Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1362670 | XP_004502968.1 | 51.402 | 107 | 35 | 3 | 74 | 163 | 2 | 108 | 1.83e-22 | 96.7 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1362670 | sp|O65154|KIWI_ARATH | 41.379 | 87 | 40 | 2 | 86 | 161 | 19 | 105 | 1.11e-13 | 66.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1362670 | A0A1S2YDV6 | 51.402 | 107 | 35 | 3 | 74 | 163 | 2 | 108 | 8.72e-23 | 96.7 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0064970 | Msa1362670 | 0.800202 | 1.609980e-48 | -8.615850e-47 |
| Msa0109900 | Msa1362670 | 0.809187 | 2.141835e-50 | -8.615850e-47 |
| Msa0117710 | Msa1362670 | 0.841282 | 5.221705e-58 | -8.615850e-47 |
| Msa1362670 | Msa1372760 | 0.806545 | 7.809352e-50 | -8.615850e-47 |
| Msa1362670 | Msa1385000 | 0.821628 | 3.648892e-53 | -8.615850e-47 |
| Msa1362670 | Msa1391280 | 0.867981 | 9.161425e-66 | -8.615850e-47 |
| Msa1362670 | Msa1403480 | 0.804251 | 2.363196e-49 | -8.615850e-47 |
| Msa1362670 | Msa1411020 | 0.815148 | 1.072519e-51 | -8.615850e-47 |
| Msa1362670 | Msa1420290 | 0.815260 | 1.012506e-51 | -8.615850e-47 |
| Msa1362670 | Msa1420490 | 0.808011 | 3.819294e-50 | -8.615850e-47 |
| Msa1362670 | Msa1423390 | 0.805542 | 1.269478e-49 | -8.615850e-47 |
| Msa1362670 | Msa1424290 | 0.817396 | 3.369385e-52 | -8.615850e-47 |
| Msa1362670 | Msa1434350 | 0.814365 | 1.599054e-51 | -8.615850e-47 |
| Msa1362670 | Msa1439320 | 0.811483 | 6.846733e-51 | -8.615850e-47 |
| Msa1362670 | Msa1440370 | 0.809934 | 1.479946e-50 | -8.615850e-47 |
| Msa1362670 | Msa1440810 | 0.811719 | 6.082286e-51 | -8.615850e-47 |
| Msa1362670 | Msa1460050 | 0.808399 | 3.156846e-50 | -8.615850e-47 |
| Msa1362670 | Msa1466540 | 0.806561 | 7.750417e-50 | -8.615850e-47 |
| Msa0657970 | Msa1362670 | 0.829717 | 4.401885e-55 | -8.615850e-47 |
| Msa0681250 | Msa1362670 | 0.800706 | 1.271041e-48 | -8.615850e-47 |
| Msa0681270 | Msa1362670 | 0.810248 | 1.266679e-50 | -8.615850e-47 |
| Msa0693380 | Msa1362670 | 0.807359 | 5.253494e-50 | -8.615850e-47 |
| Msa0717890 | Msa1362670 | 0.803505 | 3.377025e-49 | -8.615850e-47 |
| Msa0726040 | Msa1362670 | 0.816041 | 6.785144e-52 | -8.615850e-47 |
| Msa0766630 | Msa1362670 | 0.819740 | 9.907168e-53 | -8.615850e-47 |
| Msa0775190 | Msa1362670 | 0.807242 | 5.562743e-50 | -8.615850e-47 |
| Msa0816710 | Msa1362670 | 0.800885 | 1.168294e-48 | -8.615850e-47 |
| Msa0824660 | Msa1362670 | 0.805169 | 1.520096e-49 | -8.615850e-47 |
| Msa0828850 | Msa1362670 | 0.811369 | 7.247755e-51 | -8.615850e-47 |
| Msa0218240 | Msa1362670 | 0.811004 | 8.697030e-51 | -8.615850e-47 |
| Msa1250290 | Msa1362670 | 0.809922 | 1.489252e-50 | -8.615850e-47 |
| Msa1284680 | Msa1362670 | 0.805290 | 1.433839e-49 | -8.615850e-47 |
| Msa1297290 | Msa1362670 | 0.821007 | 5.074785e-53 | -8.615850e-47 |
| Msa1307030 | Msa1362670 | 0.905508 | 3.987534e-80 | -8.615850e-47 |
| Msa1331000 | Msa1362670 | 0.801228 | 9.941046e-49 | -8.615850e-47 |
| Msa0373450 | Msa1362670 | 0.800916 | 1.151596e-48 | -8.615850e-47 |
| Msa0402290 | Msa1362670 | 0.801445 | 8.974851e-49 | -8.615850e-47 |
| Msa0455760 | Msa1362670 | 0.812728 | 3.662971e-51 | -8.615850e-47 |
| Msa0471670 | Msa1362670 | 0.810986 | 8.775706e-51 | -8.615850e-47 |
| Msa1004840 | Msa1362670 | 0.803606 | 3.217746e-49 | -8.615850e-47 |
| Msa1014540 | Msa1362670 | 0.805126 | 1.551582e-49 | -8.615850e-47 |
| Msa1075650 | Msa1362670 | 0.839140 | 1.893421e-57 | -8.615850e-47 |
| Msa1081330 | Msa1362670 | 0.808623 | 2.827938e-50 | -8.615850e-47 |
| Msa1082500 | Msa1362670 | 0.841098 | 5.837011e-58 | -8.615850e-47 |
| Msa0260780 | Msa1362670 | 0.800147 | 1.652077e-48 | -8.615850e-47 |
| Msa0281930 | Msa1362670 | 0.804023 | 2.635856e-49 | -8.615850e-47 |
| Msa0331000 | Msa1362670 | 0.802712 | 4.924564e-49 | -8.615850e-47 |
| Msa1116260 | Msa1362670 | 0.800853 | 1.185845e-48 | -8.615850e-47 |
| Msa1117170 | Msa1362670 | 0.845475 | 3.968501e-59 | -8.615850e-47 |
| Msa1205370 | Msa1362670 | 0.814785 | 1.290846e-51 | -8.615850e-47 |
| Msa0484780 | Msa1362670 | 0.840103 | 1.063771e-57 | -8.615850e-47 |
| Msa0502890 | Msa1362670 | 0.813938 | 1.986188e-51 | -8.615850e-47 |
| Msa0503060 | Msa1362670 | 0.816065 | 6.701820e-52 | -8.615850e-47 |
| Msa0512900 | Msa1362670 | 0.821317 | 4.305209e-53 | -8.615850e-47 |
| Msa0520700 | Msa1362670 | 0.802353 | 5.842094e-49 | -8.615850e-47 |
| Msa0531180 | Msa1362670 | 0.812742 | 3.637378e-51 | -8.615850e-47 |
| Msa0532350 | Msa1362670 | 0.808138 | 3.587633e-50 | -8.615850e-47 |
| Msa0901930 | Msa1362670 | 0.813414 | 2.591305e-51 | -8.615850e-47 |
| Msa0909120 | Msa1362670 | 0.807201 | 5.675260e-50 | -8.615850e-47 |
| Msa0954920 | Msa1362670 | 0.803269 | 3.777765e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1362670 | MtrunA17_Chr3g0130571 | 49.074 | 108 | 39 | 3 | 72 | 163 | 34 | 141 | 1.45e-23 | 90.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1362670 | AT5G09250.1 | 41.379 | 87 | 40 | 2 | 86 | 161 | 19 | 105 | 1.13e-14 | 66.6 |
| Msa1362670 | AT5G09250.3 | 50.000 | 58 | 29 | 0 | 106 | 163 | 53 | 110 | 3.06e-12 | 60.5 |
| Msa1362670 | AT5G09250.4 | 41.667 | 72 | 31 | 2 | 86 | 146 | 19 | 90 | 5.13e-11 | 57.4 |
Find 41 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCACTCAATGAGGACTCTT+AGG | 0.366094 | tig0017897:+172158 | Msa1362670:CDS |
| CGCGAATATTACTTAAAAGA+TGG | 0.404513 | tig0017897:+169517 | Msa1362670:CDS |
| AGCATTGGAACGAAGGGATT+CGG | 0.424874 | tig0017897:+169485 | Msa1362670:CDS |
| AATAGGTCTGGAACTGAAAA+GGG | 0.449012 | tig0017897:+169275 | Msa1362670:intron |
| GAAAAGGAGAAGAAGAGGTC+TGG | 0.454761 | tig0017897:+169074 | Msa1362670:CDS |
| GAAGAGGTCTGCAACTGAAA+AGG | 0.458649 | tig0017897:+169139 | Msa1362670:CDS |
| GAAGAGGTCTGCAACTGAAA+AGG | 0.458649 | tig0017897:+169193 | Msa1362670:CDS |
| CAACTGAAAAGGAGAAGAAT+AGG | 0.461723 | tig0017897:+169150 | Msa1362670:CDS |
| CAACTGAAAAGGAGAAGAAT+AGG | 0.461723 | tig0017897:+169204 | Msa1362670:CDS |
| GAATAGGTCTGGAACTGAAA+AGG | 0.466779 | tig0017897:+169274 | Msa1362670:intron |
| GAACTGAAAAGGAGAAGAAT+AGG | 0.468877 | tig0017897:+169042 | Msa1362670:CDS |
| GAACTGAAAAGGAGAAGAAT+AGG | 0.468877 | tig0017897:+169096 | Msa1362670:CDS |
| AGAAATGCCTGGAACTGAAA+AGG | 0.469309 | tig0017897:+169031 | None:intergenic |
| GAATAGGTCTGGAACTGAAA+AGG | 0.472159 | tig0017897:+169058 | Msa1362670:CDS |
| GAATAGGTCTGGAACTGAAA+AGG | 0.472159 | tig0017897:+169112 | Msa1362670:CDS |
| GAATAGGTCTGGAACTGAAA+AGG | 0.472159 | tig0017897:+169166 | Msa1362670:CDS |
| GAATAGGTCTGGAACTGAAA+AGG | 0.472159 | tig0017897:+169220 | Msa1362670:CDS |
| GAAAAGGAGAAGAATAGGTC+TGG | 0.477457 | tig0017897:+169047 | Msa1362670:CDS |
| GAAAAGGAGAAGAATAGGTC+TGG | 0.477457 | tig0017897:+169101 | Msa1362670:CDS |
| GAAAAGGAGAAGAATAGGTC+TGG | 0.477457 | tig0017897:+169155 | Msa1362670:CDS |
| GAAAAGGAGAAGAATAGGTC+TGG | 0.477457 | tig0017897:+169209 | Msa1362670:CDS |
| GGAAGGTTTCTGTGAAGCAT+TGG | 0.486433 | tig0017897:+169470 | Msa1362670:CDS |
| AAGCAAAGACCTACCACAAA+AGG | 0.490530 | tig0017897:+169541 | Msa1362670:CDS |
| GAAGAGGTCTGGAACTGAAA+AGG | 0.498166 | tig0017897:+169085 | Msa1362670:CDS |
| AATCTTTATAGAGAAATGCC+TGG | 0.524021 | tig0017897:+169020 | None:intergenic |
| CTGTGAAGCATTGGAACGAA+GGG | 0.525495 | tig0017897:+169479 | Msa1362670:CDS |
| GACCATGTCGGAGTTGATGA+TGG | 0.532598 | tig0017897:+172107 | Msa1362670:CDS |
| GAACTGAAAAGGAGAAGAAG+AGG | 0.574608 | tig0017897:+169069 | Msa1362670:CDS |
| GAACTGAAAAGGAGAAGAAG+AGG | 0.574608 | tig0017897:+169123 | Msa1362670:CDS |
| GAACTGAAAAGGAGAAGAAG+AGG | 0.574608 | tig0017897:+169177 | Msa1362670:CDS |
| GAACTGAAAAGGAGAAGAAG+AGG | 0.574608 | tig0017897:+169231 | Msa1362670:CDS |
| GAACTGAAAAGGGGAAGAAG+AGG | 0.586147 | tig0017897:+169285 | Msa1362670:CDS |
| TCTGTGAAGCATTGGAACGA+AGG | 0.589293 | tig0017897:+169478 | Msa1362670:CDS |
| CAACTCCGACATGGTCAATG+AGG | 0.600146 | tig0017897:-172100 | None:intergenic |
| ATGATGGTTCGTAATCACAT+TGG | 0.601069 | tig0017897:+172123 | Msa1362670:CDS |
| GCAGCTTGGGACAAAGAGGA+AGG | 0.602778 | tig0017897:+169453 | Msa1362670:intron |
| TAACGCAGCTTGGGACAAAG+AGG | 0.608874 | tig0017897:+169449 | Msa1362670:intron |
| AATTGACAATGCACTCAATG+AGG | 0.616344 | tig0017897:+172149 | Msa1362670:CDS |
| AACCATCATCAACTCCGACA+TGG | 0.642168 | tig0017897:-172109 | None:intergenic |
| AGGAACCTCATTGACCATGT+CGG | 0.644511 | tig0017897:+172095 | Msa1362670:intron |
| ATAGGTCTGGAACTGAAAAG+GGG | 0.667488 | tig0017897:+169276 | Msa1362670:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTAATAATACAACTAA+AGG | + | tig0017897:170630-170649 | Msa1362670:intron | 10.0% |
| !!! | TTTTTAATAATACAACTAAA+GGG | + | tig0017897:170631-170650 | Msa1362670:intron | 10.0% |
| !! | TTTATGAAATGTTGTTATAA+TGG | + | tig0017897:169585-169604 | Msa1362670:intron | 15.0% |
| !! | TTATGAAATGTTGTTATAAT+GGG | + | tig0017897:169586-169605 | Msa1362670:intron | 15.0% |
| !! | AATCACTTTATATAAAGATA+AGG | - | tig0017897:169618-169637 | None:intergenic | 15.0% |
| !! | AAATTTCCATAAAATTGAAT+TGG | - | tig0017897:169711-169730 | None:intergenic | 15.0% |
| !!! | ATTCAATTTTATGGAAATTT+TGG | + | tig0017897:169711-169730 | Msa1362670:intron | 15.0% |
| !!! | TTTTAATAATACAACTAAAG+GGG | + | tig0017897:170632-170651 | Msa1362670:intron | 15.0% |
| !! | AGTAATTGTAATCTTAATTT+CGG | - | tig0017897:171183-171202 | None:intergenic | 15.0% |
| !! | TTTAAAGAAAATAATGATGT+TGG | - | tig0017897:171313-171332 | None:intergenic | 15.0% |
| !!! | ATTTATTAAGTTTTTGTTCT+TGG | + | tig0017897:171951-171970 | Msa1362670:intron | 15.0% |
| !! | CAAAATTGATAAACAAAATC+AGG | - | tig0017897:169678-169697 | None:intergenic | 20.0% |
| !!! | GACAAAGGTTTTTTAAAAAA+AGG | + | tig0017897:169785-169804 | Msa1362670:intron | 20.0% |
| !!! | AAATGTGAGATTTGTTAATT+TGG | - | tig0017897:170107-170126 | None:intergenic | 20.0% |
| !!! | TGGTTTCTAGTTATTTTTTT+CGG | - | tig0017897:170141-170160 | None:intergenic | 20.0% |
| !!! | TGAATGTTGGATTTTTATTT+GGG | - | tig0017897:170213-170232 | None:intergenic | 20.0% |
| !!! | TTGAATGTTGGATTTTTATT+TGG | - | tig0017897:170214-170233 | None:intergenic | 20.0% |
| !!! | TTATATGTAGAATTGCATTT+TGG | + | tig0017897:170390-170409 | Msa1362670:intron | 20.0% |
| !!! | TATATGTAGAATTGCATTTT+GGG | + | tig0017897:170391-170410 | Msa1362670:intron | 20.0% |
| !!! | TTTAGAATGAATCAATGAAA+CGG | - | tig0017897:171506-171525 | None:intergenic | 20.0% |
| !! | ATGAATTGAAATACCTTTTG+TGG | - | tig0017897:169557-169576 | None:intergenic | 25.0% |
| ! | GTGATTGATGAAATGTTTAA+TGG | + | tig0017897:169632-169651 | Msa1362670:intron | 25.0% |
| ! | ATGTTTAATGGAATAGCAAA+TGG | + | tig0017897:169644-169663 | Msa1362670:intron | 25.0% |
| !! | TTGTCACCAATTCAATTTTA+TGG | + | tig0017897:169702-169721 | Msa1362670:intron | 25.0% |
| ! | CTGTTATGGTACATTATTAT+GGG | - | tig0017897:170034-170053 | None:intergenic | 25.0% |
| ! | TCTGTTATGGTACATTATTA+TGG | - | tig0017897:170035-170054 | None:intergenic | 25.0% |
| !! | ATTTGTTAATTTGGTAGGAA+AGG | - | tig0017897:170098-170117 | None:intergenic | 25.0% |
| !!! | TTAAAGTGCTTGTTGTTATT+TGG | - | tig0017897:170161-170180 | None:intergenic | 25.0% |
| ! | AAATAACAACAAGCACTTTA+AGG | + | tig0017897:170160-170179 | Msa1362670:intron | 25.0% |
| !!! | GAATGTTGGATTTTTATTTG+GGG | - | tig0017897:170212-170231 | None:intergenic | 25.0% |
| !! | GACAGTGAAATTTGTTTATA+TGG | + | tig0017897:170235-170254 | Msa1362670:intron | 25.0% |
| !! | CTTAGTAATATCTAGAACTT+TGG | + | tig0017897:170259-170278 | Msa1362670:intron | 25.0% |
| !! | ATATGTAGAATTGCATTTTG+GGG | + | tig0017897:170392-170411 | Msa1362670:intron | 25.0% |
| ! | AGGAAGTGAAAGTTATTTAT+TGG | + | tig0017897:170670-170689 | Msa1362670:intron | 25.0% |
| ! | TTACAATTACTTCCTTATCA+TGG | + | tig0017897:171192-171211 | Msa1362670:intron | 25.0% |
| ! | AAAGAAAATAATGATGTTGG+TGG | - | tig0017897:171310-171329 | None:intergenic | 25.0% |
| !! | GATTCATTCTAAAAGAGATA+AGG | + | tig0017897:171513-171532 | Msa1362670:intron | 25.0% |
| !! | ACAATTAAGGATTGGTAATA+AGG | - | tig0017897:171715-171734 | None:intergenic | 25.0% |
| !!! | TTTTGACCCAATTTACTTTT+AGG | + | tig0017897:171793-171812 | Msa1362670:intron | 25.0% |
| ! | ACATTTGTATACTTTCTTTC+AGG | + | tig0017897:172075-172094 | Msa1362670:intron | 25.0% |
| CGCGAATATTACTTAAAAGA+TGG | + | tig0017897:169517-169536 | Msa1362670:CDS | 30.0% | |
| ! | ATTGAAATACCTTTTGTGGT+AGG | - | tig0017897:169553-169572 | None:intergenic | 30.0% |
| TGATGAAATTCAAAAGCCTA+AGG | + | tig0017897:169760-169779 | Msa1362670:intron | 30.0% | |
| TCGTATATTACAATCTTCCA+CGG | - | tig0017897:169911-169930 | None:intergenic | 30.0% | |
| ATAGAGAAAGGAGATGTATA+AGG | - | tig0017897:169977-169996 | None:intergenic | 30.0% | |
| !! | GTGAGATTTGTTAATTTGGT+AGG | - | tig0017897:170103-170122 | None:intergenic | 30.0% |
| ATTTCACTGTCATTGAATGT+TGG | - | tig0017897:170226-170245 | None:intergenic | 30.0% | |
| AATGCAATTCTTAGAATCCT+TGG | - | tig0017897:170353-170372 | None:intergenic | 30.0% | |
| ATTTGTGTTTACTAGCCAAA+TGG | + | tig0017897:170436-170455 | Msa1362670:intron | 30.0% | |
| ! | GTTGGTGGAGAAATATAATA+CGG | + | tig0017897:170504-170523 | Msa1362670:intron | 30.0% |
| TGAAAGTTATTTATTGGCGA+TGG | + | tig0017897:170676-170695 | Msa1362670:intron | 30.0% | |
| !! | TATTTATTGGCGATGGATTT+TGG | + | tig0017897:170683-170702 | Msa1362670:intron | 30.0% |
| !! | ATTTATTGGCGATGGATTTT+GGG | + | tig0017897:170684-170703 | Msa1362670:intron | 30.0% |
| !!! | AATTGTTTTTGGACTACTTG+CGG | + | tig0017897:170806-170825 | Msa1362670:intron | 30.0% |
| !! | TTTGAGATCTTGGTTGTTTT+TGG | + | tig0017897:171414-171433 | Msa1362670:intron | 30.0% |
| !!! | TTGAGATCTTGGTTGTTTTT+GGG | + | tig0017897:171415-171434 | Msa1362670:intron | 30.0% |
| TTTGAGTAATTGTGATTGAG+AGG | + | tig0017897:171448-171467 | Msa1362670:intron | 30.0% | |
| TAATTGTGATTGAGAGGAAA+AGG | + | tig0017897:171454-171473 | Msa1362670:intron | 30.0% | |
| ! | CAATTTTCAAACCTCTCAAA+TGG | - | tig0017897:171540-171559 | None:intergenic | 30.0% |
| !! | CATCACAACTTCTAAGATAA+TGG | - | tig0017897:171565-171584 | None:intergenic | 30.0% |
| CATTATCTTAGAAGTTGTGA+TGG | + | tig0017897:171563-171582 | Msa1362670:intron | 30.0% | |
| ATACAGAGACAATTAAGGAT+TGG | - | tig0017897:171723-171742 | None:intergenic | 30.0% | |
| CAGTAATACAGAGACAATTA+AGG | - | tig0017897:171728-171747 | None:intergenic | 30.0% | |
| GACACACCTAAAAGTAAATT+GGG | - | tig0017897:171802-171821 | None:intergenic | 30.0% | |
| GAACTGAAAAGGAGAAGAAT+AGG | + | tig0017897:169042-169061 | Msa1362670:CDS | 35.0% | |
| GAACTGAAAAGGAGAAGAAT+AGG | + | tig0017897:169042-169061 | Msa1362670:CDS | 35.0% | |
| CAACTGAAAAGGAGAAGAAT+AGG | + | tig0017897:169150-169169 | Msa1362670:CDS | 35.0% | |
| CAACTGAAAAGGAGAAGAAT+AGG | + | tig0017897:169150-169169 | Msa1362670:CDS | 35.0% | |
| CAACTGAAAAGGAGAAGAAT+AGG | + | tig0017897:169150-169169 | Msa1362670:CDS | 35.0% | |
| ! | AATAGGTCTGGAACTGAAAA+GGG | + | tig0017897:169059-169078 | Msa1362670:CDS | 35.0% |
| !! | TTGATTTGTTTAACGCAGCT+TGG | + | tig0017897:169439-169458 | Msa1362670:intron | 35.0% |
| !! | TGATTTGTTTAACGCAGCTT+GGG | + | tig0017897:169440-169459 | Msa1362670:intron | 35.0% |
| ATGGAATAGCAAATGGACAT+TGG | + | tig0017897:169651-169670 | Msa1362670:intron | 35.0% | |
| AAAAAACCTTTGTCGTCCTT+AGG | - | tig0017897:169779-169798 | None:intergenic | 35.0% | |
| TATATTACAATCTTCCACGG+TGG | - | tig0017897:169908-169927 | None:intergenic | 35.0% | |
| GTGGTGCATCATAATATTTG+TGG | - | tig0017897:169949-169968 | None:intergenic | 35.0% | |
| ATGAGAAGAGAGATAAAGCT+GGG | - | tig0017897:170000-170019 | None:intergenic | 35.0% | |
| TGTACCATAACAGATTCTGT+AGG | + | tig0017897:170041-170060 | Msa1362670:intron | 35.0% | |
| ACTTCCTACAGAATCTGTTA+TGG | - | tig0017897:170048-170067 | None:intergenic | 35.0% | |
| ! | GTTAATTTGGTAGGAAAGGT+TGG | - | tig0017897:170094-170113 | None:intergenic | 35.0% |
| !! | TTTATTGGCGATGGATTTTG+GGG | + | tig0017897:170685-170704 | Msa1362670:intron | 35.0% |
| AGGACAAATACGAATGGAAT+TGG | + | tig0017897:170708-170727 | Msa1362670:intron | 35.0% | |
| !! | AGTTTTAGTGCTTGAAGGTT+GGG | + | tig0017897:170766-170785 | Msa1362670:intron | 35.0% |
| ! | CTGGTCTGTTTTGTGTTTTA+GGG | + | tig0017897:170866-170885 | Msa1362670:intron | 35.0% |
| !! | TGGTCTGTTTTGTGTTTTAG+GGG | + | tig0017897:170867-170886 | Msa1362670:intron | 35.0% |
| ! | AACTCACTGTTTTACATGAC+AGG | - | tig0017897:170912-170931 | None:intergenic | 35.0% |
| !! | AGCTGATTTCCTTTCCTTTT+AGG | + | tig0017897:170957-170976 | Msa1362670:intron | 35.0% |
| AAATTCGCGAATGAAGAAAC+TGG | - | tig0017897:171074-171093 | None:intergenic | 35.0% | |
| TTACAGTTGCATCCATGATA+AGG | - | tig0017897:171207-171226 | None:intergenic | 35.0% | |
| GAAATTCCCAGGTCTAATAA+TGG | + | tig0017897:171270-171289 | Msa1362670:intron | 35.0% | |
| ATGCAACCATTATTAGACCT+GGG | - | tig0017897:171279-171298 | None:intergenic | 35.0% | |
| AATGCAACCATTATTAGACC+TGG | - | tig0017897:171280-171299 | None:intergenic | 35.0% | |
| ! | GAAAATAATGATGTTGGTGG+TGG | - | tig0017897:171307-171326 | None:intergenic | 35.0% |
| ACCATTCGAGAAAGAATCAT+GGG | - | tig0017897:171377-171396 | None:intergenic | 35.0% | |
| TACCATTCGAGAAAGAATCA+TGG | - | tig0017897:171378-171397 | None:intergenic | 35.0% | |
| TCTTTCTCGAATGGTATCAA+CGG | + | tig0017897:171382-171401 | Msa1362670:intron | 35.0% | |
| !!! | GTTCGTAGTTTTTGAGATCT+TGG | + | tig0017897:171404-171423 | Msa1362670:intron | 35.0% |
| !!! | TTGGTTGTTTTTGGGTGAAT+CGG | + | tig0017897:171423-171442 | Msa1362670:intron | 35.0% |
| TATCTTAGAAGTTGTGATGG+TGG | + | tig0017897:171566-171585 | Msa1362670:intron | 35.0% | |
| TAGATGGAGAGAAAGAGATA+CGG | + | tig0017897:171606-171625 | Msa1362670:intron | 35.0% | |
| GGACACACCTAAAAGTAAAT+TGG | - | tig0017897:171803-171822 | None:intergenic | 35.0% | |
| !! | TTACTTTTAGGTGTGTCCTT+CGG | + | tig0017897:171805-171824 | Msa1362670:intron | 35.0% |
| TTATTCGATCCAAAAACCGA+AGG | - | tig0017897:171824-171843 | None:intergenic | 35.0% | |
| ATGATGGTTCGTAATCACAT+TGG | + | tig0017897:172123-172142 | Msa1362670:CDS | 35.0% | |
| AATTGACAATGCACTCAATG+AGG | + | tig0017897:172149-172168 | Msa1362670:CDS | 35.0% | |
| ! | TTCTTCTCCTTTTCAGTTCC+AGG | - | tig0017897:169041-169060 | None:intergenic | 40.0% |
| GAAAAGGAGAAGAATAGGTC+TGG | + | tig0017897:169047-169066 | Msa1362670:CDS | 40.0% | |
| ! | GAATAGGTCTGGAACTGAAA+AGG | + | tig0017897:169058-169077 | Msa1362670:CDS | 40.0% |
| GAACTGAAAAGGAGAAGAAG+AGG | + | tig0017897:169069-169088 | Msa1362670:CDS | 40.0% | |
| GAAAAGGAGAAGAATAGGTC+TGG | + | tig0017897:169047-169066 | Msa1362670:CDS | 40.0% | |
| ! | GAATAGGTCTGGAACTGAAA+AGG | + | tig0017897:169058-169077 | Msa1362670:CDS | 40.0% |
| GAACTGAAAAGGAGAAGAAG+AGG | + | tig0017897:169069-169088 | Msa1362670:CDS | 40.0% | |
| GAAAAGGAGAAGAATAGGTC+TGG | + | tig0017897:169047-169066 | Msa1362670:CDS | 40.0% | |
| ! | GAATAGGTCTGGAACTGAAA+AGG | + | tig0017897:169058-169077 | Msa1362670:CDS | 40.0% |
| GAACTGAAAAGGAGAAGAAG+AGG | + | tig0017897:169069-169088 | Msa1362670:CDS | 40.0% | |
| GAAAAGGAGAAGAATAGGTC+TGG | + | tig0017897:169047-169066 | Msa1362670:CDS | 40.0% | |
| ! | GAATAGGTCTGGAACTGAAA+AGG | + | tig0017897:169058-169077 | Msa1362670:CDS | 40.0% |
| GAACTGAAAAGGAGAAGAAG+AGG | + | tig0017897:169069-169088 | Msa1362670:CDS | 40.0% | |
| GAAAAGGAGAAGAATAGGTC+TGG | + | tig0017897:169047-169066 | Msa1362670:CDS | 40.0% | |
| ! | GAATAGGTCTGGAACTGAAA+AGG | + | tig0017897:169058-169077 | Msa1362670:CDS | 40.0% |
| ! | ATAGGTCTGGAACTGAAAAG+GGG | + | tig0017897:169060-169079 | Msa1362670:CDS | 40.0% |
| GCAAAAAGAAACCCAAGCAA+TGG | - | tig0017897:169401-169420 | None:intergenic | 40.0% | |
| AAGCAAAGACCTACCACAAA+AGG | + | tig0017897:169541-169560 | Msa1362670:CDS | 40.0% | |
| TTCCCTTTCCCTTTATTACC+AGG | + | tig0017897:169849-169868 | Msa1362670:intron | 40.0% | |
| AGCCTGGTAATAAAGGGAAA+GGG | - | tig0017897:169854-169873 | None:intergenic | 40.0% | |
| AGACTGAGCCTGGTAATAAA+GGG | - | tig0017897:169860-169879 | None:intergenic | 40.0% | |
| TAGACTGAGCCTGGTAATAA+AGG | - | tig0017897:169861-169880 | None:intergenic | 40.0% | |
| TTTATTACCAGGCTCAGTCT+AGG | + | tig0017897:169860-169879 | Msa1362670:intron | 40.0% | |
| TTATTACCAGGCTCAGTCTA+GGG | + | tig0017897:169861-169880 | Msa1362670:intron | 40.0% | |
| AAAGGAGATGTATAAGGCGT+TGG | - | tig0017897:169971-169990 | None:intergenic | 40.0% | |
| GATAAAGCTGGGATAGAGAA+AGG | - | tig0017897:169989-170008 | None:intergenic | 40.0% | |
| CATGAGAAGAGAGATAAAGC+TGG | - | tig0017897:170001-170020 | None:intergenic | 40.0% | |
| !! | AGGTTGGTGATTTGAAGGTA+GGG | - | tig0017897:170078-170097 | None:intergenic | 40.0% |
| !! | AAGGTTGGTGATTTGAAGGT+AGG | - | tig0017897:170079-170098 | None:intergenic | 40.0% |
| !! | AGGAAAGGTTGGTGATTTGA+AGG | - | tig0017897:170083-170102 | None:intergenic | 40.0% |
| AAGAACTTCTCACTGTCTGT+CGG | - | tig0017897:170326-170345 | None:intergenic | 40.0% | |
| GTGAGAAGTTCTTGAAACCA+AGG | + | tig0017897:170333-170352 | Msa1362670:intron | 40.0% | |
| !!! | TAGAATTGCATTTTGGGGTG+CGG | + | tig0017897:170397-170416 | Msa1362670:intron | 40.0% |
| TGTGTTTACTAGCCAAATGG+AGG | + | tig0017897:170439-170458 | Msa1362670:intron | 40.0% | |
| TCAAAAGACTACCGAGTTGT+TGG | + | tig0017897:170527-170546 | Msa1362670:intron | 40.0% | |
| TAAAGGGGTGAAAGAGATAG+TGG | + | tig0017897:170647-170666 | Msa1362670:intron | 40.0% | |
| !! | CAGTTTTAGTGCTTGAAGGT+TGG | + | tig0017897:170765-170784 | Msa1362670:intron | 40.0% |
| TCCAAAAACAATTGAGCCGA+AGG | - | tig0017897:170799-170818 | None:intergenic | 40.0% | |
| !! | GCTGGTCTGTTTTGTGTTTT+AGG | + | tig0017897:170865-170884 | Msa1362670:intron | 40.0% |
| !! | GGTCTGTTTTGTGTTTTAGG+GGG | + | tig0017897:170868-170887 | Msa1362670:intron | 40.0% |
| CTAACATCAAGACCCAAAAC+TGG | - | tig0017897:170939-170958 | None:intergenic | 40.0% | |
| !!! | TCGGTTGTTGTGGTGTTTTT+TGG | + | tig0017897:171005-171024 | Msa1362670:intron | 40.0% |
| !!! | CGGTTGTTGTGGTGTTTTTT+GGG | + | tig0017897:171006-171025 | Msa1362670:intron | 40.0% |
| !!! | AATTTTTAGTGCGCCTTGCA+CGG | + | tig0017897:171089-171108 | Msa1362670:intron | 40.0% |
| GGAATTTCACAAGGTTCTTC+TGG | - | tig0017897:171258-171277 | None:intergenic | 40.0% | |
| AAGAACCTTGTGAAATTCCC+AGG | + | tig0017897:171259-171278 | Msa1362670:intron | 40.0% | |
| TTAGACCTGGGAATTTCACA+AGG | - | tig0017897:171267-171286 | None:intergenic | 40.0% | |
| ACCCATGATTCTTTCTCGAA+TGG | + | tig0017897:171373-171392 | Msa1362670:intron | 40.0% | |
| GTGATTGAGAGGAAAAGGAA+AGG | + | tig0017897:171459-171478 | Msa1362670:intron | 40.0% | |
| AGAGATAAGGTCCATTTGAG+AGG | + | tig0017897:171526-171545 | Msa1362670:intron | 40.0% | |
| GGTAGAAGAGAGAGTTTAGA+TGG | + | tig0017897:171590-171609 | Msa1362670:intron | 40.0% | |
| GTGAATTATCTGCAAGTGCT+TGG | - | tig0017897:171646-171665 | None:intergenic | 40.0% | |
| AGATAATTCACTCATCCACG+AGG | + | tig0017897:171655-171674 | Msa1362670:intron | 40.0% | |
| GATAATTCACTCATCCACGA+GGG | + | tig0017897:171656-171675 | Msa1362670:intron | 40.0% | |
| ! | TAATAAGGCACCTTCTAAGG+TGG | - | tig0017897:171700-171719 | None:intergenic | 40.0% |
| ! | TGGTAATAAGGCACCTTCTA+AGG | - | tig0017897:171703-171722 | None:intergenic | 40.0% |
| TTGAGACAGTGTTCTCTTGT+AGG | + | tig0017897:171756-171775 | Msa1362670:intron | 40.0% | |
| TGAGACAGTGTTCTCTTGTA+GGG | + | tig0017897:171757-171776 | Msa1362670:intron | 40.0% | |
| CAAACATCATCCAACTTGGT+GGG | - | tig0017897:172018-172037 | None:intergenic | 40.0% | |
| GAAAAGGAGAAGAAGAGGTC+TGG | + | tig0017897:169074-169093 | Msa1362670:CDS | 45.0% | |
| ! | GAAGAGGTCTGGAACTGAAA+AGG | + | tig0017897:169085-169104 | Msa1362670:CDS | 45.0% |
| GAAGAGGTCTGCAACTGAAA+AGG | + | tig0017897:169139-169158 | Msa1362670:CDS | 45.0% | |
| GAAGAGGTCTGCAACTGAAA+AGG | + | tig0017897:169139-169158 | Msa1362670:CDS | 45.0% | |
| GAAGAGGTCTGCAACTGAAA+AGG | + | tig0017897:169139-169158 | Msa1362670:CDS | 45.0% | |
| GAACTGAAAAGGGGAAGAAG+AGG | + | tig0017897:169285-169304 | Msa1362670:CDS | 45.0% | |
| TCACGCATCTCCCAAAAAGA+CGG | + | tig0017897:169325-169344 | Msa1362670:CDS | 45.0% | |
| ! | TCGTCGTTGACCGTCTTTTT+GGG | - | tig0017897:169338-169357 | None:intergenic | 45.0% |
| ! | TTCGTCGTTGACCGTCTTTT+TGG | - | tig0017897:169339-169358 | None:intergenic | 45.0% |
| GAAATCGTCGTATGTGAGGT+CGG | + | tig0017897:169356-169375 | Msa1362670:intron | 45.0% | |
| AAACCCAAGCAATGGAGTTG+GGG | - | tig0017897:169393-169412 | None:intergenic | 45.0% | |
| GAAACCCAAGCAATGGAGTT+GGG | - | tig0017897:169394-169413 | None:intergenic | 45.0% | |
| AGAAACCCAAGCAATGGAGT+TGG | - | tig0017897:169395-169414 | None:intergenic | 45.0% | |
| GGAAGGTTTCTGTGAAGCAT+TGG | + | tig0017897:169470-169489 | Msa1362670:CDS | 45.0% | |
| !! | TCTGTGAAGCATTGGAACGA+AGG | + | tig0017897:169478-169497 | Msa1362670:CDS | 45.0% |
| !! | CTGTGAAGCATTGGAACGAA+GGG | + | tig0017897:169479-169498 | Msa1362670:CDS | 45.0% |
| ! | AGCATTGGAACGAAGGGATT+CGG | + | tig0017897:169485-169504 | Msa1362670:CDS | 45.0% |
| CAAAAGCCTAAGGACGACAA+AGG | + | tig0017897:169770-169789 | Msa1362670:intron | 45.0% | |
| GAGCCTGGTAATAAAGGGAA+AGG | - | tig0017897:169855-169874 | None:intergenic | 45.0% | |
| !! | GGTTGGTGATTTGAAGGTAG+GGG | - | tig0017897:170077-170096 | None:intergenic | 45.0% |
| !!! | AGAATTGCATTTTGGGGTGC+GGG | + | tig0017897:170398-170417 | Msa1362670:intron | 45.0% |
| GTTTACTAGCCAAATGGAGG+CGG | + | tig0017897:170442-170461 | Msa1362670:intron | 45.0% | |
| TTTACTAGCCAAATGGAGGC+GGG | + | tig0017897:170443-170462 | Msa1362670:intron | 45.0% | |
| ! | ACGCGGCGATTTGGAAAATT+TGG | + | tig0017897:170589-170608 | Msa1362670:intron | 45.0% |
| TTGGGGAGGACAAATACGAA+TGG | + | tig0017897:170702-170721 | Msa1362670:intron | 45.0% | |
| CGAATGGAATTGGAACCTGA+TGG | + | tig0017897:170718-170737 | Msa1362670:intron | 45.0% | |
| ! | ATGGAATGCTTGTTGCGCTA+AGG | + | tig0017897:170737-170756 | Msa1362670:intron | 45.0% |
| ! | TGGAATGCTTGTTGCGCTAA+GGG | + | tig0017897:170738-170757 | Msa1362670:intron | 45.0% |
| !! | TGGGCAGTTTTAGTGCTTGA+AGG | + | tig0017897:170761-170780 | Msa1362670:intron | 45.0% |
| ! | GCCTTCGGCTCAATTGTTTT+TGG | + | tig0017897:170795-170814 | Msa1362670:intron | 45.0% |
| !!! | TTGCGGTGCTGCCATATTTT+CGG | + | tig0017897:170823-170842 | Msa1362670:intron | 45.0% |
| CTGTGCACAGTCCGAAAATA+TGG | - | tig0017897:170837-170856 | None:intergenic | 45.0% | |
| ! | CATATTTTCGGACTGTGCAC+AGG | + | tig0017897:170835-170854 | Msa1362670:intron | 45.0% |
| ! | AGTGAGTTGCTGCCAGTTTT+GGG | + | tig0017897:170924-170943 | Msa1362670:intron | 45.0% |
| CAGCAGCTACCTAAAAGGAA+AGG | - | tig0017897:170969-170988 | None:intergenic | 45.0% | |
| TATTAACGACGAACCGTGCA+AGG | - | tig0017897:171105-171124 | None:intergenic | 45.0% | |
| TCACAAGGTTCTTCTGGTCA+TGG | - | tig0017897:171252-171271 | None:intergenic | 45.0% | |
| !! | CTTAGAAGTTGTGATGGTGG+AGG | + | tig0017897:171569-171588 | Msa1362670:intron | 45.0% |
| ATCTGCAAGTGCTTGGTATG+CGG | - | tig0017897:171639-171658 | None:intergenic | 45.0% | |
| GTAACTCATATCATCCCTCG+TGG | - | tig0017897:171673-171692 | None:intergenic | 45.0% | |
| AGTTACCCATCCACCTTAGA+AGG | + | tig0017897:171687-171706 | Msa1362670:intron | 45.0% | |
| ! | TAGGTGTGTCCTTCGGTTTT+TGG | + | tig0017897:171812-171831 | Msa1362670:intron | 45.0% |
| ! | ATCATCCAACTTGGTGGGAA+GGG | - | tig0017897:172013-172032 | None:intergenic | 45.0% |
| CCAAACATCATCCAACTTGG+TGG | - | tig0017897:172019-172038 | None:intergenic | 45.0% | |
| ! | CCACCAAGTTGGATGATGTT+TGG | + | tig0017897:172016-172035 | Msa1362670:intron | 45.0% |
| CCACCAAACATCATCCAACT+TGG | - | tig0017897:172022-172041 | None:intergenic | 45.0% | |
| ! | CCAAGTTGGATGATGTTTGG+TGG | + | tig0017897:172019-172038 | Msa1362670:intron | 45.0% |
| ! | AGTTGGATGATGTTTGGTGG+TGG | + | tig0017897:172022-172041 | Msa1362670:intron | 45.0% |
| AGGAACCTCATTGACCATGT+CGG | + | tig0017897:172095-172114 | Msa1362670:intron | 45.0% | |
| AACCATCATCAACTCCGACA+TGG | - | tig0017897:172112-172131 | None:intergenic | 45.0% | |
| CGACGAAATCGTCGTATGTG+AGG | + | tig0017897:169352-169371 | Msa1362670:intron | 50.0% | |
| ! | CAATGGAGTTGGGGGTTTTG+AGG | - | tig0017897:169384-169403 | None:intergenic | 50.0% |
| AAACCCCCAACTCCATTGCT+TGG | + | tig0017897:169386-169405 | Msa1362670:intron | 50.0% | |
| AACCCCCAACTCCATTGCTT+GGG | + | tig0017897:169387-169406 | Msa1362670:intron | 50.0% | |
| AACCCAAGCAATGGAGTTGG+GGG | - | tig0017897:169392-169411 | None:intergenic | 50.0% | |
| TAACGCAGCTTGGGACAAAG+AGG | + | tig0017897:169449-169468 | Msa1362670:intron | 50.0% | |
| CTAGGGTGGATGAGCTTGAT+AGG | + | tig0017897:169878-169897 | Msa1362670:intron | 50.0% | |
| !! | GGAGATGTATAAGGCGTTGG+TGG | - | tig0017897:169968-169987 | None:intergenic | 50.0% |
| TTACTAGCCAAATGGAGGCG+GGG | + | tig0017897:170444-170463 | Msa1362670:intron | 50.0% | |
| TGGAAGGGGATAACGCTCTT+TGG | + | tig0017897:170473-170492 | Msa1362670:intron | 50.0% | |
| AGGGGATAACGCTCTTTGGA+TGG | + | tig0017897:170477-170496 | Msa1362670:intron | 50.0% | |
| GGATAACGCTCTTTGGATGG+AGG | + | tig0017897:170480-170499 | Msa1362670:intron | 50.0% | |
| !! | TCTTTGGATGGAGGTGTTGG+TGG | + | tig0017897:170489-170508 | Msa1362670:intron | 50.0% |
| AGACTACCGAGTTGTTGGTG+AGG | + | tig0017897:170532-170551 | Msa1362670:intron | 50.0% | |
| ! | GACTACCGAGTTGTTGGTGA+GGG | + | tig0017897:170533-170552 | Msa1362670:intron | 50.0% |
| ! | ACTACCGAGTTGTTGGTGAG+GGG | + | tig0017897:170534-170553 | Msa1362670:intron | 50.0% |
| ACTACCCCTCACCAACAACT+CGG | - | tig0017897:170541-170560 | None:intergenic | 50.0% | |
| ! | TGTTGGTGAGGGGTAGTACT+TGG | + | tig0017897:170544-170563 | Msa1362670:intron | 50.0% |
| TGCCAAATCAACCTCAAGCG+CGG | - | tig0017897:170570-170589 | None:intergenic | 50.0% | |
| !! | CTTGAGGTTGATTTGGCACG+CGG | + | tig0017897:170572-170591 | Msa1362670:intron | 50.0% |
| ! | AGGGGTGAAAGAGATAGTGG+AGG | + | tig0017897:170650-170669 | Msa1362670:intron | 50.0% |
| !! | ATTGGCGATGGATTTTGGGG+AGG | + | tig0017897:170688-170707 | Msa1362670:intron | 50.0% |
| AGCGCAACAAGCATTCCATC+AGG | - | tig0017897:170736-170755 | None:intergenic | 50.0% | |
| ! | AATGCTTGTTGCGCTAAGGG+TGG | + | tig0017897:170741-170760 | Msa1362670:intron | 50.0% |
| ! | ATGCTTGTTGCGCTAAGGGT+GGG | + | tig0017897:170742-170761 | Msa1362670:intron | 50.0% |
| CATGACAGGAGAATCGCAAC+AGG | - | tig0017897:170898-170917 | None:intergenic | 50.0% | |
| ! | CAGTGAGTTGCTGCCAGTTT+TGG | + | tig0017897:170923-170942 | Msa1362670:intron | 50.0% |
| ACTGGCAGCAGCTACCTAAA+AGG | - | tig0017897:170974-170993 | None:intergenic | 50.0% | |
| ! | TAGGTAGCTGCTGCCAGTTT+TGG | + | tig0017897:170976-170995 | Msa1362670:intron | 50.0% |
| ! | AGGTAGCTGCTGCCAGTTTT+GGG | + | tig0017897:170977-170996 | Msa1362670:intron | 50.0% |
| !!! | CTGCCAGTTTTGGGTGCTAT+CGG | + | tig0017897:170986-171005 | Msa1362670:intron | 50.0% |
| CAACCGATAGCACCCAAAAC+TGG | - | tig0017897:170992-171011 | None:intergenic | 50.0% | |
| ! | TTGGGTGCTATCGGTTGTTG+TGG | + | tig0017897:170995-171014 | Msa1362670:intron | 50.0% |
| AGGTTCTTCTGGTCATGGCT+TGG | - | tig0017897:171247-171266 | None:intergenic | 50.0% | |
| !! | AGGCACCTTCTAAGGTGGAT+GGG | - | tig0017897:171695-171714 | None:intergenic | 50.0% |
| !! | AAGGCACCTTCTAAGGTGGA+TGG | - | tig0017897:171696-171715 | None:intergenic | 50.0% |
| TCATTCCCTTCCCACCAAGT+TGG | + | tig0017897:172005-172024 | Msa1362670:intron | 50.0% | |
| ! | CATCATCCAACTTGGTGGGA+AGG | - | tig0017897:172014-172033 | None:intergenic | 50.0% |
| CAACTCCGACATGGTCAATG+AGG | - | tig0017897:172103-172122 | None:intergenic | 50.0% | |
| !! | GACCATGTCGGAGTTGATGA+TGG | + | tig0017897:172107-172126 | Msa1362670:CDS | 50.0% |
| GCAGCTTGGGACAAAGAGGA+AGG | + | tig0017897:169453-169472 | Msa1362670:intron | 55.0% | |
| TTACCAGGCTCAGTCTAGGG+TGG | + | tig0017897:169864-169883 | Msa1362670:intron | 55.0% | |
| GCTTGATAGGTCTTCCACCG+TGG | + | tig0017897:169891-169910 | Msa1362670:intron | 55.0% | |
| TACTAGCCAAATGGAGGCGG+GGG | + | tig0017897:170445-170464 | Msa1362670:intron | 55.0% | |
| ! | CGCTCTTTGGATGGAGGTGT+TGG | + | tig0017897:170486-170505 | Msa1362670:intron | 55.0% |
| ! | TGATTTGGCACGCGGCGATT+TGG | + | tig0017897:170580-170599 | Msa1362670:intron | 55.0% |
| AAGGTTGGGCATGCTGCCTT+CGG | + | tig0017897:170780-170799 | Msa1362670:intron | 55.0% | |
| CATCCACCCTAGACTGAGCC+TGG | - | tig0017897:169870-169889 | None:intergenic | 60.0% | |
| TGGGGTGCGGGATGTCAAAG+TGG | + | tig0017897:170410-170429 | Msa1362670:intron | 60.0% | |
| ACTAGCCAAATGGAGGCGGG+GGG | + | tig0017897:170446-170465 | Msa1362670:intron | 60.0% | |
| GTAGTACTTGGCCGCGCTTG+AGG | + | tig0017897:170556-170575 | Msa1362670:intron | 60.0% | |
| ! | GGCCGCGCTTGAGGTTGATT+TGG | + | tig0017897:170565-170584 | Msa1362670:intron | 60.0% |
| CTGTGCACAGGTTCTGCTGC+TGG | + | tig0017897:170847-170866 | Msa1362670:intron | 60.0% | |
| ACCAACCCCCCGCCTCCATT+TGG | - | tig0017897:170454-170473 | None:intergenic | 65.0% | |
| AAATGGAGGCGGGGGGTTGG+TGG | + | tig0017897:170453-170472 | Msa1362670:intron | 65.0% | |
| GCCAAATGGAGGCGGGGGGT+TGG | + | tig0017897:170450-170469 | Msa1362670:intron | 70.0% | |
| !! | GAGGCGGGGGGTTGGTGGAA+GGG | + | tig0017897:170458-170477 | Msa1362670:intron | 70.0% |
| !! | AGGCGGGGGGTTGGTGGAAG+GGG | + | tig0017897:170459-170478 | Msa1362670:intron | 70.0% |
| !! | GGAGGCGGGGGGTTGGTGGA+AGG | + | tig0017897:170457-170476 | Msa1362670:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0017897 | gene | 169035 | 172179 | 169035 | ID=Msa1362670;Name=Msa1362670 |
| tig0017897 | mRNA | 169035 | 172179 | 169035 | ID=Msa1362670-mRNA-1;Parent=Msa1362670;Name=Msa1362670-mRNA-1;_AED=0.38;_eAED=0.38;_QI=0|0|0|0.5|0.33|0.5|4|0|163 |
| tig0017897 | exon | 169035 | 169252 | 169035 | ID=Msa1362670-mRNA-1:exon:13141;Parent=Msa1362670-mRNA-1 |
| tig0017897 | exon | 169280 | 169364 | 169280 | ID=Msa1362670-mRNA-1:exon:13142;Parent=Msa1362670-mRNA-1 |
| tig0017897 | exon | 169457 | 169562 | 169457 | ID=Msa1362670-mRNA-1:exon:13143;Parent=Msa1362670-mRNA-1 |
| tig0017897 | exon | 172097 | 172179 | 172097 | ID=Msa1362670-mRNA-1:exon:13144;Parent=Msa1362670-mRNA-1 |
| tig0017897 | CDS | 169035 | 169252 | 169035 | ID=Msa1362670-mRNA-1:cds;Parent=Msa1362670-mRNA-1 |
| tig0017897 | CDS | 169280 | 169364 | 169280 | ID=Msa1362670-mRNA-1:cds;Parent=Msa1362670-mRNA-1 |
| tig0017897 | CDS | 169457 | 169562 | 169457 | ID=Msa1362670-mRNA-1:cds;Parent=Msa1362670-mRNA-1 |
| tig0017897 | CDS | 172097 | 172179 | 172097 | ID=Msa1362670-mRNA-1:cds;Parent=Msa1362670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
