Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307030 | sp|O65154|KIWI_ARATH | 42.529 | 87 | 39 | 2 | 122 | 197 | 19 | 105 | 3.75e-14 | 68.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307030 | A0A1S2YCU2 | 50.000 | 122 | 41 | 4 | 98 | 199 | 24 | 145 | 6.49e-24 | 102 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0117710 | Msa1307030 | 0.828615 | 8.145975e-55 | -8.615850e-47 |
| Msa1307030 | Msa1362670 | 0.905508 | 3.987534e-80 | -8.615850e-47 |
| Msa1307030 | Msa1391280 | 0.876771 | 1.071176e-68 | -8.615850e-47 |
| Msa1075650 | Msa1307030 | 0.822049 | 2.916288e-53 | -8.615850e-47 |
| Msa1117170 | Msa1307030 | 0.805150 | 1.533484e-49 | -8.615850e-47 |
| Msa1152440 | Msa1307030 | 0.802315 | 5.946205e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307030 | MtrunA17_Chr3g0130571 | 50.000 | 106 | 37 | 3 | 110 | 199 | 36 | 141 | 1.47e-23 | 91.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1307030 | AT5G09250.1 | 42.529 | 87 | 39 | 2 | 122 | 197 | 19 | 105 | 3.81e-15 | 68.6 |
| Msa1307030 | AT5G09250.3 | 51.724 | 58 | 28 | 0 | 142 | 199 | 53 | 110 | 1.10e-12 | 62.4 |
| Msa1307030 | AT5G09250.4 | 43.056 | 72 | 30 | 2 | 122 | 182 | 19 | 90 | 1.08e-11 | 60.1 |
Find 52 sgRNAs with CRISPR-Local
Find 285 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCACTCAATGAGGACTCTT+AGG | 0.366094 | 8_4:-2182337 | None:intergenic |
| CGCGAATATTACTTAAAAGA+TGG | 0.404513 | 8_4:-2184978 | Msa1307030:CDS |
| AGCATTGGAACGAAGGGATT+CGG | 0.424874 | 8_4:-2185010 | Msa1307030:CDS |
| AATAGGTCTGGAACTGAAAA+GGG | 0.449012 | 8_4:-2185220 | Msa1307030:CDS |
| GAAAAGGAGAAGAAGAGGTC+TGG | 0.454761 | 8_4:-2185421 | Msa1307030:CDS |
| GAAAAGGAGAAGAAGAGGTC+TGG | 0.454761 | 8_4:-2185475 | Msa1307030:CDS |
| GAAAAGGAGAAGAAGAGGTC+TGG | 0.454761 | 8_4:-2185529 | Msa1307030:CDS |
| GAAGAGGTCTGCAACTGAAA+AGG | 0.458649 | 8_4:-2185248 | Msa1307030:CDS |
| GAAGAGGTCTGCAACTGAAA+AGG | 0.458649 | 8_4:-2185302 | Msa1307030:CDS |
| CAACTGAAAAGGAGAAGAAT+AGG | 0.461723 | 8_4:-2185237 | Msa1307030:CDS |
| CAACTGAAAAGGAGAAGAAT+AGG | 0.461723 | 8_4:-2185291 | Msa1307030:CDS |
| GAATAGGTCTGGAACTGAAA+AGG | 0.466779 | 8_4:-2185221 | Msa1307030:CDS |
| GAACTGAAAAGGAGAAGAAT+AGG | 0.468877 | 8_4:-2185399 | Msa1307030:CDS |
| GAACTGAAAAGGAGAAGAAT+AGG | 0.468877 | 8_4:-2185453 | Msa1307030:CDS |
| GAACTGAAAAGGAGAAGAAT+AGG | 0.468877 | 8_4:-2185507 | Msa1307030:CDS |
| GAACTGAAAAGGAGAAGAAT+AGG | 0.468877 | 8_4:-2185561 | Msa1307030:CDS |
| AGAAATGCCTGGAACTGAAA+AGG | 0.469309 | 8_4:-2185572 | None:intergenic |
| GAATAGGTCTGGAACTGAAA+AGG | 0.472159 | 8_4:-2185275 | Msa1307030:CDS |
| GAATAGGTCTGGAACTGAAA+AGG | 0.472159 | 8_4:-2185329 | Msa1307030:intron |
| GAATAGGTCTGGAACTGAAA+AGG | 0.472159 | 8_4:-2185383 | Msa1307030:CDS |
| GAATAGGTCTGGAACTGAAA+AGG | 0.472159 | 8_4:-2185437 | Msa1307030:CDS |
| GAATAGGTCTGGAACTGAAA+AGG | 0.472159 | 8_4:-2185491 | Msa1307030:CDS |
| GAATAGGTCTGGAACTGAAA+AGG | 0.472159 | 8_4:-2185545 | Msa1307030:CDS |
| GAAAAGGAGAAGAATAGGTC+TGG | 0.477457 | 8_4:-2185232 | Msa1307030:CDS |
| GAAAAGGAGAAGAATAGGTC+TGG | 0.477457 | 8_4:-2185286 | Msa1307030:CDS |
| GAAAAGGAGAAGAATAGGTC+TGG | 0.477457 | 8_4:-2185394 | Msa1307030:CDS |
| GAAAAGGAGAAGAATAGGTC+TGG | 0.477457 | 8_4:-2185448 | Msa1307030:CDS |
| GAAAAGGAGAAGAATAGGTC+TGG | 0.477457 | 8_4:-2185502 | Msa1307030:CDS |
| GAAAAGGAGAAGAATAGGTC+TGG | 0.477457 | 8_4:-2185556 | Msa1307030:CDS |
| GGAAGGTTTCTGTGAAGCAT+TGG | 0.486433 | 8_4:-2185025 | Msa1307030:CDS |
| GAAGAGGTCTGGAACTGAAA+AGG | 0.498166 | 8_4:-2185410 | Msa1307030:CDS |
| GAAGAGGTCTGGAACTGAAA+AGG | 0.498166 | 8_4:-2185464 | Msa1307030:CDS |
| GAAGAGGTCTGGAACTGAAA+AGG | 0.498166 | 8_4:-2185518 | Msa1307030:CDS |
| AATCTTTATAGAGAAATGCC+TGG | 0.524021 | 8_4:-2185583 | None:intergenic |
| CTGTGAAGCATTGGAACGAA+GGG | 0.525495 | 8_4:-2185016 | Msa1307030:CDS |
| GACCATGTCGGAGTTGATGA+TGG | 0.532598 | 8_4:-2182388 | Msa1307030:CDS |
| GAACTGAAAAGGAGAAGAAG+AGG | 0.574608 | 8_4:-2185264 | Msa1307030:CDS |
| GAACTGAAAAGGAGAAGAAG+AGG | 0.574608 | 8_4:-2185318 | Msa1307030:CDS |
| GAACTGAAAAGGAGAAGAAG+AGG | 0.574608 | 8_4:-2185372 | Msa1307030:intron |
| GAACTGAAAAGGAGAAGAAG+AGG | 0.574608 | 8_4:-2185426 | Msa1307030:CDS |
| GAACTGAAAAGGAGAAGAAG+AGG | 0.574608 | 8_4:-2185480 | Msa1307030:CDS |
| GAACTGAAAAGGAGAAGAAG+AGG | 0.574608 | 8_4:-2185534 | Msa1307030:CDS |
| GAACTGAAAAGGGGAAGAAG+AGG | 0.586147 | 8_4:-2185210 | Msa1307030:CDS |
| TCTGTGAAGCATTGGAACGA+AGG | 0.589293 | 8_4:-2185017 | Msa1307030:CDS |
| CAACTCCGACATGGTCAATG+AGG | 0.600146 | 8_4:+2182395 | None:intergenic |
| ATGATGGTTCGTAATCACAT+TGG | 0.601069 | 8_4:-2182372 | Msa1307030:CDS |
| GCAGCTTGGGACAAAGAGGA+AGG | 0.602778 | 8_4:-2185042 | Msa1307030:intron |
| TAACGCAGCTTGGGACAAAG+AGG | 0.608874 | 8_4:-2185046 | Msa1307030:intron |
| AATTGACAATGCACTCAATG+AGG | 0.616344 | 8_4:-2182346 | Msa1307030:CDS |
| AACCATCATCAACTCCGACA+TGG | 0.642168 | 8_4:+2182386 | None:intergenic |
| AGGAACCTCATTGACCATGT+CGG | 0.644511 | 8_4:-2182400 | Msa1307030:CDS |
| ATAGGTCTGGAACTGAAAAG+GGG | 0.667488 | 8_4:-2185219 | Msa1307030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTAATAATACAACTAA+AGG | - | chr8_4:2184041-2184060 | Msa1307030:intron | 10.0% |
| !!! | TTTTTAATAATACAACTAAA+GGG | - | chr8_4:2184042-2184061 | Msa1307030:intron | 10.0% |
| !! | TTTATGAAATGTTGTTATAA+TGG | - | chr8_4:2182996-2183015 | Msa1307030:intron | 15.0% |
| !! | TTATGAAATGTTGTTATAAT+GGG | - | chr8_4:2182997-2183016 | Msa1307030:intron | 15.0% |
| !! | AATCACTTTATATAAAGATA+AGG | + | chr8_4:2183029-2183048 | None:intergenic | 15.0% |
| !! | AAATTTCCATAAAATTGAAT+TGG | + | chr8_4:2183122-2183141 | None:intergenic | 15.0% |
| !!! | ATTCAATTTTATGGAAATTT+TGG | - | chr8_4:2183122-2183141 | Msa1307030:intron | 15.0% |
| !!! | TTTTAATAATACAACTAAAG+GGG | - | chr8_4:2184043-2184062 | Msa1307030:intron | 15.0% |
| !! | AGTAATTGTAATCTTAATTT+CGG | + | chr8_4:2184594-2184613 | None:intergenic | 15.0% |
| !! | TTTAAAGAAAATAATGATGT+TGG | + | chr8_4:2184724-2184743 | None:intergenic | 15.0% |
| !!! | ATTTATTAAGTTTTTGTTCT+TGG | - | chr8_4:2185362-2185381 | Msa1307030:intron | 15.0% |
| !!! | ATGAATTGAAATACCTTTTT+TGG | + | chr8_4:2182968-2182987 | None:intergenic | 20.0% |
| !! | CAAAATTGATAAACAAAATC+AGG | + | chr8_4:2183089-2183108 | None:intergenic | 20.0% |
| !!! | GACAAAGGTTTTTTAAAAAA+AGG | - | chr8_4:2183196-2183215 | Msa1307030:intron | 20.0% |
| !!! | AAATGTGAGATTTGTTAATT+TGG | + | chr8_4:2183518-2183537 | None:intergenic | 20.0% |
| !!! | TGGTTTCTAGTTATTTTTTT+CGG | + | chr8_4:2183552-2183571 | None:intergenic | 20.0% |
| !!! | TGAATGTTGGATTTTTATTT+GGG | + | chr8_4:2183624-2183643 | None:intergenic | 20.0% |
| !!! | TTGAATGTTGGATTTTTATT+TGG | + | chr8_4:2183625-2183644 | None:intergenic | 20.0% |
| !!! | TTATATGTAGAATTGCATTT+TGG | - | chr8_4:2183801-2183820 | Msa1307030:intron | 20.0% |
| !!! | TATATGTAGAATTGCATTTT+GGG | - | chr8_4:2183802-2183821 | Msa1307030:intron | 20.0% |
| !!! | TTTAGAATGAATCAATGAAA+CGG | + | chr8_4:2184917-2184936 | None:intergenic | 20.0% |
| !!! | ATTGAAATACCTTTTTTGGT+AGG | + | chr8_4:2182964-2182983 | None:intergenic | 25.0% |
| ! | GTGATTGATGAAATGTTTAA+TGG | - | chr8_4:2183043-2183062 | Msa1307030:intron | 25.0% |
| ! | ATGTTTAATGGAATAGCAAA+TGG | - | chr8_4:2183055-2183074 | Msa1307030:intron | 25.0% |
| !! | TTGTCACCAATTCAATTTTA+TGG | - | chr8_4:2183113-2183132 | Msa1307030:intron | 25.0% |
| ! | CTGTTATGGTACATTATTAT+GGG | + | chr8_4:2183445-2183464 | None:intergenic | 25.0% |
| ! | TCTGTTATGGTACATTATTA+TGG | + | chr8_4:2183446-2183465 | None:intergenic | 25.0% |
| !! | ATTTGTTAATTTGGTAGGAA+AGG | + | chr8_4:2183509-2183528 | None:intergenic | 25.0% |
| !!! | TTAAAGTGCTTGTTGTTATT+TGG | + | chr8_4:2183572-2183591 | None:intergenic | 25.0% |
| ! | AAATAACAACAAGCACTTTA+AGG | - | chr8_4:2183571-2183590 | Msa1307030:intron | 25.0% |
| !!! | GAATGTTGGATTTTTATTTG+GGG | + | chr8_4:2183623-2183642 | None:intergenic | 25.0% |
| !! | GACAGTGAAATTTGTTTATA+TGG | - | chr8_4:2183646-2183665 | Msa1307030:intron | 25.0% |
| !! | CTTAGTAATATCTAGAACTT+TGG | - | chr8_4:2183670-2183689 | Msa1307030:intron | 25.0% |
| !! | ATATGTAGAATTGCATTTTG+GGG | - | chr8_4:2183803-2183822 | Msa1307030:intron | 25.0% |
| ! | AGGAAGTGAAAGTTATTTAT+TGG | - | chr8_4:2184081-2184100 | Msa1307030:intron | 25.0% |
| ! | TTACAATTACTTCCTTATCA+TGG | - | chr8_4:2184603-2184622 | Msa1307030:intron | 25.0% |
| ! | AAAGAAAATAATGATGTTGG+TGG | + | chr8_4:2184721-2184740 | None:intergenic | 25.0% |
| !! | GATTCATTCTAAAAGAGATA+AGG | - | chr8_4:2184924-2184943 | Msa1307030:intron | 25.0% |
| !! | ACAATTAAGGATTGGTAATA+AGG | + | chr8_4:2185126-2185145 | None:intergenic | 25.0% |
| !!! | TTTTGACCCAATTTACTTTT+AGG | - | chr8_4:2185204-2185223 | Msa1307030:CDS | 25.0% |
| ! | ACATTTGTATACTTTCTTTC+AGG | - | chr8_4:2185486-2185505 | Msa1307030:CDS | 25.0% |
| CGCGAATATTACTTAAAAGA+TGG | - | chr8_4:2182928-2182947 | Msa1307030:intron | 30.0% | |
| TGATGAAATTCAAAAGCCTA+AGG | - | chr8_4:2183171-2183190 | Msa1307030:intron | 30.0% | |
| TCGTATATTACAATCTTCCA+CGG | + | chr8_4:2183322-2183341 | None:intergenic | 30.0% | |
| ATAGAGAAAGGAGATGTATA+AGG | + | chr8_4:2183388-2183407 | None:intergenic | 30.0% | |
| !! | GTGAGATTTGTTAATTTGGT+AGG | + | chr8_4:2183514-2183533 | None:intergenic | 30.0% |
| ATTTCACTGTCATTGAATGT+TGG | + | chr8_4:2183637-2183656 | None:intergenic | 30.0% | |
| AATGCAATTCTTAGAATCCT+TGG | + | chr8_4:2183764-2183783 | None:intergenic | 30.0% | |
| ATTTGTGTTTACTAGCCAAA+TGG | - | chr8_4:2183847-2183866 | Msa1307030:intron | 30.0% | |
| ! | GTTGGTGGAGAAATATAATA+CGG | - | chr8_4:2183915-2183934 | Msa1307030:intron | 30.0% |
| TGAAAGTTATTTATTGGCGA+TGG | - | chr8_4:2184087-2184106 | Msa1307030:intron | 30.0% | |
| !! | TATTTATTGGCGATGGATTT+TGG | - | chr8_4:2184094-2184113 | Msa1307030:intron | 30.0% |
| !! | ATTTATTGGCGATGGATTTT+GGG | - | chr8_4:2184095-2184114 | Msa1307030:intron | 30.0% |
| !!! | AATTGTTTTTGGACTACTTG+CGG | - | chr8_4:2184217-2184236 | Msa1307030:intron | 30.0% |
| !! | TTTGAGATCTTGGTTGTTTT+TGG | - | chr8_4:2184825-2184844 | Msa1307030:intron | 30.0% |
| !!! | TTGAGATCTTGGTTGTTTTT+GGG | - | chr8_4:2184826-2184845 | Msa1307030:intron | 30.0% |
| TTTGAGTAATTGTGATTGAG+AGG | - | chr8_4:2184859-2184878 | Msa1307030:intron | 30.0% | |
| TAATTGTGATTGAGAGGAAA+AGG | - | chr8_4:2184865-2184884 | Msa1307030:intron | 30.0% | |
| ! | CAATTTTCAAACCTCTCAAA+TGG | + | chr8_4:2184951-2184970 | None:intergenic | 30.0% |
| !! | CATCACAACTTCTAAGATAA+TGG | + | chr8_4:2184976-2184995 | None:intergenic | 30.0% |
| CATTATCTTAGAAGTTGTGA+TGG | - | chr8_4:2184974-2184993 | Msa1307030:CDS | 30.0% | |
| ATACAGAGACAATTAAGGAT+TGG | + | chr8_4:2185134-2185153 | None:intergenic | 30.0% | |
| CAGTAATACAGAGACAATTA+AGG | + | chr8_4:2185139-2185158 | None:intergenic | 30.0% | |
| GACACACCTAAAAGTAAATT+GGG | + | chr8_4:2185213-2185232 | None:intergenic | 30.0% | |
| GAACTGAAAAGGAGAAGAAT+AGG | - | chr8_4:2182345-2182364 | Msa1307030:CDS | 35.0% | |
| GAACTGAAAAGGAGAAGAAT+AGG | - | chr8_4:2182345-2182364 | Msa1307030:CDS | 35.0% | |
| GAACTGAAAAGGAGAAGAAT+AGG | - | chr8_4:2182345-2182364 | Msa1307030:CDS | 35.0% | |
| GAACTGAAAAGGAGAAGAAT+AGG | - | chr8_4:2182345-2182364 | Msa1307030:CDS | 35.0% | |
| CAACTGAAAAGGAGAAGAAT+AGG | - | chr8_4:2182561-2182580 | Msa1307030:intron | 35.0% | |
| CAACTGAAAAGGAGAAGAAT+AGG | - | chr8_4:2182561-2182580 | Msa1307030:intron | 35.0% | |
| CAACTGAAAAGGAGAAGAAT+AGG | - | chr8_4:2182561-2182580 | Msa1307030:intron | 35.0% | |
| ! | AATAGGTCTGGAACTGAAAA+GGG | - | chr8_4:2182362-2182381 | Msa1307030:CDS | 35.0% |
| !! | TTGATTTGTTTAACGCAGCT+TGG | - | chr8_4:2182850-2182869 | Msa1307030:intron | 35.0% |
| !! | TGATTTGTTTAACGCAGCTT+GGG | - | chr8_4:2182851-2182870 | Msa1307030:intron | 35.0% |
| AAGCAAAGACCTACCAAAAA+AGG | - | chr8_4:2182952-2182971 | Msa1307030:intron | 35.0% | |
| ATGGAATAGCAAATGGACAT+TGG | - | chr8_4:2183062-2183081 | Msa1307030:intron | 35.0% | |
| AAAAAACCTTTGTCGTCCTT+AGG | + | chr8_4:2183190-2183209 | None:intergenic | 35.0% | |
| TATATTACAATCTTCCACGG+TGG | + | chr8_4:2183319-2183338 | None:intergenic | 35.0% | |
| GTGGTGCATCATAATATTTG+TGG | + | chr8_4:2183360-2183379 | None:intergenic | 35.0% | |
| ATGAGAAGAGAGATAAAGCT+GGG | + | chr8_4:2183411-2183430 | None:intergenic | 35.0% | |
| TGTACCATAACAGATTCTGT+AGG | - | chr8_4:2183452-2183471 | Msa1307030:intron | 35.0% | |
| ACTTCCTACAGAATCTGTTA+TGG | + | chr8_4:2183459-2183478 | None:intergenic | 35.0% | |
| ! | GTTAATTTGGTAGGAAAGGT+TGG | + | chr8_4:2183505-2183524 | None:intergenic | 35.0% |
| !! | TTTATTGGCGATGGATTTTG+GGG | - | chr8_4:2184096-2184115 | Msa1307030:intron | 35.0% |
| AGGACAAATACGAATGGAAT+TGG | - | chr8_4:2184119-2184138 | Msa1307030:intron | 35.0% | |
| !! | AGTTTTAGTGCTTGAAGGTT+GGG | - | chr8_4:2184177-2184196 | Msa1307030:intron | 35.0% |
| ! | CTGGTCTGTTTTGTGTTTTA+GGG | - | chr8_4:2184277-2184296 | Msa1307030:intron | 35.0% |
| !! | TGGTCTGTTTTGTGTTTTAG+GGG | - | chr8_4:2184278-2184297 | Msa1307030:intron | 35.0% |
| ! | AACTCACTGTTTTACATGAC+AGG | + | chr8_4:2184323-2184342 | None:intergenic | 35.0% |
| !! | AGCTGATTTCCTTTCCTTTT+AGG | - | chr8_4:2184368-2184387 | Msa1307030:intron | 35.0% |
| AAATTCGCGAATGAAGAAAC+TGG | + | chr8_4:2184485-2184504 | None:intergenic | 35.0% | |
| TTACAGTTGCATCCATGATA+AGG | + | chr8_4:2184618-2184637 | None:intergenic | 35.0% | |
| GAAATTCCCAGGTCTAATAA+TGG | - | chr8_4:2184681-2184700 | Msa1307030:intron | 35.0% | |
| ATGCAACCATTATTAGACCT+GGG | + | chr8_4:2184690-2184709 | None:intergenic | 35.0% | |
| AATGCAACCATTATTAGACC+TGG | + | chr8_4:2184691-2184710 | None:intergenic | 35.0% | |
| ! | GAAAATAATGATGTTGGTGG+TGG | + | chr8_4:2184718-2184737 | None:intergenic | 35.0% |
| ACCATTCGAGAAAGAATCAT+GGG | + | chr8_4:2184788-2184807 | None:intergenic | 35.0% | |
| TACCATTCGAGAAAGAATCA+TGG | + | chr8_4:2184789-2184808 | None:intergenic | 35.0% | |
| TCTTTCTCGAATGGTATCAA+CGG | - | chr8_4:2184793-2184812 | Msa1307030:intron | 35.0% | |
| !!! | GTTCGTAGTTTTTGAGATCT+TGG | - | chr8_4:2184815-2184834 | Msa1307030:intron | 35.0% |
| !!! | TTGGTTGTTTTTGGGTGAAT+CGG | - | chr8_4:2184834-2184853 | Msa1307030:intron | 35.0% |
| TATCTTAGAAGTTGTGATGG+TGG | - | chr8_4:2184977-2184996 | Msa1307030:CDS | 35.0% | |
| TAGATGGAGAGAAAGAGATA+CGG | - | chr8_4:2185017-2185036 | Msa1307030:CDS | 35.0% | |
| GGACACACCTAAAAGTAAAT+TGG | + | chr8_4:2185214-2185233 | None:intergenic | 35.0% | |
| !! | TTACTTTTAGGTGTGTCCTT+CGG | - | chr8_4:2185216-2185235 | Msa1307030:CDS | 35.0% |
| TTATTCGATCCAAAAACCGA+AGG | + | chr8_4:2185235-2185254 | None:intergenic | 35.0% | |
| ATGATGGTTCGTAATCACAT+TGG | - | chr8_4:2185534-2185553 | Msa1307030:CDS | 35.0% | |
| AATTGACAATGCACTCAATG+AGG | - | chr8_4:2185560-2185579 | Msa1307030:CDS | 35.0% | |
| ! | TTCTTCTCCTTTTCAGTTCC+AGG | + | chr8_4:2182344-2182363 | None:intergenic | 40.0% |
| GAAAAGGAGAAGAATAGGTC+TGG | - | chr8_4:2182350-2182369 | Msa1307030:CDS | 40.0% | |
| ! | GAATAGGTCTGGAACTGAAA+AGG | - | chr8_4:2182361-2182380 | Msa1307030:CDS | 40.0% |
| GAACTGAAAAGGAGAAGAAG+AGG | - | chr8_4:2182372-2182391 | Msa1307030:CDS | 40.0% | |
| GAAAAGGAGAAGAATAGGTC+TGG | - | chr8_4:2182350-2182369 | Msa1307030:CDS | 40.0% | |
| ! | GAATAGGTCTGGAACTGAAA+AGG | - | chr8_4:2182361-2182380 | Msa1307030:CDS | 40.0% |
| GAACTGAAAAGGAGAAGAAG+AGG | - | chr8_4:2182372-2182391 | Msa1307030:CDS | 40.0% | |
| GAAAAGGAGAAGAATAGGTC+TGG | - | chr8_4:2182350-2182369 | Msa1307030:CDS | 40.0% | |
| ! | GAATAGGTCTGGAACTGAAA+AGG | - | chr8_4:2182361-2182380 | Msa1307030:CDS | 40.0% |
| GAACTGAAAAGGAGAAGAAG+AGG | - | chr8_4:2182372-2182391 | Msa1307030:CDS | 40.0% | |
| GAAAAGGAGAAGAATAGGTC+TGG | - | chr8_4:2182350-2182369 | Msa1307030:CDS | 40.0% | |
| ! | GAATAGGTCTGGAACTGAAA+AGG | - | chr8_4:2182361-2182380 | Msa1307030:CDS | 40.0% |
| GAACTGAAAAGGAGAAGAAG+AGG | - | chr8_4:2182372-2182391 | Msa1307030:CDS | 40.0% | |
| GAAAAGGAGAAGAATAGGTC+TGG | - | chr8_4:2182350-2182369 | Msa1307030:CDS | 40.0% | |
| ! | GAATAGGTCTGGAACTGAAA+AGG | - | chr8_4:2182361-2182380 | Msa1307030:CDS | 40.0% |
| GAACTGAAAAGGAGAAGAAG+AGG | - | chr8_4:2182372-2182391 | Msa1307030:CDS | 40.0% | |
| GAAAAGGAGAAGAATAGGTC+TGG | - | chr8_4:2182350-2182369 | Msa1307030:CDS | 40.0% | |
| ! | GAATAGGTCTGGAACTGAAA+AGG | - | chr8_4:2182361-2182380 | Msa1307030:CDS | 40.0% |
| GAACTGAAAAGGAGAAGAAG+AGG | - | chr8_4:2182372-2182391 | Msa1307030:CDS | 40.0% | |
| GAAAAGGAGAAGAATAGGTC+TGG | - | chr8_4:2182350-2182369 | Msa1307030:CDS | 40.0% | |
| ! | GAATAGGTCTGGAACTGAAA+AGG | - | chr8_4:2182361-2182380 | Msa1307030:CDS | 40.0% |
| ! | ATAGGTCTGGAACTGAAAAG+GGG | - | chr8_4:2182363-2182382 | Msa1307030:CDS | 40.0% |
| GCAAAAAGAAACCCAAGCAA+TGG | + | chr8_4:2182812-2182831 | None:intergenic | 40.0% | |
| TTCCCTTTCCCTTTATTACC+AGG | - | chr8_4:2183260-2183279 | Msa1307030:intron | 40.0% | |
| AGCCTGGTAATAAAGGGAAA+GGG | + | chr8_4:2183265-2183284 | None:intergenic | 40.0% | |
| AGACTGAGCCTGGTAATAAA+GGG | + | chr8_4:2183271-2183290 | None:intergenic | 40.0% | |
| TAGACTGAGCCTGGTAATAA+AGG | + | chr8_4:2183272-2183291 | None:intergenic | 40.0% | |
| TTTATTACCAGGCTCAGTCT+AGG | - | chr8_4:2183271-2183290 | Msa1307030:intron | 40.0% | |
| TTATTACCAGGCTCAGTCTA+GGG | - | chr8_4:2183272-2183291 | Msa1307030:intron | 40.0% | |
| AAAGGAGATGTATAAGGCGT+TGG | + | chr8_4:2183382-2183401 | None:intergenic | 40.0% | |
| GATAAAGCTGGGATAGAGAA+AGG | + | chr8_4:2183400-2183419 | None:intergenic | 40.0% | |
| CATGAGAAGAGAGATAAAGC+TGG | + | chr8_4:2183412-2183431 | None:intergenic | 40.0% | |
| !! | AGGTTGGTGATTTGAAGGTA+GGG | + | chr8_4:2183489-2183508 | None:intergenic | 40.0% |
| !! | AAGGTTGGTGATTTGAAGGT+AGG | + | chr8_4:2183490-2183509 | None:intergenic | 40.0% |
| !! | AGGAAAGGTTGGTGATTTGA+AGG | + | chr8_4:2183494-2183513 | None:intergenic | 40.0% |
| AAGAACTTCTCACTGTCTGT+CGG | + | chr8_4:2183737-2183756 | None:intergenic | 40.0% | |
| GTGAGAAGTTCTTGAAACCA+AGG | - | chr8_4:2183744-2183763 | Msa1307030:intron | 40.0% | |
| !!! | TAGAATTGCATTTTGGGGTG+CGG | - | chr8_4:2183808-2183827 | Msa1307030:intron | 40.0% |
| TGTGTTTACTAGCCAAATGG+AGG | - | chr8_4:2183850-2183869 | Msa1307030:intron | 40.0% | |
| TCAAAAGACTACCGAGTTGT+TGG | - | chr8_4:2183938-2183957 | Msa1307030:intron | 40.0% | |
| TAAAGGGGTGAAAGAGATAG+TGG | - | chr8_4:2184058-2184077 | Msa1307030:intron | 40.0% | |
| !! | CAGTTTTAGTGCTTGAAGGT+TGG | - | chr8_4:2184176-2184195 | Msa1307030:intron | 40.0% |
| TCCAAAAACAATTGAGCCGA+AGG | + | chr8_4:2184210-2184229 | None:intergenic | 40.0% | |
| !! | GCTGGTCTGTTTTGTGTTTT+AGG | - | chr8_4:2184276-2184295 | Msa1307030:intron | 40.0% |
| !! | GGTCTGTTTTGTGTTTTAGG+GGG | - | chr8_4:2184279-2184298 | Msa1307030:intron | 40.0% |
| CTAACATCAAGACCCAAAAC+TGG | + | chr8_4:2184350-2184369 | None:intergenic | 40.0% | |
| !!! | TCGGTTGTTGTGGTGTTTTT+TGG | - | chr8_4:2184416-2184435 | Msa1307030:intron | 40.0% |
| !!! | CGGTTGTTGTGGTGTTTTTT+GGG | - | chr8_4:2184417-2184436 | Msa1307030:intron | 40.0% |
| !!! | AATTTTTAGTGCGCCTTGCA+CGG | - | chr8_4:2184500-2184519 | Msa1307030:intron | 40.0% |
| GGAATTTCACAAGGTTCTTC+TGG | + | chr8_4:2184669-2184688 | None:intergenic | 40.0% | |
| AAGAACCTTGTGAAATTCCC+AGG | - | chr8_4:2184670-2184689 | Msa1307030:intron | 40.0% | |
| TTAGACCTGGGAATTTCACA+AGG | + | chr8_4:2184678-2184697 | None:intergenic | 40.0% | |
| ACCCATGATTCTTTCTCGAA+TGG | - | chr8_4:2184784-2184803 | Msa1307030:intron | 40.0% | |
| GTGATTGAGAGGAAAAGGAA+AGG | - | chr8_4:2184870-2184889 | Msa1307030:intron | 40.0% | |
| AGAGATAAGGTCCATTTGAG+AGG | - | chr8_4:2184937-2184956 | Msa1307030:intron | 40.0% | |
| GGTAGAAGAGAGAGTTTAGA+TGG | - | chr8_4:2185001-2185020 | Msa1307030:CDS | 40.0% | |
| GTGAATTATCTGCAAGTGCT+TGG | + | chr8_4:2185057-2185076 | None:intergenic | 40.0% | |
| AGATAATTCACTCATCCACG+AGG | - | chr8_4:2185066-2185085 | Msa1307030:intron | 40.0% | |
| GATAATTCACTCATCCACGA+GGG | - | chr8_4:2185067-2185086 | Msa1307030:intron | 40.0% | |
| ! | TAATAAGGCACCTTCTAAGG+TGG | + | chr8_4:2185111-2185130 | None:intergenic | 40.0% |
| ! | TGGTAATAAGGCACCTTCTA+AGG | + | chr8_4:2185114-2185133 | None:intergenic | 40.0% |
| TTGAGACAGTGTTCTCTTGT+AGG | - | chr8_4:2185167-2185186 | Msa1307030:CDS | 40.0% | |
| TGAGACAGTGTTCTCTTGTA+GGG | - | chr8_4:2185168-2185187 | Msa1307030:CDS | 40.0% | |
| CAAACATCATCCAACTTGGT+GGG | + | chr8_4:2185429-2185448 | None:intergenic | 40.0% | |
| GAAAAGGAGAAGAAGAGGTC+TGG | - | chr8_4:2182377-2182396 | Msa1307030:CDS | 45.0% | |
| ! | GAAGAGGTCTGGAACTGAAA+AGG | - | chr8_4:2182388-2182407 | Msa1307030:CDS | 45.0% |
| GAAAAGGAGAAGAAGAGGTC+TGG | - | chr8_4:2182377-2182396 | Msa1307030:CDS | 45.0% | |
| ! | GAAGAGGTCTGGAACTGAAA+AGG | - | chr8_4:2182388-2182407 | Msa1307030:CDS | 45.0% |
| GAAAAGGAGAAGAAGAGGTC+TGG | - | chr8_4:2182377-2182396 | Msa1307030:CDS | 45.0% | |
| ! | GAAGAGGTCTGGAACTGAAA+AGG | - | chr8_4:2182388-2182407 | Msa1307030:CDS | 45.0% |
| GAAGAGGTCTGCAACTGAAA+AGG | - | chr8_4:2182550-2182569 | Msa1307030:intron | 45.0% | |
| GAAGAGGTCTGCAACTGAAA+AGG | - | chr8_4:2182550-2182569 | Msa1307030:intron | 45.0% | |
| GAAGAGGTCTGCAACTGAAA+AGG | - | chr8_4:2182550-2182569 | Msa1307030:intron | 45.0% | |
| GAACTGAAAAGGGGAAGAAG+AGG | - | chr8_4:2182696-2182715 | Msa1307030:intron | 45.0% | |
| TCACGCATCTCCCAAAAAGA+CGG | - | chr8_4:2182736-2182755 | Msa1307030:intron | 45.0% | |
| ! | TCGTCGTTGACCGTCTTTTT+GGG | + | chr8_4:2182749-2182768 | None:intergenic | 45.0% |
| ! | TTCGTCGTTGACCGTCTTTT+TGG | + | chr8_4:2182750-2182769 | None:intergenic | 45.0% |
| GAAATCGTCGTATGTGAGGT+CGG | - | chr8_4:2182767-2182786 | Msa1307030:intron | 45.0% | |
| AAACCCAAGCAATGGAGTTG+GGG | + | chr8_4:2182804-2182823 | None:intergenic | 45.0% | |
| GAAACCCAAGCAATGGAGTT+GGG | + | chr8_4:2182805-2182824 | None:intergenic | 45.0% | |
| AGAAACCCAAGCAATGGAGT+TGG | + | chr8_4:2182806-2182825 | None:intergenic | 45.0% | |
| GGAAGGTTTCTGTGAAGCAT+TGG | - | chr8_4:2182881-2182900 | Msa1307030:intron | 45.0% | |
| !! | TCTGTGAAGCATTGGAACGA+AGG | - | chr8_4:2182889-2182908 | Msa1307030:intron | 45.0% |
| !! | CTGTGAAGCATTGGAACGAA+GGG | - | chr8_4:2182890-2182909 | Msa1307030:intron | 45.0% |
| ! | AGCATTGGAACGAAGGGATT+CGG | - | chr8_4:2182896-2182915 | Msa1307030:intron | 45.0% |
| CAAAAGCCTAAGGACGACAA+AGG | - | chr8_4:2183181-2183200 | Msa1307030:intron | 45.0% | |
| GAGCCTGGTAATAAAGGGAA+AGG | + | chr8_4:2183266-2183285 | None:intergenic | 45.0% | |
| !! | GGTTGGTGATTTGAAGGTAG+GGG | + | chr8_4:2183488-2183507 | None:intergenic | 45.0% |
| !!! | AGAATTGCATTTTGGGGTGC+GGG | - | chr8_4:2183809-2183828 | Msa1307030:intron | 45.0% |
| GTTTACTAGCCAAATGGAGG+CGG | - | chr8_4:2183853-2183872 | Msa1307030:intron | 45.0% | |
| TTTACTAGCCAAATGGAGGC+GGG | - | chr8_4:2183854-2183873 | Msa1307030:intron | 45.0% | |
| ! | ACGCGGCGATTTGGAAAATT+TGG | - | chr8_4:2184000-2184019 | Msa1307030:intron | 45.0% |
| TTGGGGAGGACAAATACGAA+TGG | - | chr8_4:2184113-2184132 | Msa1307030:intron | 45.0% | |
| CGAATGGAATTGGAACCTGA+TGG | - | chr8_4:2184129-2184148 | Msa1307030:intron | 45.0% | |
| ! | ATGGAATGCTTGTTGCGCTA+AGG | - | chr8_4:2184148-2184167 | Msa1307030:intron | 45.0% |
| ! | TGGAATGCTTGTTGCGCTAA+GGG | - | chr8_4:2184149-2184168 | Msa1307030:intron | 45.0% |
| !! | TGGGCAGTTTTAGTGCTTGA+AGG | - | chr8_4:2184172-2184191 | Msa1307030:intron | 45.0% |
| ! | GCCTTCGGCTCAATTGTTTT+TGG | - | chr8_4:2184206-2184225 | Msa1307030:intron | 45.0% |
| !!! | TTGCGGTGCTGCCATATTTT+CGG | - | chr8_4:2184234-2184253 | Msa1307030:intron | 45.0% |
| CTGTGCACAGTCCGAAAATA+TGG | + | chr8_4:2184248-2184267 | None:intergenic | 45.0% | |
| ! | CATATTTTCGGACTGTGCAC+AGG | - | chr8_4:2184246-2184265 | Msa1307030:intron | 45.0% |
| ! | AGTGAGTTGCTGCCAGTTTT+GGG | - | chr8_4:2184335-2184354 | Msa1307030:intron | 45.0% |
| CAGCAGCTACCTAAAAGGAA+AGG | + | chr8_4:2184380-2184399 | None:intergenic | 45.0% | |
| TATTAACGACGAACCGTGCA+AGG | + | chr8_4:2184516-2184535 | None:intergenic | 45.0% | |
| TCACAAGGTTCTTCTGGTCA+TGG | + | chr8_4:2184663-2184682 | None:intergenic | 45.0% | |
| !! | CTTAGAAGTTGTGATGGTGG+AGG | - | chr8_4:2184980-2184999 | Msa1307030:CDS | 45.0% |
| ATCTGCAAGTGCTTGGTATG+CGG | + | chr8_4:2185050-2185069 | None:intergenic | 45.0% | |
| GTAACTCATATCATCCCTCG+TGG | + | chr8_4:2185084-2185103 | None:intergenic | 45.0% | |
| AGTTACCCATCCACCTTAGA+AGG | - | chr8_4:2185098-2185117 | Msa1307030:intron | 45.0% | |
| ! | TAGGTGTGTCCTTCGGTTTT+TGG | - | chr8_4:2185223-2185242 | Msa1307030:CDS | 45.0% |
| ! | ATCATCCAACTTGGTGGGAA+GGG | + | chr8_4:2185424-2185443 | None:intergenic | 45.0% |
| CCAAACATCATCCAACTTGG+TGG | + | chr8_4:2185430-2185449 | None:intergenic | 45.0% | |
| ! | CCACCAAGTTGGATGATGTT+TGG | - | chr8_4:2185427-2185446 | Msa1307030:CDS | 45.0% |
| CCACCAAACATCATCCAACT+TGG | + | chr8_4:2185433-2185452 | None:intergenic | 45.0% | |
| ! | CCAAGTTGGATGATGTTTGG+TGG | - | chr8_4:2185430-2185449 | Msa1307030:CDS | 45.0% |
| ! | AGTTGGATGATGTTTGGTGG+TGG | - | chr8_4:2185433-2185452 | Msa1307030:CDS | 45.0% |
| AGGAACCTCATTGACCATGT+CGG | - | chr8_4:2185506-2185525 | Msa1307030:CDS | 45.0% | |
| AACCATCATCAACTCCGACA+TGG | + | chr8_4:2185523-2185542 | None:intergenic | 45.0% | |
| CGACGAAATCGTCGTATGTG+AGG | - | chr8_4:2182763-2182782 | Msa1307030:intron | 50.0% | |
| ! | CAATGGAGTTGGGGGTTTTG+AGG | + | chr8_4:2182795-2182814 | None:intergenic | 50.0% |
| AAACCCCCAACTCCATTGCT+TGG | - | chr8_4:2182797-2182816 | Msa1307030:intron | 50.0% | |
| AACCCCCAACTCCATTGCTT+GGG | - | chr8_4:2182798-2182817 | Msa1307030:intron | 50.0% | |
| AACCCAAGCAATGGAGTTGG+GGG | + | chr8_4:2182803-2182822 | None:intergenic | 50.0% | |
| TAACGCAGCTTGGGACAAAG+AGG | - | chr8_4:2182860-2182879 | Msa1307030:intron | 50.0% | |
| CTAGGGTGGATGAGCTTGAT+AGG | - | chr8_4:2183289-2183308 | Msa1307030:intron | 50.0% | |
| !! | GGAGATGTATAAGGCGTTGG+TGG | + | chr8_4:2183379-2183398 | None:intergenic | 50.0% |
| TTACTAGCCAAATGGAGGCG+GGG | - | chr8_4:2183855-2183874 | Msa1307030:intron | 50.0% | |
| TGGAAGGGGATAACGCTCTT+TGG | - | chr8_4:2183884-2183903 | Msa1307030:intron | 50.0% | |
| AGGGGATAACGCTCTTTGGA+TGG | - | chr8_4:2183888-2183907 | Msa1307030:intron | 50.0% | |
| GGATAACGCTCTTTGGATGG+AGG | - | chr8_4:2183891-2183910 | Msa1307030:intron | 50.0% | |
| !! | TCTTTGGATGGAGGTGTTGG+TGG | - | chr8_4:2183900-2183919 | Msa1307030:intron | 50.0% |
| AGACTACCGAGTTGTTGGTG+AGG | - | chr8_4:2183943-2183962 | Msa1307030:intron | 50.0% | |
| ! | GACTACCGAGTTGTTGGTGA+GGG | - | chr8_4:2183944-2183963 | Msa1307030:intron | 50.0% |
| ! | ACTACCGAGTTGTTGGTGAG+GGG | - | chr8_4:2183945-2183964 | Msa1307030:intron | 50.0% |
| ACTACCCCTCACCAACAACT+CGG | + | chr8_4:2183952-2183971 | None:intergenic | 50.0% | |
| ! | TGTTGGTGAGGGGTAGTACT+TGG | - | chr8_4:2183955-2183974 | Msa1307030:intron | 50.0% |
| TGCCAAATCAACCTCAAGCG+CGG | + | chr8_4:2183981-2184000 | None:intergenic | 50.0% | |
| !! | CTTGAGGTTGATTTGGCACG+CGG | - | chr8_4:2183983-2184002 | Msa1307030:intron | 50.0% |
| ! | AGGGGTGAAAGAGATAGTGG+AGG | - | chr8_4:2184061-2184080 | Msa1307030:intron | 50.0% |
| !! | ATTGGCGATGGATTTTGGGG+AGG | - | chr8_4:2184099-2184118 | Msa1307030:intron | 50.0% |
| AGCGCAACAAGCATTCCATC+AGG | + | chr8_4:2184147-2184166 | None:intergenic | 50.0% | |
| ! | AATGCTTGTTGCGCTAAGGG+TGG | - | chr8_4:2184152-2184171 | Msa1307030:intron | 50.0% |
| ! | ATGCTTGTTGCGCTAAGGGT+GGG | - | chr8_4:2184153-2184172 | Msa1307030:intron | 50.0% |
| CATGACAGGAGAATCGCAAC+AGG | + | chr8_4:2184309-2184328 | None:intergenic | 50.0% | |
| ! | CAGTGAGTTGCTGCCAGTTT+TGG | - | chr8_4:2184334-2184353 | Msa1307030:intron | 50.0% |
| ACTGGCAGCAGCTACCTAAA+AGG | + | chr8_4:2184385-2184404 | None:intergenic | 50.0% | |
| ! | TAGGTAGCTGCTGCCAGTTT+TGG | - | chr8_4:2184387-2184406 | Msa1307030:intron | 50.0% |
| ! | AGGTAGCTGCTGCCAGTTTT+GGG | - | chr8_4:2184388-2184407 | Msa1307030:intron | 50.0% |
| !!! | CTGCCAGTTTTGGGTGCTAT+CGG | - | chr8_4:2184397-2184416 | Msa1307030:intron | 50.0% |
| CAACCGATAGCACCCAAAAC+TGG | + | chr8_4:2184403-2184422 | None:intergenic | 50.0% | |
| ! | TTGGGTGCTATCGGTTGTTG+TGG | - | chr8_4:2184406-2184425 | Msa1307030:intron | 50.0% |
| AGGTTCTTCTGGTCATGGCT+TGG | + | chr8_4:2184658-2184677 | None:intergenic | 50.0% | |
| !! | AGGCACCTTCTAAGGTGGAT+GGG | + | chr8_4:2185106-2185125 | None:intergenic | 50.0% |
| !! | AAGGCACCTTCTAAGGTGGA+TGG | + | chr8_4:2185107-2185126 | None:intergenic | 50.0% |
| TCATTCCCTTCCCACCAAGT+TGG | - | chr8_4:2185416-2185435 | Msa1307030:CDS | 50.0% | |
| ! | CATCATCCAACTTGGTGGGA+AGG | + | chr8_4:2185425-2185444 | None:intergenic | 50.0% |
| CAACTCCGACATGGTCAATG+AGG | + | chr8_4:2185514-2185533 | None:intergenic | 50.0% | |
| !! | GACCATGTCGGAGTTGATGA+TGG | - | chr8_4:2185518-2185537 | Msa1307030:CDS | 50.0% |
| GCAGCTTGGGACAAAGAGGA+AGG | - | chr8_4:2182864-2182883 | Msa1307030:intron | 55.0% | |
| TTACCAGGCTCAGTCTAGGG+TGG | - | chr8_4:2183275-2183294 | Msa1307030:intron | 55.0% | |
| GCTTGATAGGTCTTCCACCG+TGG | - | chr8_4:2183302-2183321 | Msa1307030:intron | 55.0% | |
| TACTAGCCAAATGGAGGCGG+GGG | - | chr8_4:2183856-2183875 | Msa1307030:intron | 55.0% | |
| ! | CGCTCTTTGGATGGAGGTGT+TGG | - | chr8_4:2183897-2183916 | Msa1307030:intron | 55.0% |
| ! | TGATTTGGCACGCGGCGATT+TGG | - | chr8_4:2183991-2184010 | Msa1307030:intron | 55.0% |
| AAGGTTGGGCATGCTGCCTT+CGG | - | chr8_4:2184191-2184210 | Msa1307030:intron | 55.0% | |
| CATCCACCCTAGACTGAGCC+TGG | + | chr8_4:2183281-2183300 | None:intergenic | 60.0% | |
| TGGGGTGCGGGATGTCAAAG+TGG | - | chr8_4:2183821-2183840 | Msa1307030:intron | 60.0% | |
| ACTAGCCAAATGGAGGCGGG+GGG | - | chr8_4:2183857-2183876 | Msa1307030:intron | 60.0% | |
| GTAGTACTTGGCCGCGCTTG+AGG | - | chr8_4:2183967-2183986 | Msa1307030:intron | 60.0% | |
| ! | GGCCGCGCTTGAGGTTGATT+TGG | - | chr8_4:2183976-2183995 | Msa1307030:intron | 60.0% |
| CTGTGCACAGGTTCTGCTGC+TGG | - | chr8_4:2184258-2184277 | Msa1307030:intron | 60.0% | |
| ACCAACCCCCCGCCTCCATT+TGG | + | chr8_4:2183865-2183884 | None:intergenic | 65.0% | |
| AAATGGAGGCGGGGGGTTGG+TGG | - | chr8_4:2183864-2183883 | Msa1307030:intron | 65.0% | |
| GCCAAATGGAGGCGGGGGGT+TGG | - | chr8_4:2183861-2183880 | Msa1307030:intron | 70.0% | |
| !! | GAGGCGGGGGGTTGGTGGAA+GGG | - | chr8_4:2183869-2183888 | Msa1307030:intron | 70.0% |
| !! | AGGCGGGGGGTTGGTGGAAG+GGG | - | chr8_4:2183870-2183889 | Msa1307030:intron | 70.0% |
| !! | GGAGGCGGGGGGTTGGTGGA+AGG | - | chr8_4:2183868-2183887 | Msa1307030:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 2182338 | 2185590 | 2182338 | ID=Msa1307030;Name=Msa1307030 |
| chr8_4 | mRNA | 2182338 | 2185590 | 2182338 | ID=Msa1307030-mRNA-1;Parent=Msa1307030;Name=Msa1307030-mRNA-1;_AED=0.41;_eAED=0.41;_QI=0|0|0|0.5|0.33|0.5|4|0|199 |
| chr8_4 | exon | 2185373 | 2185590 | 2185373 | ID=Msa1307030-mRNA-1:exon:711;Parent=Msa1307030-mRNA-1 |
| chr8_4 | exon | 2185153 | 2185345 | 2185153 | ID=Msa1307030-mRNA-1:exon:710;Parent=Msa1307030-mRNA-1 |
| chr8_4 | exon | 2184955 | 2185060 | 2184955 | ID=Msa1307030-mRNA-1:exon:709;Parent=Msa1307030-mRNA-1 |
| chr8_4 | exon | 2182338 | 2182420 | 2182338 | ID=Msa1307030-mRNA-1:exon:708;Parent=Msa1307030-mRNA-1 |
| chr8_4 | CDS | 2185373 | 2185590 | 2185373 | ID=Msa1307030-mRNA-1:cds;Parent=Msa1307030-mRNA-1 |
| chr8_4 | CDS | 2185153 | 2185345 | 2185153 | ID=Msa1307030-mRNA-1:cds;Parent=Msa1307030-mRNA-1 |
| chr8_4 | CDS | 2184955 | 2185060 | 2184955 | ID=Msa1307030-mRNA-1:cds;Parent=Msa1307030-mRNA-1 |
| chr8_4 | CDS | 2182338 | 2182420 | 2182338 | ID=Msa1307030-mRNA-1:cds;Parent=Msa1307030-mRNA-1 |
| Gene Sequence |
| Protein sequence |
