AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1315530

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1315530 MtrunA17_Chr8g0345211 82.222 45 8 0 75 119 313 357 5.19e-18 81.3
Msa1315530 MtrunA17_Chr8g0354901 68.085 47 15 0 70 116 310 356 2.81e-15 73.6
Msa1315530 MtrunA17_Chr3g0080391 50.000 66 33 0 51 116 284 349 1.10e-14 71.6
Msa1315530 MtrunA17_Chr4g0069841 38.961 77 35 2 46 116 216 286 6.82e-13 66.2
Msa1315530 MtrunA17_Chr2g0302021 32.673 101 63 2 45 140 224 324 8.06e-13 66.2
Msa1315530 MtrunA17_Chr4g0069861 38.889 72 44 0 45 116 216 287 8.54e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1315530 AT1G53840.1 67.391 46 15 0 71 116 316 361 4.84e-15 73.2
Msa1315530 AT5G04960.1 51.613 62 24 1 55 116 283 338 5.77e-14 70.1
Msa1315530 AT3G10710.1 34.513 113 59 2 70 178 290 391 6.40e-13 67.0
Msa1315530 AT3G43270.1 33.333 102 63 2 44 140 223 324 3.79e-12 64.7
Msa1315530 AT4G33220.1 33.058 121 69 3 32 140 202 322 4.08e-12 64.7
Msa1315530 AT4G33220.2 33.058 121 69 3 32 140 81 201 4.55e-12 64.3

Find 64 sgRNAs with CRISPR-Local

Find 552 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCAGTAATATACAAATTTC+AGG 0.187791 8_4:-15005739 Msa1315530:intron
CTCTCTTTATCTTCTTCTTC+TGG 0.207939 8_4:-15013432 Msa1315530:CDS
CATCTTTGTTATCTTCATTA+TGG 0.247498 8_4:-15013467 Msa1315530:CDS
ATCTTCATTATGGTCCTCTT+TGG 0.275700 8_4:-15013457 Msa1315530:CDS
TATTTCCTTTCTTACTTTGT+CGG 0.303938 8_4:-15003443 Msa1315530:three_prime_UTR
TTTATATATAGATGTTGATA+TGG 0.339606 8_4:+15003603 None:intergenic
ATTGGAGAGAAGTTTGATAA+TGG 0.340256 8_4:-15006655 Msa1315530:exon
ACATGGAATGTGATGATTAA+TGG 0.349127 8_4:-15012994 Msa1315530:CDS
TTATAGACCATCCATTCATT+TGG 0.360233 8_4:+15007378 None:intergenic
TTAAATTTGATAGCTATATC+AGG 0.360340 8_4:+15003677 None:intergenic
CAGAAATTCAAAAGGGATGA+AGG 0.374176 8_4:-15006858 Msa1315530:CDS
TTATCTTCTTCTTCTGGCCA+TGG 0.376144 8_4:-15013426 Msa1315530:CDS
TGCAAGTGACATTTGATTTG+AGG 0.391666 8_4:+15003747 None:intergenic
GTATGTAGAGAATATTGATT+TGG 0.406604 8_4:-15013025 Msa1315530:CDS
GGTGACACAAATATAAAGTA+TGG 0.418765 8_4:+15013309 None:intergenic
CTATTCTCTTACAATCTCTC+TGG 0.420293 8_4:-15007445 Msa1315530:CDS
TCCGCGATTTATACTGGTAA+AGG 0.425844 8_4:-15003794 Msa1315530:three_prime_UTR
ATGACAGAAACCGTCGTATC+CGG 0.430752 8_4:-15012964 Msa1315530:CDS
GTGAGTTGTGCTGGTCTAGA+TGG 0.431552 8_4:+15013399 None:intergenic
GGCTTTAGGATTGGAGACTC+TGG 0.432889 8_4:-15003920 Msa1315530:intron
GTTCATGAGAAACGAACATT+TGG 0.433246 8_4:+15003578 None:intergenic
ACCTTCGAAACCGCCACTTT+CGG 0.437741 8_4:-15012913 Msa1315530:intron
TATTCAATATATAGACCATA+AGG 0.439287 8_4:-15004096 Msa1315530:intron
CCGCGATTTATACTGGTAAA+GGG 0.439289 8_4:-15003793 Msa1315530:three_prime_UTR
TTAGAAGATGTGAGTTGTGC+TGG 0.449965 8_4:+15013390 None:intergenic
TTTAACTAGAGCCTTTCCTT+TGG 0.464265 8_4:-15003543 Msa1315530:three_prime_UTR
ATGTAAACACGTACCGAAAG+TGG 0.473602 8_4:+15012900 None:intergenic
GAATGGATGGTCTATAACTC+AGG 0.479748 8_4:-15007372 Msa1315530:intron
ATGAGGCAACTCCAAATGAA+TGG 0.480703 8_4:-15007389 Msa1315530:CDS
GGAGGCTCCGCGATTTATAC+TGG 0.485199 8_4:-15003800 Msa1315530:three_prime_UTR
AAAGTGGCGGTTTCGAAGGT+TGG 0.489391 8_4:+15012916 None:intergenic
GCCTTTCTTCTCAAGTCATA+CGG 0.508836 8_4:-15003848 Msa1315530:three_prime_UTR
ATAAACCGACAAAGTAAGAA+AGG 0.510637 8_4:+15003438 None:intergenic
CATTTGATTTGAGGATAAAG+AGG 0.510651 8_4:+15003756 None:intergenic
ATCAAAACATTCAACAAAAG+AGG 0.513537 8_4:+15013347 None:intergenic
AAGTATGGTGAATGAGTGAT+TGG 0.524621 8_4:+15013324 None:intergenic
GTCATACGGTGCATACATGT+GGG 0.540509 8_4:-15003834 Msa1315530:three_prime_UTR
TTGATTTGGATAAGAGTACA+TGG 0.545413 8_4:-15013011 Msa1315530:CDS
AGTCATACGGTGCATACATG+TGG 0.552933 8_4:-15003835 Msa1315530:three_prime_UTR
GGTACAAGTAGAGGTGATAG+TGG 0.554655 8_4:+15013288 None:intergenic
GTCGATGAAACTCCAGCTAC+CGG 0.555040 8_4:+15012945 None:intergenic
GCACAACTCACATCTTCTAA+AGG 0.556848 8_4:-15013387 Msa1315530:CDS
ACCGAAAGTGGCGGTTTCGA+AGG 0.556871 8_4:+15012912 None:intergenic
TACATGTGGGGTTATTTGTG+TGG 0.573851 8_4:-15003821 Msa1315530:three_prime_UTR
GGCAACTCCAAATGAATGGA+TGG 0.584406 8_4:-15007385 Msa1315530:CDS
TATGTTGATGAGTGCTGAAG+AGG 0.589153 8_4:-15006625 Msa1315530:intron
ACTATTAATATCCAAAGGAA+AGG 0.589242 8_4:+15003532 None:intergenic
TCTAGTTAAAGCGTATACAT+AGG 0.590929 8_4:+15003556 None:intergenic
TGTGTATCTAGTAGTTGCAA+TGG 0.592378 8_4:+15003885 None:intergenic
GAAGCTAAAACGATATTCAG+AGG 0.595773 8_4:+15003625 None:intergenic
ATGTGGGGTTATTTGTGTGG+AGG 0.607763 8_4:-15003818 Msa1315530:three_prime_UTR
ACCGTATGACTTGAGAAGAA+AGG 0.608857 8_4:+15003847 None:intergenic
TTGTTGCAGGGTACAAGTAG+AGG 0.609176 8_4:+15013279 None:intergenic
TATGAACTATTAATATCCAA+AGG 0.612972 8_4:+15003527 None:intergenic
ACTACTAGCTTATGCATGTG+AGG 0.626348 8_4:-15005762 Msa1315530:three_prime_UTR
CAGAAGAAGAAGATAAAGAG+AGG 0.638744 8_4:+15013433 None:intergenic
AGATAAAGAGAGGACCAAAG+AGG 0.639251 8_4:+15013443 None:intergenic
AATGTGATGATTAATGGTGA+TGG 0.642955 8_4:-15012988 Msa1315530:CDS
CTGGTCTAGATGGAACTCCA+TGG 0.650383 8_4:+15013409 None:intergenic
CCCTTTACCAGTATAAATCG+CGG 0.661490 8_4:+15003793 None:intergenic
ACTCCAGCTACCGGATACGA+CGG 0.680060 8_4:+15012954 None:intergenic
TCATACGGTGCATACATGTG+GGG 0.706711 8_4:-15003833 Msa1315530:three_prime_UTR
GGTAGCTGGAGTTTCATCGA+CGG 0.724180 8_4:-15012943 Msa1315530:CDS
TAAACACGTACCGAAAGTGG+CGG 0.746288 8_4:+15012903 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATATATATATATAATT+GGG + chr8_4:15004404-15004423 None:intergenic 0.0%
!! ATAAAATATATATATATAAT+TGG + chr8_4:15004405-15004424 None:intergenic 0.0%
!! ATATATATATATATATATAT+GGG + chr8_4:15008440-15008459 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG + chr8_4:15008441-15008460 None:intergenic 0.0%
!!! AGAACTTTTTAAATTATTTT+TGG + chr8_4:15005917-15005936 None:intergenic 10.0%
!! AAAAATAATTTAAAAAGTTC+TGG - chr8_4:15005916-15005935 Msa1315530:three_prime_UTR 10.0%
!!! CATATACAATATTATTTTTT+TGG + chr8_4:15006123-15006142 None:intergenic 10.0%
!!! TTTTTCTATAATAATGTTTT+GGG + chr8_4:15006770-15006789 None:intergenic 10.0%
!!! TTTTTTCTATAATAATGTTT+TGG + chr8_4:15006771-15006790 None:intergenic 10.0%
!! TTATAGAAAAAAATTGTTTA+AGG - chr8_4:15006779-15006798 Msa1315530:intron 10.0%
!!! ATTAAAAAAAGTTTTTTGTT+TGG + chr8_4:15007016-15007035 None:intergenic 10.0%
!! AAAAAAATAAAATTTAGAGA+CGG + chr8_4:15007843-15007862 None:intergenic 10.0%
!! AATGATAATAATAAATTGTT+TGG - chr8_4:15008143-15008162 Msa1315530:intron 10.0%
!! AAAAATGATAATAAGTTTAT+CGG - chr8_4:15008170-15008189 Msa1315530:intron 10.0%
!!! TAATTTGTTTATAATAAAGT+GGG + chr8_4:15008651-15008670 None:intergenic 10.0%
!!! ATAATTTGTTTATAATAAAG+TGG + chr8_4:15008652-15008671 None:intergenic 10.0%
!! AAAATTGATACAAAATATAA+TGG + chr8_4:15010823-15010842 None:intergenic 10.0%
!!! TTTATATATATTTTTGTTAC+AGG - chr8_4:15010955-15010974 Msa1315530:intron 10.0%
!!! TTATTTGAAGTTTAATTAAA+TGG - chr8_4:15011043-15011062 Msa1315530:intron 10.0%
!! CAATTTATCAATAAAATTTA+AGG - chr8_4:15011494-15011513 Msa1315530:intron 10.0%
!!! TTTTTTTTTTTACTTTTGAT+TGG - chr8_4:15012259-15012278 Msa1315530:intron 10.0%
!! ATATCTGATAATACTAATTA+AGG - chr8_4:15004264-15004283 Msa1315530:intron 15.0%
!! ATAAATCAAAATGTATAGAA+TGG - chr8_4:15004371-15004390 Msa1315530:intron 15.0%
!!! AATAAATATAATCTAGCTTA+GGG + chr8_4:15004912-15004931 None:intergenic 15.0%
!!! AAATAAATATAATCTAGCTT+AGG + chr8_4:15004913-15004932 None:intergenic 15.0%
!!! TTATATATAAGGACATTTTT+CGG + chr8_4:15005176-15005195 None:intergenic 15.0%
!!! TGATACAATATACAAATTTT+AGG - chr8_4:15005442-15005461 Msa1315530:intron 15.0%
!!! ACAAATCTAAAATGATATAT+AGG + chr8_4:15005989-15006008 None:intergenic 15.0%
!!! ATACAATATTATTTTTTTGG+TGG + chr8_4:15006120-15006139 None:intergenic 15.0%
!!! GAATAATAAATATAGTTTGT+TGG + chr8_4:15006208-15006227 None:intergenic 15.0%
!! TAACTCTAATATTATATTGT+TGG + chr8_4:15006281-15006300 None:intergenic 15.0%
!!! ATTAGAGTTAAATATGTTTT+TGG - chr8_4:15006291-15006310 Msa1315530:intron 15.0%
!!! AATTCTAATTTTTTTTGGAA+AGG - chr8_4:15006556-15006575 Msa1315530:intron 15.0%
!! GAAAAGTTAGTATATTTATA+TGG - chr8_4:15006727-15006746 Msa1315530:intron 15.0%
!! AAAAAATATAAAAGAATAGG+TGG - chr8_4:15007090-15007109 Msa1315530:intron 15.0%
!! GTTATAATTAATAGCAAATA+AGG - chr8_4:15007162-15007181 Msa1315530:intron 15.0%
!!! TTATGTTTTTTGATTTATCT+TGG + chr8_4:15007283-15007302 None:intergenic 15.0%
!! AAATATGTTTGATAAAAGTA+GGG + chr8_4:15007715-15007734 None:intergenic 15.0%
!! AAAATATGTTTGATAAAAGT+AGG + chr8_4:15007716-15007735 None:intergenic 15.0%
!!! CTAACAAATTTTTTTTTGAA+AGG + chr8_4:15008199-15008218 None:intergenic 15.0%
!!! CTTTCAAAAAAAAATTTGTT+AGG - chr8_4:15008197-15008216 Msa1315530:intron 15.0%
!!! AAAATTTGTTAGGATATATT+TGG - chr8_4:15008207-15008226 Msa1315530:intron 15.0%
!!! GGTTGATATATATATATATA+GGG - chr8_4:15008232-15008251 Msa1315530:intron 15.0%
!! ATCTTAATAATATACAAACA+TGG - chr8_4:15008739-15008758 Msa1315530:intron 15.0%
!! TATTATGTAAATGCTTAAAA+TGG + chr8_4:15008860-15008879 None:intergenic 15.0%
!! TATAGAAAATAATGTTTGTT+GGG + chr8_4:15008984-15009003 None:intergenic 15.0%
!! ATATAGAAAATAATGTTTGT+TGG + chr8_4:15008985-15009004 None:intergenic 15.0%
!! TTTCAAATTTATAGTGATTA+AGG + chr8_4:15009644-15009663 None:intergenic 15.0%
!!! AAATACAAATTTTGTTGTTT+TGG - chr8_4:15009749-15009768 Msa1315530:intron 15.0%
!!! TTTAAAAGTTACAATTTTGT+TGG - chr8_4:15009901-15009920 Msa1315530:intron 15.0%
!!! AAACATTGATTGATTTTAAT+GGG - chr8_4:15010122-15010141 Msa1315530:intron 15.0%
!! TGAAAGTTAAATTCAAAAAT+TGG - chr8_4:15010223-15010242 Msa1315530:intron 15.0%
!! AGTAAAAAAAATAGACAAAA+AGG + chr8_4:15011364-15011383 None:intergenic 15.0%
!!! ATAAAATTTAAGGTTGTTTA+AGG - chr8_4:15011504-15011523 Msa1315530:intron 15.0%
!!! TTCTTTTCATTTCTAATTTA+CGG + chr8_4:15011640-15011659 None:intergenic 15.0%
!! AAATAAAATTATTCAACATG+TGG + chr8_4:15011903-15011922 None:intergenic 15.0%
!! CTAACTATTAATGATAATAA+GGG + chr8_4:15012358-15012377 None:intergenic 15.0%
!! ACTAACTATTAATGATAATA+AGG + chr8_4:15012359-15012378 None:intergenic 15.0%
!! TTTATATATAGATGTTGATA+TGG + chr8_4:15013296-15013315 None:intergenic 15.0%
!! GAAATAATAATATTGTTGCA+GGG + chr8_4:15003632-15003651 None:intergenic 20.0%
!! TCTATGTTATTATTTACTTG+AGG - chr8_4:15003712-15003731 Msa1315530:three_prime_UTR 20.0%
!! AATACTAATTAAGGTATGTT+TGG - chr8_4:15004273-15004292 Msa1315530:intron 20.0%
!!! TTACAATTTTAATAAGAGAC+TGG + chr8_4:15004792-15004811 None:intergenic 20.0%
!! TTAGGGTTATATATGTTAAT+TGG + chr8_4:15004830-15004849 None:intergenic 20.0%
!! TACTTTATCTACTATTTCAA+AGG - chr8_4:15004951-15004970 Msa1315530:intron 20.0%
!! ACTTTATCTACTATTTCAAA+GGG - chr8_4:15004952-15004971 Msa1315530:intron 20.0%
!!! CAACTTGATGATTATATATA+AGG + chr8_4:15005187-15005206 None:intergenic 20.0%
!! AAGAAAGTTACATAAGTAAT+TGG - chr8_4:15005269-15005288 Msa1315530:intron 20.0%
!!! ACTACTTTTTACAATTTCTA+TGG + chr8_4:15005470-15005489 None:intergenic 20.0%
!!! AATTTTACGTGTAATTTCAT+AGG + chr8_4:15005625-15005644 None:intergenic 20.0%
!!! TGAAATTACACGTAAAATTT+TGG - chr8_4:15005626-15005645 Msa1315530:intron 20.0%
!!! AAAATTTAAGATACTCACTT+GGG - chr8_4:15005840-15005859 Msa1315530:intron 20.0%
!!! AAATTTTCTATCTTAGCTTT+TGG - chr8_4:15006381-15006400 Msa1315530:intron 20.0%
!!! CATGAATTGACTTAAAAATA+TGG - chr8_4:15006637-15006656 Msa1315530:three_prime_UTR 20.0%
!!! AAATTTTCAATTACCACTTT+TGG + chr8_4:15006664-15006683 None:intergenic 20.0%
!! TAGATAAAAGATATTTACGT+TGG + chr8_4:15006862-15006881 None:intergenic 20.0%
!!! AACGTAAATATCTTTTATCT+AGG - chr8_4:15006861-15006880 Msa1315530:CDS 20.0%
!!! ACGTAAATATCTTTTATCTA+GGG - chr8_4:15006862-15006881 Msa1315530:CDS 20.0%
!!! AAAAAAAGTTTTTTGTTTGG+CGG + chr8_4:15007013-15007032 None:intergenic 20.0%
!!! TTATCCTTTTGGATTTAATT+TGG + chr8_4:15007230-15007249 None:intergenic 20.0%
!!! TGATACTTATTTTATCCTTT+TGG + chr8_4:15007241-15007260 None:intergenic 20.0%
!!! TTATGCTTTTGGATTTATTT+TGG + chr8_4:15007332-15007351 None:intergenic 20.0%
!!! TTATGCTTTTGAATTTATCT+TGG + chr8_4:15007381-15007400 None:intergenic 20.0%
!! TCATCTAAGTTATGAATATA+TGG - chr8_4:15007470-15007489 Msa1315530:intron 20.0%
!! AATATGTTTGATAAAAGTAG+GGG + chr8_4:15007714-15007733 None:intergenic 20.0%
!!! TTTTTTTAGCAAATAGTAGT+GGG + chr8_4:15008093-15008112 None:intergenic 20.0%
!!! TTTTTTTTAGCAAATAGTAG+TGG + chr8_4:15008094-15008113 None:intergenic 20.0%
!!! CGGTTGATATATATATATAT+AGG - chr8_4:15008231-15008250 Msa1315530:intron 20.0%
!! GTAAATTAGCAAAATGTATT+CGG + chr8_4:15008627-15008646 None:intergenic 20.0%
!!! TTTGAATTTTGAATTGAAGA+GGG + chr8_4:15008914-15008933 None:intergenic 20.0%
!!! ATTTGAATTTTGAATTGAAG+AGG + chr8_4:15008915-15008934 None:intergenic 20.0%
!! AGAATAAAGGAATAAATAGT+GGG + chr8_4:15009236-15009255 None:intergenic 20.0%
!! AAGAATAAAGGAATAAATAG+TGG + chr8_4:15009237-15009256 None:intergenic 20.0%
!!! AAATGCAACTTTTTTATTGT+AGG - chr8_4:15009661-15009680 Msa1315530:intron 20.0%
!! ATTTATGCAAAAAAAAGGAA+GGG + chr8_4:15010076-15010095 None:intergenic 20.0%
!! AATTTATGCAAAAAAAAGGA+AGG + chr8_4:15010077-15010096 None:intergenic 20.0%
!!! CTTTTTTTTGCATAAATTCA+GGG - chr8_4:15010079-15010098 Msa1315530:intron 20.0%
!!! GAAACATTGATTGATTTTAA+TGG - chr8_4:15010121-15010140 Msa1315530:intron 20.0%
!! AATTCTAAACACAAACAAAT+AGG - chr8_4:15010296-15010315 Msa1315530:intron 20.0%
!!! AGAAGTAATTTGCTAATTTT+TGG - chr8_4:15010505-15010524 Msa1315530:intron 20.0%
!! ATTGAAACAAAATGAATGAA+AGG + chr8_4:15010788-15010807 None:intergenic 20.0%
!!! TTTCAGAGAAAATAAACTTT+TGG + chr8_4:15010866-15010885 None:intergenic 20.0%
!!! AATTAAATGGTTTTATGATG+TGG - chr8_4:15011056-15011075 Msa1315530:intron 20.0%
!! TTCAGTAATATACAAATTTC+AGG - chr8_4:15011157-15011176 Msa1315530:intron 20.0%
!!! TAATATACAAATTTCAGGTT+AGG - chr8_4:15011162-15011181 Msa1315530:intron 20.0%
!!! TATATCAAAGATTTTGTAGA+AGG - chr8_4:15011308-15011327 Msa1315530:intron 20.0%
!! TGATTCATCTCTATTAATAA+TGG - chr8_4:15011431-15011450 Msa1315530:intron 20.0%
!!! GAAAAGAATTTTATCTTTAG+AGG - chr8_4:15011652-15011671 Msa1315530:intron 20.0%
!! CACTATTAATTAATAACCAA+GGG + chr8_4:15011835-15011854 None:intergenic 20.0%
!! TCACTATTAATTAATAACCA+AGG + chr8_4:15011836-15011855 None:intergenic 20.0%
!!! AGACTTTACTATTTTTCATT+TGG - chr8_4:15011980-15011999 Msa1315530:intron 20.0%
!!! GACTTTACTATTTTTCATTT+GGG - chr8_4:15011981-15012000 Msa1315530:intron 20.0%
!!! CTAAATGATATAATTTTTGC+CGG - chr8_4:15012119-15012138 Msa1315530:intron 20.0%
!! AAATGAATATAATCATAGTC+CGG + chr8_4:15012141-15012160 None:intergenic 20.0%
!! TATTCAATATATAGACCATA+AGG - chr8_4:15012800-15012819 Msa1315530:intron 20.0%
!! TATAAAACAAAGTTACCTTA+TGG + chr8_4:15012818-15012837 None:intergenic 20.0%
!! TTATACTTAAATGTCCAAAA+AGG + chr8_4:15012921-15012940 None:intergenic 20.0%
!!! TTAAATTTGATAGCTATATC+AGG + chr8_4:15013222-15013241 None:intergenic 20.0%
!! TATGAACTATTAATATCCAA+AGG + chr8_4:15013372-15013391 None:intergenic 20.0%
!!! TTATTATAATCGAATTTTGC+AGG - chr8_4:15013408-15013427 Msa1315530:CDS 20.0%
!! CATCTTTGTTATCTTCATTA+TGG - chr8_4:15003429-15003448 Msa1315530:three_prime_UTR 25.0%
! ATCAAAACATTCAACAAAAG+AGG + chr8_4:15003552-15003571 None:intergenic 25.0%
! CGAAATAATAATATTGTTGC+AGG + chr8_4:15003633-15003652 None:intergenic 25.0%
!! GTATGTAGAGAATATTGATT+TGG - chr8_4:15003871-15003890 Msa1315530:three_prime_UTR 25.0%
! ACTTAATCTTTAGTGTGAAT+TGG + chr8_4:15004054-15004073 None:intergenic 25.0%
! TATAATTCATGCTATCCATT+TGG - chr8_4:15004079-15004098 Msa1315530:intron 25.0%
! AAACGGATAAAATAACCAAA+TGG + chr8_4:15004097-15004116 None:intergenic 25.0%
!! AATCATTGCAGAGTATTAAA+CGG + chr8_4:15004114-15004133 None:intergenic 25.0%
! ATTCCTATATCAATCTACAT+GGG + chr8_4:15004218-15004237 None:intergenic 25.0%
! TCAAAATGTATAGAATGGAT+TGG - chr8_4:15004376-15004395 Msa1315530:intron 25.0%
!! AATGTAACTTTTGTGAACAT+CGG + chr8_4:15005214-15005233 None:intergenic 25.0%
! GTTACATAAGTAATTGGATA+AGG - chr8_4:15005275-15005294 Msa1315530:intron 25.0%
! TAAGTAATTGGATAAGGATT+TGG - chr8_4:15005281-15005300 Msa1315530:intron 25.0%
! TACTAGATCTTAATCACTTT+CGG - chr8_4:15005551-15005570 Msa1315530:intron 25.0%
! AGTTTGAACATTTCGAAATT+TGG + chr8_4:15005674-15005693 None:intergenic 25.0%
! AAGAATACATTCATGTAAAG+TGG - chr8_4:15005708-15005727 Msa1315530:intron 25.0%
! AAAGTGGAATACAAGTATAT+TGG - chr8_4:15005724-15005743 Msa1315530:intron 25.0%
!! GAAAATTTAAGATACTCACT+TGG - chr8_4:15005839-15005858 Msa1315530:intron 25.0%
! AAGTTATTTGAAAATGAGCT+TGG - chr8_4:15005870-15005889 Msa1315530:intron 25.0%
!!! CAATATTATTTTTTTGGTGG+TGG + chr8_4:15006117-15006136 None:intergenic 25.0%
!! GCTAAGATAGAAAATTTTGA+GGG + chr8_4:15006378-15006397 None:intergenic 25.0%
!! AGCTAAGATAGAAAATTTTG+AGG + chr8_4:15006379-15006398 None:intergenic 25.0%
!! TTCATATGAGTTTGCTTAAA+AGG + chr8_4:15006412-15006431 None:intergenic 25.0%
! TTAAAAATATGGACCAAAAG+TGG - chr8_4:15006648-15006667 Msa1315530:exon 25.0%
! TTATATGAACAAAAAGTCGA+AGG - chr8_4:15006682-15006701 Msa1315530:CDS 25.0%
!! AAATATCTTTTATCTAGGGA+TGG - chr8_4:15006866-15006885 Msa1315530:CDS 25.0%
!!! AAAAAAGTTTTTTGTTTGGC+GGG + chr8_4:15007012-15007031 None:intergenic 25.0%
!! TGTAACAATCAAGTTGTAAA+AGG + chr8_4:15007042-15007061 None:intergenic 25.0%
!!! TTTGGATTTAATTTGGTTGT+TGG + chr8_4:15007223-15007242 None:intergenic 25.0%
! ACAACCAAATTAAATCCAAA+AGG - chr8_4:15007223-15007242 Msa1315530:intron 25.0%
!! TTTGGTTGTTGGATTTATTT+TGG + chr8_4:15007212-15007231 None:intergenic 25.0%
!!! TTTGGATTTATTTTGGTTGT+TGG + chr8_4:15007325-15007344 None:intergenic 25.0%
!!! TGAGACTTTTTTTATGCTTT+TGG + chr8_4:15007343-15007362 None:intergenic 25.0%
! CTAATTTGAAAGTCATAGTA+TGG - chr8_4:15007754-15007773 Msa1315530:intron 25.0%
!!! AGTATGGTTTTGTACAAAAA+AGG - chr8_4:15007770-15007789 Msa1315530:intron 25.0%
! GTAAACTCAATAATTAGAGA+CGG + chr8_4:15007889-15007908 None:intergenic 25.0%
!! CAAATATTGCAAAAGTTTTC+TGG + chr8_4:15007911-15007930 None:intergenic 25.0%
! TTTGTTAGGATATATTTGGA+CGG - chr8_4:15008211-15008230 Msa1315530:intron 25.0%
!! ACACCAACTAATTTTTATGA+AGG - chr8_4:15008322-15008341 Msa1315530:intron 25.0%
! ACACCTTCATAAAAATTAGT+TGG + chr8_4:15008328-15008347 None:intergenic 25.0%
! GCAAAGTTATAACTAAAATG+TGG - chr8_4:15008354-15008373 Msa1315530:intron 25.0%
! AACAACAAAGAAAACAACAT+AGG - chr8_4:15008680-15008699 Msa1315530:intron 25.0%
! CTTAAAGCTACAAAGAATAA+AGG + chr8_4:15009249-15009268 None:intergenic 25.0%
!! AAGAATTCCAATTCCATTTT+CGG - chr8_4:15009405-15009424 Msa1315530:intron 25.0%
!!! ATTTTGTTGTTTTGGTCATT+TGG - chr8_4:15009757-15009776 Msa1315530:intron 25.0%
!! TTGAATTTCTGAAAAAGCAA+TGG + chr8_4:15010029-15010048 None:intergenic 25.0%
!!! TGCTTTTTCAGAAATTCAAA+AGG - chr8_4:15010030-15010049 Msa1315530:intron 25.0%
!!! GCTTTTTCAGAAATTCAAAA+GGG - chr8_4:15010031-15010050 Msa1315530:intron 25.0%
! CCTGAATTTATGCAAAAAAA+AGG + chr8_4:15010081-15010100 None:intergenic 25.0%
!!! CCTTTTTTTTGCATAAATTC+AGG - chr8_4:15010078-15010097 Msa1315530:intron 25.0%
!! AAAACTTAAGTCTCTTTTTG+AGG - chr8_4:15010352-15010371 Msa1315530:intron 25.0%
!! AAACTTAAGTCTCTTTTTGA+GGG - chr8_4:15010353-15010372 Msa1315530:intron 25.0%
! AGACTAGATAATTCTTTCTT+TGG - chr8_4:15010591-15010610 Msa1315530:intron 25.0%
! GATAATTCTTTCTTTGGTAA+AGG - chr8_4:15010597-15010616 Msa1315530:intron 25.0%
!!! TCTCTGAAATTGTTTAATGT+AGG - chr8_4:15010877-15010896 Msa1315530:intron 25.0%
!! TTTTCATTGTAGTTGATCAA+AGG - chr8_4:15011219-15011238 Msa1315530:intron 25.0%
! AAATCTTTGATATAGCATCA+TGG + chr8_4:15011302-15011321 None:intergenic 25.0%
! TGCGAAGAAAATTTAGAAAA+TGG + chr8_4:15011334-15011353 None:intergenic 25.0%
!! TTTCTAAATTTTCTTCGCAT+TGG - chr8_4:15011335-15011354 Msa1315530:intron 25.0%
! TATTTGTCTCTCTTTACTAT+AGG - chr8_4:15011918-15011937 Msa1315530:intron 25.0%
! ATTTGTCTCTCTTTACTATA+GGG - chr8_4:15011919-15011938 Msa1315530:intron 25.0%
! CACAAATATGGTTAGAAAAT+AGG + chr8_4:15012068-15012087 None:intergenic 25.0%
!! CTATTTTCTAACCATATTTG+TGG - chr8_4:15012066-15012085 Msa1315530:intron 25.0%
!! ACACTTAACATTTCTAAGAA+CGG - chr8_4:15012332-15012351 Msa1315530:intron 25.0%
!!! CTGTTTTTAGTTTAAGTTGT+TGG - chr8_4:15012484-15012503 Msa1315530:intron 25.0%
! TACCATAACTCTAACAAATA+GGG + chr8_4:15012517-15012536 None:intergenic 25.0%
! ATACCATAACTCTAACAAAT+AGG + chr8_4:15012518-15012537 None:intergenic 25.0%
! ATAAAAGGCAATGTCAATTT+CGG + chr8_4:15012718-15012737 None:intergenic 25.0%
! AAGAAGAATCAGACAATAAA+AGG + chr8_4:15012733-15012752 None:intergenic 25.0%
! ATACCATGACATAATAACAT+TGG - chr8_4:15012848-15012867 Msa1315530:intron 25.0%
! ATAACATTGGAGATAATTAG+TGG - chr8_4:15012861-15012880 Msa1315530:intron 25.0%
! TAACATTGGAGATAATTAGT+GGG - chr8_4:15012862-15012881 Msa1315530:intron 25.0%
! TACCTATTTGAATTGTTTCA+CGG - chr8_4:15012955-15012974 Msa1315530:CDS 25.0%
!! ATATCAGGTACACATTTTAT+TGG + chr8_4:15013207-15013226 None:intergenic 25.0%
! ACTATTAATATCCAAAGGAA+AGG + chr8_4:15013367-15013386 None:intergenic 25.0%
! TATTTCCTTTCTTACTTTGT+CGG - chr8_4:15013453-15013472 Msa1315530:CDS 25.0%
GGTGACACAAATATAAAGTA+TGG + chr8_4:15003590-15003609 None:intergenic 30.0%
TCTATGTAATTAGTGTAACC+AGG - chr8_4:15003739-15003758 Msa1315530:three_prime_UTR 30.0%
!! TTGATTTGGATAAGAGTACA+TGG - chr8_4:15003885-15003904 Msa1315530:three_prime_UTR 30.0%
ACATGGAATGTGATGATTAA+TGG - chr8_4:15003902-15003921 Msa1315530:three_prime_UTR 30.0%
AATGTGATGATTAATGGTGA+TGG - chr8_4:15003908-15003927 Msa1315530:three_prime_UTR 30.0%
TACTATTAAGTTCCATGATC+AGG - chr8_4:15004138-15004157 Msa1315530:intron 30.0%
TTCCTATATCAATCTACATG+GGG + chr8_4:15004217-15004236 None:intergenic 30.0%
GATTCCTATATCAATCTACA+TGG + chr8_4:15004219-15004238 None:intergenic 30.0%
TGTAGATTGATATAGGAATC+TGG - chr8_4:15004219-15004238 Msa1315530:intron 30.0%
!! CAAGATTGTGTTTTTACAGT+TGG - chr8_4:15004562-15004581 Msa1315530:intron 30.0%
! TGAGTTTTCAATGTATCACA+TGG + chr8_4:15004671-15004690 None:intergenic 30.0%
GAACTTGAACTATTCAGTTA+TGG + chr8_4:15004717-15004736 None:intergenic 30.0%
!! GTTCAAGTTCTAACACATTT+TGG - chr8_4:15004727-15004746 Msa1315530:intron 30.0%
!! TTCAAAGGGAGTATTTGATT+TGG - chr8_4:15004966-15004985 Msa1315530:intron 30.0%
AGCAACTTTCAATAAGTGAT+TGG + chr8_4:15005115-15005134 None:intergenic 30.0%
TTACGTGTAATTTCATAGGA+TGG + chr8_4:15005621-15005640 None:intergenic 30.0%
!! GTAAAATTTTGGAAAGCTCA+AGG - chr8_4:15005637-15005656 Msa1315530:intron 30.0%
ATGTTCAAACTTTCACTTTG+CGG - chr8_4:15005683-15005702 Msa1315530:intron 30.0%
TTGATGAACTTCATCTTTGT+CGG + chr8_4:15005795-15005814 None:intergenic 30.0%
! TTCATAAGCTTTGACTTTGT+TGG + chr8_4:15005822-15005841 None:intergenic 30.0%
!!! TGGTACTTTGTTTTTTTGTG+AGG - chr8_4:15005890-15005909 Msa1315530:intron 30.0%
GACAATGCATAAAATATGCA+AGG - chr8_4:15006072-15006091 Msa1315530:intron 30.0%
! TATGAGTTTGCTTAAAAGGA+GGG + chr8_4:15006408-15006427 None:intergenic 30.0%
! ATATGAGTTTGCTTAAAAGG+AGG + chr8_4:15006409-15006428 None:intergenic 30.0%
! AAGTCGAAGGAAAATTTTAG+CGG - chr8_4:15006695-15006714 Msa1315530:CDS 30.0%
AACTTAGATGATGATTGACT+TGG + chr8_4:15007461-15007480 None:intergenic 30.0%
ATTGTTTCAAACGAGTTAAG+CGG - chr8_4:15007538-15007557 Msa1315530:intron 30.0%
!!! TTGAACTCGCTTTTTATAGT+TGG + chr8_4:15007621-15007640 None:intergenic 30.0%
AAAAGGTCATGTATCATTTG+TGG - chr8_4:15007787-15007806 Msa1315530:intron 30.0%
GAGAATAATAACATGTAGAC+AGG - chr8_4:15007949-15007968 Msa1315530:intron 30.0%
AATAATAACATGTAGACAGG+TGG - chr8_4:15007952-15007971 Msa1315530:intron 30.0%
ATAATAACATGTAGACAGGT+GGG - chr8_4:15007953-15007972 Msa1315530:intron 30.0%
ACAAGAATCAATGAAATAGC+CGG + chr8_4:15008017-15008036 None:intergenic 30.0%
!! ATTGATTCTTGTTTCTGCTA+CGG - chr8_4:15008025-15008044 Msa1315530:intron 30.0%
CTAAAAGACACCTTCATAAA+AGG + chr8_4:15008273-15008292 None:intergenic 30.0%
! TATCCAAGTTGAAAATGTGT+TGG - chr8_4:15008518-15008537 Msa1315530:intron 30.0%
ACAAAGAAAACAACATAGGT+TGG - chr8_4:15008684-15008703 Msa1315530:intron 30.0%
AAAAGGAAAGAAGTTTAGAG+TGG + chr8_4:15009022-15009041 None:intergenic 30.0%
GATAGAAAGTGAGGAAAAAA+AGG + chr8_4:15009039-15009058 None:intergenic 30.0%
GAAAGAAGATAGAGAGAAAA+GGG + chr8_4:15009136-15009155 None:intergenic 30.0%
AGAAAGAAGATAGAGAGAAA+AGG + chr8_4:15009137-15009156 None:intergenic 30.0%
!!! TTATTTTTATGTGATGCAGC+CGG + chr8_4:15009176-15009195 None:intergenic 30.0%
!!! ATAAATAGTGGGTTTTGTAG+AGG + chr8_4:15009225-15009244 None:intergenic 30.0%
ACTCTGAATACGAAATCAAT+CGG - chr8_4:15009332-15009351 Msa1315530:intron 30.0%
AACAAAACCGAAAATGGAAT+TGG + chr8_4:15009415-15009434 None:intergenic 30.0%
TGCAAAAACAAAACCGAAAA+TGG + chr8_4:15009421-15009440 None:intergenic 30.0%
TTATAGACCATCCATTCATT+TGG + chr8_4:15009521-15009540 None:intergenic 30.0%
!! TTGGTCATTTGGTCTTAAAT+TGG - chr8_4:15009768-15009787 Msa1315530:intron 30.0%
! CTCTACTTCCTTTAATTTCT+TGG - chr8_4:15009986-15010005 Msa1315530:intron 30.0%
CACACAAACCAAGAAATTAA+AGG + chr8_4:15009997-15010016 None:intergenic 30.0%
! ATTTCTGAAAAAGCAATGGA+AGG + chr8_4:15010025-15010044 None:intergenic 30.0%
! AAATTCAGGGTATCTATAAG+AGG - chr8_4:15010092-15010111 Msa1315530:intron 30.0%
ATTGGAGAGAAGTTTGATAA+TGG - chr8_4:15010241-15010260 Msa1315530:intron 30.0%
! GAGACTTAAGTTTTCAAACA+GGG + chr8_4:15010346-15010365 None:intergenic 30.0%
! AGAGACTTAAGTTTTCAAAC+AGG + chr8_4:15010347-15010366 None:intergenic 30.0%
CTTCACAAAAGATGCTAATA+GGG + chr8_4:15010636-15010655 None:intergenic 30.0%
ACTTCACAAAAGATGCTAAT+AGG + chr8_4:15010637-15010656 None:intergenic 30.0%
! AGGTTTCGCTTTAAGTTATT+TGG - chr8_4:15010897-15010916 Msa1315530:intron 30.0%
! TCAATTCTTTTCAGTTGTGA+TGG - chr8_4:15010979-15010998 Msa1315530:intron 30.0%
!!! TAAATGGTTTTATGATGTGG+AGG - chr8_4:15011059-15011078 Msa1315530:intron 30.0%
ATAAATTGATCCTGCAACAA+AGG + chr8_4:15011108-15011127 None:intergenic 30.0%
AGAAATGAACCAAAAGACAA+AGG + chr8_4:15011190-15011209 None:intergenic 30.0%
!!! ATCAAAGGTGTGCAATTTTT+TGG - chr8_4:15011234-15011253 Msa1315530:intron 30.0%
GATGTGAATTAGTTACTTGA+TGG - chr8_4:15011723-15011742 Msa1315530:intron 30.0%
ATAGATCAGATCCACAAATA+TGG + chr8_4:15012080-15012099 None:intergenic 30.0%
TTCCAGAATATGTAATGAGT+GGG + chr8_4:15012393-15012412 None:intergenic 30.0%
! CATTACATATTCTGGAAGTA+TGG - chr8_4:15012396-15012415 Msa1315530:intron 30.0%
GATGACATCATTTACTGAAT+TGG + chr8_4:15012541-15012560 None:intergenic 30.0%
CTCTTAATATGATTCTTCGA+AGG - chr8_4:15012565-15012584 Msa1315530:intron 30.0%
TTCATGGACAATTTCTTTAG+TGG + chr8_4:15012662-15012681 None:intergenic 30.0%
ACTAAAGAAATTGTCCATGA+AGG - chr8_4:15012661-15012680 Msa1315530:intron 30.0%
AGCTTCAAAATCTGCAAAAA+TGG + chr8_4:15012758-15012777 None:intergenic 30.0%
!!! GTAACTTTGTTTTATACTCG+AGG - chr8_4:15012822-15012841 Msa1315530:intron 30.0%
TCTCCAATGTTATTATGTCA+TGG + chr8_4:15012854-15012873 None:intergenic 30.0%
!! CATTTGATTTGAGGATAAAG+AGG + chr8_4:15013143-15013162 None:intergenic 30.0%
!! AATGTCACTTGCAAATTTTG+AGG - chr8_4:15013159-15013178 Msa1315530:intron 30.0%
TCTAGTTAAAGCGTATACAT+AGG + chr8_4:15013343-15013362 None:intergenic 30.0%
ATAAACCGACAAAGTAAGAA+AGG + chr8_4:15013461-15013480 None:intergenic 30.0%
!!! CTTTGTCGGTTTATATTTTG+AGG - chr8_4:15013467-15013486 Msa1315530:CDS 30.0%
ATCTTCATTATGGTCCTCTT+TGG - chr8_4:15003439-15003458 Msa1315530:three_prime_UTR 35.0%
CAGAAGAAGAAGATAAAGAG+AGG + chr8_4:15003466-15003485 None:intergenic 35.0%
CTCTCTTTATCTTCTTCTTC+TGG - chr8_4:15003464-15003483 Msa1315530:three_prime_UTR 35.0%
AAGTATGGTGAATGAGTGAT+TGG + chr8_4:15003575-15003594 None:intergenic 35.0%
AATTAGTGTAACCAGGTTTG+TGG - chr8_4:15003746-15003765 Msa1315530:three_prime_UTR 35.0%
AGTGGACAGTATAAGACAAT+AGG - chr8_4:15003783-15003802 Msa1315530:three_prime_UTR 35.0%
GTGGACAGTATAAGACAATA+GGG - chr8_4:15003784-15003803 Msa1315530:three_prime_UTR 35.0%
TGGACAGTATAAGACAATAG+GGG - chr8_4:15003785-15003804 Msa1315530:three_prime_UTR 35.0%
TCTAATCGATGCTCTATATG+TGG + chr8_4:15004183-15004202 None:intergenic 35.0%
TACCCCATGTAGATTGATAT+AGG - chr8_4:15004212-15004231 Msa1315530:intron 35.0%
CAGTTATGGTTACAGAAAGA+GGG + chr8_4:15004703-15004722 None:intergenic 35.0%
TCAGTTATGGTTACAGAAAG+AGG + chr8_4:15004704-15004723 None:intergenic 35.0%
!! ACCCTAAAGTGATGTTGTTT+TGG - chr8_4:15004843-15004862 Msa1315530:intron 35.0%
CCCAAAACAACATCACTTTA+GGG + chr8_4:15004847-15004866 None:intergenic 35.0%
!!! CCCTAAAGTGATGTTGTTTT+GGG - chr8_4:15004844-15004863 Msa1315530:intron 35.0%
!! AGGACATTTTTCGGAAAGTT+GGG + chr8_4:15005167-15005186 None:intergenic 35.0%
!! AAGGACATTTTTCGGAAAGT+TGG + chr8_4:15005168-15005187 None:intergenic 35.0%
AATTGGATAAGGATTTGGCA+AGG - chr8_4:15005286-15005305 Msa1315530:intron 35.0%
!! TGTATCAGTTTCTAGTGTTG+TGG + chr8_4:15005429-15005448 None:intergenic 35.0%
GATCTTAATCACTTTCGGAT+TGG - chr8_4:15005556-15005575 Msa1315530:intron 35.0%
! GAAAGCTCAAGGTTTAACTT+TGG - chr8_4:15005648-15005667 Msa1315530:intron 35.0%
TTAAGATACTCACTTGGGTT+TGG - chr8_4:15005845-15005864 Msa1315530:intron 35.0%
TGAAGGTAGATGTACAAAAC+TGG - chr8_4:15005946-15005965 Msa1315530:intron 35.0%
TGAGCTTAGTTCAGTTAGTA+TGG - chr8_4:15006050-15006069 Msa1315530:intron 35.0%
TGCATAAAATATGCAAGGTC+CGG - chr8_4:15006077-15006096 Msa1315530:intron 35.0%
!!! ATTATTTTTTTGGTGGTGGC+CGG + chr8_4:15006113-15006132 None:intergenic 35.0%
AATTATGTTACGACGACAAC+AGG + chr8_4:15007521-15007540 None:intergenic 35.0%
TTGTTTCAAACGAGTTAAGC+GGG - chr8_4:15007539-15007558 Msa1315530:intron 35.0%
!!! TTTTTATAGTTGGCTCGACT+CGG + chr8_4:15007611-15007630 None:intergenic 35.0%
ATGTTTGATAAAAGTAGGGG+TGG + chr8_4:15007711-15007730 None:intergenic 35.0%
TAATAACATGTAGACAGGTG+GGG - chr8_4:15007954-15007973 Msa1315530:intron 35.0%
!! ATGCATTTTAGCGCAATTAC+CGG - chr8_4:15007995-15008014 Msa1315530:intron 35.0%
! TAGTAGTGGGAAATGGAAAT+GGG + chr8_4:15008080-15008099 None:intergenic 35.0%
! ATAGTAGTGGGAAATGGAAA+TGG + chr8_4:15008081-15008100 None:intergenic 35.0%
! TAGCAAATAGTAGTGGGAAA+TGG + chr8_4:15008087-15008106 None:intergenic 35.0%
! CTAGAAGACACCTTTTATGA+AGG - chr8_4:15008260-15008279 Msa1315530:intron 35.0%
TTGCTAAAAGACACCTTCAT+GGG - chr8_4:15008399-15008418 Msa1315530:intron 35.0%
! CAACCAACACATTTTCAACT+TGG + chr8_4:15008524-15008543 None:intergenic 35.0%
! AATGATGATGTGACATGTAG+TGG + chr8_4:15008817-15008836 None:intergenic 35.0%
GGATATGAGAAAAAGTAGGA+GGG + chr8_4:15008963-15008982 None:intergenic 35.0%
GTTGGGATATGAGAAAAAGT+AGG + chr8_4:15008967-15008986 None:intergenic 35.0%
TTAGAGTGGATGAGAGATAA+AGG + chr8_4:15009008-15009027 None:intergenic 35.0%
AGAAAGTTATGTTGAGTGTG+TGG + chr8_4:15009065-15009084 None:intergenic 35.0%
ATAGAGAGAAAAGGGTTTCA+TGG + chr8_4:15009128-15009147 None:intergenic 35.0%
TCCGAAACAGTTGAAATCAA+GGG + chr8_4:15009284-15009303 None:intergenic 35.0%
ATCCGAAACAGTTGAAATCA+AGG + chr8_4:15009285-15009304 None:intergenic 35.0%
TTCGTATTCAGAGTTGCATT+TGG + chr8_4:15009326-15009345 None:intergenic 35.0%
CTATTCTCTTACAATCTCTC+TGG - chr8_4:15009451-15009470 Msa1315530:intron 35.0%
GATACCACAGGAAAAAAATG+AGG - chr8_4:15009490-15009509 Msa1315530:intron 35.0%
CAGAAATTCAAAAGGGATGA+AGG - chr8_4:15010038-15010057 Msa1315530:intron 35.0%
! AGGGTATCTATAAGAGGTAA+TGG - chr8_4:15010098-15010117 Msa1315530:intron 35.0%
GGGTATCTATAAGAGGTAAT+GGG - chr8_4:15010099-15010118 Msa1315530:intron 35.0%
AAACACAAACAAATAGGCAC+AGG - chr8_4:15010302-15010321 Msa1315530:intron 35.0%
TGTTGAGTTACTCTTTGTGT+AGG + chr8_4:15010442-15010461 None:intergenic 35.0%
!! TCTTTTCAGTTGTGATGGAA+AGG - chr8_4:15010984-15011003 Msa1315530:intron 35.0%
!! ATTTTTGTGATTTGCCTTGC+TGG - chr8_4:15011263-15011282 Msa1315530:intron 35.0%
GATTAAGCATAAAACCAGCA+AGG + chr8_4:15011280-15011299 None:intergenic 35.0%
!! TTGAAGTACTGCTTGATGTT+TGG - chr8_4:15011699-15011718 Msa1315530:intron 35.0%
!! GCTTTTCTTTTTTGCAAGAG+AGG - chr8_4:15012003-15012022 Msa1315530:intron 35.0%
CTTCCAGAATATGTAATGAG+TGG + chr8_4:15012394-15012413 None:intergenic 35.0%
! GTCCCTATTTGTTAGAGTTA+TGG - chr8_4:15012512-15012531 Msa1315530:intron 35.0%
TTGGAGATAATTAGTGGGAA+AGG - chr8_4:15012867-15012886 Msa1315530:intron 35.0%
TGGAGATAATTAGTGGGAAA+GGG - chr8_4:15012868-15012887 Msa1315530:intron 35.0%
!! AAAGGTTGAGAGAGTGTTAT+GGG + chr8_4:15012903-15012922 None:intergenic 35.0%
!! AAAAGGTTGAGAGAGTGTTA+TGG + chr8_4:15012904-15012923 None:intergenic 35.0%
! TAACACTCTCTCAACCTTTT+TGG - chr8_4:15012904-15012923 Msa1315530:intron 35.0%
AGCCGTGAAACAATTCAAAT+AGG + chr8_4:15012960-15012979 None:intergenic 35.0%
TTGAATTGTTTCACGGCTTT+AGG - chr8_4:15012962-15012981 Msa1315530:CDS 35.0%
TGTGTATCTAGTAGTTGCAA+TGG + chr8_4:15013014-15013033 None:intergenic 35.0%
!! TGCAAGTGACATTTGATTTG+AGG + chr8_4:15013152-15013171 None:intergenic 35.0%
GAAGCTAAAACGATATTCAG+AGG + chr8_4:15013274-15013293 None:intergenic 35.0%
GTTCATGAGAAACGAACATT+TGG + chr8_4:15013321-15013340 None:intergenic 35.0%
TTTAACTAGAGCCTTTCCTT+TGG - chr8_4:15013353-15013372 Msa1315530:CDS 35.0%
AGATAAAGAGAGGACCAAAG+AGG + chr8_4:15003456-15003475 None:intergenic 40.0%
TTATCTTCTTCTTCTGGCCA+TGG - chr8_4:15003470-15003489 Msa1315530:three_prime_UTR 40.0%
TTAGAAGATGTGAGTTGTGC+TGG + chr8_4:15003509-15003528 None:intergenic 40.0%
GCACAACTCACATCTTCTAA+AGG - chr8_4:15003509-15003528 Msa1315530:three_prime_UTR 40.0%
ACAGTATAAGACAATAGGGG+AGG - chr8_4:15003788-15003807 Msa1315530:three_prime_UTR 40.0%
AGAGTCTCAAGAGATTTCTG+TGG - chr8_4:15003829-15003848 Msa1315530:three_prime_UTR 40.0%
TCTGTGGTGTATGTGAAGAA+AGG - chr8_4:15003845-15003864 Msa1315530:three_prime_UTR 40.0%
CTGTGGTGTATGTGAAGAAA+GGG - chr8_4:15003846-15003865 Msa1315530:three_prime_UTR 40.0%
TGTGGTGTATGTGAAGAAAG+GGG - chr8_4:15003847-15003866 Msa1315530:three_prime_UTR 40.0%
ATGTAAACACGTACCGAAAG+TGG + chr8_4:15003999-15004018 None:intergenic 40.0%
!! GCTCTATATGTGGCTTTGTT+GGG + chr8_4:15004173-15004192 None:intergenic 40.0%
!! TGCTCTATATGTGGCTTTGT+TGG + chr8_4:15004174-15004193 None:intergenic 40.0%
ACGAACTCTCAACAAACTGA+GGG + chr8_4:15004441-15004460 None:intergenic 40.0%
AACGAACTCTCAACAAACTG+AGG + chr8_4:15004442-15004461 None:intergenic 40.0%
GCCCAAAACAACATCACTTT+AGG + chr8_4:15004848-15004867 None:intergenic 40.0%
TAAGTCTCCGCATTGCTTAT+AGG - chr8_4:15005139-15005158 Msa1315530:intron 40.0%
!! GACATTTTTCGGAAAGTTGG+GGG + chr8_4:15005165-15005184 None:intergenic 40.0%
!! GGACATTTTTCGGAAAGTTG+GGG + chr8_4:15005166-15005185 None:intergenic 40.0%
ATAAGGATTTGGCAAGGAGA+GGG - chr8_4:15005292-15005311 Msa1315530:intron 40.0%
ATAGTGCAAGCTCTTCTAGA+GGG + chr8_4:15005321-15005340 None:intergenic 40.0%
GCTCAATTGAAGATGCTAGT+TGG + chr8_4:15005597-15005616 None:intergenic 40.0%
! AAAGTTCTGGCGATTTGTGA+AGG - chr8_4:15005929-15005948 Msa1315530:intron 40.0%
GCATAAAATATGCAAGGTCC+GGG - chr8_4:15006078-15006097 Msa1315530:intron 40.0%
CATAAAATATGCAAGGTCCG+GGG - chr8_4:15006079-15006098 Msa1315530:intron 40.0%
!!! TTATTTTTTTGGTGGTGGCC+GGG + chr8_4:15006112-15006131 None:intergenic 40.0%
TTTATCTAGGGATGGCAAAG+CGG - chr8_4:15006874-15006893 Msa1315530:CDS 40.0%
!!! CTCGGTCACTAATTTTGACT+CGG + chr8_4:15006935-15006954 None:intergenic 40.0%
TAAAAGTAGGGGTGGCAAAA+CGG + chr8_4:15007703-15007722 None:intergenic 40.0%
GGTCATGTATCATTTGTGGT+TGG - chr8_4:15007791-15007810 Msa1315530:intron 40.0%
!! ATAATTAGAGACGGATTGCG+TGG + chr8_4:15007880-15007899 None:intergenic 40.0%
! AATGGCAAGTTGAGAATAGC+AGG + chr8_4:15008055-15008074 None:intergenic 40.0%
AATGTGGAAATCACACCTTG+AGG - chr8_4:15008370-15008389 Msa1315530:intron 40.0%
! TTTTAGCAAGTCACACCTCA+AGG + chr8_4:15008388-15008407 None:intergenic 40.0%
CTTGCTAAAAGACACCTTCA+TGG - chr8_4:15008398-15008417 Msa1315530:intron 40.0%
CAGAGAAAGAAGTGAGTCTA+AGG - chr8_4:15008557-15008576 Msa1315530:intron 40.0%
AGAAGTGAGTCTAAGGAATG+AGG - chr8_4:15008564-15008583 Msa1315530:intron 40.0%
GAAGTGAGTCTAAGGAATGA+GGG - chr8_4:15008565-15008584 Msa1315530:intron 40.0%
GGGATATGAGAAAAAGTAGG+AGG + chr8_4:15008964-15008983 None:intergenic 40.0%
AGAGAAAAGGGTTTCATGGA+GGG + chr8_4:15009124-15009143 None:intergenic 40.0%
TCTTCATTTCCGATCAACTC+CGG - chr8_4:15009154-15009173 Msa1315530:intron 40.0%
CGAAACAGTTGAAATCAAGG+GGG + chr8_4:15009282-15009301 None:intergenic 40.0%
CCGAAACAGTTGAAATCAAG+GGG + chr8_4:15009283-15009302 None:intergenic 40.0%
CCCCTTGATTTCAACTGTTT+CGG - chr8_4:15009280-15009299 Msa1315530:intron 40.0%
! TACAAAGAAGCACACGACAA+CGG - chr8_4:15009375-15009394 Msa1315530:intron 40.0%
! TTTTTCCAGAACGATACCAC+AGG - chr8_4:15009478-15009497 Msa1315530:intron 40.0%
! TTTTTCCTGTGGTATCGTTC+TGG + chr8_4:15009486-15009505 None:intergenic 40.0%
!!! GTTGCCTCATTTTTTTCCTG+TGG + chr8_4:15009497-15009516 None:intergenic 40.0%
ATGAGGCAACTCCAAATGAA+TGG - chr8_4:15009507-15009526 Msa1315530:intron 40.0%
GAATGGATGGTCTATAACTC+AGG - chr8_4:15009524-15009543 Msa1315530:intron 40.0%
TGAGCACTCACATAGTGTTT+AGG - chr8_4:15009874-15009893 Msa1315530:intron 40.0%
GAGCACTCACATAGTGTTTA+GGG - chr8_4:15009875-15009894 Msa1315530:intron 40.0%
CATCTCATAACTACGTGAGA+AGG + chr8_4:15009959-15009978 None:intergenic 40.0%
! CTGCACTTGGTAACAACAAA+AGG + chr8_4:15010181-15010200 None:intergenic 40.0%
!!! CTTTTGTTGTTACCAAGTGC+AGG - chr8_4:15010179-15010198 Msa1315530:intron 40.0%
!! TATGTTGATGAGTGCTGAAG+AGG - chr8_4:15010271-15010290 Msa1315530:intron 40.0%
AGTTACTCTTTGTGTAGGAC+AGG + chr8_4:15010437-15010456 None:intergenic 40.0%
!! GCATCTTTTGTGAAGTGCTA+AGG - chr8_4:15010641-15010660 Msa1315530:intron 40.0%
! ACTACTAGCTTATGCATGTG+AGG - chr8_4:15011134-15011153 Msa1315530:intron 40.0%
! GGTTAGGTTCCTTTGTCTTT+TGG - chr8_4:15011178-15011197 Msa1315530:intron 40.0%
GGGTCTAATATGATACTGTG+CGG - chr8_4:15011939-15011958 Msa1315530:intron 40.0%
GTCAGTAGTGTGTCAACATA+TGG - chr8_4:15012227-15012246 Msa1315530:intron 40.0%
GACCCACTCATTACATATTC+TGG - chr8_4:15012388-15012407 Msa1315530:intron 40.0%
GGCAACACTAAAATCCTTCA+TGG + chr8_4:15012678-15012697 None:intergenic 40.0%
! GTTGCCTTCAAGTTACCTTA+TGG - chr8_4:15012692-15012711 Msa1315530:intron 40.0%
CAATGTCAATTTCGGCCATA+AGG + chr8_4:15012710-15012729 None:intergenic 40.0%
GGAGATAATTAGTGGGAAAG+GGG - chr8_4:15012869-15012888 Msa1315530:intron 40.0%
!! TTGTTTCACGGCTTTAGGAT+TGG - chr8_4:15012967-15012986 Msa1315530:CDS 40.0%
GCCTTTCTTCTCAAGTCATA+CGG - chr8_4:15013048-15013067 Msa1315530:intron 40.0%
ACCGTATGACTTGAGAAGAA+AGG + chr8_4:15013052-15013071 None:intergenic 40.0%
TACATGTGGGGTTATTTGTG+TGG - chr8_4:15013075-15013094 Msa1315530:intron 40.0%
TCCGCGATTTATACTGGTAA+AGG - chr8_4:15013102-15013121 Msa1315530:intron 40.0%
CCCTTTACCAGTATAAATCG+CGG + chr8_4:15013106-15013125 None:intergenic 40.0%
CCGCGATTTATACTGGTAAA+GGG - chr8_4:15013103-15013122 Msa1315530:intron 40.0%
GGTACAAGTAGAGGTGATAG+TGG + chr8_4:15003611-15003630 None:intergenic 45.0%
TTGTTGCAGGGTACAAGTAG+AGG + chr8_4:15003620-15003639 None:intergenic 45.0%
TAGTGTAACCAGGTTTGTGG+TGG - chr8_4:15003749-15003768 Msa1315530:three_prime_UTR 45.0%
!! AATAGGGGAGGTGTTGAAGT+TGG - chr8_4:15003800-15003819 Msa1315530:three_prime_UTR 45.0%
ATGACAGAAACCGTCGTATC+CGG - chr8_4:15003932-15003951 Msa1315530:intron 45.0%
TAAACACGTACCGAAAGTGG+CGG + chr8_4:15003996-15004015 None:intergenic 45.0%
GGGACTTATGAACCTGATCA+TGG + chr8_4:15004153-15004172 None:intergenic 45.0%
CAACAAACTGAGGGTAAGTG+TGG + chr8_4:15004432-15004451 None:intergenic 45.0%
ATGGTTACAGAAAGAGGGAG+AGG + chr8_4:15004698-15004717 None:intergenic 45.0%
!!! ATGTTGTTTTGGGCAGAAGC+TGG - chr8_4:15004854-15004873 Msa1315530:intron 45.0%
GAAGCTGGAGTAGAATCTTG+TGG - chr8_4:15004869-15004888 Msa1315530:intron 45.0%
GATAAGGATTTGGCAAGGAG+AGG - chr8_4:15005291-15005310 Msa1315530:intron 45.0%
GATAGTGCAAGCTCTTCTAG+AGG + chr8_4:15005322-15005341 None:intergenic 45.0%
CTAACTGAACTAAGCTCACG+TGG + chr8_4:15006048-15006067 None:intergenic 45.0%
!!! TATTTTTTTGGTGGTGGCCG+GGG + chr8_4:15006111-15006130 None:intergenic 45.0%
TTATCTAGGGATGGCAAAGC+GGG - chr8_4:15006875-15006894 Msa1315530:CDS 45.0%
!!! GTTTTTAGCGGGCTTAGATG+AGG + chr8_4:15006909-15006928 None:intergenic 45.0%
!!! TTGACTCGGCTCGTTTTTAG+CGG + chr8_4:15006921-15006940 None:intergenic 45.0%
!!! AAGTTTTTTGTTTGGCGGGC+CGG + chr8_4:15007008-15007027 None:intergenic 45.0%
TATGTTACGACGACAACAGG+AGG + chr8_4:15007518-15007537 None:intergenic 45.0%
!!! TTTGGCTCGCTATTTTTGGC+GGG + chr8_4:15007657-15007676 None:intergenic 45.0%
!!! GTTTGGCTCGCTATTTTTGG+CGG + chr8_4:15007658-15007677 None:intergenic 45.0%
GCCAAAAATAGCGAGCCAAA+CGG - chr8_4:15007657-15007676 Msa1315530:intron 45.0%
CCAAAAATAGCGAGCCAAAC+GGG - chr8_4:15007658-15007677 Msa1315530:intron 45.0%
AAAAGTAGGGGTGGCAAAAC+GGG + chr8_4:15007702-15007721 None:intergenic 45.0%
GTGGGGAACAAAGAACCAAA+TGG - chr8_4:15007971-15007990 Msa1315530:intron 45.0%
GCGCTAAAATGCATGCCATT+TGG + chr8_4:15007989-15008008 None:intergenic 45.0%
GGGAAATGGAAATGGGCAAA+TGG + chr8_4:15008073-15008092 None:intergenic 45.0%
CTAAAAGACACCTTCATGGG+TGG - chr8_4:15008402-15008421 Msa1315530:intron 45.0%
ATGTGACATGTAGTGGCTTG+AGG + chr8_4:15008810-15008829 None:intergenic 45.0%
GTGTGGTGAGATAGAAAGTG+AGG + chr8_4:15009048-15009067 None:intergenic 45.0%
CTTTCTTCCTCACACTCACT+CGG - chr8_4:15009085-15009104 Msa1315530:intron 45.0%
AAAGAAACCGAGTGAGTGTG+AGG + chr8_4:15009095-15009114 None:intergenic 45.0%
AAAAGGGTTTCATGGAGGGA+GGG + chr8_4:15009120-15009139 None:intergenic 45.0%
GAGAGAAAAGGGTTTCATGG+AGG + chr8_4:15009125-15009144 None:intergenic 45.0%
! TGAGGAGAGAAAGATGATGG+TGG + chr8_4:15009201-15009220 None:intergenic 45.0%
GGATGAGGAGAGAAAGATGA+TGG + chr8_4:15009204-15009223 None:intergenic 45.0%
!! AGTGGGTTTTGTAGAGGATG+AGG + chr8_4:15009219-15009238 None:intergenic 45.0%
GGCAACTCCAAATGAATGGA+TGG - chr8_4:15009511-15009530 Msa1315530:intron 45.0%
TCGGCCATAAGGTAACTTGA+AGG + chr8_4:15012699-15012718 None:intergenic 45.0%
AGTCATACGGTGCATACATG+TGG - chr8_4:15013061-15013080 Msa1315530:intron 45.0%
GTCATACGGTGCATACATGT+GGG - chr8_4:15013062-15013081 Msa1315530:intron 45.0%
TCATACGGTGCATACATGTG+GGG - chr8_4:15013063-15013082 Msa1315530:intron 45.0%
ATGTGGGGTTATTTGTGTGG+AGG - chr8_4:15013078-15013097 Msa1315530:intron 45.0%
!!! TAAAAAATTCTAATTTTTTT+TGG - chr8_4:15006551-15006570 Msa1315530:intron 5.0%
!! AATTATATTAAGAAATAAAA+AGG - chr8_4:15006609-15006628 Msa1315530:intron 5.0%
!! AAAAAAAAATATAAAAGAAT+AGG - chr8_4:15007087-15007106 Msa1315530:intron 5.0%
!!! TAATTATCTTATTATAATTT+TGG - chr8_4:15011769-15011788 Msa1315530:intron 5.0%
CTGGTCTAGATGGAACTCCA+TGG + chr8_4:15003490-15003509 None:intergenic 50.0%
! GTGAGTTGTGCTGGTCTAGA+TGG + chr8_4:15003500-15003519 None:intergenic 50.0%
! AACCAGGTTTGTGGTGGAGA+AGG - chr8_4:15003755-15003774 Msa1315530:three_prime_UTR 50.0%
ATCCTTCTCCACCACAAACC+TGG + chr8_4:15003760-15003779 None:intergenic 50.0%
! AGGTTTGTGGTGGAGAAGGA+TGG - chr8_4:15003759-15003778 Msa1315530:three_prime_UTR 50.0%
GTCGATGAAACTCCAGCTAC+CGG + chr8_4:15003954-15003973 None:intergenic 50.0%
GGTAGCTGGAGTTTCATCGA+CGG - chr8_4:15003953-15003972 Msa1315530:intron 50.0%
AAAGTGGCGGTTTCGAAGGT+TGG + chr8_4:15003983-15004002 None:intergenic 50.0%
! ACCTTCGAAACCGCCACTTT+CGG - chr8_4:15003983-15004002 Msa1315530:intron 50.0%
CAAACTGAGGGTAAGTGTGG+TGG + chr8_4:15004429-15004448 None:intergenic 50.0%
!!! ATTTTGGCTCCCTCCCAGTA+CGG - chr8_4:15004743-15004762 Msa1315530:intron 50.0%
CATTCCATACCCTCCGTACT+GGG + chr8_4:15004759-15004778 None:intergenic 50.0%
TCATTCCATACCCTCCGTAC+TGG + chr8_4:15004760-15004779 None:intergenic 50.0%
TTGGGGGCCTATAAGCAATG+CGG + chr8_4:15005149-15005168 None:intergenic 50.0%
!! TTTAGCGGGCTTAGATGAGG+CGG + chr8_4:15006906-15006925 None:intergenic 50.0%
!!! TGACTCGGCTCGTTTTTAGC+GGG + chr8_4:15006920-15006939 None:intergenic 50.0%
! GCGGGGTAAGATTTTGGACT+CGG + chr8_4:15006953-15006972 None:intergenic 50.0%
!! CCCGTTTGGCTCGCTATTTT+TGG + chr8_4:15007661-15007680 None:intergenic 50.0%
! GCAAGTTGAGAATAGCAGGC+AGG + chr8_4:15008051-15008070 None:intergenic 50.0%
TTGCTAGAAGCCACCCATGA+AGG + chr8_4:15008415-15008434 None:intergenic 50.0%
GAGGACGTGACACATTGGAT+TGG + chr8_4:15008791-15008810 None:intergenic 50.0%
GAAAAGGGTTTCATGGAGGG+AGG + chr8_4:15009121-15009140 None:intergenic 50.0%
! AAAGAAGCACACGACAACGG+CGG - chr8_4:15009378-15009397 Msa1315530:intron 50.0%
CATCGTTCTTCACCTGCACT+TGG + chr8_4:15010194-15010213 None:intergenic 50.0%
! ACAAGTGCTGCCTTTGTTGC+AGG - chr8_4:15011095-15011114 Msa1315530:intron 50.0%
GAGTATGTCTGCAATGCCCT+TGG - chr8_4:15011816-15011835 Msa1315530:intron 50.0%
!! GGCTTTAGGATTGGAGACTC+TGG - chr8_4:15012976-15012995 Msa1315530:CDS 50.0%
! GTGGTGGAGAAGGATGGAAG+TGG - chr8_4:15003765-15003784 Msa1315530:three_prime_UTR 55.0%
AAACCGTCGTATCCGGTAGC+TGG - chr8_4:15003939-15003958 Msa1315530:intron 55.0%
ACTCCAGCTACCGGATACGA+CGG + chr8_4:15003945-15003964 None:intergenic 55.0%
ACCGAAAGTGGCGGTTTCGA+AGG + chr8_4:15003987-15004006 None:intergenic 55.0%
!! TTAGCGGGCTTAGATGAGGC+GGG + chr8_4:15006905-15006924 None:intergenic 55.0%
! AACGGGGCGGGGTAAGATTT+TGG + chr8_4:15006959-15006978 None:intergenic 55.0%
TCGCAAGTCCGCCACTAAAC+GGG + chr8_4:15006976-15006995 None:intergenic 55.0%
CTCGCAAGTCCGCCACTAAA+CGG + chr8_4:15006977-15006996 None:intergenic 55.0%
!! TTAGTGGCGGACTTGCGAGT+TGG - chr8_4:15006978-15006997 Msa1315530:intron 55.0%
GTTACGACGACAACAGGAGG+AGG + chr8_4:15007515-15007534 None:intergenic 55.0%
GCTCGTCTCGTTGAAAAGCG+GGG + chr8_4:15007589-15007608 None:intergenic 55.0%
GGCTCGTCTCGTTGAAAAGC+GGG + chr8_4:15007590-15007609 None:intergenic 55.0%
CGGCTCGTCTCGTTGAAAAG+CGG + chr8_4:15007591-15007610 None:intergenic 55.0%
AAATAGCGAGCCAAACGGGC+CGG - chr8_4:15007662-15007681 Msa1315530:intron 55.0%
GGCTTGAGGACGTGACACAT+TGG + chr8_4:15008796-15008815 None:intergenic 55.0%
! GTGATGCAGCCGGAGTTGAT+CGG + chr8_4:15009166-15009185 None:intergenic 55.0%
GGAGGCTCCGCGATTTATAC+TGG - chr8_4:15013096-15013115 Msa1315530:intron 55.0%
CCATACCCTCCGTACTGGGA+GGG + chr8_4:15004755-15004774 None:intergenic 60.0%
TCCATACCCTCCGTACTGGG+AGG + chr8_4:15004756-15004775 None:intergenic 60.0%
AAGGTCCGGGGTTTGAACCC+CGG - chr8_4:15006091-15006110 Msa1315530:intron 60.0%
TCTTACCCCGCCCCGTTTAG+TGG - chr8_4:15006962-15006981 Msa1315530:intron 60.0%
AAGTCCGCCACTAAACGGGG+CGG + chr8_4:15006972-15006991 None:intergenic 60.0%
CGCAAGTCCGCCACTAAACG+GGG + chr8_4:15006975-15006994 None:intergenic 60.0%
ACAACAGGAGGAGGAGGAGG+AGG + chr8_4:15007506-15007525 None:intergenic 60.0%
ACGACAACAGGAGGAGGAGG+AGG + chr8_4:15007509-15007528 None:intergenic 60.0%
ACGACGACAACAGGAGGAGG+AGG + chr8_4:15007512-15007531 None:intergenic 60.0%
GTCTCGTTGAAAAGCGGGGC+GGG + chr8_4:15007585-15007604 None:intergenic 60.0%
CGTCTCGTTGAAAAGCGGGG+CGG + chr8_4:15007586-15007605 None:intergenic 60.0%
! CAAAACGGGCTTGACCCGTC+GGG + chr8_4:15007688-15007707 None:intergenic 60.0%
! GCAAAACGGGCTTGACCCGT+CGG + chr8_4:15007689-15007708 None:intergenic 60.0%
TTGGCTCCCTCCCAGTACGG+AGG - chr8_4:15004746-15004765 Msa1315530:intron 65.0%
TGGCTCCCTCCCAGTACGGA+GGG - chr8_4:15004747-15004766 Msa1315530:intron 65.0%
CCCTCCCAGTACGGAGGGTA+TGG - chr8_4:15004752-15004771 Msa1315530:intron 65.0%
CTAGGGATGGCAAAGCGGGC+AGG - chr8_4:15006879-15006898 Msa1315530:CDS 65.0%
TACCCCGCCCCGTTTAGTGG+CGG - chr8_4:15006965-15006984 Msa1315530:intron 65.0%
AGTCCGCCACTAAACGGGGC+GGG + chr8_4:15006971-15006990 None:intergenic 65.0%
!! GTGGCGGACTTGCGAGTTGG+CGG - chr8_4:15006981-15007000 Msa1315530:intron 65.0%
!! TGGCGGACTTGCGAGTTGGC+GGG - chr8_4:15006982-15007001 Msa1315530:intron 65.0%
ACAGGAGGAGGAGGAGGAGG+AGG + chr8_4:15007503-15007522 None:intergenic 65.0%
TTGAAAAGCGGGGCGGGCAC+GGG + chr8_4:15007579-15007598 None:intergenic 65.0%
GTTGAAAAGCGGGGCGGGCA+CGG + chr8_4:15007580-15007599 None:intergenic 65.0%
GAAGCACACGACAACGGCGG+AGG - chr8_4:15009381-15009400 Msa1315530:intron 65.0%
GGTGGCCGGGGTTCAAACCC+CGG + chr8_4:15006099-15006118 None:intergenic 70.0%
GTCCGCCACTAAACGGGGCG+GGG + chr8_4:15006970-15006989 None:intergenic 70.0%
! GGACTTGCGAGTTGGCGGGC+CGG - chr8_4:15006986-15007005 Msa1315530:intron 70.0%
GGAGGAGGAGGAGGAGGAGG+AGG + chr8_4:15007497-15007516 None:intergenic 70.0%
TGAAAAGCGGGGCGGGCACG+GGG + chr8_4:15007578-15007597 None:intergenic 70.0%
AGCCAAACGGGCCGGCCCGA+CGG - chr8_4:15007670-15007689 Msa1315530:intron 75.0%
ACGGGCTTGACCCGTCGGGC+CGG + chr8_4:15007684-15007703 None:intergenic 75.0%
! GCCAAACGGGCCGGCCCGAC+GGG - chr8_4:15007671-15007690 Msa1315530:intron 80.0%
! ACCCGTCGGGCCGGCCCGTT+TGG + chr8_4:15007675-15007694 None:intergenic 80.0%
!! GGGCACGGGGTGTGGCGGGG+CGG + chr8_4:15007565-15007584 None:intergenic 85.0%
! GGCGGGCACGGGGTGTGGCG+GGG + chr8_4:15007568-15007587 None:intergenic 85.0%
! GGGCGGGCACGGGGTGTGGC+GGG + chr8_4:15007569-15007588 None:intergenic 85.0%
! GGGGCGGGCACGGGGTGTGG+CGG + chr8_4:15007570-15007589 None:intergenic 85.0%
! AGCGGGGCGGGCACGGGGTG+TGG + chr8_4:15007573-15007592 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 15003419 15013499 15003419 ID=Msa1315530;Name=Msa1315530
chr8_4 mRNA 15003419 15013499 15003419 ID=Msa1315530-mRNA-1;Parent=Msa1315530;Name=Msa1315530-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0.62|0.55|0.77|0.5|0.44|9|697|196
chr8_4 exon 15003419 15003934 15003419 ID=Msa1315530-mRNA-1:exon:5765;Parent=Msa1315530-mRNA-1
chr8_4 exon 15004097 15004151 15004097 ID=Msa1315530-mRNA-1:exon:5764;Parent=Msa1315530-mRNA-1
chr8_4 exon 15005740 15005801 15005740 ID=Msa1315530-mRNA-1:exon:5763;Parent=Msa1315530-mRNA-1
chr8_4 exon 15005913 15005941 15005913 ID=Msa1315530-mRNA-1:exon:5762;Parent=Msa1315530-mRNA-1
chr8_4 exon 15006626 15006717 15006626 ID=Msa1315530-mRNA-1:exon:5761;Parent=Msa1315530-mRNA-1
chr8_4 exon 15006818 15006898 15006818 ID=Msa1315530-mRNA-1:exon:5760;Parent=Msa1315530-mRNA-1
chr8_4 exon 15007373 15007476 15007373 ID=Msa1315530-mRNA-1:exon:5759;Parent=Msa1315530-mRNA-1
chr8_4 exon 15012914 15013055 15012914 ID=Msa1315530-mRNA-1:exon:5758;Parent=Msa1315530-mRNA-1
chr8_4 exon 15013293 15013499 15013293 ID=Msa1315530-mRNA-1:exon:5757;Parent=Msa1315530-mRNA-1
chr8_4 CDS 15013293 15013499 15013293 ID=Msa1315530-mRNA-1:cds;Parent=Msa1315530-mRNA-1
chr8_4 CDS 15012914 15013055 15012914 ID=Msa1315530-mRNA-1:cds;Parent=Msa1315530-mRNA-1
chr8_4 CDS 15007373 15007476 15007373 ID=Msa1315530-mRNA-1:cds;Parent=Msa1315530-mRNA-1
chr8_4 CDS 15006818 15006898 15006818 ID=Msa1315530-mRNA-1:cds;Parent=Msa1315530-mRNA-1
chr8_4 CDS 15006661 15006717 15006661 ID=Msa1315530-mRNA-1:cds;Parent=Msa1315530-mRNA-1
chr8_4 three_prime_UTR 15006626 15006660 15006626 ID=Msa1315530-mRNA-1:three_prime_utr;Parent=Msa1315530-mRNA-1
chr8_4 three_prime_UTR 15005913 15005941 15005913 ID=Msa1315530-mRNA-1:three_prime_utr;Parent=Msa1315530-mRNA-1
chr8_4 three_prime_UTR 15005740 15005801 15005740 ID=Msa1315530-mRNA-1:three_prime_utr;Parent=Msa1315530-mRNA-1
chr8_4 three_prime_UTR 15004097 15004151 15004097 ID=Msa1315530-mRNA-1:three_prime_utr;Parent=Msa1315530-mRNA-1
chr8_4 three_prime_UTR 15003419 15003934 15003419 ID=Msa1315530-mRNA-1:three_prime_utr;Parent=Msa1315530-mRNA-1
Gene Sequence

>Msa1315530

ATGAGGTGCGCATCTTTGTTATCTTCATTATGGTCCTCTTTGGTCCTCTCTTTATCTTCTTCTTCTGGCCATGGAGTTCCATCTAGACCAGCACAACTCACATCTTCTAAAGGAGTAGCTTTTGTCGTTTCCTCTTTTGTTGAATGTTTTGATCCAATCACTCATTCACCATACTTTATATTTGTGTCACCACTATCACCTCTACTTAAAGGGGTGTATGTAGAGAATATTGATTTGGATAAGAGTACATGGAATGTGATGATTAATGGTGATGGTATGACAGAAACCGTCGTATCCGGTAGCTGGAGTTTCATCGACGGCACACCAACCTTCGAAACCGCCACTTTCGAGTATAGAACTATTCTCTTACAATCTCTCTGGTTTGTTTTTCCAGAACGATACCACAGGAAAAAAATGAGGCAACTCCAAATGAATGGATGGTCTATAACTCAGCACCTTCCATTGCTTTTTCAGAAATTCAAAAGGGATGAAGGTGAAAAATACATCCCTTCCTTTTTTTTGCATAAATTCAGGGTGAAGAACGATGATTTGAAAATGAAAGTTAAATTCAAAAATTGGAGAGAAGTTTGA
Protein sequence

>Msa1315530

MRCASLLSSLWSSLVLSLSSSSGHGVPSRPAQLTSSKGVAFVVSSFVECFDPITHSPYFIFVSPLSPLLKGVYVENIDLDKSTWNVMINGDGMTETVVSGSWSFIDGTPTFETATFEYRTILLQSLWFVFPERYHRKKMRQLQMNGWSITQHLPLLFQKFKRDEGEKYIPSFFLHKFRVKNDDLKMKVKFKNWREV*