AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0261400


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0261400 MtrunA17_Chr2g0323511 86.327 490 62 3 7 495 3 488 0.0 868
Msa0261400 MtrunA17_Chr2g0323471 69.739 499 125 7 6 495 2 483 0.0 666
Msa0261400 MtrunA17_Chr8g0339641 66.598 488 139 11 18 493 1 476 0.0 616
Msa0261400 MtrunA17_Chr7g0219881 42.589 479 243 9 20 489 5 460 7.64e-122 364
Msa0261400 MtrunA17_Chr3g0083761 42.355 484 250 10 20 495 5 467 9.22e-120 359
Msa0261400 MtrunA17_Chr2g0323441 91.954 174 13 1 20 192 2 175 2.80e-111 327
Msa0261400 MtrunA17_Chr3g0087901 36.550 487 272 10 18 492 6 467 3.72e-102 314
Msa0261400 MtrunA17_Chr7g0219331 38.763 485 252 14 16 485 93 547 9.05e-91 287
Msa0261400 MtrunA17_Chr2g0323421 35.091 493 273 14 16 492 51 512 3.41e-87 277
Msa0261400 MtrunA17_Chr2g0323501 35.332 467 260 13 43 492 37 478 9.81e-85 270
Msa0261400 MtrunA17_Chr6g0455361 36.140 487 273 11 14 492 4 460 2.43e-82 263
Msa0261400 MtrunA17_Chr7g0219301 37.708 480 254 15 21 485 5 454 4.04e-81 270
Msa0261400 MtrunA17_Chr7g0219301 33.969 262 145 7 234 485 634 877 6.59e-32 130
Msa0261400 MtrunA17_Chr7g0219301 45.133 113 55 2 25 132 514 624 5.93e-22 99.8
Msa0261400 MtrunA17_Chr3g0124341 35.091 493 268 17 21 490 10 473 1.66e-80 258
Msa0261400 MtrunA17_Chr2g0323481 34.205 459 265 10 47 492 30 464 9.23e-80 256
Msa0261400 MtrunA17_Chr6g0455341 34.504 484 280 11 19 492 7 463 4.72e-77 249
Msa0261400 MtrunA17_Chr7g0219291 33.532 504 281 15 6 491 350 817 2.92e-72 244
Msa0261400 MtrunA17_Chr7g0219291 26.100 341 201 12 152 475 8 314 2.66e-23 103
Msa0261400 MtrunA17_Chr7g0219241 32.577 485 294 12 19 489 8 473 1.30e-71 235
Msa0261400 MtrunA17_Chr6g0454761 32.365 482 279 10 25 493 11 458 5.05e-70 240
Msa0261400 MtrunA17_Chr6g0454761 32.373 451 275 7 47 492 520 945 7.56e-66 229
Msa0261400 MtrunA17_Chr7g0219181 31.936 501 290 14 17 494 5 477 7.03e-69 228
Msa0261400 MtrunA17_Chr7g0219121 30.612 490 292 14 25 489 11 477 2.95e-65 218
Msa0261400 MtrunA17_Chr6g0455351 34.012 491 246 15 14 492 4 428 6.78e-63 211
Msa0261400 MtrunA17_Chr3g0092011 34.615 286 157 11 21 294 4 271 6.57e-43 153
Msa0261400 MtrunA17_Chr7g0219101 27.074 458 265 15 44 489 30 430 6.98e-40 149
Msa0261400 MtrunA17_Chr2g0323491 81.928 83 15 0 413 495 1 83 5.16e-37 131
Msa0261400 MtrunA17_Chr7g0219211 32.180 289 167 8 17 291 6 279 8.53e-32 125
Msa0261400 MtrunA17_Chr7g0219191 36.019 211 117 6 39 244 15 212 3.47e-28 112
Msa0261400 MtrunA17_Chr7g0219221 36.424 151 95 1 340 489 8 158 1.51e-27 108
Msa0261400 MtrunA17_Chr2g0323451 60.465 86 26 2 301 385 1 79 3.82e-27 104
Msa0261400 MtrunA17_Chr7g0219251 38.764 178 95 5 20 193 7 174 2.37e-26 105
Msa0261400 MtrunA17_Chr7g0219341 39.726 146 78 3 345 485 6 146 4.63e-26 103
Msa0261400 MtrunA17_Chr7g0219311 37.857 140 85 2 333 471 6 144 1.96e-24 99.0
Msa0261400 MtrunA17_Chr7g0219351 33.778 225 133 8 89 307 15 229 9.12e-24 99.8
Msa0261400 MtrunA17_Chr2g0323461 86.000 50 7 0 415 464 5 54 1.50e-23 94.0
Msa0261400 MtrunA17_Chr8g0354371 26.144 459 272 15 43 492 30 430 2.08e-21 96.7
Msa0261400 MtrunA17_Chr7g0219201 31.707 205 127 3 288 489 8 202 5.40e-21 91.3
Msa0261400 MtrunA17_Chr4g0010331 23.810 420 274 11 60 474 41 419 7.71e-21 95.1
Msa0261400 MtrunA17_Chr7g0224131 25.000 428 262 14 60 474 41 422 2.59e-18 87.4
Msa0261400 MtrunA17_Chr4g0010311 24.769 432 274 15 19 441 3 392 5.11e-18 86.3
Msa0261400 MtrunA17_Chr4g0053111 23.313 489 309 18 19 485 3 447 1.05e-17 85.5
Msa0261400 MtrunA17_Chr4g0010381 25.424 413 249 15 43 441 24 391 1.50e-17 85.1
Msa0261400 MtrunA17_Chr6g0454741 33.962 159 82 5 91 244 23 163 4.84e-17 80.5
Msa0261400 MtrunA17_Chr4g0010361 23.219 379 255 11 69 441 45 393 5.23e-17 83.2
Msa0261400 MtrunA17_Chr6g0467861 24.603 504 309 18 5 478 32 494 5.66e-17 83.6
Msa0261400 MtrunA17_Chr4g0010121 23.965 459 269 18 37 471 63 465 9.20e-17 82.8
Msa0261400 MtrunA17_Chr3g0087221 23.624 436 296 11 43 471 24 429 1.12e-16 82.4
Msa0261400 MtrunA17_Chr3g0113181 22.096 439 273 13 73 481 60 459 3.46e-16 80.9
Msa0261400 MtrunA17_Chr4g0053061 22.658 459 277 17 39 471 53 459 3.51e-16 80.9
Msa0261400 MtrunA17_Chr7g0253501 22.868 516 310 19 20 497 1 466 6.08e-16 80.1
Msa0261400 MtrunA17_Chr8g0374911 23.460 422 254 18 40 441 47 419 6.93e-16 80.1
Msa0261400 MtrunA17_Chr3g0132001 22.738 409 266 10 78 481 65 428 4.15e-15 77.4
Msa0261400 MtrunA17_Chr3g0092001 34.711 121 76 2 370 490 1 118 4.78e-15 71.6
Msa0261400 MtrunA17_Chr5g0433641 24.599 374 226 13 76 440 62 388 1.75e-14 75.5
Msa0261400 MtrunA17_Chr7g0273731 23.077 377 235 11 78 446 147 476 2.46e-14 75.5
Msa0261400 MtrunA17_Chr8g0386141 24.533 428 255 17 78 493 58 429 2.78e-14 75.1
Msa0261400 MtrunA17_Chr2g0334001 23.129 441 279 19 59 487 39 431 6.86e-14 73.6
Msa0261400 MtrunA17_Chr7g0273791 23.410 393 244 11 56 440 44 387 1.16e-13 73.2
Msa0261400 MtrunA17_Chr7g0273781 23.333 390 242 12 59 440 80 420 1.77e-13 72.8
Msa0261400 MtrunA17_Chr3g0134041 23.661 448 287 17 43 478 30 434 3.90e-13 71.2
Msa0261400 MtrunA17_Chr7g0253531 24.125 514 299 22 20 494 1 462 1.45e-12 69.7
Msa0261400 MtrunA17_Chr7g0273761 20.444 450 300 14 2 440 359 761 8.09e-12 67.8
Msa0261400 MtrunA17_Chr3g0134071 23.773 387 245 16 65 440 56 403 8.56e-12 67.4
Msa0261400 MtrunA17_Chr3g0087401 25.325 308 170 10 162 441 128 403 5.39e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0261400 AT1G03940.1 40.580 483 256 14 21 494 9 469 1.21e-104 321
Msa0261400 AT1G03495.1 40.730 356 182 11 22 371 10 342 1.38e-70 229
Msa0261400 AT5G61160.1 32.653 490 276 14 18 491 1 452 3.52e-66 220
Msa0261400 AT3G29670.1 31.328 482 288 13 18 489 1 449 5.45e-66 220
Msa0261400 AT3G29635.1 31.687 486 292 12 18 492 1 457 1.09e-63 214
Msa0261400 AT3G29680.1 31.601 481 286 12 19 490 2 448 1.45e-60 206
Msa0261400 AT5G39090.1 32.143 476 282 14 19 487 4 445 9.99e-60 203
Msa0261400 AT3G29590.1 31.828 487 273 18 19 490 7 449 8.63e-59 201
Msa0261400 AT5G39050.1 29.719 498 302 13 12 491 2 469 4.60e-56 194
Msa0261400 AT5G39080.1 29.569 487 284 15 19 482 4 454 6.85e-54 188
Msa0261400 AT2G19070.1 23.937 447 283 13 61 487 40 449 2.73e-19 90.9
Msa0261400 AT3G29690.1 32.716 162 97 4 334 491 27 180 2.77e-16 77.4
Msa0261400 AT3G50270.1 24.374 439 265 17 22 441 7 397 1.73e-15 79.0
Msa0261400 AT3G48720.1 21.198 434 284 10 56 481 41 424 3.13e-15 78.2
Msa0261400 AT5G41040.2 21.772 395 255 11 73 458 63 412 1.09e-13 73.6
Msa0261400 AT5G41040.1 21.772 395 255 11 73 458 79 428 1.37e-13 73.2
Msa0261400 AT3G50300.1 24.886 438 264 17 20 441 4 392 1.93e-13 72.8
Msa0261400 AT1G65450.1 25.444 338 204 13 163 489 149 449 2.10e-13 72.8
Msa0261400 AT3G29720.1 30.928 194 112 7 118 307 26 201 7.98e-13 68.2
Msa0261400 AT1G31490.1 22.624 442 258 16 60 474 43 427 5.37e-12 68.2

Find 103 sgRNAs with CRISPR-Local

Find 238 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCATCATTTCATGAAATTT+TGG 0.059044 2_2:-59787626 Msa0261400:CDS
GTCTCATAAACAGCCAATTT+TGG 0.236198 2_2:+59786925 None:intergenic
GCTGTTTATGAGACTGATTT+TGG 0.237069 2_2:-59786916 Msa0261400:CDS
AATCGTTGATGCCTAATTAT+AGG 0.244855 2_2:-59786993 Msa0261400:CDS
ATACGAGGTGGAGGTAAATT+TGG 0.246555 2_2:+59787765 None:intergenic
GGAGGAGTGTTATGGGAATT+TGG 0.249016 2_2:+59787903 None:intergenic
AGTCCAGAAGTTGAAGAAAT+TGG 0.262647 2_2:-59787364 Msa0261400:CDS
TAACCAATTTCTTCAACTTC+TGG 0.264739 2_2:+59787361 None:intergenic
TTAGAGAATTTCCTATAATT+AGG 0.272716 2_2:+59786982 None:intergenic
GTTGGTGATGGAACTAAATT+TGG 0.291404 2_2:+59788110 None:intergenic
GGTTGCTGGTTCACCAAAAT+TGG 0.296365 2_2:-59786938 Msa0261400:CDS
TATCACCTTCATGCTGAATT+TGG 0.301546 2_2:+59788157 None:intergenic
GTGACTTGAATAGCCATTAT+AGG 0.302545 2_2:+59787717 None:intergenic
TTTAAGAATGATGCTTTGTT+AGG 0.320839 2_2:-59787021 Msa0261400:CDS
TTGTAACAAGTTCCTTGATT+TGG 0.331236 2_2:-59787290 Msa0261400:CDS
TTATAGGAAATTCTCTAAAC+CGG 0.347519 2_2:-59786977 Msa0261400:CDS
CATTCGTGTAATCCCTATAA+TGG 0.357080 2_2:-59787730 Msa0261400:CDS
TGACTTGAATAGCCATTATA+GGG 0.360665 2_2:+59787718 None:intergenic
ACGTCTCTTGTAGTGGTTGC+TGG 0.360866 2_2:-59786952 Msa0261400:CDS
AGAAATGGAATCTGCGGGTT+TGG 0.362780 2_2:-59787442 Msa0261400:CDS
TGAACTGCATCAGATTTCTT+AGG 0.374068 2_2:+59786883 None:intergenic
TAGAAGAAGATACGATGAAT+TGG 0.382944 2_2:+59788041 None:intergenic
TATACAAGTTTAAGACCCTT+TGG 0.383445 2_2:+59787495 None:intergenic
GAATGGGAAGTGTTGTTTGT+AGG 0.383915 2_2:+59787991 None:intergenic
AAAGAAGTGTTGGAGGGTTA+AGG 0.387404 2_2:+59787953 None:intergenic
TCTCTTTCTGATTGCAGAGA+TGG 0.388820 2_2:-59786838 Msa0261400:CDS
GGAAAGTGAGTGTTTAAGAA+TGG 0.394305 2_2:+59787974 None:intergenic
ATTCACAAGATGCTCAAAAC+TGG 0.405633 2_2:-59787800 Msa0261400:CDS
GTATGTAAGGAGGAGTGTTA+TGG 0.407860 2_2:+59787895 None:intergenic
ATTTGGAGGGATGATGAGGT+TGG 0.424629 2_2:+59787920 None:intergenic
TATGTAAGGAGGAGTGTTAT+GGG 0.427366 2_2:+59787896 None:intergenic
GATGATGAGGTTGGAGGTGA+AGG 0.429029 2_2:+59787929 None:intergenic
AGATTCTGTATCAAAAGAAA+TGG 0.440390 2_2:-59787457 Msa0261400:CDS
TGGTATGTCGAAGAAAGTTA+AGG 0.445120 2_2:+59788079 None:intergenic
CAGATAGAGAAACCGGAGTT+CGG 0.445819 2_2:+59787687 None:intergenic
CTTTCTGATTGCAGAGATGG+TGG 0.446881 2_2:-59786835 Msa0261400:CDS
GAAAGTGAGTGTTTAAGAAT+GGG 0.453451 2_2:+59787975 None:intergenic
GTAAAGAGAGATGAGTTAGT+TGG 0.455750 2_2:-59787096 Msa0261400:CDS
GGTGGAGGTGGAATTGAGAT+TGG 0.460315 2_2:-59786817 Msa0261400:CDS
AGGTGGAATTGAGATTGGTT+TGG 0.473934 2_2:-59786812 Msa0261400:CDS
GTCACTGTTCTTCCGAACTC+CGG 0.487247 2_2:-59787699 Msa0261400:CDS
GGTATGTCGAAGAAAGTTAA+GGG 0.489263 2_2:+59788080 None:intergenic
AGAAGAAGATACGATGAATT+GGG 0.491688 2_2:+59788042 None:intergenic
GGGAATTTGGAGGGATGATG+AGG 0.494796 2_2:+59787916 None:intergenic
TCATCAAGGTAACGTATGTA+AGG 0.500527 2_2:+59787882 None:intergenic
TGAAGGGAAAGAAGTGTTGG+AGG 0.501627 2_2:+59787946 None:intergenic
ACTGAGGCAGATAGAGAAAC+CGG 0.503828 2_2:+59787680 None:intergenic
GGGATTGTTGTGGCTTCAAA+TGG 0.510486 2_2:-59787066 Msa0261400:CDS
TGTAGCATGCGAATGAACTA+AGG 0.513925 2_2:-59786727 None:intergenic
GTTTGTAGGAAGTGATGAGT+TGG 0.516421 2_2:+59788005 None:intergenic
TACAACCATGTTGCTGCAGA+CGG 0.520564 2_2:-59787657 Msa0261400:CDS
AAGGGGAGAATGGTTGGTGA+TGG 0.521926 2_2:+59788098 None:intergenic
AGGTGAAGGGAAAGAAGTGT+TGG 0.523394 2_2:+59787943 None:intergenic
GGTGATGGAACTAAATTTGG+TGG 0.531792 2_2:+59788113 None:intergenic
ACTCTATTTCTTTCATGTGA+AGG 0.532029 2_2:+59787525 None:intergenic
AGATTGGTTTGGCTCTTGAG+AGG 0.535803 2_2:-59786801 Msa0261400:CDS
GATCATACAAAACCAAATCA+AGG 0.536579 2_2:+59787278 None:intergenic
TTGTATGATCAAATCGGAGG+AGG 0.538608 2_2:-59787265 Msa0261400:CDS
TGAGGATTCAGCGACGGTGA+AGG 0.543996 2_2:+59787848 None:intergenic
TGGAGGGATGATGAGGTTGG+AGG 0.545689 2_2:+59787923 None:intergenic
GGTGATAGCAAAAGTGATCA+AGG 0.548302 2_2:-59787243 Msa0261400:CDS
AAAGTTAAGGGGAGAATGGT+TGG 0.550742 2_2:+59788092 None:intergenic
TCAAAAGAAATGGAATCTGC+GGG 0.555070 2_2:-59787447 Msa0261400:CDS
GGAGGTAAATTTGGAACAAG+AGG 0.560790 2_2:+59787774 None:intergenic
TCGAGATTCTTATGTTAGCA+AGG 0.560871 2_2:-59787418 Msa0261400:CDS
GAAGAAAGTTAAGGGGAGAA+TGG 0.561998 2_2:+59788088 None:intergenic
GATGAGTTGGATGAGGAAAG+TGG 0.563879 2_2:+59788018 None:intergenic
TCTTGTTCTATACGAGGTGG+AGG 0.569390 2_2:+59787756 None:intergenic
ACAACCATGTTGCTGCAGAC+GGG 0.571055 2_2:-59787656 Msa0261400:CDS
ATCAAAAGAAATGGAATCTG+CGG 0.571655 2_2:-59787448 Msa0261400:CDS
AAATAGAGTTAAAGATCCAA+AGG 0.571917 2_2:-59787511 Msa0261400:CDS
ATGATGAGGTTGGAGGTGAA+GGG 0.572297 2_2:+59787930 None:intergenic
ACCGGGTACGTCTCTTGTAG+TGG 0.574375 2_2:-59786959 Msa0261400:CDS
GATTGCAGAGATGGTGGAGG+TGG 0.575491 2_2:-59786829 Msa0261400:CDS
AATAGAGTTAAAGATCCAAA+GGG 0.576796 2_2:-59787510 Msa0261400:CDS
GCAGATTGTCGTGATAGCGT+TGG 0.581739 2_2:-59787174 Msa0261400:CDS
AGGAAGTGATGAGTTGGATG+AGG 0.585446 2_2:+59788011 None:intergenic
GAAGGGAAAGAAGTGTTGGA+GGG 0.591041 2_2:+59787947 None:intergenic
TAACTTTCTTCGACATACCA+TGG 0.593348 2_2:-59788076 Msa0261400:CDS
GAGTGTTATGGGAATTTGGA+GGG 0.596912 2_2:+59787907 None:intergenic
GGAGTGTTATGGGAATTTGG+AGG 0.601515 2_2:+59787906 None:intergenic
AGCAAAAGTGATCAAGGTGA+AGG 0.601720 2_2:-59787237 Msa0261400:CDS
TCTGATTGCAGAGATGGTGG+AGG 0.603040 2_2:-59786832 Msa0261400:CDS
ATTTCCCGTCTGCAGCAACA+TGG 0.605112 2_2:+59787652 None:intergenic
TATAGGAAATTCTCTAAACC+GGG 0.606160 2_2:-59786976 Msa0261400:CDS
TGTATGATCAAATCGGAGGA+GGG 0.608399 2_2:-59787264 Msa0261400:CDS
ATCAGAAAGAGAAATCGAAA+CGG 0.609802 2_2:+59786849 None:intergenic
CGAGACCAAATTCAGCATGA+AGG 0.615814 2_2:-59788162 Msa0261400:CDS
GTCTGCTGAGGATTCAGCGA+CGG 0.615979 2_2:+59787842 None:intergenic
TCATGTGAAGGAAGATCAAG+AGG 0.624288 2_2:+59787537 None:intergenic
TTATCTTGTTCTATACGAGG+TGG 0.627129 2_2:+59787753 None:intergenic
GATGGAACTAAATTTGGTGG+TGG 0.629084 2_2:+59788116 None:intergenic
CAGCAACATGGTTGTAACTG+AGG 0.640682 2_2:+59787664 None:intergenic
TTGTATTGCATCTAATGCTG+TGG 0.648941 2_2:-59787121 Msa0261400:CDS
TCAAGGTAACGTATGTAAGG+AGG 0.651289 2_2:+59787885 None:intergenic
AGGAGATAGAGTCTTCATCA+AGG 0.656629 2_2:+59787868 None:intergenic
ACCACTACAAGAGACGTACC+CGG 0.658474 2_2:+59786958 None:intergenic
GAGAATGTTGAAGTCTGCTG+AGG 0.661878 2_2:+59787830 None:intergenic
GAGGTAAATTTGGAACAAGA+GGG 0.662819 2_2:+59787775 None:intergenic
ATGTTATCTTGTTCTATACG+AGG 0.669004 2_2:+59787750 None:intergenic
GTATGTCGAAGAAAGTTAAG+GGG 0.670105 2_2:+59788081 None:intergenic
TGTGAAGGAAGATCAAGAGG+CGG 0.686663 2_2:+59787540 None:intergenic
ATTGGGTCACAATAAAACCA+TGG 0.688914 2_2:+59788059 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCATCATTTCATGAAATTT+TGG - chr2_2:59787306-59787325 Msa0261400:CDS 20.0%
!!! TCATCATTTCATGAAATTTT+GGG - chr2_2:59787307-59787326 Msa0261400:CDS 20.0%
!!! TTTGTTATTGTTTTTTGCTA+TGG + chr2_2:59787348-59787367 None:intergenic 20.0%
!!! TCATTACCAAAAACTTATTT+TGG - chr2_2:59787785-59787804 Msa0261400:CDS 20.0%
!!! CAATTTCCAAAATAAGTTTT+TGG + chr2_2:59787794-59787813 None:intergenic 20.0%
!! TTAGAGAATTTCCTATAATT+AGG + chr2_2:59787953-59787972 None:intergenic 20.0%
!!! TTCATCATTTCATGAAATTT+TGG - chr2_2:59787306-59787325 Msa0261400:CDS 20.0%
!!! TCATCATTTCATGAAATTTT+GGG - chr2_2:59787307-59787326 Msa0261400:CDS 20.0%
!!! TTTGTTATTGTTTTTTGCTA+TGG + chr2_2:59787348-59787367 None:intergenic 20.0%
!!! TCATTACCAAAAACTTATTT+TGG - chr2_2:59787785-59787804 Msa0261400:CDS 20.0%
!!! CAATTTCCAAAATAAGTTTT+TGG + chr2_2:59787794-59787813 None:intergenic 20.0%
!! TTAGAGAATTTCCTATAATT+AGG + chr2_2:59787953-59787972 None:intergenic 20.0%
! AAATAGAGTTAAAGATCCAA+AGG - chr2_2:59787421-59787440 Msa0261400:CDS 25.0%
! AATAGAGTTAAAGATCCAAA+GGG - chr2_2:59787422-59787441 Msa0261400:CDS 25.0%
! AGATTCTGTATCAAAAGAAA+TGG - chr2_2:59787475-59787494 Msa0261400:CDS 25.0%
!!! TTGGTTTTGTATGATCAAAT+CGG - chr2_2:59787661-59787680 Msa0261400:CDS 25.0%
! ATGAGTTAGTTGGAAAAAAT+GGG - chr2_2:59787846-59787865 Msa0261400:CDS 25.0%
!! TTTAAGAATGATGCTTTGTT+AGG - chr2_2:59787911-59787930 Msa0261400:CDS 25.0%
! TTATAGGAAATTCTCTAAAC+CGG - chr2_2:59787955-59787974 Msa0261400:CDS 25.0%
! AAATAGAGTTAAAGATCCAA+AGG - chr2_2:59787421-59787440 Msa0261400:CDS 25.0%
! AATAGAGTTAAAGATCCAAA+GGG - chr2_2:59787422-59787441 Msa0261400:CDS 25.0%
! AGATTCTGTATCAAAAGAAA+TGG - chr2_2:59787475-59787494 Msa0261400:CDS 25.0%
!!! TTGGTTTTGTATGATCAAAT+CGG - chr2_2:59787661-59787680 Msa0261400:CDS 25.0%
! ATGAGTTAGTTGGAAAAAAT+GGG - chr2_2:59787846-59787865 Msa0261400:CDS 25.0%
!! TTTAAGAATGATGCTTTGTT+AGG - chr2_2:59787911-59787930 Msa0261400:CDS 25.0%
! TTATAGGAAATTCTCTAAAC+CGG - chr2_2:59787955-59787974 Msa0261400:CDS 25.0%
AGAAGAAGATACGATGAATT+GGG + chr2_2:59786893-59786912 None:intergenic 30.0%
TAGAAGAAGATACGATGAAT+TGG + chr2_2:59786894-59786913 None:intergenic 30.0%
GAAAGTGAGTGTTTAAGAAT+GGG + chr2_2:59786960-59786979 None:intergenic 30.0%
ATGTTATCTTGTTCTATACG+AGG + chr2_2:59787185-59787204 None:intergenic 30.0%
TGACTTGAATAGCCATTATA+GGG + chr2_2:59787217-59787236 None:intergenic 30.0%
!! TTTTGCTATGGCTTTTGAAA+GGG + chr2_2:59787336-59787355 None:intergenic 30.0%
!! TTTTTGCTATGGCTTTTGAA+AGG + chr2_2:59787337-59787356 None:intergenic 30.0%
! ACTCTATTTCTTTCATGTGA+AGG + chr2_2:59787410-59787429 None:intergenic 30.0%
! TATACAAGTTTAAGACCCTT+TGG + chr2_2:59787440-59787459 None:intergenic 30.0%
ATCAAAAGAAATGGAATCTG+CGG - chr2_2:59787484-59787503 Msa0261400:CDS 30.0%
TAACCAATTTCTTCAACTTC+TGG + chr2_2:59787574-59787593 None:intergenic 30.0%
TTGTAACAAGTTCCTTGATT+TGG - chr2_2:59787642-59787661 Msa0261400:CDS 30.0%
GATCATACAAAACCAAATCA+AGG + chr2_2:59787657-59787676 None:intergenic 30.0%
GATGAGTTAGTTGGAAAAAA+TGG - chr2_2:59787845-59787864 Msa0261400:CDS 30.0%
AATCGTTGATGCCTAATTAT+AGG - chr2_2:59787939-59787958 Msa0261400:CDS 30.0%
TATAGGAAATTCTCTAAACC+GGG - chr2_2:59787956-59787975 Msa0261400:CDS 30.0%
!! CTGTTTATGAGACTGATTTT+GGG - chr2_2:59788017-59788036 Msa0261400:CDS 30.0%
ATCAGAAAGAGAAATCGAAA+CGG + chr2_2:59788086-59788105 None:intergenic 30.0%
AGAAGAAGATACGATGAATT+GGG + chr2_2:59786893-59786912 None:intergenic 30.0%
TAGAAGAAGATACGATGAAT+TGG + chr2_2:59786894-59786913 None:intergenic 30.0%
GAAAGTGAGTGTTTAAGAAT+GGG + chr2_2:59786960-59786979 None:intergenic 30.0%
ATGTTATCTTGTTCTATACG+AGG + chr2_2:59787185-59787204 None:intergenic 30.0%
TGACTTGAATAGCCATTATA+GGG + chr2_2:59787217-59787236 None:intergenic 30.0%
!! TTTTGCTATGGCTTTTGAAA+GGG + chr2_2:59787336-59787355 None:intergenic 30.0%
!! TTTTTGCTATGGCTTTTGAA+AGG + chr2_2:59787337-59787356 None:intergenic 30.0%
! ACTCTATTTCTTTCATGTGA+AGG + chr2_2:59787410-59787429 None:intergenic 30.0%
! TATACAAGTTTAAGACCCTT+TGG + chr2_2:59787440-59787459 None:intergenic 30.0%
ATCAAAAGAAATGGAATCTG+CGG - chr2_2:59787484-59787503 Msa0261400:CDS 30.0%
TAACCAATTTCTTCAACTTC+TGG + chr2_2:59787574-59787593 None:intergenic 30.0%
TTGTAACAAGTTCCTTGATT+TGG - chr2_2:59787642-59787661 Msa0261400:CDS 30.0%
GATCATACAAAACCAAATCA+AGG + chr2_2:59787657-59787676 None:intergenic 30.0%
GATGAGTTAGTTGGAAAAAA+TGG - chr2_2:59787845-59787864 Msa0261400:CDS 30.0%
AATCGTTGATGCCTAATTAT+AGG - chr2_2:59787939-59787958 Msa0261400:CDS 30.0%
TATAGGAAATTCTCTAAACC+GGG - chr2_2:59787956-59787975 Msa0261400:CDS 30.0%
!! CTGTTTATGAGACTGATTTT+GGG - chr2_2:59788017-59788036 Msa0261400:CDS 30.0%
ATCAGAAAGAGAAATCGAAA+CGG + chr2_2:59788086-59788105 None:intergenic 30.0%
TATCACCTTCATGCTGAATT+TGG + chr2_2:59786778-59786797 None:intergenic 35.0%
!! GTTGGTGATGGAACTAAATT+TGG + chr2_2:59786825-59786844 None:intergenic 35.0%
GTATGTCGAAGAAAGTTAAG+GGG + chr2_2:59786854-59786873 None:intergenic 35.0%
GGTATGTCGAAGAAAGTTAA+GGG + chr2_2:59786855-59786874 None:intergenic 35.0%
TGGTATGTCGAAGAAAGTTA+AGG + chr2_2:59786856-59786875 None:intergenic 35.0%
TAACTTTCTTCGACATACCA+TGG - chr2_2:59786856-59786875 Msa0261400:CDS 35.0%
ATTGGGTCACAATAAAACCA+TGG + chr2_2:59786876-59786895 None:intergenic 35.0%
GGAAAGTGAGTGTTTAAGAA+TGG + chr2_2:59786961-59786980 None:intergenic 35.0%
!! TATGTAAGGAGGAGTGTTAT+GGG + chr2_2:59787039-59787058 None:intergenic 35.0%
TCATCAAGGTAACGTATGTA+AGG + chr2_2:59787053-59787072 None:intergenic 35.0%
ATTCACAAGATGCTCAAAAC+TGG - chr2_2:59787132-59787151 Msa0261400:CDS 35.0%
! GAGGTAAATTTGGAACAAGA+GGG + chr2_2:59787160-59787179 None:intergenic 35.0%
TTATCTTGTTCTATACGAGG+TGG + chr2_2:59787182-59787201 None:intergenic 35.0%
CATTCGTGTAATCCCTATAA+TGG - chr2_2:59787202-59787221 Msa0261400:CDS 35.0%
GTGACTTGAATAGCCATTAT+AGG + chr2_2:59787218-59787237 None:intergenic 35.0%
TCAAAAGAAATGGAATCTGC+GGG - chr2_2:59787485-59787504 Msa0261400:CDS 35.0%
TCGAGATTCTTATGTTAGCA+AGG - chr2_2:59787514-59787533 Msa0261400:CDS 35.0%
AGTCCAGAAGTTGAAGAAAT+TGG - chr2_2:59787568-59787587 Msa0261400:CDS 35.0%
! GTTTTGTATGATCAAATCGG+AGG - chr2_2:59787664-59787683 Msa0261400:CDS 35.0%
TTGTATTGCATCTAATGCTG+TGG - chr2_2:59787811-59787830 Msa0261400:CDS 35.0%
GTAAAGAGAGATGAGTTAGT+TGG - chr2_2:59787836-59787855 Msa0261400:CDS 35.0%
TGGAAAAAATGGGATTGTTG+TGG - chr2_2:59787856-59787875 Msa0261400:CDS 35.0%
! GTCTCATAAACAGCCAATTT+TGG + chr2_2:59788010-59788029 None:intergenic 35.0%
!! GCTGTTTATGAGACTGATTT+TGG - chr2_2:59788016-59788035 Msa0261400:CDS 35.0%
!! TTTATGAGACTGATTTTGGG+TGG - chr2_2:59788020-59788039 Msa0261400:CDS 35.0%
!! TTATGAGACTGATTTTGGGT+GGG - chr2_2:59788021-59788040 Msa0261400:CDS 35.0%
TGAACTGCATCAGATTTCTT+AGG + chr2_2:59788052-59788071 None:intergenic 35.0%
TATCACCTTCATGCTGAATT+TGG + chr2_2:59786778-59786797 None:intergenic 35.0%
!! GTTGGTGATGGAACTAAATT+TGG + chr2_2:59786825-59786844 None:intergenic 35.0%
GTATGTCGAAGAAAGTTAAG+GGG + chr2_2:59786854-59786873 None:intergenic 35.0%
GGTATGTCGAAGAAAGTTAA+GGG + chr2_2:59786855-59786874 None:intergenic 35.0%
TGGTATGTCGAAGAAAGTTA+AGG + chr2_2:59786856-59786875 None:intergenic 35.0%
TAACTTTCTTCGACATACCA+TGG - chr2_2:59786856-59786875 Msa0261400:CDS 35.0%
ATTGGGTCACAATAAAACCA+TGG + chr2_2:59786876-59786895 None:intergenic 35.0%
GGAAAGTGAGTGTTTAAGAA+TGG + chr2_2:59786961-59786980 None:intergenic 35.0%
!! TATGTAAGGAGGAGTGTTAT+GGG + chr2_2:59787039-59787058 None:intergenic 35.0%
TCATCAAGGTAACGTATGTA+AGG + chr2_2:59787053-59787072 None:intergenic 35.0%
ATTCACAAGATGCTCAAAAC+TGG - chr2_2:59787132-59787151 Msa0261400:CDS 35.0%
! GAGGTAAATTTGGAACAAGA+GGG + chr2_2:59787160-59787179 None:intergenic 35.0%
TTATCTTGTTCTATACGAGG+TGG + chr2_2:59787182-59787201 None:intergenic 35.0%
CATTCGTGTAATCCCTATAA+TGG - chr2_2:59787202-59787221 Msa0261400:CDS 35.0%
GTGACTTGAATAGCCATTAT+AGG + chr2_2:59787218-59787237 None:intergenic 35.0%
TCAAAAGAAATGGAATCTGC+GGG - chr2_2:59787485-59787504 Msa0261400:CDS 35.0%
TCGAGATTCTTATGTTAGCA+AGG - chr2_2:59787514-59787533 Msa0261400:CDS 35.0%
AGTCCAGAAGTTGAAGAAAT+TGG - chr2_2:59787568-59787587 Msa0261400:CDS 35.0%
! GTTTTGTATGATCAAATCGG+AGG - chr2_2:59787664-59787683 Msa0261400:CDS 35.0%
TTGTATTGCATCTAATGCTG+TGG - chr2_2:59787811-59787830 Msa0261400:CDS 35.0%
GTAAAGAGAGATGAGTTAGT+TGG - chr2_2:59787836-59787855 Msa0261400:CDS 35.0%
TGGAAAAAATGGGATTGTTG+TGG - chr2_2:59787856-59787875 Msa0261400:CDS 35.0%
! GTCTCATAAACAGCCAATTT+TGG + chr2_2:59788010-59788029 None:intergenic 35.0%
!! GCTGTTTATGAGACTGATTT+TGG - chr2_2:59788016-59788035 Msa0261400:CDS 35.0%
!! TTTATGAGACTGATTTTGGG+TGG - chr2_2:59788020-59788039 Msa0261400:CDS 35.0%
!! TTATGAGACTGATTTTGGGT+GGG - chr2_2:59788021-59788040 Msa0261400:CDS 35.0%
TGAACTGCATCAGATTTCTT+AGG + chr2_2:59788052-59788071 None:intergenic 35.0%
! GATGGAACTAAATTTGGTGG+TGG + chr2_2:59786819-59786838 None:intergenic 40.0%
!! GGTGATGGAACTAAATTTGG+TGG + chr2_2:59786822-59786841 None:intergenic 40.0%
AAAGTTAAGGGGAGAATGGT+TGG + chr2_2:59786843-59786862 None:intergenic 40.0%
GAAGAAAGTTAAGGGGAGAA+TGG + chr2_2:59786847-59786866 None:intergenic 40.0%
GTTTGTAGGAAGTGATGAGT+TGG + chr2_2:59786930-59786949 None:intergenic 40.0%
!! GAATGGGAAGTGTTGTTTGT+AGG + chr2_2:59786944-59786963 None:intergenic 40.0%
!! AAAGAAGTGTTGGAGGGTTA+AGG + chr2_2:59786982-59787001 None:intergenic 40.0%
GAGTGTTATGGGAATTTGGA+GGG + chr2_2:59787028-59787047 None:intergenic 40.0%
!! GTATGTAAGGAGGAGTGTTA+TGG + chr2_2:59787040-59787059 None:intergenic 40.0%
TCAAGGTAACGTATGTAAGG+AGG + chr2_2:59787050-59787069 None:intergenic 40.0%
AGGAGATAGAGTCTTCATCA+AGG + chr2_2:59787067-59787086 None:intergenic 40.0%
! GGAGGTAAATTTGGAACAAG+AGG + chr2_2:59787161-59787180 None:intergenic 40.0%
ATACGAGGTGGAGGTAAATT+TGG + chr2_2:59787170-59787189 None:intergenic 40.0%
TCATGTGAAGGAAGATCAAG+AGG + chr2_2:59787398-59787417 None:intergenic 40.0%
TTGTATGATCAAATCGGAGG+AGG - chr2_2:59787667-59787686 Msa0261400:CDS 40.0%
TGTATGATCAAATCGGAGGA+GGG - chr2_2:59787668-59787687 Msa0261400:CDS 40.0%
GGTGATAGCAAAAGTGATCA+AGG - chr2_2:59787689-59787708 Msa0261400:CDS 40.0%
AGCAAAAGTGATCAAGGTGA+AGG - chr2_2:59787695-59787714 Msa0261400:CDS 40.0%
!! TATGAGACTGATTTTGGGTG+GGG - chr2_2:59788022-59788041 Msa0261400:CDS 40.0%
TCTCTTTCTGATTGCAGAGA+TGG - chr2_2:59788094-59788113 Msa0261400:CDS 40.0%
! AGGTGGAATTGAGATTGGTT+TGG - chr2_2:59788120-59788139 Msa0261400:CDS 40.0%
! GATGGAACTAAATTTGGTGG+TGG + chr2_2:59786819-59786838 None:intergenic 40.0%
!! GGTGATGGAACTAAATTTGG+TGG + chr2_2:59786822-59786841 None:intergenic 40.0%
AAAGTTAAGGGGAGAATGGT+TGG + chr2_2:59786843-59786862 None:intergenic 40.0%
GAAGAAAGTTAAGGGGAGAA+TGG + chr2_2:59786847-59786866 None:intergenic 40.0%
GTTTGTAGGAAGTGATGAGT+TGG + chr2_2:59786930-59786949 None:intergenic 40.0%
!! GAATGGGAAGTGTTGTTTGT+AGG + chr2_2:59786944-59786963 None:intergenic 40.0%
!! AAAGAAGTGTTGGAGGGTTA+AGG + chr2_2:59786982-59787001 None:intergenic 40.0%
GAGTGTTATGGGAATTTGGA+GGG + chr2_2:59787028-59787047 None:intergenic 40.0%
!! GTATGTAAGGAGGAGTGTTA+TGG + chr2_2:59787040-59787059 None:intergenic 40.0%
TCAAGGTAACGTATGTAAGG+AGG + chr2_2:59787050-59787069 None:intergenic 40.0%
AGGAGATAGAGTCTTCATCA+AGG + chr2_2:59787067-59787086 None:intergenic 40.0%
! GGAGGTAAATTTGGAACAAG+AGG + chr2_2:59787161-59787180 None:intergenic 40.0%
ATACGAGGTGGAGGTAAATT+TGG + chr2_2:59787170-59787189 None:intergenic 40.0%
TCATGTGAAGGAAGATCAAG+AGG + chr2_2:59787398-59787417 None:intergenic 40.0%
TTGTATGATCAAATCGGAGG+AGG - chr2_2:59787667-59787686 Msa0261400:CDS 40.0%
TGTATGATCAAATCGGAGGA+GGG - chr2_2:59787668-59787687 Msa0261400:CDS 40.0%
GGTGATAGCAAAAGTGATCA+AGG - chr2_2:59787689-59787708 Msa0261400:CDS 40.0%
AGCAAAAGTGATCAAGGTGA+AGG - chr2_2:59787695-59787714 Msa0261400:CDS 40.0%
!! TATGAGACTGATTTTGGGTG+GGG - chr2_2:59788022-59788041 Msa0261400:CDS 40.0%
TCTCTTTCTGATTGCAGAGA+TGG - chr2_2:59788094-59788113 Msa0261400:CDS 40.0%
! AGGTGGAATTGAGATTGGTT+TGG - chr2_2:59788120-59788139 Msa0261400:CDS 40.0%
CGAGACCAAATTCAGCATGA+AGG - chr2_2:59786770-59786789 Msa0261400:CDS 45.0%
! GATGAGTTGGATGAGGAAAG+TGG + chr2_2:59786917-59786936 None:intergenic 45.0%
! AGGAAGTGATGAGTTGGATG+AGG + chr2_2:59786924-59786943 None:intergenic 45.0%
!! GAAGGGAAAGAAGTGTTGGA+GGG + chr2_2:59786988-59787007 None:intergenic 45.0%
!! TGAAGGGAAAGAAGTGTTGG+AGG + chr2_2:59786989-59787008 None:intergenic 45.0%
! AGGTGAAGGGAAAGAAGTGT+TGG + chr2_2:59786992-59787011 None:intergenic 45.0%
ATGATGAGGTTGGAGGTGAA+GGG + chr2_2:59787005-59787024 None:intergenic 45.0%
ATTTGGAGGGATGATGAGGT+TGG + chr2_2:59787015-59787034 None:intergenic 45.0%
! GGAGTGTTATGGGAATTTGG+AGG + chr2_2:59787029-59787048 None:intergenic 45.0%
!! GGAGGAGTGTTATGGGAATT+TGG + chr2_2:59787032-59787051 None:intergenic 45.0%
GAGAATGTTGAAGTCTGCTG+AGG + chr2_2:59787105-59787124 None:intergenic 45.0%
TCTTGTTCTATACGAGGTGG+AGG + chr2_2:59787179-59787198 None:intergenic 45.0%
CAGATAGAGAAACCGGAGTT+CGG + chr2_2:59787248-59787267 None:intergenic 45.0%
ACTGAGGCAGATAGAGAAAC+CGG + chr2_2:59787255-59787274 None:intergenic 45.0%
CAGCAACATGGTTGTAACTG+AGG + chr2_2:59787271-59787290 None:intergenic 45.0%
TACAACCATGTTGCTGCAGA+CGG - chr2_2:59787275-59787294 Msa0261400:CDS 45.0%
!! TGCTATGGCTTTTGAAAGGG+AGG + chr2_2:59787333-59787352 None:intergenic 45.0%
TGTGAAGGAAGATCAAGAGG+CGG + chr2_2:59787395-59787414 None:intergenic 45.0%
AGAAATGGAATCTGCGGGTT+TGG - chr2_2:59787490-59787509 Msa0261400:CDS 45.0%
GGGATTGTTGTGGCTTCAAA+TGG - chr2_2:59787866-59787885 Msa0261400:CDS 45.0%
!! GGTTGCTGGTTCACCAAAAT+TGG - chr2_2:59787994-59788013 Msa0261400:CDS 45.0%
!! ATGAGACTGATTTTGGGTGG+GGG - chr2_2:59788023-59788042 Msa0261400:CDS 45.0%
CTTTCTGATTGCAGAGATGG+TGG - chr2_2:59788097-59788116 Msa0261400:CDS 45.0%
!! AGATTGGTTTGGCTCTTGAG+AGG - chr2_2:59788131-59788150 Msa0261400:CDS 45.0%
CGAGACCAAATTCAGCATGA+AGG - chr2_2:59786770-59786789 Msa0261400:CDS 45.0%
! GATGAGTTGGATGAGGAAAG+TGG + chr2_2:59786917-59786936 None:intergenic 45.0%
! AGGAAGTGATGAGTTGGATG+AGG + chr2_2:59786924-59786943 None:intergenic 45.0%
!! GAAGGGAAAGAAGTGTTGGA+GGG + chr2_2:59786988-59787007 None:intergenic 45.0%
!! TGAAGGGAAAGAAGTGTTGG+AGG + chr2_2:59786989-59787008 None:intergenic 45.0%
! AGGTGAAGGGAAAGAAGTGT+TGG + chr2_2:59786992-59787011 None:intergenic 45.0%
ATGATGAGGTTGGAGGTGAA+GGG + chr2_2:59787005-59787024 None:intergenic 45.0%
ATTTGGAGGGATGATGAGGT+TGG + chr2_2:59787015-59787034 None:intergenic 45.0%
! GGAGTGTTATGGGAATTTGG+AGG + chr2_2:59787029-59787048 None:intergenic 45.0%
!! GGAGGAGTGTTATGGGAATT+TGG + chr2_2:59787032-59787051 None:intergenic 45.0%
GAGAATGTTGAAGTCTGCTG+AGG + chr2_2:59787105-59787124 None:intergenic 45.0%
TCTTGTTCTATACGAGGTGG+AGG + chr2_2:59787179-59787198 None:intergenic 45.0%
CAGATAGAGAAACCGGAGTT+CGG + chr2_2:59787248-59787267 None:intergenic 45.0%
ACTGAGGCAGATAGAGAAAC+CGG + chr2_2:59787255-59787274 None:intergenic 45.0%
CAGCAACATGGTTGTAACTG+AGG + chr2_2:59787271-59787290 None:intergenic 45.0%
TACAACCATGTTGCTGCAGA+CGG - chr2_2:59787275-59787294 Msa0261400:CDS 45.0%
!! TGCTATGGCTTTTGAAAGGG+AGG + chr2_2:59787333-59787352 None:intergenic 45.0%
TGTGAAGGAAGATCAAGAGG+CGG + chr2_2:59787395-59787414 None:intergenic 45.0%
AGAAATGGAATCTGCGGGTT+TGG - chr2_2:59787490-59787509 Msa0261400:CDS 45.0%
GGGATTGTTGTGGCTTCAAA+TGG - chr2_2:59787866-59787885 Msa0261400:CDS 45.0%
!! GGTTGCTGGTTCACCAAAAT+TGG - chr2_2:59787994-59788013 Msa0261400:CDS 45.0%
!! ATGAGACTGATTTTGGGTGG+GGG - chr2_2:59788023-59788042 Msa0261400:CDS 45.0%
CTTTCTGATTGCAGAGATGG+TGG - chr2_2:59788097-59788116 Msa0261400:CDS 45.0%
!! AGATTGGTTTGGCTCTTGAG+AGG - chr2_2:59788131-59788150 Msa0261400:CDS 45.0%
!! AAGGGGAGAATGGTTGGTGA+TGG + chr2_2:59786837-59786856 None:intergenic 50.0%
GATGATGAGGTTGGAGGTGA+AGG + chr2_2:59787006-59787025 None:intergenic 50.0%
GGGAATTTGGAGGGATGATG+AGG + chr2_2:59787019-59787038 None:intergenic 50.0%
GTCACTGTTCTTCCGAACTC+CGG - chr2_2:59787233-59787252 Msa0261400:CDS 50.0%
ACAACCATGTTGCTGCAGAC+GGG - chr2_2:59787276-59787295 Msa0261400:CDS 50.0%
ATTTCCCGTCTGCAGCAACA+TGG + chr2_2:59787283-59787302 None:intergenic 50.0%
! GCAGATTGTCGTGATAGCGT+TGG - chr2_2:59787758-59787777 Msa0261400:CDS 50.0%
ACCACTACAAGAGACGTACC+CGG + chr2_2:59787977-59787996 None:intergenic 50.0%
ACGTCTCTTGTAGTGGTTGC+TGG - chr2_2:59787980-59787999 Msa0261400:CDS 50.0%
! TCTGATTGCAGAGATGGTGG+AGG - chr2_2:59788100-59788119 Msa0261400:CDS 50.0%
GGTGGAGGTGGAATTGAGAT+TGG - chr2_2:59788115-59788134 Msa0261400:CDS 50.0%
!! AAGGGGAGAATGGTTGGTGA+TGG + chr2_2:59786837-59786856 None:intergenic 50.0%
GATGATGAGGTTGGAGGTGA+AGG + chr2_2:59787006-59787025 None:intergenic 50.0%
GGGAATTTGGAGGGATGATG+AGG + chr2_2:59787019-59787038 None:intergenic 50.0%
GTCACTGTTCTTCCGAACTC+CGG - chr2_2:59787233-59787252 Msa0261400:CDS 50.0%
ACAACCATGTTGCTGCAGAC+GGG - chr2_2:59787276-59787295 Msa0261400:CDS 50.0%
ATTTCCCGTCTGCAGCAACA+TGG + chr2_2:59787283-59787302 None:intergenic 50.0%
! GCAGATTGTCGTGATAGCGT+TGG - chr2_2:59787758-59787777 Msa0261400:CDS 50.0%
ACCACTACAAGAGACGTACC+CGG + chr2_2:59787977-59787996 None:intergenic 50.0%
ACGTCTCTTGTAGTGGTTGC+TGG - chr2_2:59787980-59787999 Msa0261400:CDS 50.0%
! TCTGATTGCAGAGATGGTGG+AGG - chr2_2:59788100-59788119 Msa0261400:CDS 50.0%
GGTGGAGGTGGAATTGAGAT+TGG - chr2_2:59788115-59788134 Msa0261400:CDS 50.0%
TGGAGGGATGATGAGGTTGG+AGG + chr2_2:59787012-59787031 None:intergenic 55.0%
TGAGGATTCAGCGACGGTGA+AGG + chr2_2:59787087-59787106 None:intergenic 55.0%
GTCTGCTGAGGATTCAGCGA+CGG + chr2_2:59787093-59787112 None:intergenic 55.0%
ACCGGGTACGTCTCTTGTAG+TGG - chr2_2:59787973-59787992 Msa0261400:CDS 55.0%
!! GATTGCAGAGATGGTGGAGG+TGG - chr2_2:59788103-59788122 Msa0261400:CDS 55.0%
TGGAGGGATGATGAGGTTGG+AGG + chr2_2:59787012-59787031 None:intergenic 55.0%
TGAGGATTCAGCGACGGTGA+AGG + chr2_2:59787087-59787106 None:intergenic 55.0%
GTCTGCTGAGGATTCAGCGA+CGG + chr2_2:59787093-59787112 None:intergenic 55.0%
ACCGGGTACGTCTCTTGTAG+TGG - chr2_2:59787973-59787992 Msa0261400:CDS 55.0%
!! GATTGCAGAGATGGTGGAGG+TGG - chr2_2:59788103-59788122 Msa0261400:CDS 55.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 59786729 59788225 59786729 ID=Msa0261400;Name=Msa0261400
chr2_2 mRNA 59786729 59788225 59786729 ID=Msa0261400-mRNA-1;Parent=Msa0261400;Name=Msa0261400-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|-1|0|1|-1|1|1|0|498
chr2_2 exon 59786729 59788225 59786729 ID=Msa0261400-mRNA-1:exon:18396;Parent=Msa0261400-mRNA-1
chr2_2 CDS 59786729 59788225 59786729 ID=Msa0261400-mRNA-1:cds;Parent=Msa0261400-mRNA-1
Gene Sequence

>Msa0261400

ATGAACATCACAAACACAAACACAAACACAAACATAACTCACGAGACCAAATTCAGCATGAAGGTGATAGAACATAGTCAAGTTGCACCACCACCAAATTTAGTTCCATCACCAACCATTCTCCCCTTAACTTTCTTCGACATACCATGGTTTTATTGTGACCCAATTCATCGTATCTTCTTCTACCACTTTCCTCATCCAACTCATCACTTCCTACAAACAACACTTCCCATTCTTAAACACTCACTTTCCTTAACCCTCCAACACTTCTTTCCCTTCACCTCCAACCTCATCATCCCTCCAAATTCCCATAACACTCCTCCTTACATACGTTACCTTGATGAAGACTCTATCTCCTTCACCGTCGCTGAATCCTCAGCAGACTTCAACATTCTCGTATCTGATTCACAAGATGCTCAAAACTGGCACCCTCTTGTTCCAAATTTACCTCCACCTCGTATAGAACAAGATAACATTCGTGTAATCCCTATAATGGCTATTCAAGTCACTGTTCTTCCGAACTCCGGTTTCTCTATCTGCCTCAGTTACAACCATGTTGCTGCAGACGGGAAATCACTTCATCATTTCATGAAATTTTGGGCCTCCCTTTCAAAAGCCATAGCAAAAAACAATAACAAAAATAATTTGTCTCTTGAATACTCTCCGCCTCTTGATCTTCCTTCACATGAAAGAAATAGAGTTAAAGATCCAAAGGGTCTTAAACTTGTATACTTGCAACAATTAGAAGATTCTGTATCAAAAGAAATGGAATCTGCGGGTTTGGTTCGAGATTCTTATGTTAGCAAGGTACGAACAACTTTGATATTGAGCTATGAACAAGTCCAGAAGTTGAAGAAATTGGTTACTGATAAATGTAAAGATAGTGAAAGAATAAAACACTTGTCTACTTTTGTTGTAACAAGTTCCTTGATTTGGTTTTGTATGATCAAATCGGAGGAGGGTGATAGCAAAAGTGATCAAGGTGAAGGTGATTGTGTTGTTGATGATAACTGCTACTTTGTGATTCTTGCAGATTGTCGTGATAGCGTTGGATTTTCATTACCAAAAACTTATTTTGGAAATTGTATTGCATCTAATGCTGTGGCTGTAAAGAGAGATGAGTTAGTTGGAAAAAATGGGATTGTTGTGGCTTCAAATGGTATTGAAAAGAAGATAAGAGATTTTAAGAATGATGCTTTGTTAGGAGCTGAATCGTTGATGCCTAATTATAGGAAATTCTCTAAACCGGGTACGTCTCTTGTAGTGGTTGCTGGTTCACCAAAATTGGCTGTTTATGAGACTGATTTTGGGTGGGGGAAGCCTAAGAAATCTGATGCAGTTCATCTTGATTCGTCCGTTTCGATTTCTCTTTCTGATTGCAGAGATGGTGGAGGTGGAATTGAGATTGGTTTGGCTCTTGAGAGGTCTAGAATGACTAATTTCATATACATCTTTCAAGAACGACTTGATAACATTTGTAGCATGCGAATGAACTAA

Protein sequence

>Msa0261400

MNITNTNTNTNITHETKFSMKVIEHSQVAPPPNLVPSPTILPLTFFDIPWFYCDPIHRIFFYHFPHPTHHFLQTTLPILKHSLSLTLQHFFPFTSNLIIPPNSHNTPPYIRYLDEDSISFTVAESSADFNILVSDSQDAQNWHPLVPNLPPPRIEQDNIRVIPIMAIQVTVLPNSGFSICLSYNHVAADGKSLHHFMKFWASLSKAIAKNNNKNNLSLEYSPPLDLPSHERNRVKDPKGLKLVYLQQLEDSVSKEMESAGLVRDSYVSKVRTTLILSYEQVQKLKKLVTDKCKDSERIKHLSTFVVTSSLIWFCMIKSEEGDSKSDQGEGDCVVDDNCYFVILADCRDSVGFSLPKTYFGNCIASNAVAVKRDELVGKNGIVVASNGIEKKIRDFKNDALLGAESLMPNYRKFSKPGTSLVVVAGSPKLAVYETDFGWGKPKKSDAVHLDSSVSISLSDCRDGGGGIEIGLALERSRMTNFIYIFQERLDNICSMRMN*