Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1318150 | XP_013444801.2 | 85.052 | 669 | 40 | 3 | 1 | 609 | 1 | 669 | 0.0 | 1073 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1318150 | sp|P92949|FRO2_ARATH | 51.208 | 662 | 245 | 11 | 6 | 595 | 24 | 679 | 0.0 | 610 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1318150 | A0A072TNR0 | 84.903 | 669 | 41 | 3 | 1 | 609 | 1 | 669 | 0.0 | 1071 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0777060 | Msa1318150 | 0.811030 | 8.581632e-51 | -8.615850e-47 |
| Msa0814160 | Msa1318150 | 0.819920 | 9.014913e-53 | -8.615850e-47 |
| Msa0220090 | Msa1318150 | 0.810195 | 1.300295e-50 | -8.615850e-47 |
| Msa1278640 | Msa1318150 | 0.884600 | 1.669340e-71 | -8.615850e-47 |
| Msa1318150 | Msa1431330 | 0.892119 | 2.129672e-74 | -8.615850e-47 |
| Msa0261400 | Msa1318150 | 0.803573 | 3.269125e-49 | -8.615850e-47 |
| Msa1177850 | Msa1318150 | 0.815143 | 1.074891e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1318150 | MtrunA17_Chr8g0348521 | 84.885 | 655 | 39 | 3 | 1 | 595 | 1 | 655 | 0.0 | 1049 |
| Msa1318150 | MtrunA17_Chr8g0348531 | 73.201 | 653 | 111 | 6 | 6 | 595 | 19 | 670 | 0.0 | 841 |
| Msa1318150 | MtrunA17_Chr1g0202731 | 45.909 | 660 | 288 | 9 | 1 | 595 | 6 | 661 | 0.0 | 565 |
| Msa1318150 | MtrunA17_Chr1g0202741 | 46.061 | 660 | 287 | 11 | 1 | 595 | 1 | 656 | 0.0 | 559 |
| Msa1318150 | MtrunA17_Chr8g0349071 | 69.637 | 303 | 31 | 5 | 232 | 473 | 1 | 303 | 1.04e-128 | 380 |
| Msa1318150 | MtrunA17_Chr8g0349061 | 96.575 | 146 | 5 | 0 | 1 | 146 | 1 | 146 | 3.13e-94 | 286 |
| Msa1318150 | MtrunA17_Chr2g0291481 | 27.907 | 645 | 355 | 15 | 35 | 596 | 68 | 685 | 6.46e-76 | 256 |
| Msa1318150 | MtrunA17_Chr8g0349081 | 96.000 | 75 | 3 | 0 | 521 | 595 | 1 | 75 | 1.24e-41 | 146 |
| Msa1318150 | MtrunA17_Chr4g0058571 | 32.776 | 299 | 194 | 4 | 13 | 310 | 30 | 322 | 5.53e-39 | 152 |
| Msa1318150 | MtrunA17_Chr4g0058571 | 29.180 | 305 | 181 | 11 | 311 | 596 | 383 | 671 | 1.58e-23 | 105 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1318150 | AT1G01580.1 | 51.208 | 662 | 245 | 11 | 6 | 595 | 24 | 679 | 0.0 | 610 |
| Msa1318150 | AT1G01580.2 | 51.208 | 662 | 245 | 11 | 6 | 595 | 102 | 757 | 0.0 | 609 |
| Msa1318150 | AT1G01590.1 | 44.978 | 667 | 279 | 17 | 1 | 594 | 6 | 657 | 0.0 | 528 |
| Msa1318150 | AT1G23020.6 | 45.329 | 653 | 276 | 13 | 6 | 594 | 12 | 647 | 4.72e-174 | 511 |
| Msa1318150 | AT1G23020.2 | 45.329 | 653 | 276 | 13 | 6 | 594 | 35 | 670 | 7.30e-174 | 511 |
| Msa1318150 | AT1G23020.7 | 45.399 | 652 | 273 | 14 | 6 | 594 | 12 | 643 | 5.19e-173 | 508 |
| Msa1318150 | AT1G23020.4 | 45.413 | 654 | 273 | 15 | 6 | 594 | 12 | 646 | 5.35e-173 | 508 |
| Msa1318150 | AT1G23020.3 | 45.413 | 654 | 273 | 15 | 6 | 594 | 12 | 646 | 5.35e-173 | 508 |
| Msa1318150 | AT1G23020.1 | 45.413 | 654 | 273 | 15 | 6 | 594 | 35 | 669 | 1.04e-172 | 508 |
| Msa1318150 | AT1G23020.5 | 45.413 | 654 | 273 | 15 | 6 | 594 | 35 | 669 | 1.04e-172 | 508 |
| Msa1318150 | AT5G23990.2 | 42.097 | 658 | 303 | 12 | 6 | 595 | 5 | 652 | 9.23e-168 | 495 |
| Msa1318150 | AT5G23980.1 | 40.701 | 656 | 315 | 9 | 6 | 595 | 5 | 652 | 2.27e-163 | 483 |
| Msa1318150 | AT5G23990.1 | 37.386 | 658 | 292 | 13 | 6 | 595 | 5 | 610 | 4.87e-134 | 407 |
| Msa1318150 | AT5G23990.3 | 43.026 | 509 | 220 | 9 | 155 | 595 | 14 | 520 | 3.28e-129 | 391 |
| Msa1318150 | AT5G49730.1 | 27.596 | 674 | 386 | 19 | 8 | 596 | 27 | 683 | 2.52e-67 | 233 |
| Msa1318150 | AT5G49730.2 | 28.767 | 511 | 281 | 13 | 8 | 442 | 27 | 530 | 1.62e-59 | 208 |
| Msa1318150 | AT5G49740.2 | 31.065 | 338 | 218 | 7 | 8 | 339 | 34 | 362 | 1.10e-50 | 184 |
| Msa1318150 | AT5G49740.2 | 32.394 | 142 | 80 | 4 | 316 | 442 | 399 | 539 | 5.30e-13 | 72.4 |
| Msa1318150 | AT5G50160.1 | 25.292 | 684 | 387 | 23 | 18 | 605 | 19 | 674 | 1.83e-50 | 186 |
| Msa1318150 | AT5G49740.3 | 30.267 | 337 | 222 | 5 | 8 | 339 | 34 | 362 | 1.53e-49 | 183 |
| Msa1318150 | AT5G49740.3 | 26.557 | 305 | 189 | 12 | 316 | 596 | 399 | 692 | 1.05e-16 | 84.3 |
| Msa1318150 | AT5G49740.1 | 30.267 | 337 | 222 | 5 | 8 | 339 | 34 | 362 | 1.63e-49 | 184 |
| Msa1318150 | AT5G49740.1 | 26.557 | 305 | 189 | 12 | 316 | 596 | 399 | 692 | 1.29e-16 | 84.3 |
| Msa1318150 | AT5G50160.2 | 26.877 | 506 | 253 | 16 | 196 | 605 | 11 | 495 | 5.63e-47 | 174 |
Find 126 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTGGTGGTGCTGTTGTTTC+TGG | 0.048121 | 8_4:+20072212 | Msa1318150:CDS |
| CAATATTCTCGGATCCTTTA+AGG | 0.086839 | 8_4:+20075765 | Msa1318150:CDS |
| GATTTGATCCTACCAATTTC+TGG | 0.166442 | 8_4:+20075482 | Msa1318150:CDS |
| CCCTAGTTTCTACCTCTTCT+TGG | 0.174450 | 8_4:+20074694 | Msa1318150:CDS |
| CAAATACTTTCAACGTAAAA+TGG | 0.193678 | 8_4:+20072265 | Msa1318150:CDS |
| AAGGCTGATCCTACCTATTT+TGG | 0.222309 | 8_4:+20072306 | Msa1318150:CDS |
| TGGGGATGAATTGGAGTATC+TGG | 0.239412 | 8_4:-20075572 | None:intergenic |
| TCATCTGTGCTACCAATATT+TGG | 0.246300 | 8_4:+20073704 | Msa1318150:CDS |
| ATCATCTTCCTTATCATAAT+CGG | 0.250318 | 8_4:+20075695 | Msa1318150:CDS |
| TGTTACTTCTAATAGTAAAT+TGG | 0.256282 | 8_4:+20075060 | Msa1318150:intron |
| TGTTCTTGAATGAAGAAATT+AGG | 0.262375 | 8_4:-20075439 | None:intergenic |
| CAAAGTTGGAGTATCAAATT+TGG | 0.274753 | 8_4:+20074508 | Msa1318150:CDS |
| TTTCAAGTGTAGCTGTCTTA+TGG | 0.275222 | 8_4:+20075831 | Msa1318150:CDS |
| TATACCTTGTGCACCAAAAT+AGG | 0.277983 | 8_4:-20072319 | None:intergenic |
| ATGTTTAGGAACGCCCTTAA+AGG | 0.285074 | 8_4:-20075779 | None:intergenic |
| TTGCAACCATTCCAAGAATT+AGG | 0.290013 | 8_4:+20074570 | Msa1318150:CDS |
| AATCATTGCAGATGTTGATA+TGG | 0.292631 | 8_4:+20074483 | Msa1318150:intron |
| GTTGTATCAAGTATCATATT+TGG | 0.293438 | 8_4:+20073741 | Msa1318150:CDS |
| TGTTCATTGCACTTCTTGTT+TGG | 0.302432 | 8_4:+20072785 | Msa1318150:CDS |
| TTGGCTTGAGCCATAGAGTT+TGG | 0.304302 | 8_4:-20075592 | None:intergenic |
| GGAGAGATATCTTTGCTTGC+TGG | 0.309354 | 8_4:+20074533 | Msa1318150:CDS |
| TCAATCTATAATAAGGTTAT+TGG | 0.310440 | 8_4:+20072194 | Msa1318150:CDS |
| AACCGTCCAATGCTTGTAAA+AGG | 0.316685 | 8_4:+20072718 | Msa1318150:CDS |
| TGGCTTGAGCCATAGAGTTT+GGG | 0.317343 | 8_4:-20075591 | None:intergenic |
| ATGTAGAGACCTTAAGTAAT+TGG | 0.323349 | 8_4:-20075215 | None:intergenic |
| ATGTCACATGTGCCAGAAAT+TGG | 0.325741 | 8_4:-20075494 | None:intergenic |
| GTGAGGCTCAATCTATAATA+AGG | 0.341776 | 8_4:+20072187 | Msa1318150:CDS |
| AGTCTTGTTAATAGCTACTT+TGG | 0.343222 | 8_4:+20072508 | Msa1318150:CDS |
| TCTCTAATGATAGAGATAAA+AGG | 0.343493 | 8_4:-20075368 | None:intergenic |
| ATCAGTTCATCGGATGGATT+TGG | 0.350108 | 8_4:-20075611 | None:intergenic |
| CAAATTTGATACTCCAACTT+TGG | 0.350831 | 8_4:-20074507 | None:intergenic |
| ATATCTGTTGAAGGTCCTTA+TGG | 0.351254 | 8_4:+20075181 | Msa1318150:CDS |
| AGTTGTATAGTGTGGGAATA+TGG | 0.354213 | 8_4:+20073624 | Msa1318150:CDS |
| CAATTCATCCCCAAACTCTA+TGG | 0.364176 | 8_4:+20075582 | Msa1318150:CDS |
| TTGGTGGTGCTGTTGTTTCT+GGG | 0.377746 | 8_4:+20072213 | Msa1318150:CDS |
| GTCTTGTTAATAGCTACTTT+GGG | 0.378957 | 8_4:+20072509 | Msa1318150:CDS |
| AATATTCTCGGATCCTTTAA+GGG | 0.379920 | 8_4:+20075766 | Msa1318150:CDS |
| TTTACGTTGAAAGTATTTGT+AGG | 0.383540 | 8_4:-20072261 | None:intergenic |
| GGAATATGGTTAGGTCTTGT+TGG | 0.389598 | 8_4:+20073638 | Msa1318150:CDS |
| GAAGAAATTAGGACAATGTT+TGG | 0.390489 | 8_4:-20075428 | None:intergenic |
| CTGCTTCAACCAATTACTTA+AGG | 0.392561 | 8_4:+20075206 | Msa1318150:CDS |
| TAGGTCCAAACAGCTGGCTT+TGG | 0.398790 | 8_4:+20075645 | Msa1318150:CDS |
| GAAGCTACAAATGTGCATTA+TGG | 0.399147 | 8_4:+20075983 | Msa1318150:CDS |
| CACATATTACTAGCATGTTT+AGG | 0.401415 | 8_4:-20075793 | None:intergenic |
| CATAGAGTTTGGGGATGAAT+TGG | 0.401457 | 8_4:-20075581 | None:intergenic |
| ATCAAGTATCATATTTGGCT+TGG | 0.406324 | 8_4:+20073746 | Msa1318150:CDS |
| TTTGCACAATCAGTCGTAAT+GGG | 0.416566 | 8_4:+20072671 | Msa1318150:intron |
| TCTTGTTGGGAACATATGTT+TGG | 0.419914 | 8_4:+20073652 | Msa1318150:CDS |
| CCAAACAGCTGGCTTTGGCT+TGG | 0.423955 | 8_4:+20075650 | Msa1318150:CDS |
| GCTTCAACAAGGGACTGATA+TGG | 0.424565 | 8_4:-20075965 | None:intergenic |
| TCAGAAGTGAGGCCAAATAT+TGG | 0.428860 | 8_4:-20073716 | None:intergenic |
| CCAAGCCAAAGCCAGCTGTT+TGG | 0.429800 | 8_4:-20075650 | None:intergenic |
| GAATTTGTTACATCATCCAT+TGG | 0.432515 | 8_4:+20073801 | Msa1318150:CDS |
| GAACTGATACATGCTATGTT+AGG | 0.441854 | 8_4:+20075626 | Msa1318150:CDS |
| AGCGAAACAGATTCAGAACT+TGG | 0.447743 | 8_4:+20075874 | Msa1318150:CDS |
| TCATTAAATGTGGAGGAACT+TGG | 0.448662 | 8_4:+20075104 | Msa1318150:CDS |
| TGCTTGCTGGTTTGTTCCTG+TGG | 0.451945 | 8_4:+20074546 | Msa1318150:CDS |
| GCGAAGGATTTGAAAGCAAC+TGG | 0.456692 | 8_4:-20075141 | None:intergenic |
| TCATCTTCCTTATCATAATC+GGG | 0.456880 | 8_4:+20075696 | Msa1318150:CDS |
| TAATATTCAACTCCAAATTG+AGG | 0.460431 | 8_4:+20075520 | Msa1318150:CDS |
| AAGCATTGGACGGTTCCATA+TGG | 0.468549 | 8_4:-20072710 | None:intergenic |
| AAAGTAGCTATTAACAAGAC+TGG | 0.468699 | 8_4:-20072506 | None:intergenic |
| GAATATGGTTAGGTCTTGTT+GGG | 0.469125 | 8_4:+20073639 | Msa1318150:CDS |
| GCAAGAGAAGTTGTATAGTG+TGG | 0.469438 | 8_4:+20073616 | Msa1318150:CDS |
| AGACTGGAAAAGTGTACATA+AGG | 0.479175 | 8_4:-20072490 | None:intergenic |
| AATTTGTTACATCATCCATT+GGG | 0.484395 | 8_4:+20073802 | Msa1318150:CDS |
| GTGTGATGTATGCCTCAATT+TGG | 0.484646 | 8_4:-20075532 | None:intergenic |
| CTATGTTAGGTCCAAACAGC+TGG | 0.487386 | 8_4:+20075639 | Msa1318150:CDS |
| CTTAAGTAATTGGTTGAAGC+AGG | 0.487443 | 8_4:-20075205 | None:intergenic |
| TATAGTGTGGGAATATGGTT+AGG | 0.492943 | 8_4:+20073629 | Msa1318150:CDS |
| TTGGTTGAAGCAGGTCCATA+AGG | 0.493515 | 8_4:-20075196 | None:intergenic |
| TAACACGAATGCAATATTCT+CGG | 0.497622 | 8_4:+20075754 | Msa1318150:CDS |
| ACCAAGAAGAGGTAGAAACT+AGG | 0.499474 | 8_4:-20074695 | None:intergenic |
| GTTGGAGTATCAAATTTGGC+TGG | 0.503021 | 8_4:+20074512 | Msa1318150:CDS |
| GATAAGGAAGATGATGAAAG+AGG | 0.503549 | 8_4:-20075687 | None:intergenic |
| CCAAGAAGAGGTAGAAACTA+GGG | 0.503705 | 8_4:-20074694 | None:intergenic |
| TCTTGGTTGATCGTTTCCTA+AGG | 0.507895 | 8_4:+20074711 | Msa1318150:CDS |
| ATCTATAATAAGGTTATTGG+TGG | 0.512827 | 8_4:+20072197 | Msa1318150:CDS |
| AGAAACATGGGACAACCATA+TGG | 0.513216 | 8_4:+20072695 | Msa1318150:CDS |
| ATATTTGGCCTCACTTCTGA+AGG | 0.519844 | 8_4:+20073719 | Msa1318150:CDS |
| CCTTCGCCTATCGATCGTCT+TGG | 0.520135 | 8_4:+20075157 | Msa1318150:CDS |
| CAAGAGAAGTTGTATAGTGT+GGG | 0.522227 | 8_4:+20073617 | Msa1318150:CDS |
| CGTCTTGGAATATCTGTTGA+AGG | 0.525872 | 8_4:+20075172 | Msa1318150:CDS |
| TTGGAATGGTTGCAATCCAC+AGG | 0.526279 | 8_4:-20074562 | None:intergenic |
| CATTCGTGTTATGATCGATC+GGG | 0.527325 | 8_4:-20075742 | None:intergenic |
| AGGGAGCATAGTGAAGGAAA+AGG | 0.527997 | 8_4:-20074675 | None:intergenic |
| TAATGATCCCGATTATGATA+AGG | 0.534877 | 8_4:-20075703 | None:intergenic |
| CATAGCATGTATCAGTTCAT+CGG | 0.545444 | 8_4:-20075621 | None:intergenic |
| ATGTTGATATGGACCAAAGT+TGG | 0.550286 | 8_4:+20074494 | Msa1318150:CDS |
| GCATTCGTGTTATGATCGAT+CGG | 0.552112 | 8_4:-20075743 | None:intergenic |
| ACAGATGATCCACGTGTCAC+CGG | 0.553412 | 8_4:-20073689 | None:intergenic |
| GGCTTGAGCCATAGAGTTTG+GGG | 0.556441 | 8_4:-20075590 | None:intergenic |
| GCATTGTAAATCGTTGAACT+TGG | 0.556879 | 8_4:-20075920 | None:intergenic |
| AAACAGATTCAGAACTTGGA+AGG | 0.559017 | 8_4:+20075878 | Msa1318150:CDS |
| AGTCGTAATGGGAAGAAACA+TGG | 0.559139 | 8_4:+20072682 | Msa1318150:intron |
| CTAAGTGTGGTCATTAAATG+TGG | 0.560059 | 8_4:+20075094 | Msa1318150:CDS |
| CACATTTGTAGCTTCAACAA+GGG | 0.575405 | 8_4:-20075975 | None:intergenic |
| TTGGCTTGGACACATGCTCA+TGG | 0.581558 | 8_4:+20073760 | Msa1318150:CDS |
| ATGCTTGTAAAAGGACCACT+TGG | 0.586115 | 8_4:+20072727 | Msa1318150:CDS |
| GCATGTATCAGTTCATCGGA+TGG | 0.591379 | 8_4:-20075617 | None:intergenic |
| TTTGATTAGTAGATGCCCAA+TGG | 0.593677 | 8_4:-20073817 | None:intergenic |
| CCAAGACGATCGATAGGCGA+AGG | 0.597386 | 8_4:-20075157 | None:intergenic |
| GTGATGGTGAGTGGAGGAAG+TGG | 0.598975 | 8_4:+20075338 | Msa1318150:CDS |
| TTTACAACTTATTTGCACAT+CGG | 0.603937 | 8_4:+20072811 | Msa1318150:CDS |
| GCACATTTGTAGCTTCAACA+AGG | 0.609848 | 8_4:-20075976 | None:intergenic |
| GACACACTTGTGATGGTGAG+TGG | 0.610694 | 8_4:+20075329 | Msa1318150:CDS |
| CCTTGTGCACCAAAATAGGT+AGG | 0.611441 | 8_4:-20072315 | None:intergenic |
| GATATTCCAAGACGATCGAT+AGG | 0.613464 | 8_4:-20075163 | None:intergenic |
| AGGTAGGATCAGCCTTGCCA+CGG | 0.616622 | 8_4:-20072299 | None:intergenic |
| GTTGAACTTGGTGAGACTGT+TGG | 0.624890 | 8_4:-20075908 | None:intergenic |
| AGATGATGAAGATTACGTAG+AGG | 0.625059 | 8_4:-20074628 | None:intergenic |
| GTTGCCTAAAATCCGTGGCA+AGG | 0.630628 | 8_4:+20072287 | Msa1318150:CDS |
| CACATGTGCCAGAAATTGGT+AGG | 0.631801 | 8_4:-20075490 | None:intergenic |
| AACAGATTCAGAACTTGGAA+GGG | 0.636327 | 8_4:+20075879 | Msa1318150:CDS |
| GGAAACGATCAACCAAGAAG+AGG | 0.638587 | 8_4:-20074706 | None:intergenic |
| CAACAAGGGACTGATATGGA+AGG | 0.639217 | 8_4:-20075961 | None:intergenic |
| GTCGTAATGGGAAGAAACAT+GGG | 0.641838 | 8_4:+20072683 | Msa1318150:intron |
| AAATGGTTGCCTAAAATCCG+TGG | 0.642273 | 8_4:+20072282 | Msa1318150:CDS |
| ATCTACTAATCAAATGTCAG+AGG | 0.642524 | 8_4:+20073826 | Msa1318150:CDS |
| GAAACTAGGGAGCATAGTGA+AGG | 0.643522 | 8_4:-20074681 | None:intergenic |
| AGTGTGGTCATTAAATGTGG+AGG | 0.644496 | 8_4:+20075097 | Msa1318150:CDS |
| GTGATAGAAACAATTCCAAG+TGG | 0.660807 | 8_4:-20072742 | None:intergenic |
| CAGGCATGACACACTTGTGA+TGG | 0.673949 | 8_4:+20075322 | Msa1318150:intron |
| TGATACAACCTTCAGAAGTG+AGG | 0.679665 | 8_4:-20073727 | None:intergenic |
| GGAGCCAGAAAAGCTAAGTG+TGG | 0.686922 | 8_4:+20075081 | Msa1318150:CDS |
| ACACTTGTGATGGTGAGTGG+AGG | 0.758886 | 8_4:+20075332 | Msa1318150:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTGTTTTTATTTTTTATTA+AGG | - | chr8_4:20073143-20073162 | None:intergenic | 10.0% |
| !!! | AATACAATATTTTTAGTAAT+TGG | - | chr8_4:20073373-20073392 | None:intergenic | 10.0% |
| !!! | ATATTAATTGTTCTTATTTC+AGG | + | chr8_4:20072458-20072477 | Msa1318150:intron | 15.0% |
| !! | TCAAATAAATTAATTCGAAT+AGG | - | chr8_4:20074859-20074878 | None:intergenic | 15.0% |
| !! | TCAATCTATAATAAGGTTAT+TGG | + | chr8_4:20072194-20072213 | Msa1318150:CDS | 20.0% |
| !! | AAATAATCTTGTTCACAAAA+AGG | + | chr8_4:20072976-20072995 | Msa1318150:intron | 20.0% |
| !! | TCTTATCATACCTATTAATT+AGG | + | chr8_4:20073012-20073031 | Msa1318150:intron | 20.0% |
| !! | TGATTCAAAACCTAATTAAT+AGG | - | chr8_4:20073025-20073044 | None:intergenic | 20.0% |
| !! | AATATTATCAGTTTGATTCT+TGG | + | chr8_4:20073091-20073110 | Msa1318150:intron | 20.0% |
| !! | AAGATTAATTATGAAGTTGA+CGG | - | chr8_4:20073173-20073192 | None:intergenic | 20.0% |
| !! | TAAATATTGAATTGCATTTG+TGG | + | chr8_4:20073287-20073306 | Msa1318150:intron | 20.0% |
| !! | TAACTCTTAAATTAAATCAC+AGG | - | chr8_4:20073901-20073920 | None:intergenic | 20.0% |
| !! | TTAATCTTAATCTTACTCTT+GGG | - | chr8_4:20073925-20073944 | None:intergenic | 20.0% |
| !! | TTTAATCTTAATCTTACTCT+TGG | - | chr8_4:20073926-20073945 | None:intergenic | 20.0% |
| !! | AGTTATTCATTTAATGTCTT+GGG | + | chr8_4:20073998-20074017 | Msa1318150:intron | 20.0% |
| !! | AAAAGTCAATATTCAATCTA+AGG | - | chr8_4:20074139-20074158 | None:intergenic | 20.0% |
| !!! | GGAAATTTTTTATGTGAATT+GGG | - | chr8_4:20074367-20074386 | None:intergenic | 20.0% |
| !!! | AGGAAATTTTTTATGTGAAT+TGG | - | chr8_4:20074368-20074387 | None:intergenic | 20.0% |
| !! | AAGACAAAAATAACTTGAAA+AGG | - | chr8_4:20074428-20074447 | None:intergenic | 20.0% |
| !!! | TGTTACTTCTAATAGTAAAT+TGG | + | chr8_4:20075060-20075079 | Msa1318150:intron | 20.0% |
| ! | ATCTATAATAAGGTTATTGG+TGG | + | chr8_4:20072197-20072216 | Msa1318150:CDS | 25.0% |
| !!! | TTCTGGGTTTTATTATGATT+TGG | + | chr8_4:20072229-20072248 | Msa1318150:CDS | 25.0% |
| !!! | TTTACGTTGAAAGTATTTGT+AGG | - | chr8_4:20072264-20072283 | None:intergenic | 25.0% |
| ! | CAAATACTTTCAACGTAAAA+TGG | + | chr8_4:20072265-20072284 | Msa1318150:CDS | 25.0% |
| ! | AAATAGGGATAACTAGATTA+AGG | - | chr8_4:20072606-20072625 | None:intergenic | 25.0% |
| ! | ATTAGAGTATAGCACAAATA+GGG | - | chr8_4:20072621-20072640 | None:intergenic | 25.0% |
| ! | AATTAGAGTATAGCACAAAT+AGG | - | chr8_4:20072622-20072641 | None:intergenic | 25.0% |
| ! | TTTACAACTTATTTGCACAT+CGG | + | chr8_4:20072811-20072830 | Msa1318150:CDS | 25.0% |
| ! | TAAAACAGTCTCAAAAATAG+CGG | + | chr8_4:20072837-20072856 | Msa1318150:CDS | 25.0% |
| !!! | TTTTTAAGGTTTAGGTCTTT+GGG | - | chr8_4:20073204-20073223 | None:intergenic | 25.0% |
| !!! | ATTTTTAAGGTTTAGGTCTT+TGG | - | chr8_4:20073205-20073224 | None:intergenic | 25.0% |
| !!! | ACATGGTATTTTTAAGGTTT+AGG | - | chr8_4:20073212-20073231 | None:intergenic | 25.0% |
| ! | TAAACCTTAAAAATACCATG+TGG | + | chr8_4:20073211-20073230 | Msa1318150:intron | 25.0% |
| ! | TAGGATGTTTAACCTTTAAT+AGG | - | chr8_4:20073245-20073264 | None:intergenic | 25.0% |
| ! | AAGGTTAAACATCCTAATTA+CGG | + | chr8_4:20073249-20073268 | Msa1318150:intron | 25.0% |
| !! | CATAGCTTTTCACAATATTT+TGG | - | chr8_4:20073338-20073357 | None:intergenic | 25.0% |
| ! | GTTGTATCAAGTATCATATT+TGG | + | chr8_4:20073741-20073760 | Msa1318150:CDS | 25.0% |
| !!! | AATTTGTTACATCATCCATT+GGG | + | chr8_4:20073802-20073821 | Msa1318150:CDS | 25.0% |
| ! | AATTAAATCACAGGTAAGTA+GGG | - | chr8_4:20073892-20073911 | None:intergenic | 25.0% |
| ! | AAATTAAATCACAGGTAAGT+AGG | - | chr8_4:20073893-20073912 | None:intergenic | 25.0% |
| ! | CAGTTATTCATTTAATGTCT+TGG | + | chr8_4:20073997-20074016 | Msa1318150:intron | 25.0% |
| ! | AATTCAACAAACGTTAATAG+AGG | - | chr8_4:20074311-20074330 | None:intergenic | 25.0% |
| !! | TTAGTATTGTATTTAGCTCA+CGG | + | chr8_4:20074447-20074466 | Msa1318150:intron | 25.0% |
| !! | AAGAATTTTCTCCTAATTCT+TGG | - | chr8_4:20074584-20074603 | None:intergenic | 25.0% |
| ! | TTATCTTAAAGTAAACTCGT+AGG | + | chr8_4:20074832-20074851 | Msa1318150:intron | 25.0% |
| ! | CTATTAGAAGTAACAGTAAA+TGG | - | chr8_4:20075055-20075074 | None:intergenic | 25.0% |
| ! | TCTCTAATGATAGAGATAAA+AGG | - | chr8_4:20075371-20075390 | None:intergenic | 25.0% |
| ! | TGTTCTTGAATGAAGAAATT+AGG | - | chr8_4:20075442-20075461 | None:intergenic | 25.0% |
| ! | TAATATTCAACTCCAAATTG+AGG | + | chr8_4:20075520-20075539 | Msa1318150:CDS | 25.0% |
| ! | ATCATCTTCCTTATCATAAT+CGG | + | chr8_4:20075695-20075714 | Msa1318150:CDS | 25.0% |
| AAAGTAGCTATTAACAAGAC+TGG | - | chr8_4:20072509-20072528 | None:intergenic | 30.0% | |
| !! | AGTCTTGTTAATAGCTACTT+TGG | + | chr8_4:20072508-20072527 | Msa1318150:CDS | 30.0% |
| ! | GTCTTGTTAATAGCTACTTT+GGG | + | chr8_4:20072509-20072528 | Msa1318150:CDS | 30.0% |
| !!! | GCTCTCATTTGATGATTTTT+TGG | - | chr8_4:20072555-20072574 | None:intergenic | 30.0% |
| CTTGGAGTTGTCTATATAAA+AGG | + | chr8_4:20073109-20073128 | Msa1318150:intron | 30.0% | |
| !! | ACAACCACATGGTATTTTTA+AGG | - | chr8_4:20073218-20073237 | None:intergenic | 30.0% |
| TTAAAAATACCATGTGGTTG+TGG | + | chr8_4:20073217-20073236 | Msa1318150:intron | 30.0% | |
| TTAAACATCCTAATTACGGT+TGG | + | chr8_4:20073253-20073272 | Msa1318150:intron | 30.0% | |
| TAAACATCCTAATTACGGTT+GGG | + | chr8_4:20073254-20073273 | Msa1318150:intron | 30.0% | |
| TGTGCTGTAATGTTATATTG+TGG | + | chr8_4:20073576-20073595 | Msa1318150:intron | 30.0% | |
| !!! | TTTGGCATTCTTGTTTTTTC+CGG | + | chr8_4:20073670-20073689 | Msa1318150:CDS | 30.0% |
| ATCAAGTATCATATTTGGCT+TGG | + | chr8_4:20073746-20073765 | Msa1318150:CDS | 30.0% | |
| !! | GAATTTGTTACATCATCCAT+TGG | + | chr8_4:20073801-20073820 | Msa1318150:CDS | 30.0% |
| ATCTACTAATCAAATGTCAG+AGG | + | chr8_4:20073826-20073845 | Msa1318150:CDS | 30.0% | |
| AGTCAAAGCAAAGATCTATA+TGG | - | chr8_4:20074059-20074078 | None:intergenic | 30.0% | |
| TATTAACGCTCTATGAACAA+CGG | + | chr8_4:20074254-20074273 | Msa1318150:intron | 30.0% | |
| ! | TTTTATGTGAATTGGGCTTT+AGG | - | chr8_4:20074360-20074379 | None:intergenic | 30.0% |
| ! | TAGTATTGTATTTAGCTCAC+GGG | + | chr8_4:20074448-20074467 | Msa1318150:intron | 30.0% |
| ! | TCTGCAATGATTTAAAGTCA+TGG | - | chr8_4:20074475-20074494 | None:intergenic | 30.0% |
| AATCATTGCAGATGTTGATA+TGG | + | chr8_4:20074483-20074502 | Msa1318150:intron | 30.0% | |
| CAAATTTGATACTCCAACTT+TGG | - | chr8_4:20074510-20074529 | None:intergenic | 30.0% | |
| ! | CAAAGTTGGAGTATCAAATT+TGG | + | chr8_4:20074508-20074527 | Msa1318150:CDS | 30.0% |
| ! | TTTTCTCCTAATTCTTGGAA+TGG | - | chr8_4:20074579-20074598 | None:intergenic | 30.0% |
| CTACGAGTTCAAATAACTTA+TGG | - | chr8_4:20074938-20074957 | None:intergenic | 30.0% | |
| CATAAGTTATTTGAACTCGT+AGG | + | chr8_4:20074936-20074955 | Msa1318150:intron | 30.0% | |
| ! | GTCCTAATGTGATATGTTTT+TGG | + | chr8_4:20074958-20074977 | Msa1318150:intron | 30.0% |
| TGCCAAAAACATATCACATT+AGG | - | chr8_4:20074963-20074982 | None:intergenic | 30.0% | |
| !!! | TAATGTGATATGTTTTTGGC+AGG | + | chr8_4:20074962-20074981 | Msa1318150:intron | 30.0% |
| !!! | AATGTGATATGTTTTTGGCA+GGG | + | chr8_4:20074963-20074982 | Msa1318150:intron | 30.0% |
| TTTATGAACATCACACTAGT+GGG | - | chr8_4:20075001-20075020 | None:intergenic | 30.0% | |
| ATTTATGAACATCACACTAG+TGG | - | chr8_4:20075002-20075021 | None:intergenic | 30.0% | |
| ATGTAGAGACCTTAAGTAAT+TGG | - | chr8_4:20075218-20075237 | None:intergenic | 30.0% | |
| GAAGAAATTAGGACAATGTT+TGG | - | chr8_4:20075431-20075450 | None:intergenic | 30.0% | |
| TCATCTTCCTTATCATAATC+GGG | + | chr8_4:20075696-20075715 | Msa1318150:CDS | 30.0% | |
| TAATGATCCCGATTATGATA+AGG | - | chr8_4:20075706-20075725 | None:intergenic | 30.0% | |
| TAACACGAATGCAATATTCT+CGG | + | chr8_4:20075754-20075773 | Msa1318150:CDS | 30.0% | |
| AATATTCTCGGATCCTTTAA+GGG | + | chr8_4:20075766-20075785 | Msa1318150:CDS | 30.0% | |
| CACATATTACTAGCATGTTT+AGG | - | chr8_4:20075796-20075815 | None:intergenic | 30.0% | |
| !!! | GATGACTTACTTTTAAGATC+AGG | - | chr8_4:20076016-20076035 | None:intergenic | 30.0% |
| GTGAGGCTCAATCTATAATA+AGG | + | chr8_4:20072187-20072206 | Msa1318150:CDS | 35.0% | |
| TATACCTTGTGCACCAAAAT+AGG | - | chr8_4:20072322-20072341 | None:intergenic | 35.0% | |
| ATGAACGCAAGCATACAAAA+AGG | - | chr8_4:20072380-20072399 | None:intergenic | 35.0% | |
| ! | AGACTGGAAAAGTGTACATA+AGG | - | chr8_4:20072493-20072512 | None:intergenic | 35.0% |
| ! | TTTTGCACAATCAGTCGTAA+TGG | + | chr8_4:20072670-20072689 | Msa1318150:intron | 35.0% |
| TTTGCACAATCAGTCGTAAT+GGG | + | chr8_4:20072671-20072690 | Msa1318150:intron | 35.0% | |
| GTGATAGAAACAATTCCAAG+TGG | - | chr8_4:20072745-20072764 | None:intergenic | 35.0% | |
| TGTTCATTGCACTTCTTGTT+TGG | + | chr8_4:20072785-20072804 | Msa1318150:CDS | 35.0% | |
| TATCGTTGCTAAGTGTTTGA+GGG | - | chr8_4:20072896-20072915 | None:intergenic | 35.0% | |
| ATATCGTTGCTAAGTGTTTG+AGG | - | chr8_4:20072897-20072916 | None:intergenic | 35.0% | |
| ATAGTTGAAGAAACAACGCA+TGG | + | chr8_4:20073397-20073416 | Msa1318150:intron | 35.0% | |
| CAAGAGAAGTTGTATAGTGT+GGG | + | chr8_4:20073617-20073636 | Msa1318150:CDS | 35.0% | |
| AGTTGTATAGTGTGGGAATA+TGG | + | chr8_4:20073624-20073643 | Msa1318150:CDS | 35.0% | |
| TATAGTGTGGGAATATGGTT+AGG | + | chr8_4:20073629-20073648 | Msa1318150:CDS | 35.0% | |
| !! | GAATATGGTTAGGTCTTGTT+GGG | + | chr8_4:20073639-20073658 | Msa1318150:CDS | 35.0% |
| TCTTGTTGGGAACATATGTT+TGG | + | chr8_4:20073652-20073671 | Msa1318150:CDS | 35.0% | |
| TCATCTGTGCTACCAATATT+TGG | + | chr8_4:20073704-20073723 | Msa1318150:CDS | 35.0% | |
| ! | ATGGCAATTTTCACAACTCA+TGG | + | chr8_4:20073779-20073798 | Msa1318150:CDS | 35.0% |
| TTTGATTAGTAGATGCCCAA+TGG | - | chr8_4:20073820-20073839 | None:intergenic | 35.0% | |
| TGCTTACATATCACTCACTA+AGG | - | chr8_4:20074230-20074249 | None:intergenic | 35.0% | |
| ! | TGTTCATAGAGCGTTAATAG+AGG | - | chr8_4:20074253-20074272 | None:intergenic | 35.0% |
| ATGTTGATATGGACCAAAGT+TGG | + | chr8_4:20074494-20074513 | Msa1318150:CDS | 35.0% | |
| TTGCAACCATTCCAAGAATT+AGG | + | chr8_4:20074570-20074589 | Msa1318150:CDS | 35.0% | |
| AGATGATGAAGATTACGTAG+AGG | - | chr8_4:20074631-20074650 | None:intergenic | 35.0% | |
| TCCTAAGGTTCTTACAATCT+AGG | + | chr8_4:20074726-20074745 | Msa1318150:intron | 35.0% | |
| TGTAGAACTCAACTTCTCTA+AGG | + | chr8_4:20074793-20074812 | Msa1318150:intron | 35.0% | |
| GTAGAACTCAACTTCTCTAA+GGG | + | chr8_4:20074794-20074813 | Msa1318150:intron | 35.0% | |
| CTAAGTGTGGTCATTAAATG+TGG | + | chr8_4:20075094-20075113 | Msa1318150:CDS | 35.0% | |
| TCATTAAATGTGGAGGAACT+TGG | + | chr8_4:20075104-20075123 | Msa1318150:CDS | 35.0% | |
| ATATCTGTTGAAGGTCCTTA+TGG | + | chr8_4:20075181-20075200 | Msa1318150:CDS | 35.0% | |
| CTTAAGTAATTGGTTGAAGC+AGG | - | chr8_4:20075208-20075227 | None:intergenic | 35.0% | |
| CTGCTTCAACCAATTACTTA+AGG | + | chr8_4:20075206-20075225 | Msa1318150:CDS | 35.0% | |
| CTTCTGTTTGTTCTTCTATC+AGG | + | chr8_4:20075303-20075322 | Msa1318150:intron | 35.0% | |
| GATTTGATCCTACCAATTTC+TGG | + | chr8_4:20075482-20075501 | Msa1318150:CDS | 35.0% | |
| CATAGCATGTATCAGTTCAT+CGG | - | chr8_4:20075624-20075643 | None:intergenic | 35.0% | |
| GAACTGATACATGCTATGTT+AGG | + | chr8_4:20075626-20075645 | Msa1318150:CDS | 35.0% | |
| GATAAGGAAGATGATGAAAG+AGG | - | chr8_4:20075690-20075709 | None:intergenic | 35.0% | |
| CAATATTCTCGGATCCTTTA+AGG | + | chr8_4:20075765-20075784 | Msa1318150:CDS | 35.0% | |
| ! | TTTCAAGTGTAGCTGTCTTA+TGG | + | chr8_4:20075831-20075850 | Msa1318150:CDS | 35.0% |
| AAACAGATTCAGAACTTGGA+AGG | + | chr8_4:20075878-20075897 | Msa1318150:CDS | 35.0% | |
| AACAGATTCAGAACTTGGAA+GGG | + | chr8_4:20075879-20075898 | Msa1318150:CDS | 35.0% | |
| GCATTGTAAATCGTTGAACT+TGG | - | chr8_4:20075923-20075942 | None:intergenic | 35.0% | |
| CACATTTGTAGCTTCAACAA+GGG | - | chr8_4:20075978-20075997 | None:intergenic | 35.0% | |
| GAAGCTACAAATGTGCATTA+TGG | + | chr8_4:20075983-20076002 | Msa1318150:CDS | 35.0% | |
| AAATGGTTGCCTAAAATCCG+TGG | + | chr8_4:20072282-20072301 | Msa1318150:CDS | 40.0% | |
| ! | AAGGCTGATCCTACCTATTT+TGG | + | chr8_4:20072306-20072325 | Msa1318150:CDS | 40.0% |
| ! | AGTCGTAATGGGAAGAAACA+TGG | + | chr8_4:20072682-20072701 | Msa1318150:intron | 40.0% |
| ! | GTCGTAATGGGAAGAAACAT+GGG | + | chr8_4:20072683-20072702 | Msa1318150:intron | 40.0% |
| AGAAACATGGGACAACCATA+TGG | + | chr8_4:20072695-20072714 | Msa1318150:CDS | 40.0% | |
| AACCGTCCAATGCTTGTAAA+AGG | + | chr8_4:20072718-20072737 | Msa1318150:CDS | 40.0% | |
| !!! | GTCCTTTTACAAGCATTGGA+CGG | - | chr8_4:20072723-20072742 | None:intergenic | 40.0% |
| ! | AGTGGTCCTTTTACAAGCAT+TGG | - | chr8_4:20072727-20072746 | None:intergenic | 40.0% |
| ATGCTTGTAAAAGGACCACT+TGG | + | chr8_4:20072727-20072746 | Msa1318150:CDS | 40.0% | |
| TCAAAAATAGCGGCAGAGTA+CGG | + | chr8_4:20072847-20072866 | Msa1318150:CDS | 40.0% | |
| TAATAGGTACCACAACCACA+TGG | - | chr8_4:20073229-20073248 | None:intergenic | 40.0% | |
| GTGGTTGTGGTACCTATTAA+AGG | + | chr8_4:20073230-20073249 | Msa1318150:intron | 40.0% | |
| TTGCAAACCCAACCGTAATT+AGG | - | chr8_4:20073264-20073283 | None:intergenic | 40.0% | |
| GCAAGAGAAGTTGTATAGTG+TGG | + | chr8_4:20073616-20073635 | Msa1318150:CDS | 40.0% | |
| ! | GGAATATGGTTAGGTCTTGT+TGG | + | chr8_4:20073638-20073657 | Msa1318150:CDS | 40.0% |
| TCAGAAGTGAGGCCAAATAT+TGG | - | chr8_4:20073719-20073738 | None:intergenic | 40.0% | |
| ATATTTGGCCTCACTTCTGA+AGG | + | chr8_4:20073719-20073738 | Msa1318150:CDS | 40.0% | |
| TGATACAACCTTCAGAAGTG+AGG | - | chr8_4:20073730-20073749 | None:intergenic | 40.0% | |
| ! | GACTTCCAGAATGTCTGTTT+TGG | + | chr8_4:20074024-20074043 | Msa1318150:intron | 40.0% |
| !! | TTCCAGAATGTCTGTTTTGG+TGG | + | chr8_4:20074027-20074046 | Msa1318150:intron | 40.0% |
| !!! | TCCAGAATGTCTGTTTTGGT+GGG | + | chr8_4:20074028-20074047 | Msa1318150:intron | 40.0% |
| TTAAATGAGTCCCCCGTAAA+TGG | + | chr8_4:20074079-20074098 | Msa1318150:intron | 40.0% | |
| ! | GATTGGTCACTCGAATAAGT+CGG | + | chr8_4:20074109-20074128 | Msa1318150:intron | 40.0% |
| !! | ATTGGGCTTTAGGCTAACTA+AGG | - | chr8_4:20074350-20074369 | None:intergenic | 40.0% |
| ! | GTTGGAGTATCAAATTTGGC+TGG | + | chr8_4:20074512-20074531 | Msa1318150:CDS | 40.0% |
| CCAAGAAGAGGTAGAAACTA+GGG | - | chr8_4:20074697-20074716 | None:intergenic | 40.0% | |
| ACCAAGAAGAGGTAGAAACT+AGG | - | chr8_4:20074698-20074717 | None:intergenic | 40.0% | |
| TCTTGGTTGATCGTTTCCTA+AGG | + | chr8_4:20074711-20074730 | Msa1318150:CDS | 40.0% | |
| GCCTAGATTGTAAGAACCTT+AGG | - | chr8_4:20074730-20074749 | None:intergenic | 40.0% | |
| ! | TCTCGTATTTTGCCTTGTGA+AGG | + | chr8_4:20074770-20074789 | Msa1318150:intron | 40.0% |
| TTGAGTTCTACACCTTCACA+AGG | - | chr8_4:20074785-20074804 | None:intergenic | 40.0% | |
| ! | CTCAACTTCTCTAAGGGAAA+TGG | + | chr8_4:20074800-20074819 | Msa1318150:intron | 40.0% |
| !! | ATGACCACACTTAGCTTTTC+TGG | - | chr8_4:20075088-20075107 | None:intergenic | 40.0% |
| AGTGTGGTCATTAAATGTGG+AGG | + | chr8_4:20075097-20075116 | Msa1318150:CDS | 40.0% | |
| GATATTCCAAGACGATCGAT+AGG | - | chr8_4:20075166-20075185 | None:intergenic | 40.0% | |
| CGTCTTGGAATATCTGTTGA+AGG | + | chr8_4:20075172-20075191 | Msa1318150:CDS | 40.0% | |
| ATGTCACATGTGCCAGAAAT+TGG | - | chr8_4:20075497-20075516 | None:intergenic | 40.0% | |
| GTGTGATGTATGCCTCAATT+TGG | - | chr8_4:20075535-20075554 | None:intergenic | 40.0% | |
| CATAGAGTTTGGGGATGAAT+TGG | - | chr8_4:20075584-20075603 | None:intergenic | 40.0% | |
| CAATTCATCCCCAAACTCTA+TGG | + | chr8_4:20075582-20075601 | Msa1318150:CDS | 40.0% | |
| ! | ATCAGTTCATCGGATGGATT+TGG | - | chr8_4:20075614-20075633 | None:intergenic | 40.0% |
| CATTCGTGTTATGATCGATC+GGG | - | chr8_4:20075745-20075764 | None:intergenic | 40.0% | |
| GCATTCGTGTTATGATCGAT+CGG | - | chr8_4:20075746-20075765 | None:intergenic | 40.0% | |
| ATGTTTAGGAACGCCCTTAA+AGG | - | chr8_4:20075782-20075801 | None:intergenic | 40.0% | |
| AGCGAAACAGATTCAGAACT+TGG | + | chr8_4:20075874-20075893 | Msa1318150:CDS | 40.0% | |
| GCACATTTGTAGCTTCAACA+AGG | - | chr8_4:20075979-20075998 | None:intergenic | 40.0% | |
| !! | ATTGGTGGTGCTGTTGTTTC+TGG | + | chr8_4:20072212-20072231 | Msa1318150:CDS | 45.0% |
| !! | TTGGTGGTGCTGTTGTTTCT+GGG | + | chr8_4:20072213-20072232 | Msa1318150:CDS | 45.0% |
| CCTTGTGCACCAAAATAGGT+AGG | - | chr8_4:20072318-20072337 | None:intergenic | 45.0% | |
| !!! | CCTACCTATTTTGGTGCACA+AGG | + | chr8_4:20072315-20072334 | Msa1318150:CDS | 45.0% |
| !! | AAGCATTGGACGGTTCCATA+TGG | - | chr8_4:20072713-20072732 | None:intergenic | 45.0% |
| !!! | TTGTTTTTTCCGGTGACACG+TGG | + | chr8_4:20073680-20073699 | Msa1318150:CDS | 45.0% |
| GTAAGTAGGGATCATCGTCT+TGG | - | chr8_4:20073879-20073898 | None:intergenic | 45.0% | |
| AATCTCACCGACCATTTACG+GGG | - | chr8_4:20074093-20074112 | None:intergenic | 45.0% | |
| CAATCTCACCGACCATTTAC+GGG | - | chr8_4:20074094-20074113 | None:intergenic | 45.0% | |
| CCAATCTCACCGACCATTTA+CGG | - | chr8_4:20074095-20074114 | None:intergenic | 45.0% | |
| ! | GTTGAACCGACTTACTTGCA+GGG | - | chr8_4:20074184-20074203 | None:intergenic | 45.0% |
| ! | AGTTGAACCGACTTACTTGC+AGG | - | chr8_4:20074185-20074204 | None:intergenic | 45.0% |
| CAACTTATGCTGCTAGCAGA+AGG | + | chr8_4:20074200-20074219 | Msa1318150:intron | 45.0% | |
| AACGCTCTATGAACAACGGA+AGG | + | chr8_4:20074258-20074277 | Msa1318150:intron | 45.0% | |
| GGAAGGACTTCTTTAGTGAG+TGG | + | chr8_4:20074275-20074294 | Msa1318150:intron | 45.0% | |
| GGAGAGATATCTTTGCTTGC+TGG | + | chr8_4:20074533-20074552 | Msa1318150:CDS | 45.0% | |
| TTGGAATGGTTGCAATCCAC+AGG | - | chr8_4:20074565-20074584 | None:intergenic | 45.0% | |
| ! | AGGGAGCATAGTGAAGGAAA+AGG | - | chr8_4:20074678-20074697 | None:intergenic | 45.0% |
| ! | GAAACTAGGGAGCATAGTGA+AGG | - | chr8_4:20074684-20074703 | None:intergenic | 45.0% |
| CCCTAGTTTCTACCTCTTCT+TGG | + | chr8_4:20074694-20074713 | Msa1318150:CDS | 45.0% | |
| GGAAACGATCAACCAAGAAG+AGG | - | chr8_4:20074709-20074728 | None:intergenic | 45.0% | |
| AGGTTCTTACAATCTAGGCG+CGG | + | chr8_4:20074731-20074750 | Msa1318150:intron | 45.0% | |
| ! | CACTGCAGCTTTGATATGCT+TGG | - | chr8_4:20075028-20075047 | None:intergenic | 45.0% |
| CAAGCATATCAAAGCTGCAG+TGG | + | chr8_4:20075026-20075045 | Msa1318150:intron | 45.0% | |
| GCGAAGGATTTGAAAGCAAC+TGG | - | chr8_4:20075144-20075163 | None:intergenic | 45.0% | |
| TTGGTTGAAGCAGGTCCATA+AGG | - | chr8_4:20075199-20075218 | None:intergenic | 45.0% | |
| CACATGTGCCAGAAATTGGT+AGG | - | chr8_4:20075493-20075512 | None:intergenic | 45.0% | |
| ! | TGGGGATGAATTGGAGTATC+TGG | - | chr8_4:20075575-20075594 | None:intergenic | 45.0% |
| TGGCTTGAGCCATAGAGTTT+GGG | - | chr8_4:20075594-20075613 | None:intergenic | 45.0% | |
| ! | TTGGCTTGAGCCATAGAGTT+TGG | - | chr8_4:20075595-20075614 | None:intergenic | 45.0% |
| GCATGTATCAGTTCATCGGA+TGG | - | chr8_4:20075620-20075639 | None:intergenic | 45.0% | |
| CTATGTTAGGTCCAAACAGC+TGG | + | chr8_4:20075639-20075658 | Msa1318150:CDS | 45.0% | |
| ! | GTTGAACTTGGTGAGACTGT+TGG | - | chr8_4:20075911-20075930 | None:intergenic | 45.0% |
| CAACAAGGGACTGATATGGA+AGG | - | chr8_4:20075964-20075983 | None:intergenic | 45.0% | |
| GCTTCAACAAGGGACTGATA+TGG | - | chr8_4:20075968-20075987 | None:intergenic | 45.0% | |
| !!! | TACATTTTTTTTTTTTAATA+AGG | - | chr8_4:20074388-20074407 | None:intergenic | 5.0% |
| GTTGCCTAAAATCCGTGGCA+AGG | + | chr8_4:20072287-20072306 | Msa1318150:CDS | 50.0% | |
| ! | TCAGCCTTGCCACGGATTTT+AGG | - | chr8_4:20072294-20072313 | None:intergenic | 50.0% |
| ACAGATGATCCACGTGTCAC+CGG | - | chr8_4:20073692-20073711 | None:intergenic | 50.0% | |
| !! | TTGGCTTGGACACATGCTCA+TGG | + | chr8_4:20073760-20073779 | Msa1318150:CDS | 50.0% |
| GCCCACCAAAACAGACATTC+TGG | - | chr8_4:20074032-20074051 | None:intergenic | 50.0% | |
| ATGAGTCCCCCGTAAATGGT+CGG | + | chr8_4:20074083-20074102 | Msa1318150:intron | 50.0% | |
| ATCTCACCGACCATTTACGG+GGG | - | chr8_4:20074092-20074111 | None:intergenic | 50.0% | |
| CCGTAAATGGTCGGTGAGAT+TGG | + | chr8_4:20074092-20074111 | Msa1318150:intron | 50.0% | |
| CCGACTTACTTGCAGGGTAT+GGG | - | chr8_4:20074178-20074197 | None:intergenic | 50.0% | |
| CCCATACCCTGCAAGTAAGT+CGG | + | chr8_4:20074175-20074194 | Msa1318150:intron | 50.0% | |
| ! | ACCGACTTACTTGCAGGGTA+TGG | - | chr8_4:20074179-20074198 | None:intergenic | 50.0% |
| !! | TGCTTGCTGGTTTGTTCCTG+TGG | + | chr8_4:20074546-20074565 | Msa1318150:CDS | 50.0% |
| GGAGCCAGAAAAGCTAAGTG+TGG | + | chr8_4:20075081-20075100 | Msa1318150:CDS | 50.0% | |
| CAGGCATGACACACTTGTGA+TGG | + | chr8_4:20075322-20075341 | Msa1318150:intron | 50.0% | |
| ! | GACACACTTGTGATGGTGAG+TGG | + | chr8_4:20075329-20075348 | Msa1318150:CDS | 50.0% |
| ! | ACACTTGTGATGGTGAGTGG+AGG | + | chr8_4:20075332-20075351 | Msa1318150:CDS | 50.0% |
| GGCTTGAGCCATAGAGTTTG+GGG | - | chr8_4:20075593-20075612 | None:intergenic | 50.0% | |
| ! | TAGGTCCAAACAGCTGGCTT+TGG | + | chr8_4:20075645-20075664 | Msa1318150:CDS | 50.0% |
| AGGTAGGATCAGCCTTGCCA+CGG | - | chr8_4:20072302-20072321 | None:intergenic | 55.0% | |
| CCAAGACGATCGATAGGCGA+AGG | - | chr8_4:20075160-20075179 | None:intergenic | 55.0% | |
| CCTTCGCCTATCGATCGTCT+TGG | + | chr8_4:20075157-20075176 | Msa1318150:CDS | 55.0% | |
| ! | GTGATGGTGAGTGGAGGAAG+TGG | + | chr8_4:20075338-20075357 | Msa1318150:CDS | 55.0% |
| CCAAGCCAAAGCCAGCTGTT+TGG | - | chr8_4:20075653-20075672 | None:intergenic | 55.0% | |
| !! | CCAAACAGCTGGCTTTGGCT+TGG | + | chr8_4:20075650-20075669 | Msa1318150:CDS | 55.0% |
| ATCTAGGCGCGGCGTTCGTT+TGG | + | chr8_4:20074742-20074761 | Msa1318150:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 20072180 | 20076069 | 20072180 | ID=Msa1318150;Name=Msa1318150 |
| chr8_4 | mRNA | 20072180 | 20076069 | 20072180 | ID=Msa1318150-mRNA-1;Parent=Msa1318150;Name=Msa1318150-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0|0|1|1|1|7|0|609 |
| chr8_4 | exon | 20072180 | 20072336 | 20072180 | ID=Msa1318150-mRNA-1:exon:7301;Parent=Msa1318150-mRNA-1 |
| chr8_4 | exon | 20072480 | 20072585 | 20072480 | ID=Msa1318150-mRNA-1:exon:7302;Parent=Msa1318150-mRNA-1 |
| chr8_4 | exon | 20072684 | 20072878 | 20072684 | ID=Msa1318150-mRNA-1:exon:7303;Parent=Msa1318150-mRNA-1 |
| chr8_4 | exon | 20073613 | 20073847 | 20073613 | ID=Msa1318150-mRNA-1:exon:7304;Parent=Msa1318150-mRNA-1 |
| chr8_4 | exon | 20074494 | 20074732 | 20074494 | ID=Msa1318150-mRNA-1:exon:7305;Parent=Msa1318150-mRNA-1 |
| chr8_4 | exon | 20075075 | 20075227 | 20075075 | ID=Msa1318150-mRNA-1:exon:7306;Parent=Msa1318150-mRNA-1 |
| chr8_4 | exon | 20075325 | 20076069 | 20075325 | ID=Msa1318150-mRNA-1:exon:7307;Parent=Msa1318150-mRNA-1 |
| chr8_4 | CDS | 20072180 | 20072336 | 20072180 | ID=Msa1318150-mRNA-1:cds;Parent=Msa1318150-mRNA-1 |
| chr8_4 | CDS | 20072480 | 20072585 | 20072480 | ID=Msa1318150-mRNA-1:cds;Parent=Msa1318150-mRNA-1 |
| chr8_4 | CDS | 20072684 | 20072878 | 20072684 | ID=Msa1318150-mRNA-1:cds;Parent=Msa1318150-mRNA-1 |
| chr8_4 | CDS | 20073613 | 20073847 | 20073613 | ID=Msa1318150-mRNA-1:cds;Parent=Msa1318150-mRNA-1 |
| chr8_4 | CDS | 20074494 | 20074732 | 20074494 | ID=Msa1318150-mRNA-1:cds;Parent=Msa1318150-mRNA-1 |
| chr8_4 | CDS | 20075075 | 20075227 | 20075075 | ID=Msa1318150-mRNA-1:cds;Parent=Msa1318150-mRNA-1 |
| chr8_4 | CDS | 20075325 | 20076069 | 20075325 | ID=Msa1318150-mRNA-1:cds;Parent=Msa1318150-mRNA-1 |
| Gene Sequence |
| Protein sequence |
