AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1305800

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1305800 MtrunA17_Chr1g0191261 97.078 308 9 0 5 312 69 376 0.0 581
Msa1305800 MtrunA17_Chr4g0066671 62.162 74 28 0 5 78 68 141 5.18e-23 97.4
Msa1305800 MtrunA17_Chr7g0230901 44.776 67 37 0 5 71 69 135 8.97e-13 67.0
Msa1305800 MtrunA17_Chr4g0012521 31.544 149 87 4 5 143 69 212 3.23e-12 65.5
Msa1305800 MtrunA17_Chr5g0399741 48.485 66 33 1 4 69 68 132 1.95e-11 62.8
Msa1305800 MtrunA17_Chr4g0012141 46.774 62 33 0 4 65 80 141 2.04e-11 62.4
Msa1305800 MtrunA17_Chr5g0399141 35.789 95 58 1 5 96 71 165 3.81e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1305800 AT1G08820.1 30.195 308 162 9 5 310 68 324 2.61e-24 102
Msa1305800 AT1G08820.5 30.195 308 162 9 5 310 68 324 2.61e-24 102
Msa1305800 AT1G08820.3 30.195 308 162 9 5 310 68 324 2.61e-24 102
Msa1305800 AT1G08820.4 30.195 308 162 9 5 310 68 324 2.61e-24 102
Msa1305800 AT1G08820.2 30.195 308 162 9 5 310 68 324 2.61e-24 102
Msa1305800 AT3G60600.1 42.105 76 42 1 5 80 85 158 7.90e-13 68.2
Msa1305800 AT2G45140.2 44.737 76 40 1 5 80 68 141 8.09e-13 67.4
Msa1305800 AT2G45140.1 44.737 76 40 1 5 80 68 141 1.26e-12 67.0
Msa1305800 AT3G60600.2 42.105 76 42 1 5 80 85 158 1.31e-12 66.6
Msa1305800 AT3G60600.3 42.105 76 42 1 5 80 85 158 1.37e-12 67.0
Msa1305800 AT4G00170.2 44.000 75 41 1 5 79 43 116 5.21e-11 62.0
Msa1305800 AT4G00170.1 43.421 76 42 1 5 80 70 144 7.39e-11 62.0

Find 141 sgRNAs with CRISPR-Local

Find 261 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTTCCTAACCTTATTAAAA+TGG 0.144741 8_3:-69421542 Msa1305800:three_prime_UTR
CCAGAACTAGTTCCTGTTAA+TGG 0.166308 8_3:-69423390 Msa1305800:CDS
CTGCCACCTTGTCAAGATTT+TGG 0.169575 8_3:-69422195 Msa1305800:three_prime_UTR
GGCACTTATCTGTGTCTTCT+TGG 0.212884 8_3:-69420992 Msa1305800:three_prime_UTR
CGATACTTTGTATATAATAT+TGG 0.236274 8_3:-69421587 Msa1305800:three_prime_UTR
CCGTTTACACTCTTGATATC+TGG 0.242302 8_3:-69420965 Msa1305800:three_prime_UTR
GCTTGCTGTAAATAACTATT+AGG 0.249918 8_3:-69422091 Msa1305800:three_prime_UTR
ATACAAACGCAACGTGATTA+TGG 0.266988 8_3:+69420791 None:intergenic
GCAAGATAGTGAAATATAAT+TGG 0.268359 8_3:+69421974 None:intergenic
TCCTTGCACACCAAATCTTC+AGG 0.271440 8_3:+69423651 None:intergenic
TGCCTCAAGTTTGTTATATT+AGG 0.272978 8_3:-69420905 Msa1305800:three_prime_UTR
TTCAACCCTGCTTCTTCTCT+TGG 0.273735 8_3:+69422778 None:intergenic
TTCTTTGAGTCTCCATTAAC+AGG 0.295800 8_3:+69423378 None:intergenic
GTTGAAGGTAGAATATGATA+TGG 0.309168 8_3:-69422830 Msa1305800:CDS
TGCAGAGATTGAAGAGGATA+TGG 0.310428 8_3:-69422854 Msa1305800:CDS
TATGGGGTTGGATGCTATTA+AGG 0.319281 8_3:-69422812 Msa1305800:CDS
GTTTGTTATATTAGGAGTTT+AGG 0.320753 8_3:-69420897 Msa1305800:three_prime_UTR
TCAAAATGTTAGTATCTTCC+TGG 0.337913 8_3:+69420930 None:intergenic
TTTCGTCTAACCATGGGTTC+AGG 0.347161 8_3:+69423297 None:intergenic
CCTCCTCTCCTCTGTTAACT+TGG 0.348926 8_3:+69421414 None:intergenic
TTTCCTAACCTTATTAAAAT+GGG 0.349263 8_3:-69421541 Msa1305800:three_prime_UTR
CCATTAACAGGAACTAGTTC+TGG 0.359456 8_3:+69423390 None:intergenic
ACGGGTAGCCCCTGAAGATT+TGG 0.371733 8_3:-69423661 Msa1305800:CDS
AGGGGAAAGTGGTGTGTATA+AGG 0.371875 8_3:+69421819 None:intergenic
GCACTTATCTGTGTCTTCTT+GGG 0.372916 8_3:-69420991 Msa1305800:three_prime_UTR
TTGAGATTTGAGATGTTAGT+TGG 0.374216 8_3:-69422124 Msa1305800:three_prime_UTR
TGAAGAGGATATGGAGTTGA+AGG 0.374389 8_3:-69422845 Msa1305800:CDS
CACATAGGATTGAGCCTGTA+TGG 0.375175 8_3:+69421621 None:intergenic
GATGAAGGTGTCAAAAGATC+TGG 0.376784 8_3:-69422611 Msa1305800:CDS
CAAATGCCATAGTTCCAAAA+AGG 0.385651 8_3:+69420474 None:intergenic
TGATGAGATTAGTGGAAAAC+TGG 0.389046 8_3:-69420704 Msa1305800:three_prime_UTR
ATTGAGCCTGTATGGATGTT+AGG 0.390986 8_3:+69421629 None:intergenic
GGAACTAGTTCTGGTGAATC+AGG 0.392780 8_3:+69423399 None:intergenic
TAACCATGGGTTCAGGGGAC+TGG 0.399998 8_3:+69423304 None:intergenic
TTGAAGGTAGAATATGATAT+GGG 0.407459 8_3:-69422829 Msa1305800:CDS
CGTTTACACTCTTGATATCT+GGG 0.413556 8_3:-69420964 Msa1305800:three_prime_UTR
CTGCATCAACCAATGTGCTT+TGG 0.415416 8_3:+69423616 None:intergenic
ATATGAACCTTATTATGCTC+TGG 0.416859 8_3:+69422901 None:intergenic
GAGATGAAGTTAAAACTAGA+TGG 0.426084 8_3:-69422337 Msa1305800:CDS
AGTTACAATGCAAGCACAAC+GGG 0.438906 8_3:-69423679 Msa1305800:CDS
CCAGATATCAAGAGTGTAAA+CGG 0.442402 8_3:+69420965 None:intergenic
CAGGCAGATCTCATTAATAC+AGG 0.447142 8_3:-69421063 Msa1305800:three_prime_UTR
AAATTCATTCATAGTTCGTC+AGG 0.449420 8_3:+69420503 None:intergenic
GGTACAAGTCTCAAAAGATC+TGG 0.453038 8_3:-69422686 Msa1305800:CDS
TAATCGAAGTTTGTCAAGGA+TGG 0.457053 8_3:-69423471 Msa1305800:intron
ACGAACTATGAATGAATTTG+AGG 0.457185 8_3:-69420499 Msa1305800:three_prime_UTR
CCTTGCACACCAAATCTTCA+GGG 0.463467 8_3:+69423652 None:intergenic
AGCGGAGTCAAGAGTTTCAA+AGG 0.463926 8_3:-69422395 Msa1305800:CDS
TGATGAAGCAATTGAGCATA+TGG 0.464813 8_3:-69421564 Msa1305800:three_prime_UTR
AAGAGTTTCAAAGGGTATTG+AGG 0.466356 8_3:-69422386 Msa1305800:CDS
GCAGAATTTCTCACTTGTAA+AGG 0.477676 8_3:-69420766 Msa1305800:three_prime_UTR
TTATTTACAGCAAGCGGTGA+AGG 0.483076 8_3:+69422099 None:intergenic
TTCGTCTAACCATGGGTTCA+GGG 0.488202 8_3:+69423298 None:intergenic
TATATTTCACTATCTTGCTA+TGG 0.488375 8_3:-69421969 Msa1305800:three_prime_UTR
GTTAATGGAGACTCAAAGAA+TGG 0.489508 8_3:-69423375 Msa1305800:CDS
ATTGAAAACATATGACCAAA+AGG 0.489902 8_3:+69422148 None:intergenic
AATGCTCCATCTGATCTGTC+TGG 0.490201 8_3:-69420815 Msa1305800:three_prime_UTR
TACTGTCTTAATCACTGTAT+CGG 0.494218 8_3:+69422450 None:intergenic
GGAACTGAAACCAGGAAAAG+AGG 0.496214 8_3:-69422638 Msa1305800:CDS
TGAGGAGATGAACTCAGTAA+AGG 0.496472 8_3:-69422743 Msa1305800:CDS
GAGGAGATGAACTCAGTAAA+GGG 0.496692 8_3:-69422742 Msa1305800:CDS
AGGAAAAGAGGCAGAGATGA+AGG 0.499789 8_3:-69422626 Msa1305800:CDS
GTCCAAGAAAAGTTCAAGTC+GGG 0.504636 8_3:-69421041 Msa1305800:three_prime_UTR
CAATTGAGTTCACAGGGAAA+AGG 0.509750 8_3:+69420649 None:intergenic
CCCTGAAGATTTGGTGTGCA+AGG 0.515432 8_3:-69423652 Msa1305800:CDS
CGAACTATGAATGAATTTGA+GGG 0.521272 8_3:-69420498 Msa1305800:three_prime_UTR
TACTAATCAATTGAGTTCAC+AGG 0.522756 8_3:+69420642 None:intergenic
AAAGCAGAGGAACTGAAACC+TGG 0.523769 8_3:-69422571 Msa1305800:CDS
GGAGAGCCAAGAGAAGAAGC+AGG 0.526638 8_3:-69422784 Msa1305800:CDS
TGCCTTTCCATTGTTTACTG+TGG 0.527555 8_3:+69422510 None:intergenic
ACAGTAACTTGCGACTTGCT+AGG 0.530256 8_3:+69422227 None:intergenic
TAGAGATTAGCATGAAAGTC+GGG 0.531474 8_3:+69421497 None:intergenic
TTGGATGCTATTAAGGATGT+AGG 0.531555 8_3:-69422805 Msa1305800:CDS
AAATGAAAACAAGGGGAAAG+TGG 0.541657 8_3:+69421808 None:intergenic
TCACGAACCTTAGTATGCTC+TGG 0.541662 8_3:+69422877 None:intergenic
CCCACTTCTATATGTCTGCA+TGG 0.542803 8_3:-69421016 Msa1305800:three_prime_UTR
CTAACCTTATTAAAATGGGG+TGG 0.544581 8_3:-69421537 Msa1305800:three_prime_UTR
TGAAGATGTTACTTCCAGCT+TGG 0.553773 8_3:-69423583 Msa1305800:intron
ATGAAGGTGTCAAAAGATCT+GGG 0.554191 8_3:-69422610 Msa1305800:CDS
TCATATACCAGAGCATACTA+AGG 0.554759 8_3:-69422884 Msa1305800:CDS
TTCCTAACCTTATTAAAATG+GGG 0.556230 8_3:-69421540 Msa1305800:three_prime_UTR
TATTGAGGAGCTGAAACTGC+TGG 0.560970 8_3:-69422371 Msa1305800:CDS
AGTACAAGGTATATAGCGGT+CGG 0.562262 8_3:-69420736 Msa1305800:three_prime_UTR
GTACAAGGTATATAGCGGTC+GGG 0.562608 8_3:-69420735 Msa1305800:three_prime_UTR
TATTTACAGCAAGCGGTGAA+GGG 0.563134 8_3:+69422100 None:intergenic
TAATAGTTATTTACAGCAAG+CGG 0.565680 8_3:+69422093 None:intergenic
GAAGTATATCCATACCAAGC+TGG 0.566485 8_3:+69423569 None:intergenic
TTTATAATCGAAGTTTGTCA+AGG 0.566542 8_3:-69423475 Msa1305800:intron
AAAGCTCCTAACATCCATAC+AGG 0.567411 8_3:-69421635 Msa1305800:three_prime_UTR
GGTAGAATATGATATGGGGT+TGG 0.570375 8_3:-69422824 Msa1305800:CDS
GCGGAGTCAAGAGTTTCAAA+GGG 0.572722 8_3:-69422394 Msa1305800:CDS
TAGATGACTGATGAGATTAG+TGG 0.575372 8_3:-69420712 Msa1305800:three_prime_UTR
TATGGACCAGACAGATCAGA+TGG 0.577642 8_3:+69420809 None:intergenic
GTTGAAAGTGTCAAGAGTTG+AGG 0.580023 8_3:-69422761 Msa1305800:CDS
AATTTAATCAAATGAAAACA+AGG 0.581727 8_3:+69421799 None:intergenic
AATCCAGTCCCCTGAACCCA+TGG 0.582271 8_3:-69423307 Msa1305800:intron
ATTTAATCAAATGAAAACAA+GGG 0.588911 8_3:+69421800 None:intergenic
GTAGAGATTAGCATGAAAGT+CGG 0.592962 8_3:+69421496 None:intergenic
CCAAGTTAACAGAGGAGAGG+AGG 0.593009 8_3:-69421414 Msa1305800:three_prime_UTR
ATATAAGTTTGAATTAGAGA+AGG 0.594130 8_3:-69421732 Msa1305800:three_prime_UTR
ATTCTTTGCTGGCTCCTCTG+TGG 0.598825 8_3:+69421709 None:intergenic
AATGCAGAGGAACTGAAACC+AGG 0.603182 8_3:-69422646 Msa1305800:CDS
TTAATTATACTTTCAATGCG+TGG 0.605126 8_3:-69421897 Msa1305800:three_prime_UTR
ACTAGTTCTGGTGAATCAGG+TGG 0.606820 8_3:+69423402 None:intergenic
TATTGAAGAAAATAAGCTGA+AGG 0.613728 8_3:-69423439 Msa1305800:CDS
GGTCCAAGAAAAGTTCAAGT+CGG 0.614155 8_3:-69421042 Msa1305800:three_prime_UTR
GAGGAGGTTAAGCAATCAAG+AGG 0.616339 8_3:-69421398 Msa1305800:three_prime_UTR
TCGTCTAACCATGGGTTCAG+GGG 0.618454 8_3:+69423299 None:intergenic
CTCCTAATATAACAAACTTG+AGG 0.620387 8_3:+69420903 None:intergenic
ACTTGAGTCAAAGCTAAATG+AGG 0.624176 8_3:-69422314 Msa1305800:CDS
GTTCTTAGTCCAAAGCACAT+TGG 0.626743 8_3:-69423625 Msa1305800:CDS
GACCACAGTAAACAATGGAA+AGG 0.626884 8_3:-69422512 Msa1305800:CDS
TTTAATCAAATGAAAACAAG+GGG 0.626903 8_3:+69421801 None:intergenic
TCGTGATGCAGAGATTGAAG+AGG 0.628341 8_3:-69422860 Msa1305800:CDS
ACCATGCAGACATATAGAAG+TGG 0.631855 8_3:+69421015 None:intergenic
GTTTACACTCTTGATATCTG+GGG 0.632135 8_3:-69420963 Msa1305800:three_prime_UTR
GATGAACTCAGTAAAGGGTG+CGG 0.632166 8_3:-69422737 Msa1305800:CDS
GAGAGCCAAGAGAAGAAGCA+GGG 0.633793 8_3:-69422783 Msa1305800:CDS
TAAGACAGTAAAGAATGTTG+AGG 0.634008 8_3:-69422437 Msa1305800:CDS
TGAAGGTAGAATATGATATG+GGG 0.634862 8_3:-69422828 Msa1305800:CDS
AACAATATCCAAGTTAACAG+AGG 0.640525 8_3:-69421422 Msa1305800:three_prime_UTR
ACTAATCAATTGAGTTCACA+GGG 0.640770 8_3:+69420643 None:intergenic
TGAAGAAAATAAGCTGAAGG+TGG 0.641027 8_3:-69423436 Msa1305800:CDS
TTTACACTCTTGATATCTGG+GGG 0.641415 8_3:-69420962 Msa1305800:three_prime_UTR
CCATGCAGACATATAGAAGT+GGG 0.643537 8_3:+69421016 None:intergenic
GAACTCAGTAAAGGGTGCGG+AGG 0.643899 8_3:-69422734 Msa1305800:CDS
CTAGTTCTGGTGAATCAGGT+GGG 0.646582 8_3:+69423403 None:intergenic
CATTTGACCACAGTAAACAA+TGG 0.650155 8_3:-69422517 Msa1305800:CDS
TATCCAAGTTAACAGAGGAG+AGG 0.652511 8_3:-69421417 Msa1305800:three_prime_UTR
GCTGGAAGTAACATCTTCAG+TGG 0.653214 8_3:+69423587 None:intergenic
TGAATTAGAGAAGGCCACAG+AGG 0.653557 8_3:-69421723 Msa1305800:three_prime_UTR
CAGTTACAATGCAAGCACAA+CGG 0.657510 8_3:-69423680 Msa1305800:CDS
GTAAAGGTACAGATAGTACA+AGG 0.666698 8_3:-69420750 Msa1305800:three_prime_UTR
TAACCAAAATCTTGACAAGG+TGG 0.668289 8_3:+69422192 None:intergenic
ACTTCTATATGTCTGCATGG+TGG 0.671243 8_3:-69421013 Msa1305800:three_prime_UTR
CTTGCACACCAAATCTTCAG+GGG 0.675637 8_3:+69423653 None:intergenic
ATTGTTACTCCAGACTACAA+AGG 0.682862 8_3:+69421439 None:intergenic
AGATAGTACAAGGTATATAG+CGG 0.684320 8_3:-69420740 Msa1305800:three_prime_UTR
TAATAACCAAAATCTTGACA+AGG 0.687571 8_3:+69422189 None:intergenic
AATCACAGTAAAGAAAGCAG+AGG 0.689548 8_3:-69422584 Msa1305800:CDS
AATCACAGTAAAGAATGCAG+AGG 0.689548 8_3:-69422659 Msa1305800:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATTAAATTTTTAAATTATA+TGG - chr8_3:69423467-69423486 Msa1305800:intron 0.0%
!!! TTATTTTCTCAGATTATTAT+CGG + chr8_3:69420845-69420864 None:intergenic 15.0%
!! GTTAATATTCAAAAAACTTA+TGG + chr8_3:69421536-69421555 None:intergenic 15.0%
!! AAAAACAGAAATAAAATTAG+GGG + chr8_3:69421617-69421636 None:intergenic 15.0%
!! GAAAAACAGAAATAAAATTA+GGG + chr8_3:69421618-69421637 None:intergenic 15.0%
!! AGAAAAACAGAAATAAAATT+AGG + chr8_3:69421619-69421638 None:intergenic 15.0%
!!! CTTATTATATATTTTGTATC+TGG - chr8_3:69421793-69421812 Msa1305800:three_prime_UTR 15.0%
!! AAAAAAAATTCACAATAGAA+TGG + chr8_3:69423063-69423082 None:intergenic 15.0%
!!! AAAAACTTGTTTAAATTAGT+AGG - chr8_3:69423284-69423303 Msa1305800:intron 15.0%
!! ATTTAATCAAATGAAAACAA+GGG + chr8_3:69423543-69423562 None:intergenic 15.0%
!! AATTTAATCAAATGAAAACA+AGG + chr8_3:69423544-69423563 None:intergenic 15.0%
!!! AAATGAAAACTAAATTTTAC+AGG + chr8_3:69424225-69424244 None:intergenic 15.0%
!! AATTCATAGGTATATATTCT+TGG - chr8_3:69420771-69420790 Msa1305800:three_prime_UTR 20.0%
!! ATAAGTTGTTTATTCAAACA+AGG - chr8_3:69421271-69421290 Msa1305800:intron 20.0%
!!! ATTTTTGGATATTCATTGAA+TGG - chr8_3:69421414-69421433 Msa1305800:three_prime_UTR 20.0%
!!! AATTATCTTTCTAAAGGATT+TGG + chr8_3:69422131-69422150 None:intergenic 20.0%
!!! AAATCCTTTAGAAAGATAAT+TGG - chr8_3:69422130-69422149 Msa1305800:three_prime_UTR 20.0%
!! CAAATTTCAAGAACATTATA+TGG + chr8_3:69422403-69422422 None:intergenic 20.0%
!! TTTAATCAAATGAAAACAAG+GGG + chr8_3:69423542-69423561 None:intergenic 20.0%
!! ATATAAGTTTGAATTAGAGA+AGG - chr8_3:69423608-69423627 Msa1305800:CDS 20.0%
!! CGATACTTTGTATATAATAT+TGG - chr8_3:69423753-69423772 Msa1305800:intron 20.0%
!! TTTCCTAACCTTATTAAAAT+GGG - chr8_3:69423799-69423818 Msa1305800:intron 20.0%
!!! AGTAAATAGTAATGTTTTTG+TGG - chr8_3:69424018-69424037 Msa1305800:intron 20.0%
!!! GTAAATAGTAATGTTTTTGT+GGG - chr8_3:69424019-69424038 Msa1305800:intron 20.0%
!! TAAATTTACATGAAAAAGTG+CGG + chr8_3:69424173-69424192 None:intergenic 20.0%
!!! AAATTTTACAGGCTTAATAA+GGG + chr8_3:69424214-69424233 None:intergenic 20.0%
!!! TAAATTTTACAGGCTTAATA+AGG + chr8_3:69424215-69424234 None:intergenic 20.0%
! AATTACAGCACATTAATCAA+TGG + chr8_3:69420513-69420532 None:intergenic 25.0%
!! ATCGCATTTCTTTCAATTTT+TGG - chr8_3:69420623-69420642 Msa1305800:three_prime_UTR 25.0%
!!! AATCGTTTTTGTATGTTTTC+AGG - chr8_3:69420676-69420695 Msa1305800:three_prime_UTR 25.0%
!! TTGAAATTTTCAATCAGACT+TGG - chr8_3:69421015-69421034 Msa1305800:three_prime_UTR 25.0%
!! TGAAATTTTCAATCAGACTT+GGG - chr8_3:69421016-69421035 Msa1305800:three_prime_UTR 25.0%
!!! TTGTTTTTCGTAAGTTATCT+TGG + chr8_3:69421154-69421173 None:intergenic 25.0%
! TGATATCAACAAGAACAATA+AGG + chr8_3:69421297-69421316 None:intergenic 25.0%
! TTAAAACTCTATTGAGAGTA+AGG - chr8_3:69421371-69421390 Msa1305800:intron 25.0%
! GACTTAAATTTGTCATGTTA+GGG - chr8_3:69421436-69421455 Msa1305800:three_prime_UTR 25.0%
! ACTTAAATTTGTCATGTTAG+GGG - chr8_3:69421437-69421456 Msa1305800:three_prime_UTR 25.0%
! TTTATAATCGAAGTTTGTCA+AGG - chr8_3:69421865-69421884 Msa1305800:three_prime_UTR 25.0%
! TATTGAAGAAAATAAGCTGA+AGG - chr8_3:69421901-69421920 Msa1305800:three_prime_UTR 25.0%
! ACTTCCAATTATCTTTCTAA+AGG + chr8_3:69422137-69422156 None:intergenic 25.0%
! ATTTGAAAATTACCTTGCTA+TGG - chr8_3:69422215-69422234 Msa1305800:exon 25.0%
! ATAATCCAACATATACACAA+AGG + chr8_3:69422350-69422369 None:intergenic 25.0%
! GTAATTGATAAGTAGAAGTT+GGG + chr8_3:69422379-69422398 None:intergenic 25.0%
! TAATGTTCTTGAAATTTGTC+AGG - chr8_3:69422405-69422424 Msa1305800:CDS 25.0%
! TAAAAAACCAGAGCATAATA+AGG - chr8_3:69422432-69422451 Msa1305800:CDS 25.0%
! TTGAAGGTAGAATATGATAT+GGG - chr8_3:69422511-69422530 Msa1305800:CDS 25.0%
!!! TTTGACTCTATTTCTTTTTC+TGG + chr8_3:69422862-69422881 None:intergenic 25.0%
!!! TTTTAACTTCATCTCTTCAA+TGG + chr8_3:69422998-69423017 None:intergenic 25.0%
! AAAAATTCACAATAGAATGG+TGG + chr8_3:69423060-69423079 None:intergenic 25.0%
! TAATAACCAAAATCTTGACA+AGG + chr8_3:69423154-69423173 None:intergenic 25.0%
! ATTGAAAACATATGACCAAA+AGG + chr8_3:69423195-69423214 None:intergenic 25.0%
! TAATAGTTATTTACAGCAAG+CGG + chr8_3:69423250-69423269 None:intergenic 25.0%
! GCAAGATAGTGAAATATAAT+TGG + chr8_3:69423369-69423388 None:intergenic 25.0%
! TATATTTCACTATCTTGCTA+TGG - chr8_3:69423371-69423390 Msa1305800:CDS 25.0%
! TTAATTATACTTTCAATGCG+TGG - chr8_3:69423443-69423462 Msa1305800:CDS 25.0%
!! AAGAATCTTTTTGGATGTAT+AGG - chr8_3:69423648-69423667 Msa1305800:CDS 25.0%
!! AGAATCTTTTTGGATGTATA+GGG - chr8_3:69423649-69423668 Msa1305800:CDS 25.0%
!! ATCGATAAACATTTTCACAT+AGG + chr8_3:69423737-69423756 None:intergenic 25.0%
! GTTTCCTAACCTTATTAAAA+TGG - chr8_3:69423798-69423817 Msa1305800:intron 25.0%
! TTCCTAACCTTATTAAAATG+GGG - chr8_3:69423800-69423819 Msa1305800:intron 25.0%
! TAAGTTCATTTCAACATATG+CGG + chr8_3:69424146-69424165 None:intergenic 25.0%
! ATGTAAATTTAGTCCTCTTT+AGG - chr8_3:69424182-69424201 Msa1305800:intron 25.0%
! TGTAAATTTAGTCCTCTTTA+GGG - chr8_3:69424183-69424202 Msa1305800:intron 25.0%
!! AATTTTACAGGCTTAATAAG+GGG + chr8_3:69424213-69424232 None:intergenic 25.0%
!!! GTTTTCATTTTAGAAACTCA+AGG - chr8_3:69424235-69424254 Msa1305800:intron 25.0%
!!! GTTTGTTATATTAGGAGTTT+AGG - chr8_3:69424443-69424462 Msa1305800:intron 25.0%
ACTATGAAGCACAAATACTT+TGG + chr8_3:69420932-69420951 None:intergenic 30.0%
! GAAATTTTCAATCAGACTTG+GGG - chr8_3:69421017-69421036 Msa1305800:three_prime_UTR 30.0%
!!! ACTGGCATAAGTTTTTTAGA+CGG - chr8_3:69421057-69421076 Msa1305800:three_prime_UTR 30.0%
GAACTTATGAAAGTAGCTTA+CGG - chr8_3:69421087-69421106 Msa1305800:intron 30.0%
TTCTTGTTGATATCAGTTAG+AGG - chr8_3:69421302-69421321 Msa1305800:intron 30.0%
TTTAATTGCATCAACGATCA+AGG + chr8_3:69421339-69421358 None:intergenic 30.0%
GGACTTAAATTTGTCATGTT+AGG - chr8_3:69421435-69421454 Msa1305800:three_prime_UTR 30.0%
CATGAAAAAGTTCAGATACA+TGG - chr8_3:69421995-69422014 Msa1305800:three_prime_UTR 30.0%
AACGTCTATGAAAGAAAAAG+AGG + chr8_3:69422108-69422127 None:intergenic 30.0%
CGTAATTGATAAGTAGAAGT+TGG + chr8_3:69422380-69422399 None:intergenic 30.0%
ATATGAACCTTATTATGCTC+TGG + chr8_3:69422442-69422461 None:intergenic 30.0%
GTTGAAGGTAGAATATGATA+TGG - chr8_3:69422510-69422529 Msa1305800:CDS 30.0%
TGAAGGTAGAATATGATATG+GGG - chr8_3:69422512-69422531 Msa1305800:CDS 30.0%
GAAACCACAGAAAAAAATAG+AGG - chr8_3:69422633-69422652 Msa1305800:CDS 30.0%
!!! TGTACCTCTATTTTTTTCTG+TGG + chr8_3:69422640-69422659 None:intergenic 30.0%
TACTGTCTTAATCACTGTAT+CGG + chr8_3:69422893-69422912 None:intergenic 30.0%
TAAGACAGTAAAGAATGTTG+AGG - chr8_3:69422903-69422922 Msa1305800:CDS 30.0%
GAGATGAAGTTAAAACTAGA+TGG - chr8_3:69423003-69423022 Msa1305800:intron 30.0%
! TTGAGATTTGAGATGTTAGT+TGG - chr8_3:69423216-69423235 Msa1305800:intron 30.0%
!! GCTTGCTGTAAATAACTATT+AGG - chr8_3:69423249-69423268 Msa1305800:intron 30.0%
! GAATCTTTTTGGATGTATAG+GGG - chr8_3:69423650-69423669 Msa1305800:CDS 30.0%
AACAATATCCAAGTTAACAG+AGG - chr8_3:69423918-69423937 Msa1305800:intron 30.0%
ACTTAAAAATTCCTCCAAAC+TGG + chr8_3:69424072-69424091 None:intergenic 30.0%
!!! GAATTTTTAAGTGCACTTGT+AGG - chr8_3:69424080-69424099 Msa1305800:intron 30.0%
TCAAAATGTTAGTATCTTCC+TGG + chr8_3:69424413-69424432 None:intergenic 30.0%
!! TGCCTCAAGTTTGTTATATT+AGG - chr8_3:69424435-69424454 Msa1305800:intron 30.0%
CTCCTAATATAACAAACTTG+AGG + chr8_3:69424440-69424459 None:intergenic 30.0%
! CAGTGATTTTTCTATACTTG+AGG - chr8_3:69424497-69424516 Msa1305800:intron 30.0%
AGATAGTACAAGGTATATAG+CGG - chr8_3:69424600-69424619 Msa1305800:intron 30.0%
ACTAATCAATTGAGTTCACA+GGG + chr8_3:69424700-69424719 None:intergenic 30.0%
TACTAATCAATTGAGTTCAC+AGG + chr8_3:69424701-69424720 None:intergenic 30.0%
!!! TTAGTAGTTTTGTTGAGTTG+TGG - chr8_3:69424715-69424734 Msa1305800:intron 30.0%
!! CAAGTGCAACTATTTTTCAA+AGG + chr8_3:69424815-69424834 None:intergenic 30.0%
AAATTCATTCATAGTTCGTC+AGG + chr8_3:69424840-69424859 None:intergenic 30.0%
ACGAACTATGAATGAATTTG+AGG - chr8_3:69424841-69424860 Msa1305800:intron 30.0%
CGAACTATGAATGAATTTGA+GGG - chr8_3:69424842-69424861 Msa1305800:intron 30.0%
GAAGAAACAAAGTTCGTGTA+CGG - chr8_3:69420554-69420573 Msa1305800:three_prime_UTR 35.0%
GGTCGAACTGAATATTTCTT+AGG + chr8_3:69420716-69420735 None:intergenic 35.0%
TATTCAGTTCGACCAAATGT+TGG - chr8_3:69420722-69420741 Msa1305800:three_prime_UTR 35.0%
TGTTTGTTTGTTTGCTTGCT+TGG - chr8_3:69420799-69420818 Msa1305800:three_prime_UTR 35.0%
ACTTTGGATTAAGCGTAACA+AGG + chr8_3:69420916-69420935 None:intergenic 35.0%
! GCTTGTTTGAGTTTATCTAC+TGG - chr8_3:69421039-69421058 Msa1305800:three_prime_UTR 35.0%
! TCGTTGTGGTGGTTAATTTT+TGG - chr8_3:69421399-69421418 Msa1305800:three_prime_UTR 35.0%
TCAAAAAACTTATGGCTGCA+AGG + chr8_3:69421528-69421547 None:intergenic 35.0%
TAATCGAAGTTTGTCAAGGA+TGG - chr8_3:69421869-69421888 Msa1305800:three_prime_UTR 35.0%
TGAAGAAAATAAGCTGAAGG+TGG - chr8_3:69421904-69421923 Msa1305800:three_prime_UTR 35.0%
TTCTTTGAGTCTCCATTAAC+AGG + chr8_3:69421965-69421984 None:intergenic 35.0%
GTTAATGGAGACTCAAAGAA+TGG - chr8_3:69421965-69421984 Msa1305800:three_prime_UTR 35.0%
ATGAAGTTTCGTCTAACCAT+GGG + chr8_3:69422052-69422071 None:intergenic 35.0%
AGACGAAACTTCATGATGTT+TGG - chr8_3:69422058-69422077 Msa1305800:three_prime_UTR 35.0%
GTCTATGAAAGAAAAAGAGG+CGG + chr8_3:69422105-69422124 None:intergenic 35.0%
! TGAATTTTCTTTAGTCCCCT+GGG - chr8_3:69422258-69422277 Msa1305800:CDS 35.0%
TTCAAAGAATTTCATCCCAG+GGG + chr8_3:69422276-69422295 None:intergenic 35.0%
GTTCAAAGAATTTCATCCCA+GGG + chr8_3:69422277-69422296 None:intergenic 35.0%
TGTTGCCTTTGTGTATATGT+TGG - chr8_3:69422342-69422361 Msa1305800:CDS 35.0%
TCATATACCAGAGCATACTA+AGG - chr8_3:69422456-69422475 Msa1305800:CDS 35.0%
TTGGATGCTATTAAGGATGT+AGG - chr8_3:69422535-69422554 Msa1305800:CDS 35.0%
AATCACAGTAAAGAATGCAG+AGG - chr8_3:69422681-69422700 Msa1305800:CDS 35.0%
!! ATGAAGGTGTCAAAAGATCT+GGG - chr8_3:69422730-69422749 Msa1305800:CDS 35.0%
AATCACAGTAAAGAAAGCAG+AGG - chr8_3:69422756-69422775 Msa1305800:CDS 35.0%
CATTTGACCACAGTAAACAA+TGG - chr8_3:69422823-69422842 Msa1305800:CDS 35.0%
!! AAGAGTTTCAAAGGGTATTG+AGG - chr8_3:69422954-69422973 Msa1305800:intron 35.0%
ACTTGAGTCAAAGCTAAATG+AGG - chr8_3:69423026-69423045 Msa1305800:intron 35.0%
TAACCAAAATCTTGACAAGG+TGG + chr8_3:69423151-69423170 None:intergenic 35.0%
! TTTTGTCTTAGCACTCCTTT+TGG - chr8_3:69423177-69423196 Msa1305800:intron 35.0%
AAATGAAAACAAGGGGAAAG+TGG + chr8_3:69423535-69423554 None:intergenic 35.0%
CATCCAAAAAGATTCTTTGC+TGG + chr8_3:69423645-69423664 None:intergenic 35.0%
TGATGAAGCAATTGAGCATA+TGG - chr8_3:69423776-69423795 Msa1305800:intron 35.0%
!! CACCCCATTTTAATAAGGTT+AGG + chr8_3:69423805-69423824 None:intergenic 35.0%
CTAACCTTATTAAAATGGGG+TGG - chr8_3:69423803-69423822 Msa1305800:intron 35.0%
!! ACATCCACCCCATTTTAATA+AGG + chr8_3:69423810-69423829 None:intergenic 35.0%
TAGAGATTAGCATGAAAGTC+GGG + chr8_3:69423846-69423865 None:intergenic 35.0%
GTAGAGATTAGCATGAAAGT+CGG + chr8_3:69423847-69423866 None:intergenic 35.0%
! TTTTTGCTTCCTTTGTAGTC+TGG - chr8_3:69423892-69423911 Msa1305800:intron 35.0%
ATTGTTACTCCAGACTACAA+AGG + chr8_3:69423904-69423923 None:intergenic 35.0%
TTCTTGCCATATTACCAGTT+TGG - chr8_3:69424055-69424074 Msa1305800:intron 35.0%
ATTCCTCCAAACTGGTAATA+TGG + chr8_3:69424064-69424083 None:intergenic 35.0%
!! TCATTTTAGAAACTCAAGGC+TGG - chr8_3:69424239-69424258 Msa1305800:intron 35.0%
!!! CTGGCTTGTTTTATATTTGC+AGG - chr8_3:69424258-69424277 Msa1305800:intron 35.0%
! CCAGATATCAAGAGTGTAAA+CGG + chr8_3:69424378-69424397 None:intergenic 35.0%
CGTTTACACTCTTGATATCT+GGG - chr8_3:69424376-69424395 Msa1305800:intron 35.0%
GTTTACACTCTTGATATCTG+GGG - chr8_3:69424377-69424396 Msa1305800:intron 35.0%
TTTACACTCTTGATATCTGG+GGG - chr8_3:69424378-69424397 Msa1305800:intron 35.0%
ATACAAACGCAACGTGATTA+TGG + chr8_3:69424552-69424571 None:intergenic 35.0%
GCAGAATTTCTCACTTGTAA+AGG - chr8_3:69424574-69424593 Msa1305800:intron 35.0%
! GTAAAGGTACAGATAGTACA+AGG - chr8_3:69424590-69424609 Msa1305800:intron 35.0%
TAGATGACTGATGAGATTAG+TGG - chr8_3:69424628-69424647 Msa1305800:intron 35.0%
TGATGAGATTAGTGGAAAAC+TGG - chr8_3:69424636-69424655 Msa1305800:intron 35.0%
! ATGAATTTGAGGGTCCTTTT+TGG - chr8_3:69424852-69424871 Msa1305800:intron 35.0%
ATGATACCTTGAAAGCGACA+TGG + chr8_3:69420605-69420624 None:intergenic 40.0%
! ATGAATTCGCCAGTAGCTTT+TGG + chr8_3:69420758-69420777 None:intergenic 40.0%
AAAGCTACTGGCGAATTCAT+AGG - chr8_3:69420758-69420777 Msa1305800:three_prime_UTR 40.0%
CATATGAGTATGTGTCGTGT+CGG - chr8_3:69420880-69420899 Msa1305800:three_prime_UTR 40.0%
GATTAAGCGTAACAAGGTGT+TGG + chr8_3:69420910-69420929 None:intergenic 40.0%
AGAGTAAGGTTTAGTCGTTG+TGG - chr8_3:69421385-69421404 Msa1305800:three_prime_UTR 40.0%
CAGTTACAATGCAAGCACAA+CGG - chr8_3:69421660-69421679 Msa1305800:three_prime_UTR 40.0%
AGTTACAATGCAAGCACAAC+GGG - chr8_3:69421661-69421680 Msa1305800:three_prime_UTR 40.0%
GTTCTTAGTCCAAAGCACAT+TGG - chr8_3:69421715-69421734 Msa1305800:three_prime_UTR 40.0%
! TGAAGATGTTACTTCCAGCT+TGG - chr8_3:69421757-69421776 Msa1305800:three_prime_UTR 40.0%
! ATGTTACTTCCAGCTTGGTA+TGG - chr8_3:69421762-69421781 Msa1305800:three_prime_UTR 40.0%
GAAGTATATCCATACCAAGC+TGG + chr8_3:69421774-69421793 None:intergenic 40.0%
CCATTAACAGGAACTAGTTC+TGG + chr8_3:69421953-69421972 None:intergenic 40.0%
CCAGAACTAGTTCCTGTTAA+TGG - chr8_3:69421950-69421969 Msa1305800:three_prime_UTR 40.0%
CATGAAGTTTCGTCTAACCA+TGG + chr8_3:69422053-69422072 None:intergenic 40.0%
AGTCTTAGTCACACACTCTA+AGG - chr8_3:69422154-69422173 Msa1305800:three_prime_UTR 40.0%
GTCTTAGTCACACACTCTAA+GGG - chr8_3:69422155-69422174 Msa1305800:three_prime_UTR 40.0%
! GTGAATTTTCTTTAGTCCCC+TGG - chr8_3:69422257-69422276 Msa1305800:CDS 40.0%
CGTTCAAAGAATTTCATCCC+AGG + chr8_3:69422278-69422297 None:intergenic 40.0%
TGCAGAGATTGAAGAGGATA+TGG - chr8_3:69422486-69422505 Msa1305800:CDS 40.0%
TGAAGAGGATATGGAGTTGA+AGG - chr8_3:69422495-69422514 Msa1305800:CDS 40.0%
GGTAGAATATGATATGGGGT+TGG - chr8_3:69422516-69422535 Msa1305800:CDS 40.0%
TATGGGGTTGGATGCTATTA+AGG - chr8_3:69422528-69422547 Msa1305800:CDS 40.0%
!! GTTGAAAGTGTCAAGAGTTG+AGG - chr8_3:69422579-69422598 Msa1305800:CDS 40.0%
TGAGGAGATGAACTCAGTAA+AGG - chr8_3:69422597-69422616 Msa1305800:CDS 40.0%
GAGGAGATGAACTCAGTAAA+GGG - chr8_3:69422598-69422617 Msa1305800:CDS 40.0%
GGTACAAGTCTCAAAAGATC+TGG - chr8_3:69422654-69422673 Msa1305800:CDS 40.0%
!! GATGAAGGTGTCAAAAGATC+TGG - chr8_3:69422729-69422748 Msa1305800:CDS 40.0%
! TTCAAGTCTGCTTCTTTTCC+AGG + chr8_3:69422790-69422809 None:intergenic 40.0%
GACCACAGTAAACAATGGAA+AGG - chr8_3:69422828-69422847 Msa1305800:CDS 40.0%
TGCCTTTCCATTGTTTACTG+TGG + chr8_3:69422833-69422852 None:intergenic 40.0%
ACTGAAGCCAGAAAAAGAAG+CGG - chr8_3:69422927-69422946 Msa1305800:intron 40.0%
TATTTACAGCAAGCGGTGAA+GGG + chr8_3:69423243-69423262 None:intergenic 40.0%
TTATTTACAGCAAGCGGTGA+AGG + chr8_3:69423244-69423263 None:intergenic 40.0%
! GAGCCAGCAAAGAATCTTTT+TGG - chr8_3:69423639-69423658 Msa1305800:CDS 40.0%
AAAGCTCCTAACATCCATAC+AGG - chr8_3:69423705-69423724 Msa1305800:intron 40.0%
ATTGAGCCTGTATGGATGTT+AGG + chr8_3:69423714-69423733 None:intergenic 40.0%
TATCCAAGTTAACAGAGGAG+AGG - chr8_3:69423923-69423942 Msa1305800:intron 40.0%
TTGCCATATTACCAGTTTGG+AGG - chr8_3:69424058-69424077 Msa1305800:intron 40.0%
CAGGCAGATCTCATTAATAC+AGG - chr8_3:69424277-69424296 Msa1305800:intron 40.0%
GGTCCAAGAAAAGTTCAAGT+CGG - chr8_3:69424298-69424317 Msa1305800:intron 40.0%
GTCCAAGAAAAGTTCAAGTC+GGG - chr8_3:69424299-69424318 Msa1305800:intron 40.0%
!! AACCCGACTTGAACTTTTCT+TGG + chr8_3:69424304-69424323 None:intergenic 40.0%
CCATGCAGACATATAGAAGT+GGG + chr8_3:69424327-69424346 None:intergenic 40.0%
ACCATGCAGACATATAGAAG+TGG + chr8_3:69424328-69424347 None:intergenic 40.0%
ACTTCTATATGTCTGCATGG+TGG - chr8_3:69424327-69424346 Msa1305800:intron 40.0%
GCACTTATCTGTGTCTTCTT+GGG - chr8_3:69424349-69424368 Msa1305800:intron 40.0%
CCGTTTACACTCTTGATATC+TGG - chr8_3:69424375-69424394 Msa1305800:intron 40.0%
AGTACAAGGTATATAGCGGT+CGG - chr8_3:69424604-69424623 Msa1305800:intron 40.0%
CAATTGAGTTCACAGGGAAA+AGG + chr8_3:69424694-69424713 None:intergenic 40.0%
ACAAAGTTCGTGTACGGTTC+AGG - chr8_3:69420560-69420579 Msa1305800:three_prime_UTR 45.0%
CTTGAAAGCGACATGGTGAT+AGG + chr8_3:69420598-69420617 None:intergenic 45.0%
!! CTATCACCATGTCGCTTTCA+AGG - chr8_3:69420596-69420615 Msa1305800:three_prime_UTR 45.0%
GTAAGGTTTAGTCGTTGTGG+TGG - chr8_3:69421388-69421407 Msa1305800:three_prime_UTR 45.0%
CGTTGTGCTTGCATTGTAAC+TGG + chr8_3:69421662-69421681 None:intergenic 45.0%
CTTGCACACCAAATCTTCAG+GGG + chr8_3:69421690-69421709 None:intergenic 45.0%
CCTTGCACACCAAATCTTCA+GGG + chr8_3:69421691-69421710 None:intergenic 45.0%
TCCTTGCACACCAAATCTTC+AGG + chr8_3:69421692-69421711 None:intergenic 45.0%
CTGCATCAACCAATGTGCTT+TGG + chr8_3:69421727-69421746 None:intergenic 45.0%
GCTGGAAGTAACATCTTCAG+TGG + chr8_3:69421756-69421775 None:intergenic 45.0%
!! CTAGTTCTGGTGAATCAGGT+GGG + chr8_3:69421940-69421959 None:intergenic 45.0%
!! ACTAGTTCTGGTGAATCAGG+TGG + chr8_3:69421941-69421960 None:intergenic 45.0%
!! GGAACTAGTTCTGGTGAATC+AGG + chr8_3:69421944-69421963 None:intergenic 45.0%
TTCGTCTAACCATGGGTTCA+GGG + chr8_3:69422045-69422064 None:intergenic 45.0%
TTTCGTCTAACCATGGGTTC+AGG + chr8_3:69422046-69422065 None:intergenic 45.0%
TCACGAACCTTAGTATGCTC+TGG + chr8_3:69422466-69422485 None:intergenic 45.0%
TCGTGATGCAGAGATTGAAG+AGG - chr8_3:69422480-69422499 Msa1305800:CDS 45.0%
TTCAACCCTGCTTCTTCTCT+TGG + chr8_3:69422565-69422584 None:intergenic 45.0%
GATGAACTCAGTAAAGGGTG+CGG - chr8_3:69422603-69422622 Msa1305800:CDS 45.0%
AATGCAGAGGAACTGAAACC+AGG - chr8_3:69422694-69422713 Msa1305800:CDS 45.0%
GGAACTGAAACCAGGAAAAG+AGG - chr8_3:69422702-69422721 Msa1305800:CDS 45.0%
! TTCATCTCTGCCTCTTTTCC+TGG + chr8_3:69422715-69422734 None:intergenic 45.0%
AGGAAAAGAGGCAGAGATGA+AGG - chr8_3:69422714-69422733 Msa1305800:CDS 45.0%
AAAGCAGAGGAACTGAAACC+TGG - chr8_3:69422769-69422788 Msa1305800:CDS 45.0%
! CTTGACTCCGCTTCTTTTTC+TGG + chr8_3:69422937-69422956 None:intergenic 45.0%
AGCGGAGTCAAGAGTTTCAA+AGG - chr8_3:69422945-69422964 Msa1305800:intron 45.0%
GCGGAGTCAAGAGTTTCAAA+GGG - chr8_3:69422946-69422965 Msa1305800:intron 45.0%
TATTGAGGAGCTGAAACTGC+TGG - chr8_3:69422969-69422988 Msa1305800:intron 45.0%
! ACAGTAACTTGCGACTTGCT+AGG + chr8_3:69423116-69423135 None:intergenic 45.0%
! CTGCCACCTTGTCAAGATTT+TGG - chr8_3:69423145-69423164 Msa1305800:intron 45.0%
AGGGGAAAGTGGTGTGTATA+AGG + chr8_3:69423524-69423543 None:intergenic 45.0%
TGAATTAGAGAAGGCCACAG+AGG - chr8_3:69423617-69423636 Msa1305800:CDS 45.0%
CACATAGGATTGAGCCTGTA+TGG + chr8_3:69423722-69423741 None:intergenic 45.0%
GAGGAGGTTAAGCAATCAAG+AGG - chr8_3:69423942-69423961 Msa1305800:intron 45.0%
ATAAGGGGACATCCCTAAAG+AGG + chr8_3:69424198-69424217 None:intergenic 45.0%
CCCACTTCTATATGTCTGCA+TGG - chr8_3:69424324-69424343 Msa1305800:intron 45.0%
GGCACTTATCTGTGTCTTCT+TGG - chr8_3:69424348-69424367 Msa1305800:intron 45.0%
AATGCTCCATCTGATCTGTC+TGG - chr8_3:69424525-69424544 Msa1305800:intron 45.0%
TATGGACCAGACAGATCAGA+TGG + chr8_3:69424534-69424553 None:intergenic 45.0%
GTACAAGGTATATAGCGGTC+GGG - chr8_3:69424605-69424624 Msa1305800:intron 45.0%
!! CCCTGAAGATTTGGTGTGCA+AGG - chr8_3:69421688-69421707 Msa1305800:three_prime_UTR 50.0%
TCGTCTAACCATGGGTTCAG+GGG + chr8_3:69422044-69422063 None:intergenic 50.0%
AGATCTGCAGCTCCATAGCA+AGG + chr8_3:69422230-69422249 None:intergenic 50.0%
ACACAAAGGCAACATCAGCG+AGG + chr8_3:69422336-69422355 None:intergenic 50.0%
GAGAGCCAAGAGAAGAAGCA+GGG - chr8_3:69422557-69422576 Msa1305800:CDS 50.0%
!! ATTCTTTGCTGGCTCCTCTG+TGG + chr8_3:69423634-69423653 None:intergenic 50.0%
CCTCCTCTCCTCTGTTAACT+TGG + chr8_3:69423929-69423948 None:intergenic 50.0%
CCAAGTTAACAGAGGAGAGG+AGG - chr8_3:69423926-69423945 Msa1305800:intron 50.0%
GGCGCGAGAACTCCAACATT+TGG + chr8_3:69420737-69420756 None:intergenic 55.0%
GTTCTCGCGCCAAAAGCTAC+TGG - chr8_3:69420746-69420765 Msa1305800:three_prime_UTR 55.0%
ACGGGTAGCCCCTGAAGATT+TGG - chr8_3:69421679-69421698 Msa1305800:three_prime_UTR 55.0%
AATCCAGTCCCCTGAACCCA+TGG - chr8_3:69422033-69422052 Msa1305800:three_prime_UTR 55.0%
TAACCATGGGTTCAGGGGAC+TGG + chr8_3:69422039-69422058 None:intergenic 55.0%
GGAGAGCCAAGAGAAGAAGC+AGG - chr8_3:69422556-69422575 Msa1305800:CDS 55.0%
! GAACTCAGTAAAGGGTGCGG+AGG - chr8_3:69422606-69422625 Msa1305800:CDS 55.0%
ATCTGGGGGATCAGTCGTCC+AGG - chr8_3:69424392-69424411 Msa1305800:intron 60.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 69420481 69424881 69420481 ID=Msa1305800;Name=Msa1305800
chr8_3 mRNA 69420481 69424881 69420481 ID=Msa1305800-mRNA-1;Parent=Msa1305800;Name=Msa1305800-mRNA-1;_AED=0.15;_eAED=0.16;_QI=0|0.6|0.66|1|1|0.83|6|1452|338
chr8_3 exon 69420481 69421082 69420481 ID=Msa1305800-mRNA-1:exon:21511;Parent=Msa1305800-mRNA-1
chr8_3 exon 69421375 69422935 69421375 ID=Msa1305800-mRNA-1:exon:21510;Parent=Msa1305800-mRNA-1
chr8_3 exon 69423308 69423484 69423308 ID=Msa1305800-mRNA-1:exon:21509;Parent=Msa1305800-mRNA-1
chr8_3 exon 69423584 69423699 69423584 ID=Msa1305800-mRNA-1:exon:21508;Parent=Msa1305800-mRNA-1
chr8_3 exon 69424798 69424804 69424798 ID=Msa1305800-mRNA-1:exon:21507;Parent=Msa1305800-mRNA-1
chr8_3 exon 69424876 69424881 69424876 ID=Msa1305800-mRNA-1:exon:21506;Parent=Msa1305800-mRNA-1
chr8_3 CDS 69424876 69424881 69424876 ID=Msa1305800-mRNA-1:cds;Parent=Msa1305800-mRNA-1
chr8_3 CDS 69424798 69424804 69424798 ID=Msa1305800-mRNA-1:cds;Parent=Msa1305800-mRNA-1
chr8_3 CDS 69423584 69423699 69423584 ID=Msa1305800-mRNA-1:cds;Parent=Msa1305800-mRNA-1
chr8_3 CDS 69423308 69423484 69423308 ID=Msa1305800-mRNA-1:cds;Parent=Msa1305800-mRNA-1
chr8_3 CDS 69422225 69422935 69422225 ID=Msa1305800-mRNA-1:cds;Parent=Msa1305800-mRNA-1
chr8_3 three_prime_UTR 69421375 69422224 69421375 ID=Msa1305800-mRNA-1:three_prime_utr;Parent=Msa1305800-mRNA-1
chr8_3 three_prime_UTR 69420481 69421082 69420481 ID=Msa1305800-mRNA-1:three_prime_utr;Parent=Msa1305800-mRNA-1
Gene Sequence

>Msa1305800

ATGCTTAAACAAATTACAATGCAAGCACAACGGGTAGCCCCTGAAGATTTGGTGTGCAAGGACAAGTTCTTAGTCCAAAGCACATTGGTTGATGCAGAGATAACCACTGAAGATGTTACTTCCAGCTTGTTTGTCAAGGATGGACTGCGATATATTGAAGAAAATAAGCTGAAGGTGGCTCTGATTAGCCCACCTGATTCACCAGAACTAGTTCCTGTTAATGGAGACTCAAAGAATGGATTTCATCATGAAAAAGTTCAGATACATGGCAAAGACGAAATTGAAATCCAGTCCCCTGAACCCATGGTTCTTAAAAAACCAGAGCATAATAAGGTTCATATACCAGAGCATACTAAGGTTCGTGATGCAGAGATTGAAGAGGATATGGAGTTGAAGGTAGAATATGATATGGGGTTGGATGCTATTAAGGATGTAGGAGAGCCAAGAGAAGAAGCAGGGTTGAAAGTGTCAAGAGTTGAGGAGATGAACTCAGTAAAGGGTGCGGAGGAACTGAAACCACAGAAAAAAATAGAGGTACAAGTCTCAAAAGATCTGGATTCAATCACAGTAAAGAATGCAGAGGAACTGAAACCAGGAAAAGAGGCAGAGATGAAGGTGTCAAAAGATCTGGGTTCAATCACAGTAAAGAAAGCAGAGGAACTGAAACCTGGAAAAGAAGCAGACTTGAATGTGTTAAAAGATCATTTGACCACAGTAAACAATGGAAAGGCACTGACGCCAGAAAAAGAAATAGAGTCAAAAGTGTCAACCGATACAGTGATTAAGACAGTAAAGAATGTTGAGGAACTGAAGCCAGAAAAAGAAGCGGAGTCAAGAGTTTCAAAGGGTATTGAGGAGCTGAAACTGCTGGAAGCCATTGAAGAGATGAAGTTAAAACTAGATGGACTTGAGTCAAAGCTAAATGAGGTCAGCATTCCACCATTCTATTGTGAATTTTTTTTTATCTGCTTGCTGTTGCATGTGACATGCTTCCTAGCAAGTCGCAAGTTACTGTAA
Protein sequence

>Msa1305800

MLKQITMQAQRVAPEDLVCKDKFLVQSTLVDAEITTEDVTSSLFVKDGLRYIEENKLKVALISPPDSPELVPVNGDSKNGFHHEKVQIHGKDEIEIQSPEPMVLKKPEHNKVHIPEHTKVRDAEIEEDMELKVEYDMGLDAIKDVGEPREEAGLKVSRVEEMNSVKGAEELKPQKKIEVQVSKDLDSITVKNAEELKPGKEAEMKVSKDLGSITVKKAEELKPGKEADLNVLKDHLTTVNNGKALTPEKEIESKVSTDTVIKTVKNVEELKPEKEAESRVSKGIEELKLLEAIEEMKLKLDGLESKLNEVSIPPFYCEFFFICLLLHVTCFLASRKLL*