730:intron | 35.0% | |
| GTGGAATACAAGATGTTCAT+TGG | - | chr6_4:16995964-16995983 | Msa0979730:intron | 35.0% | |
| ATATTAGGGAAATTGCACTG+AGG | - | chr6_4:16996275-16996294 | Msa0979730:intron | 35.0% | |
| TATTAGGGAAATTGCACTGA+GGG | - | chr6_4:16996276-16996295 | Msa0979730:intron | 35.0% | |
| GGTAGATTGAAGGTTCTTAT+TGG | + | chr6_4:16996326-16996345 | None:intergenic | 35.0% | |
| TAGCTCAAAAACTAAAAGGG+TGG | + | chr6_4:16996580-16996599 | None:intergenic | 35.0% | |
| AAATATCTGACCAATAGCAG+GGG | + | chr6_4:16996844-16996863 | None:intergenic | 35.0% | |
| GAAATATCTGACCAATAGCA+GGG | + | chr6_4:16996845-16996864 | None:intergenic | 35.0% | |
| AGAAATATCTGACCAATAGC+AGG | + | chr6_4:16996846-16996865 | None:intergenic | 35.0% | |
| GCTATTGGTCAGATATTTCT+TGG | - | chr6_4:16996846-16996865 | Msa0979730:CDS | 35.0% | |
| CCCTATATTGGAGAAATACA+AGG | + | chr6_4:16997338-16997357 | None:intergenic | 35.0% | |
| CTACGCATTGTAGTCAAAAT+GGG | - | chr6_4:16997621-16997640 | Msa0979730:CDS | 35.0% | |
| TACGCATTGTAGTCAAAATG+GGG | - | chr6_4:16997622-16997641 | Msa0979730:CDS | 35.0% | |
| AACGTTAATCGCAAAATCGT+AGG | + | chr6_4:16997664-16997683 | None:intergenic | 35.0% | |
| AATCGTAAAATCCACGATCT+TGG | - | chr6_4:16997750-16997769 | Msa0979730:intron | 35.0% | |
| ATGGATCAGTTTCAAATCGT+GGG | - | chr6_4:16997838-16997857 | Msa0979730:intron | 35.0% | |
| GTCTTACGAGTTACTAAAAC+AGG | + | chr6_4:16997904-16997923 | None:intergenic | 35.0% | |
| TAGTAACTCGTAAGACTTTC+TGG | - | chr6_4:16997908-16997927 | Msa0979730:intron | 35.0% | |
| CTAGTTTAAGTGCATCATGT+TGG | - | chr6_4:16997945-16997964 | Msa0979730:intron | 35.0% | |
| AGAATCGTTACACAAATCCT+AGG | + | chr6_4:16998171-16998190 | None:intergenic | 35.0% | |
| AAATATGTAAGGTGTAGGAG+AGG | + | chr6_4:16998233-16998252 | None:intergenic | 35.0% | |
| !!! | TCAGGTTCGAGTTTTTAAGT+AGG | - | chr6_4:16998559-16998578 | Msa0979730:intron | 35.0% |
| !!! | CAGGTTCGAGTTTTTAAGTA+GGG | - | chr6_4:16998560-16998579 | Msa0979730:intron | 35.0% |
| !!! | TTCGAGTTTTTAAGTAGGGT+CGG | - | chr6_4:16998564-16998583 | Msa0979730:intron | 35.0% |
| AAACTGATCGATCCTACTTA+CGG | + | chr6_4:16998632-16998651 | None:intergenic | 35.0% | |
| AGGAAAAACAGAGTAAACAG+AGG | - | chr6_4:16998762-16998781 | Msa0979730:intron | 35.0% | |
| ! | ATCGTGCTTTAACTTTACTC+AGG | + | chr6_4:16998834-16998853 | None:intergenic | 35.0% |
| GTAAAGTTAAAGCACGATTG+AGG | - | chr6_4:16998836-16998855 | Msa0979730:intron | 35.0% | |
| TATGCGTGTGCATTTACATT+TGG | - | chr6_4:16999063-16999082 | Msa0979730:intron | 35.0% | |
| GTCACTGCTATCTATTAACA+AGG | - | chr6_4:16999143-16999162 | Msa0979730:intron | 35.0% | |
| ! | AGGTGTTCTCTCTTTAGTTT+AGG | - | chr6_4:16999163-16999182 | Msa0979730:intron | 35.0% |
| !!! | GTTTAGGTTGTTTTCATGCA+AGG | - | chr6_4:16999179-16999198 | Msa0979730:intron | 35.0% |
| ACCTAGTCATTGCTATCTAT+TGG | - | chr6_4:16999576-16999595 | Msa0979730:intron | 35.0% | |
| !! | TCATTGCTATCTATTGGCTT+TGG | - | chr6_4:16999582-16999601 | Msa0979730:intron | 35.0% |
| CTCTTATCAGGTTTGACATA+TGG | - | chr6_4:16999681-16999700 | Msa0979730:intron | 35.0% | |
| TATCAGGTTTGACATATGGT+AGG | - | chr6_4:16999685-16999704 | Msa0979730:intron | 35.0% | |
| GATATCATCAACTTCCTTGA+AGG | - | chr6_4:16999741-16999760 | Msa0979730:intron | 35.0% | |
| GAGTCAAATTACAACCTTCA+AGG | + | chr6_4:16999758-16999777 | None:intergenic | 35.0% | |
| TGAAGGTTGTAATTTGACTC+TGG | - | chr6_4:16999758-16999777 | Msa0979730:intron | 35.0% | |
| GCATTTATTGCCTAAGTGAA+TGG | - | chr6_4:16999907-16999926 | Msa0979730:intron | 35.0% | |
| TTGTCAAATAACGACTACAG+CGG | + | chr6_4:17000204-17000223 | None:intergenic | 35.0% | |
| TACCTCAGTAATTGGGAATT+AGG | + | chr6_4:17000269-17000288 | None:intergenic | 35.0% | |
| TTAAGCACTTGTGACTGTTT+GGG | + | chr6_4:17000430-17000449 | None:intergenic | 35.0% | |
| TCACAAGTGCTTAAGTCAAT+AGG | - | chr6_4:17000436-17000455 | Msa0979730:intron | 35.0% | |
| !! | AGTTTTTGCTATCATCAGGA+TGG | - | chr6_4:17000537-17000556 | Msa0979730:intron | 35.0% |
| TGTCATAGGAACTGTAAGTA+GGG | + | chr6_4:17000570-17000589 | None:intergenic | 35.0% | |
| TTGTCATAGGAACTGTAAGT+AGG | + | chr6_4:17000571-17000590 | None:intergenic | 35.0% | |
| GTCGTTTGTACAAATTGGAT+AGG | - | chr6_4:17000617-17000636 | Msa0979730:intron | 35.0% | |
| TATACCTCTTGCCAATAGAA+AGG | - | chr6_4:17000655-17000674 | Msa0979730:intron | 35.0% | |
| ATACCTCTTGCCAATAGAAA+GGG | - | chr6_4:17000656-17000675 | Msa0979730:intron | 35.0% | |
| ATCAGATTGATCGTTCTCAA+TGG | - | chr6_4:17000747-17000766 | Msa0979730:intron | 35.0% | |
| TCAGATTGATCGTTCTCAAT+GGG | - | chr6_4:17000748-17000767 | Msa0979730:intron | 35.0% | |
| AAGAGAAAAGCTATGAAGCA+CGG | - | chr6_4:17000848-17000867 | Msa0979730:intron | 35.0% | |
| ! | TGTAATTACAAGTGTCGTGT+CGG | + | chr6_4:17000926-17000945 | None:intergenic | 35.0% |
| ! | CCATTGATTGGGAAAATCAA+TGG | + | chr6_4:17001164-17001183 | None:intergenic | 35.0% |
| !!! | CCATTGATTTTCCCAATCAA+TGG | - | chr6_4:17001161-17001180 | Msa0979730:intron | 35.0% |
| TCACAGATTGCTGAAAATAG+CGG | - | chr6_4:17001371-17001390 | Msa0979730:intron | 35.0% | |
| AAGCTCACAATATGCAGATT+TGG | - | chr6_4:17001665-17001684 | Msa0979730:intron | 35.0% | |
| ! | CTTCCGTCAATATGTTTCTA+AGG | - | chr6_4:17001721-17001740 | Msa0979730:intron | 35.0% |
| ! | TACTTTGTTTGTTTCAGAGC+TGG | - | chr6_4:17001812-17001831 | Msa0979730:intron | 35.0% |
| !!! | ACGTATCGTTGCCATTTTAA+CGG | + | chr6_4:17001852-17001871 | None:intergenic | 35.0% |
| CAGTAATTACAAGACTCTCA+TGG | - | chr6_4:17001959-17001978 | Msa0979730:CDS | 35.0% | |
| TTTCTGCTACGATCGTTCAA+AGG | + | chr6_4:16995133-16995152 | None:intergenic | 40.0% | |
| CGTAGCAGAAAAAATCGAAC+AGG | - | chr6_4:16995142-16995161 | Msa0979730:three_prime_UTR | 40.0% | |
| !!! | AACTGCTACACCTCCTTTTT+TGG | - | chr6_4:16995496-16995515 | Msa0979730:CDS | 40.0% |
| GTTTATTGGGCATGCAATGA+TGG | - | chr6_4:16995635-16995654 | Msa0979730:intron | 40.0% | |
| ! | ACATGGCAGATTGATGGTAT+TGG | + | chr6_4:16995696-16995715 | None:intergenic | 40.0% |
| TGTATGACATGGCAGATTGA+TGG | + | chr6_4:16995702-16995721 | None:intergenic | 40.0% | |
| ! | ATTGCACTGACGGTGTAAAA+TGG | - | chr6_4:16995865-16995884 | Msa0979730:intron | 40.0% |
| TGTACAGCATGGTAGATTGA+AGG | + | chr6_4:16996336-16996355 | None:intergenic | 40.0% | |
| GGTGGAATAAAGATGCTCAT+TGG | - | chr6_4:16996418-16996437 | Msa0979730:intron | 40.0% | |
| ATTCGCTCAACAAATAAGGG+TGG | + | chr6_4:16996615-16996634 | None:intergenic | 40.0% | |
| AACACCTGTTAGAAACGTCT+TGG | - | chr6_4:16996794-16996813 | Msa0979730:intron | 40.0% | |
| GCATCAGAAGTGATTCATCT+TGG | - | chr6_4:16997044-16997063 | Msa0979730:intron | 40.0% | |
| AAGTATAGCCTATACGACAC+TGG | + | chr6_4:16997259-16997278 | None:intergenic | 40.0% | |
| GTGTCGTATAGGCTATACTT+TGG | - | chr6_4:16997259-16997278 | Msa0979730:intron | 40.0% | |
| CTCCAATATAGGGAAGAATG+CGG | - | chr6_4:16997345-16997364 | Msa0979730:intron | 40.0% | |
| TTCCGCATTCTTCCCTATAT+TGG | + | chr6_4:16997350-16997369 | None:intergenic | 40.0% | |
| !!! | CCATTTTGACTACAATGCGT+AGG | + | chr6_4:16997623-16997642 | None:intergenic | 40.0% |
| CCTACGCATTGTAGTCAAAA+TGG | - | chr6_4:16997620-16997639 | Msa0979730:CDS | 40.0% | |
| GGTATAGTCATGATCCTTCA+AGG | + | chr6_4:16997688-16997707 | None:intergenic | 40.0% | |
| TAAAATCCACGATCTTGGAG+TGG | - | chr6_4:16997755-16997774 | Msa0979730:intron | 40.0% | |
| GATGGATCAGTTTCAAATCG+TGG | - | chr6_4:16997837-16997856 | Msa0979730:intron | 40.0% | |
| AGAAACCCGTTTCAGTAACT+CGG | - | chr6_4:16997865-16997884 | Msa0979730:intron | 40.0% | |
| TAGTCAAAATCCGTAAGGAG+AGG | + | chr6_4:16998210-16998229 | None:intergenic | 40.0% | |
| AGAGGTAGTCAAAATCCGTA+AGG | + | chr6_4:16998215-16998234 | None:intergenic | 40.0% | |
| !! | AGAAAGACTTAGGCCTTGTT+TGG | + | chr6_4:16998343-16998362 | None:intergenic | 40.0% |
| CGAGTGACAACTAAATGCTA+AGG | + | chr6_4:16998375-16998394 | None:intergenic | 40.0% | |
| AATAGGACACTGCTACGTAT+TGG | + | chr6_4:16998398-16998417 | None:intergenic | 40.0% | |
| TCATTGTTGCCAATGTAGTC+AGG | - | chr6_4:16998541-16998560 | Msa0979730:intron | 40.0% | |
| AAACTCGAACCTGACTACAT+TGG | + | chr6_4:16998553-16998572 | None:intergenic | 40.0% | |
| !!! | AGTTTTTAAGTAGGGTCGGT+AGG | - | chr6_4:16998568-16998587 | Msa0979730:intron | 40.0% |
| GGAAACAAGCAAACACATAG+AGG | - | chr6_4:16998742-16998761 | Msa0979730:intron | 40.0% | |
| AACACCGAACAGATGAAAAC+AGG | - | chr6_4:16998797-16998816 | Msa0979730:intron | 40.0% | |
| ACACCGAACAGATGAAAACA+GGG | - | chr6_4:16998798-16998817 | Msa0979730:intron | 40.0% | |
| ! | TTGCCCTGTTTTCATCTGTT+CGG | + | chr6_4:16998804-16998823 | None:intergenic | 40.0% |
| TCGATCCTGACTACAATTGT+TGG | - | chr6_4:16998900-16998919 | Msa0979730:intron | 40.0% | |
| GTATGCGTGAATAGACATAC+TGG | + | chr6_4:16999257-16999276 | None:intergenic | 40.0% | |
| TGTGCACACATATGTTCTGT+CGG | + | chr6_4:16999491-16999510 | None:intergenic | 40.0% | |
| GCCAATAGATAGCAATGACT+AGG | + | chr6_4:16999580-16999599 | None:intergenic | 40.0% | |
| GACTCTGGACGATGTTAAAA+TGG | - | chr6_4:16999773-16999792 | Msa0979730:intron | 40.0% | |
| CCATGCTATGACTGTCAAAA+TGG | + | chr6_4:16999865-16999884 | None:intergenic | 40.0% | |
| !! | CCATTTTGACAGTCATAGCA+TGG | - | chr6_4:16999862-16999881 | Msa0979730:intron | 40.0% |
| ! | TTTTGACAGTCATAGCATGG+TGG | - | chr6_4:16999865-16999884 | Msa0979730:intron | 40.0% |
| ACAACAAAGCTCCGATCATA+TGG | + | chr6_4:17000019-17000038 | None:intergenic | 40.0% | |
| ! | TTGTTGTCAATCGCGGATTA+CGG | - | chr6_4:17000032-17000051 | Msa0979730:intron | 40.0% |
| GTCCTAATTCCCAATTACTG+AGG | - | chr6_4:17000264-17000283 | Msa0979730:intron | 40.0% | |
| TGACTGTTTGGGAGAACTTA+TGG | + | chr6_4:17000419-17000438 | None:intergenic | 40.0% | |
| CTTAAGCACTTGTGACTGTT+TGG | + | chr6_4:17000431-17000450 | None:intergenic | 40.0% | |
| AGACAAATTTAGCGGCTGTT+TGG | + | chr6_4:17000481-17000500 | None:intergenic | 40.0% | |
| GAAGGGTCGTTTGTACAAAT+TGG | - | chr6_4:17000612-17000631 | Msa0979730:intron | 40.0% | |
| TTTCCCTTTCTATTGGCAAG+AGG | + | chr6_4:17000662-17000681 | None:intergenic | 40.0% | |
| TCTCCTATGAAACACGGATA+CGG | + | chr6_4:17001023-17001042 | None:intergenic | 40.0% | |
| ! | ACGAGGAATAGCCATTGATT+GGG | + | chr6_4:17001175-17001194 | None:intergenic | 40.0% |
| AACGAGGAATAGCCATTGAT+TGG | + | chr6_4:17001176-17001195 | None:intergenic | 40.0% | |
| !! | AATTTGACTCCTCTGAAACG+AGG | + | chr6_4:17001192-17001211 | None:intergenic | 40.0% |
| CGTTACAGTGCTATAGCTAT+AGG | - | chr6_4:17001412-17001431 | Msa0979730:intron | 40.0% | |
| GATTTGGATCAGATTGTGTC+CGG | - | chr6_4:17001681-17001700 | Msa0979730:intron | 40.0% | |
| GGGTAATGAACCCGTTAAAA+TGG | - | chr6_4:17001838-17001857 | Msa0979730:intron | 40.0% | |
| !!! | CGTATCGTTGCCATTTTAAC+GGG | + | chr6_4:17001851-17001870 | None:intergenic | 40.0% |
| CAACGATACGTTTCCATTCA+AGG | - | chr6_4:17001861-17001880 | Msa0979730:intron | 40.0% | |
| TCATCGCTTGAATCCTTGAA+TGG | + | chr6_4:17001877-17001896 | None:intergenic | 40.0% | |
| GTATCGAAATGCGATTGTTG+AGG | + | chr6_4:17001931-17001950 | None:intergenic | 40.0% | |
| TTACAAGACTCTCATGGTGA+TGG | - | chr6_4:17001965-17001984 | Msa0979730:CDS | 40.0% | |
| ! | AGTTTTACACCGTCATCCAA+TGG | - | chr6_4:17002271-17002290 | Msa0979730:intron | 40.0% |
| GTAGCAGTTGTTGAATCCTG+TGG | + | chr6_4:16995485-16995504 | None:intergenic | 45.0% | |
| GCTGAGTACAAGATGCTCAT+TGG | - | chr6_4:16995755-16995774 | Msa0979730:CDS | 45.0% | |
| CGTATGACATGGCAGATTGA+TGG | + | chr6_4:16996125-16996144 | None:intergenic | 45.0% | |
| TCAGTTGGGAGATGTGTTCT+TGG | + | chr6_4:16996663-16996682 | None:intergenic | 45.0% | |
| GCATCCAAGACGTTTCTAAC+AGG | + | chr6_4:16996801-16996820 | None:intergenic | 45.0% | |
| TCAGTGTTCCAGTGTCGTAT+AGG | - | chr6_4:16997248-16997267 | Msa0979730:intron | 45.0% | |
| TTGGACATTAGTCGTCGCTT+CGG | - | chr6_4:16997278-16997297 | Msa0979730:intron | 45.0% | |
| AGGAGGAAAAAGATCGGGTT+TGG | - | chr6_4:16997580-16997599 | Msa0979730:intron | 45.0% | |
| GGAGGAAAAAGATCGGGTTT+GGG | - | chr6_4:16997581-16997600 | Msa0979730:intron | 45.0% | |
| TGCGATTAACGTTGCCTTGA+AGG | - | chr6_4:16997671-16997690 | Msa0979730:CDS | 45.0% | |
| !! | CACTCTAGGGTTAGGAAAGA+TGG | - | chr6_4:16997819-16997838 | Msa0979730:intron | 45.0% |
| GAAACCCGTTTCAGTAACTC+GGG | - | chr6_4:16997866-16997885 | Msa0979730:intron | 45.0% | |
| TTGACCCGAGTTACTGAAAC+GGG | + | chr6_4:16997873-16997892 | None:intergenic | 45.0% | |
| CTTGACCCGAGTTACTGAAA+CGG | + | chr6_4:16997874-16997893 | None:intergenic | 45.0% | |
| TAAGTGCATCATGTTGGTGC+TGG | - | chr6_4:16997951-16997970 | Msa0979730:intron | 45.0% | |
| TGCGACTTTACCTCTCCTTA+CGG | - | chr6_4:16998197-16998216 | Msa0979730:intron | 45.0% | |
| TCGTAACACGATCCGTAAGT+AGG | - | chr6_4:16998617-16998636 | Msa0979730:intron | 45.0% | |
| TCATATGATCCTACGTCCCA+CGG | + | chr6_4:16998864-16998883 | None:intergenic | 45.0% | |
| !! | AGGATCGAGTTCTGGTTTGT+AGG | + | chr6_4:16998888-16998907 | None:intergenic | 45.0% |
| TTGTAGTCAGGATCGAGTTC+TGG | + | chr6_4:16998896-16998915 | None:intergenic | 45.0% | |
| AGGTTTGACATATGGTAGGC+TGG | - | chr6_4:16999689-16999708 | Msa0979730:intron | 45.0% | |
| TTGACATATGGTAGGCTGGT+TGG | - | chr6_4:16999693-16999712 | Msa0979730:intron | 45.0% | |
| CACGCGTATAGCATTGTCAT+AGG | + | chr6_4:17000584-17000603 | None:intergenic | 45.0% | |
| GACAATGCTATACGCGTGAT+CGG | - | chr6_4:17000586-17000605 | Msa0979730:intron | 45.0% | |
| GACATCGTTACTCCTTACGA+CGG | - | chr6_4:17000770-17000789 | Msa0979730:intron | 45.0% | |
| CTTACAGTTCTTCCGTCGTA+AGG | + | chr6_4:17000785-17000804 | None:intergenic | 45.0% | |
| GTCAGTATCTGTGTTGTGTC+CGG | - | chr6_4:17000988-17001007 | Msa0979730:intron | 45.0% | |
| ATGAAACACGGATACGGACA+CGG | + | chr6_4:17001017-17001036 | None:intergenic | 45.0% | |
| TGTCCGTATCCGTGTTTCAT+AGG | - | chr6_4:17001017-17001036 | Msa0979730:intron | 45.0% | |
| ATGGCTATTCCTCGTTTCAG+AGG | - | chr6_4:17001180-17001199 | Msa0979730:intron | 45.0% | |
| GCTATAGCACTGTAACGTAG+CGG | + | chr6_4:17001409-17001428 | None:intergenic | 45.0% | |
| GCTATAGCATACCTGCTTAC+GGG | + | chr6_4:17001491-17001510 | None:intergenic | 45.0% | |
| CGCTATAGCATACCTGCTTA+CGG | + | chr6_4:17001492-17001511 | None:intergenic | 45.0% | |
| TCTGCATATTGTGAGCTTCG+TGG | + | chr6_4:17001663-17001682 | None:intergenic | 45.0% | |
| TGTTTGTTTCAGAGCTGGAG+AGG | - | chr6_4:17001817-17001836 | Msa0979730:intron | 45.0% | |
| GTTTGTTTCAGAGCTGGAGA+GGG | - | chr6_4:17001818-17001837 | Msa0979730:intron | 45.0% | |
| !! | TCTCATGGTGATGGTTCTGT+AGG | - | chr6_4:17001974-17001993 | Msa0979730:CDS | 45.0% |
| !! | TGATAGGTGCCATTGGATGA+CGG | + | chr6_4:17002283-17002302 | None:intergenic | 45.0% |
| ! | CACAAGATGATAGGTGCCAT+TGG | + | chr6_4:17002290-17002309 | None:intergenic | 45.0% |
| !!! | AATTTTTATATTGATATTTA+TGG | - | chr6_4:16995285-16995304 | Msa0979730:three_prime_UTR | 5.0% |
| !!! | AATATAAATTTTGAAATTAT+TGG | - | chr6_4:16998430-16998449 | Msa0979730:intron | 5.0% |
| !!! | AGTATTTTTTATTTTTTTTA+AGG | + | chr6_4:17000373-17000392 | None:intergenic | 5.0% |
| !! | AAAAAAATAAAAAATACTTA+TGG | - | chr6_4:17000375-17000394 | Msa0979730:intron | 5.0% |
| TGAAGCTGAAAAGCCACCAC+AGG | - | chr6_4:16995466-16995485 | Msa0979730:exon | 50.0% | |
| GCAGTTGTTGAATCCTGTGG+TGG | + | chr6_4:16995482-16995501 | None:intergenic | 50.0% | |
| ACATGCCTGACACGTCAGTT+GGG | + | chr6_4:16996677-16996696 | None:intergenic | 50.0% | |
| AACATGCCTGACACGTCAGT+TGG | + | chr6_4:16996678-16996697 | None:intergenic | 50.0% | |
| AGGCATGTTAGACGCGTTTC+AGG | - | chr6_4:16996689-16996708 | Msa0979730:intron | 50.0% | |
| GAGTGTCTGGCACATGTTCA+AGG | + | chr6_4:16996739-16996758 | None:intergenic | 50.0% | |
| !! | TGGACACGGTTAAGAGTGTC+TGG | + | chr6_4:16996752-16996771 | None:intergenic | 50.0% |
| GGGAAGAATGCGGAACATAG+AGG | - | chr6_4:16997355-16997374 | Msa0979730:intron | 50.0% | |
| CAGAATCCACTCCAAGATCG+TGG | + | chr6_4:16997764-16997783 | None:intergenic | 50.0% | |
| !! | CGGAGCTTTGTTGTCAATCG+CGG | - | chr6_4:17000025-17000044 | Msa0979730:intron | 50.0% |
| ATGCTATACGCGTGATCGGA+AGG | - | chr6_4:17000590-17000609 | Msa0979730:intron | 50.0% | |
| TATACGCGTGATCGGAAGGA+AGG | - | chr6_4:17000594-17000613 | Msa0979730:intron | 50.0% | |
| ATACGCGTGATCGGAAGGAA+GGG | - | chr6_4:17000595-17000614 | Msa0979730:intron | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | - | chr6_4:17000859-17000878 | Msa0979730:intron | 50.0% | |
| ! | TACAAGTGTCGTGTCGGTGT+CGG | + | chr6_4:17000920-17000939 | None:intergenic | 50.0% |
| CATCTCCCAACTGACGTGTC+AGG | - | chr6_4:16996669-16996688 | Msa0979730:intron | 55.0% | |
| TTCAAGGCGTGTCCGAGAAG+TGG | + | chr6_4:16996723-16996742 | None:intergenic | 55.0% | |
| ACTGAGCTGACCCCTGCTAT+TGG | - | chr6_4:16996831-16996850 | Msa0979730:CDS | 55.0% | |
| ! | TGGAGTGGATTCTGCGTTCC+AGG | - | chr6_4:16997770-16997789 | Msa0979730:intron | 55.0% |
| TTCTGCGTTCCAGGTTGCAG+TGG | - | chr6_4:16997779-16997798 | Msa0979730:intron | 55.0% | |
| CGACTTCTACCACTGCAACC+TGG | + | chr6_4:16997791-16997810 | None:intergenic | 55.0% | |
| TGCAGTGGTAGAAGTCGCGA+CGG | - | chr6_4:16997794-16997813 | Msa0979730:intron | 55.0% | |
| !! | AAAGCACGATTGAGGTGCCG+TGG | - | chr6_4:16998844-16998863 | Msa0979730:intron | 55.0% |
| !! | AAGCACGATTGAGGTGCCGT+GGG | - | chr6_4:16998845-16998864 | Msa0979730:intron | 55.0% |
| AACGACTACAGCGGCGCTAT+AGG | + | chr6_4:17000195-17000214 | None:intergenic | 55.0% | |
| !! | CAGGCACCGACACCACTTCT+CGG | - | chr6_4:16996708-16996727 | Msa0979730:intron | 60.0% |
| GCGTGTCCGAGAAGTGGTGT+CGG | + | chr6_4:16996717-16996736 | None:intergenic | 60.0% | |
| CAGGGGTCAGCTCAGTCTCT+TGG | + | chr6_4:16996827-16996846 | None:intergenic | 60.0% | |
| AAGTCGCGACGGTGCACTCT+AGG | - | chr6_4:16997805-16997824 | Msa0979730:intron | 60.0% | |
| AGTCGCGACGGTGCACTCTA+GGG | - | chr6_4:16997806-16997825 | Msa0979730:intron | 60.0% | |
| !! | CGACGGTGCACTCTAGGGTT+AGG | - | chr6_4:16997811-16997830 | Msa0979730:intron | 60.0% |
| !! | ATTGAGGTGCCGTGGGACGT+AGG | - | chr6_4:16998852-16998871 | Msa0979730:intron | 60.0% |
| GCACGGACACTCCTCGGATT+AGG | - | chr6_4:17000865-17000884 | Msa0979730:intron | 60.0% | |
| ! | TCCTCGGATTAGGCGTGTCC+CGG | - | chr6_4:17000875-17000894 | Msa0979730:intron | 60.0% |
| GATTAGGCGTGTCCCGGTGT+CGG | - | chr6_4:17000881-17000900 | Msa0979730:intron | 60.0% | |
| ACACGACACGTGTCCGACAC+CGG | + | chr6_4:17000897-17000916 | None:intergenic | 60.0% | |
| ACGGATACGGACACGGACAC+CGG | + | chr6_4:17001010-17001029 | None:intergenic | 60.0% | |
| ACCGGGACACGCCTAATCCG+AGG | + | chr6_4:17000879-17000898 | None:intergenic | 65.0% | |
| CACGACACGTGTCCGACACC+GGG | + | chr6_4:17000896-17000915 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 16995097 | 17002338 | 16995097 | ID=Msa0979730;Name=Msa0979730 |
| chr6_4 | mRNA | 16995097 | 17002338 | 16995097 | ID=Msa0979730-mRNA-1;Parent=Msa0979730;Name=Msa0979730-mRNA-1;_AED=0.03;_eAED=0.03;_QI=82|1|1|1|0.83|0.71|7|374|222 |
| chr6_4 | exon | 16995097 | 16995606 | 16995097 | ID=Msa0979730-mRNA-1:exon:5410;Parent=Msa0979730-mRNA-1 |
| chr6_4 | exon | 16995693 | 16995793 | 16995693 | ID=Msa0979730-mRNA-1:exon:5409;Parent=Msa0979730-mRNA-1 |
| chr6_4 | exon | 16996636 | 16996683 | 16996636 | ID=Msa0979730-mRNA-1:exon:5408;Parent=Msa0979730-mRNA-1 |
| chr6_4 | exon | 16996796 | 16996880 | 16996796 | ID=Msa0979730-mRNA-1:exon:5407;Parent=Msa0979730-mRNA-1 |
| chr6_4 | exon | 16997609 | 16997744 | 16997609 | ID=Msa0979730-mRNA-1:exon:5406;Parent=Msa0979730-mRNA-1 |
| chr6_4 | exon | 17001902 | 17002079 | 17001902 | ID=Msa0979730-mRNA-1:exon:5405;Parent=Msa0979730-mRNA-1 |
| chr6_4 | exon | 17002272 | 17002338 | 17002272 | ID=Msa0979730-mRNA-1:exon:5404;Parent=Msa0979730-mRNA-1 |
| chr6_4 | five_prime_UTR | 17002272 | 17002338 | 17002272 | ID=Msa0979730-mRNA-1:five_prime_utr;Parent=Msa0979730-mRNA-1 |
| chr6_4 | five_prime_UTR | 17002065 | 17002079 | 17002065 | ID=Msa0979730-mRNA-1:five_prime_utr;Parent=Msa0979730-mRNA-1 |
| chr6_4 | CDS | 17001902 | 17002064 | 17001902 | ID=Msa0979730-mRNA-1:cds;Parent=Msa0979730-mRNA-1 |
| chr6_4 | CDS | 16997609 | 16997744 | 16997609 | ID=Msa0979730-mRNA-1:cds;Parent=Msa0979730-mRNA-1 |
| chr6_4 | CDS | 16996796 | 16996880 | 16996796 | ID=Msa0979730-mRNA-1:cds;Parent=Msa0979730-mRNA-1 |
| chr6_4 | CDS | 16996636 | 16996683 | 16996636 | ID=Msa0979730-mRNA-1:cds;Parent=Msa0979730-mRNA-1 |
| chr6_4 | CDS | 16995693 | 16995793 | 16995693 | ID=Msa0979730-mRNA-1:cds;Parent=Msa0979730-mRNA-1 |
| chr6_4 | CDS | 16995471 | 16995606 | 16995471 | ID=Msa0979730-mRNA-1:cds;Parent=Msa0979730-mRNA-1 |
| chr6_4 | three_prime_UTR | 16995097 | 16995470 | 16995097 | ID=Msa0979730-mRNA-1:three_prime_utr;Parent=Msa0979730-mRNA-1 |
| Gene Sequence |
| Protein sequence |
