AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0777060


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0777060 MtrunA17_Chr5g0432341 95.527 313 11 1 1 310 1 313 0.0 614
Msa0777060 MtrunA17_Chr5g0432341 78.431 306 32 1 310 581 18 323 5.35e-175 498
Msa0777060 MtrunA17_Chr5g0432351 91.950 323 23 1 1 320 1 323 0.0 609
Msa0777060 MtrunA17_Chr5g0432351 78.361 305 32 1 310 580 18 322 5.90e-175 498
Msa0777060 MtrunA17_Chr5g0432331 85.942 313 41 1 1 310 32 344 0.0 564
Msa0777060 MtrunA17_Chr5g0432331 75.499 351 39 3 266 581 16 354 0.0 524
Msa0777060 MtrunA17_Chr3g0107881 63.009 319 113 2 4 317 5 323 5.27e-137 401
Msa0777060 MtrunA17_Chr3g0107881 58.000 300 91 2 315 579 25 324 2.23e-113 340
Msa0777060 MtrunA17_Chr5g0432401 61.613 310 77 2 4 310 8 278 2.12e-127 375
Msa0777060 MtrunA17_Chr5g0432401 53.488 301 67 2 312 578 24 285 6.41e-102 310
Msa0777060 MtrunA17_Chr4g0013171 59.621 317 117 5 1 310 1 313 1.49e-122 364
Msa0777060 MtrunA17_Chr4g0013171 54.426 305 99 5 311 579 21 321 5.60e-101 308
Msa0777060 MtrunA17_Chr4g0013181 63.889 288 95 5 28 310 62 345 3.56e-117 351
Msa0777060 MtrunA17_Chr4g0013181 55.405 296 92 5 320 579 62 353 5.34e-98 302
Msa0777060 MtrunA17_Chr5g0432441 55.414 314 127 7 5 310 10 318 9.08e-111 334
Msa0777060 MtrunA17_Chr5g0432441 51.299 308 108 7 310 579 23 326 1.25e-94 292
Msa0777060 MtrunA17_Chr4g0013201 55.369 298 124 5 17 310 38 330 1.40e-105 321
Msa0777060 MtrunA17_Chr4g0013201 46.865 303 123 5 311 579 40 338 4.31e-84 266
Msa0777060 MtrunA17_Chr2g0320071 53.185 314 138 6 1 310 1 309 1.54e-105 320
Msa0777060 MtrunA17_Chr2g0320071 49.000 300 117 5 313 579 21 317 3.45e-86 270
Msa0777060 MtrunA17_Chr3g0106921 52.665 319 138 8 6 317 7 319 1.55e-105 320
Msa0777060 MtrunA17_Chr3g0106921 49.186 307 115 7 310 579 18 320 1.40e-88 276
Msa0777060 MtrunA17_Chr2g0320061 54.545 308 130 6 9 310 7 310 1.20e-104 318
Msa0777060 MtrunA17_Chr2g0320061 49.333 300 117 4 313 579 21 318 2.34e-85 268
Msa0777060 MtrunA17_Chr5g0438021 53.165 316 136 6 1 310 8 317 6.70e-104 316
Msa0777060 MtrunA17_Chr5g0438021 49.502 301 112 5 315 579 29 325 7.61e-88 275
Msa0777060 MtrunA17_Chr2g0320051 56.122 294 121 5 21 310 21 310 8.08e-104 316
Msa0777060 MtrunA17_Chr2g0320051 49.000 300 118 4 313 579 21 318 2.28e-84 266
Msa0777060 MtrunA17_Chr2g0320031 52.381 315 141 6 1 310 1 311 2.51e-103 315
Msa0777060 MtrunA17_Chr2g0320031 47.826 299 119 4 315 579 24 319 9.58e-83 261
Msa0777060 MtrunA17_Chr3g0114451 53.312 317 137 6 7 317 6 317 6.13e-103 313
Msa0777060 MtrunA17_Chr3g0114451 48.993 298 114 4 316 579 25 318 9.33e-87 272
Msa0777060 MtrunA17_Chr3g0129051 53.185 314 135 6 3 310 7 314 6.78e-103 313
Msa0777060 MtrunA17_Chr3g0129051 48.837 301 114 5 315 579 26 322 1.07e-86 272
Msa0777060 MtrunA17_Chr2g0320101 54.545 308 129 7 9 310 7 309 2.23e-102 312
Msa0777060 MtrunA17_Chr2g0320101 48.333 300 119 5 313 579 21 317 5.11e-83 262
Msa0777060 MtrunA17_Chr1g0213061 52.903 310 134 8 7 310 10 313 1.09e-100 308
Msa0777060 MtrunA17_Chr1g0213061 47.855 303 118 5 313 579 23 321 7.24e-86 270
Msa0777060 MtrunA17_Chr7g0244451 53.185 314 137 6 1 310 1 308 2.34e-99 304
Msa0777060 MtrunA17_Chr7g0244451 46.823 299 121 4 315 579 22 316 4.78e-79 252
Msa0777060 MtrunA17_Chr4g0043391 50.000 312 144 6 7 310 9 316 1.06e-97 300
Msa0777060 MtrunA17_Chr4g0043391 46.026 302 124 6 315 579 25 324 6.54e-81 257
Msa0777060 MtrunA17_Chr7g0244461 51.475 305 136 6 10 310 8 304 1.20e-97 300
Msa0777060 MtrunA17_Chr7g0244461 46.823 299 121 4 315 579 18 312 4.85e-83 262
Msa0777060 MtrunA17_Chr2g0320091 52.475 303 132 7 14 310 14 310 1.71e-97 300
Msa0777060 MtrunA17_Chr2g0320091 47.351 302 120 6 313 579 21 318 1.03e-80 256
Msa0777060 MtrunA17_Chr3g0129061 53.205 312 131 6 5 310 12 314 6.58e-97 298
Msa0777060 MtrunA17_Chr3g0129061 47.841 301 117 5 315 579 26 322 9.60e-86 269
Msa0777060 MtrunA17_Chr4g0013191 52.203 295 129 7 23 310 43 332 2.56e-96 297
Msa0777060 MtrunA17_Chr4g0013191 44.201 319 130 7 297 579 34 340 4.13e-79 253
Msa0777060 MtrunA17_Chr3g0129041 52.866 314 136 6 3 310 7 314 8.97e-96 295
Msa0777060 MtrunA17_Chr3g0129041 48.837 301 114 5 315 579 26 322 3.51e-86 270
Msa0777060 MtrunA17_Chr4g0038171 50.162 309 142 6 10 310 9 313 1.05e-95 295
Msa0777060 MtrunA17_Chr4g0038171 45.364 302 126 6 315 579 22 321 3.76e-79 252
Msa0777060 MtrunA17_Chr3g0106901 51.118 313 144 5 9 317 15 322 4.55e-93 288
Msa0777060 MtrunA17_Chr3g0106901 49.164 299 114 4 315 579 29 323 2.02e-89 279
Msa0777060 MtrunA17_Chr7g0224371 49.026 308 148 7 7 310 12 314 1.67e-92 287
Msa0777060 MtrunA17_Chr7g0224371 43.750 320 141 6 294 579 8 322 1.13e-77 248
Msa0777060 MtrunA17_Chr5g0404721 49.671 304 138 5 25 317 30 329 8.44e-91 283
Msa0777060 MtrunA17_Chr5g0404721 47.525 303 117 5 317 579 30 330 3.01e-80 255
Msa0777060 MtrunA17_Chr4g0038161 48.243 313 146 8 6 310 8 312 3.83e-90 281
Msa0777060 MtrunA17_Chr4g0038161 43.709 302 130 6 315 579 22 320 2.91e-74 239
Msa0777060 MtrunA17_Chr4g0038151 48.243 313 147 7 6 310 8 313 2.34e-89 278
Msa0777060 MtrunA17_Chr4g0038151 43.709 302 130 6 315 579 23 321 2.84e-73 237
Msa0777060 MtrunA17_Chr8g0372601 49.832 297 134 5 25 310 30 322 3.09e-88 276
Msa0777060 MtrunA17_Chr8g0372601 45.545 303 123 5 317 579 30 330 1.18e-76 246
Msa0777060 MtrunA17_Chr2g0291751 48.710 310 145 6 12 310 16 322 2.90e-87 275
Msa0777060 MtrunA17_Chr2g0291751 43.137 306 133 4 315 580 27 331 4.33e-73 238
Msa0777060 MtrunA17_Chr2g0292091 46.667 315 153 6 8 310 6 317 3.02e-86 271
Msa0777060 MtrunA17_Chr2g0292091 42.951 305 133 4 315 579 22 325 1.79e-75 243
Msa0777060 MtrunA17_Chr4g0070951 50.831 301 130 7 23 310 26 321 2.23e-85 269
Msa0777060 MtrunA17_Chr4g0070951 42.532 308 132 6 315 580 26 330 7.73e-68 223
Msa0777060 MtrunA17_Chr7g0258811 44.620 316 160 5 7 310 51 363 7.63e-85 269
Msa0777060 MtrunA17_Chr7g0258811 39.550 311 146 5 310 579 62 371 2.26e-67 223
Msa0777060 MtrunA17_Chr1g0175561 43.168 322 166 6 1 310 2 318 5.68e-84 265
Msa0777060 MtrunA17_Chr1g0175561 39.806 309 144 5 312 579 19 326 6.35e-68 223
Msa0777060 MtrunA17_Chr1g0155611 48.148 297 140 5 25 310 46 339 7.77e-84 265
Msa0777060 MtrunA17_Chr1g0155611 41.914 303 135 4 317 579 46 347 5.17e-68 224
Msa0777060 MtrunA17_Chr2g0292211 44.479 317 162 4 5 310 20 333 5.41e-83 263
Msa0777060 MtrunA17_Chr2g0292211 40.391 307 144 3 312 579 35 341 1.36e-66 221
Msa0777060 MtrunA17_Chr2g0299691 47.249 309 144 8 16 310 47 350 2.45e-82 262
Msa0777060 MtrunA17_Chr2g0299691 42.122 311 134 6 312 579 51 358 2.30e-67 223
Msa0777060 MtrunA17_Chr2g0292181 48.161 299 141 6 23 310 36 331 2.43e-81 259
Msa0777060 MtrunA17_Chr2g0292181 43.934 305 130 4 315 579 36 339 6.81e-72 234
Msa0777060 MtrunA17_Chr2g0292251 46.667 300 144 6 23 310 26 321 1.88e-80 257
Msa0777060 MtrunA17_Chr2g0292251 41.639 305 137 4 315 579 26 329 8.50e-67 221
Msa0777060 MtrunA17_Chr5g0402571 47.785 316 145 10 9 310 9 318 8.16e-80 254
Msa0777060 MtrunA17_Chr5g0402571 44.051 311 130 9 310 579 19 326 1.51e-66 219
Msa0777060 MtrunA17_Chr2g0292241 44.654 318 160 6 5 310 9 322 1.31e-79 254
Msa0777060 MtrunA17_Chr2g0292241 41.311 305 138 4 315 579 27 330 4.98e-66 219
Msa0777060 MtrunA17_Chr2g0292101 46.226 318 156 8 5 310 4 318 1.66e-79 254
Msa0777060 MtrunA17_Chr2g0292101 41.639 305 137 4 315 579 23 326 7.64e-67 221
Msa0777060 MtrunA17_Chr4g0013821 44.025 318 161 6 3 310 6 316 1.01e-78 252
Msa0777060 MtrunA17_Chr4g0013821 40.196 306 139 5 313 579 24 324 9.03e-62 207
Msa0777060 MtrunA17_Chr2g0292111 44.695 311 158 5 11 310 15 322 1.64e-78 251
Msa0777060 MtrunA17_Chr2g0292111 42.157 306 136 4 315 580 27 331 2.36e-68 225
Msa0777060 MtrunA17_Chr5g0402581 46.519 316 149 10 9 310 9 318 1.99e-78 250
Msa0777060 MtrunA17_Chr5g0402581 44.051 311 130 9 310 579 19 326 5.14e-66 218
Msa0777060 MtrunA17_Chr2g0292271 43.260 319 167 4 3 310 7 322 2.69e-78 251
Msa0777060 MtrunA17_Chr2g0292271 40.656 305 140 4 315 579 27 330 7.70e-67 221
Msa0777060 MtrunA17_Chr4g0068621 46.512 301 144 7 21 310 34 328 5.83e-78 249
Msa0777060 MtrunA17_Chr4g0068621 40.000 310 146 5 308 579 29 336 4.56e-65 216
Msa0777060 MtrunA17_Chr4g0013721 45.425 306 144 7 18 310 93 388 2.26e-77 251
Msa0777060 MtrunA17_Chr4g0013721 40.453 309 140 5 310 579 93 396 2.78e-62 211
Msa0777060 MtrunA17_Chr2g0292291 45.333 300 149 5 23 310 28 324 9.29e-76 244
Msa0777060 MtrunA17_Chr2g0292291 39.739 307 145 5 315 581 28 334 2.64e-62 209
Msa0777060 MtrunA17_Chr5g0400331 46.689 302 141 7 25 310 26 323 1.03e-75 244
Msa0777060 MtrunA17_Chr5g0400331 42.208 308 131 6 317 579 26 331 1.55e-64 214
Msa0777060 MtrunA17_Chr2g0292151 44.695 311 158 6 11 310 15 322 3.60e-75 243
Msa0777060 MtrunA17_Chr2g0292151 41.503 306 138 4 315 580 27 331 3.72e-66 219
Msa0777060 MtrunA17_Chr2g0292261 43.813 299 154 4 23 310 27 322 3.43e-74 240
Msa0777060 MtrunA17_Chr2g0292261 39.344 305 144 4 315 579 27 330 8.53e-60 202
Msa0777060 MtrunA17_Chr5g0421411 48.496 266 121 6 48 300 4 266 1.16e-72 234
Msa0777060 MtrunA17_Chr5g0421411 41.343 283 122 7 340 579 4 285 1.48e-56 192
Msa0777060 MtrunA17_Chr1g0188431 41.214 313 175 7 7 317 21 326 9.31e-72 233
Msa0777060 MtrunA17_Chr1g0188431 37.037 297 145 7 317 579 39 327 3.63e-56 192
Msa0777060 MtrunA17_Chr1g0204011 43.182 308 152 10 5 301 12 307 2.88e-68 224
Msa0777060 MtrunA17_Chr1g0204011 38.361 305 141 9 315 579 25 322 2.76e-55 189
Msa0777060 MtrunA17_Chr1g0194151 39.748 317 174 6 7 310 13 325 6.55e-68 223
Msa0777060 MtrunA17_Chr1g0194151 34.177 316 160 5 310 579 20 333 1.87e-49 174
Msa0777060 MtrunA17_Chr5g0432321 91.379 116 7 1 149 261 17 132 1.04e-67 215
Msa0777060 MtrunA17_Chr5g0432321 76.724 116 27 0 407 522 17 132 1.66e-58 191
Msa0777060 MtrunA17_Chr1g0194271 39.198 324 173 6 7 310 13 332 2.52e-67 222
Msa0777060 MtrunA17_Chr1g0194271 34.969 326 157 6 309 581 19 342 1.48e-50 177
Msa0777060 MtrunA17_Chr6g0477071 40.940 298 165 8 23 317 52 341 1.99e-66 219
Msa0777060 MtrunA17_Chr6g0477071 35.077 325 163 9 295 579 26 342 1.73e-50 177
Msa0777060 MtrunA17_Chr1g0164891 41.216 296 156 7 29 310 93 384 8.20e-66 219
Msa0777060 MtrunA17_Chr1g0164891 35.762 302 149 6 321 579 93 392 1.35e-50 179
Msa0777060 MtrunA17_Chr3g0128061 38.558 319 179 6 4 310 5 318 8.23e-66 218
Msa0777060 MtrunA17_Chr3g0128061 36.482 307 149 6 315 579 24 326 6.08e-53 183
Msa0777060 MtrunA17_Chr4g0024121 39.130 322 178 8 1 310 3 318 1.60e-65 217
Msa0777060 MtrunA17_Chr4g0024121 35.577 312 154 8 310 579 20 326 1.03e-47 169
Msa0777060 MtrunA17_Chr1g0157051 40.836 311 165 8 1 300 1 303 5.05e-64 213
Msa0777060 MtrunA17_Chr1g0157051 35.644 303 149 8 315 578 22 317 1.08e-44 161
Msa0777060 MtrunA17_Chr2g0322861 40.615 325 170 11 1 310 62 378 3.74e-63 213
Msa0777060 MtrunA17_Chr2g0322861 35.806 310 154 8 311 579 81 386 1.53e-48 173
Msa0777060 MtrunA17_Chr5g0405991 39.550 311 168 8 1 300 1 302 1.75e-61 206
Msa0777060 MtrunA17_Chr5g0405991 36.393 305 141 9 317 579 23 316 1.74e-44 160
Msa0777060 MtrunA17_Chr7g0225221 40.308 325 173 9 4 317 5 319 1.32e-60 203
Msa0777060 MtrunA17_Chr7g0225221 33.775 302 157 7 316 579 24 320 5.72e-41 150
Msa0777060 MtrunA17_Chr8g0371381 40.418 287 153 7 25 300 26 305 2.01e-60 203
Msa0777060 MtrunA17_Chr8g0371381 35.855 304 144 9 317 579 26 319 8.37e-46 164
Msa0777060 MtrunA17_Chr2g0279041 42.088 297 147 9 29 310 31 317 8.04e-60 202
Msa0777060 MtrunA17_Chr2g0279041 35.314 303 144 9 321 579 31 325 1.61e-43 158
Msa0777060 MtrunA17_Chr7g0268501 39.752 322 172 10 1 310 1 312 7.99e-59 199
Msa0777060 MtrunA17_Chr7g0268501 38.870 301 141 7 317 579 25 320 2.07e-51 179
Msa0777060 MtrunA17_Chr7g0268521 39.752 322 172 10 1 310 1 312 7.99e-59 199
Msa0777060 MtrunA17_Chr7g0268521 38.870 301 141 7 317 579 25 320 2.07e-51 179
Msa0777060 MtrunA17_Chr6g0460711 36.306 314 184 7 5 310 1 306 2.46e-57 195
Msa0777060 MtrunA17_Chr6g0460711 33.663 303 160 6 313 579 17 314 1.05e-43 158
Msa0777060 MtrunA17_Chr1g0148021 38.580 324 175 10 3 310 5 320 6.29e-57 194
Msa0777060 MtrunA17_Chr1g0148021 34.516 310 150 10 316 579 26 328 1.31e-41 153
Msa0777060 MtrunA17_Chr4g0046131 40.468 299 158 8 24 307 41 334 1.18e-56 194
Msa0777060 MtrunA17_Chr4g0046131 34.754 305 151 9 316 575 41 342 2.68e-39 147
Msa0777060 MtrunA17_Chr4g0076211 38.235 306 165 11 29 325 45 335 1.13e-54 188
Msa0777060 MtrunA17_Chr4g0076211 36.093 302 141 10 321 581 45 335 7.97e-45 162
Msa0777060 MtrunA17_Chr5g0401431 36.923 325 183 9 3 310 2 321 1.14e-54 188
Msa0777060 MtrunA17_Chr5g0401431 32.573 307 161 6 312 575 22 325 3.06e-39 146
Msa0777060 MtrunA17_Chr7g0254201 36.610 295 172 7 23 310 18 304 1.30e-54 187
Msa0777060 MtrunA17_Chr7g0254201 31.803 305 160 8 315 580 18 313 6.17e-38 142
Msa0777060 MtrunA17_Chr4g0072091 40.532 301 157 9 24 310 23 315 1.43e-54 187
Msa0777060 MtrunA17_Chr4g0072091 32.792 308 156 8 316 579 23 323 4.50e-39 145
Msa0777060 MtrunA17_Chr2g0296621 41.017 295 154 10 25 310 50 333 2.40e-54 187
Msa0777060 MtrunA17_Chr2g0296621 37.582 306 134 10 317 579 50 341 6.08e-42 154
Msa0777060 MtrunA17_Chr3g0114461 51.337 187 87 3 394 579 9 192 2.42e-54 182
Msa0777060 MtrunA17_Chr3g0114461 50.273 183 84 4 132 310 5 184 5.23e-49 168
Msa0777060 MtrunA17_Chr4g0053871 38.141 312 175 7 10 310 12 316 9.09e-54 186
Msa0777060 MtrunA17_Chr4g0053871 33.663 303 156 7 313 575 23 320 3.41e-40 149
Msa0777060 MtrunA17_Chr4g0063671 37.461 323 173 10 14 317 7 319 2.94e-53 184
Msa0777060 MtrunA17_Chr4g0063671 31.613 310 159 9 315 579 19 320 2.91e-36 138
Msa0777060 MtrunA17_Chr8g0364291 37.143 315 180 6 9 310 7 316 1.11e-52 182
Msa0777060 MtrunA17_Chr8g0364291 32.372 312 164 6 313 581 19 326 2.76e-40 149
Msa0777060 MtrunA17_Chr7g0254231 36.207 290 173 7 25 310 22 303 7.08e-51 177
Msa0777060 MtrunA17_Chr7g0254231 32.550 298 158 8 317 579 22 311 1.57e-38 144
Msa0777060 MtrunA17_Chr1g0197411 35.647 317 185 8 8 310 11 322 8.39e-51 178
Msa0777060 MtrunA17_Chr1g0197411 30.547 311 168 7 315 581 26 332 1.58e-37 142
Msa0777060 MtrunA17_Chr2g0329641 35.224 335 179 13 4 310 3 327 2.00e-48 171
Msa0777060 MtrunA17_Chr2g0329641 30.645 310 162 9 316 580 35 336 2.03e-33 130
Msa0777060 MtrunA17_Chr6g0451571 35.759 316 182 9 10 310 17 326 6.77e-48 170
Msa0777060 MtrunA17_Chr6g0451571 31.270 307 165 8 315 579 32 334 4.92e-34 132
Msa0777060 MtrunA17_Chr2g0316481 35.398 339 170 10 23 318 74 406 1.62e-47 171
Msa0777060 MtrunA17_Chr2g0316481 29.762 336 160 9 315 578 74 405 8.98e-32 127
Msa0777060 MtrunA17_Chr2g0316791 35.693 339 169 10 23 318 74 406 1.87e-47 171
Msa0777060 MtrunA17_Chr2g0316791 30.060 336 159 10 315 578 74 405 2.37e-31 126
Msa0777060 MtrunA17_Chr2g0278671 37.013 308 160 9 23 310 22 315 2.89e-47 168
Msa0777060 MtrunA17_Chr2g0278671 31.529 314 164 9 310 579 17 323 3.68e-32 126
Msa0777060 MtrunA17_Chr2g0279061 42.802 257 122 10 69 310 12 258 5.77e-47 165
Msa0777060 MtrunA17_Chr2g0279061 34.981 263 119 9 361 579 12 266 1.23e-30 120
Msa0777060 MtrunA17_Chr2g0316831 35.103 339 171 10 23 318 110 442 9.27e-46 167
Msa0777060 MtrunA17_Chr2g0316831 29.464 336 161 9 315 578 110 441 1.31e-31 127
Msa0777060 MtrunA17_Chr6g0467161 35.235 298 178 11 20 310 39 328 1.11e-45 164
Msa0777060 MtrunA17_Chr6g0467161 30.435 345 193 12 272 579 2 336 7.82e-39 145
Msa0777060 MtrunA17_Chr2g0316191 34.706 340 172 10 23 318 74 407 3.13e-45 165
Msa0777060 MtrunA17_Chr2g0316191 29.377 337 161 10 315 578 74 406 1.46e-30 124
Msa0777060 MtrunA17_Chr6g0467121 36.577 298 171 11 20 310 69 355 5.69e-45 163
Msa0777060 MtrunA17_Chr6g0467121 32.333 300 166 10 312 579 69 363 1.79e-32 129
Msa0777060 MtrunA17_Chr6g0467251 34.579 321 190 9 3 310 7 320 9.28e-45 162
Msa0777060 MtrunA17_Chr6g0467251 27.070 314 189 7 297 575 16 324 2.00e-29 119
Msa0777060 MtrunA17_Chr3g0136751 34.347 329 192 7 1 315 1 319 9.30e-43 155
Msa0777060 MtrunA17_Chr3g0136751 30.794 315 167 6 310 581 18 324 6.63e-30 120
Msa0777060 MtrunA17_Chr4g0075241 30.640 297 191 5 24 310 28 319 4.29e-42 154
Msa0777060 MtrunA17_Chr4g0075241 26.490 302 182 6 316 579 28 327 8.68e-29 117
Msa0777060 MtrunA17_Chr1g0181511 34.680 297 179 8 23 310 25 315 4.67e-42 154
Msa0777060 MtrunA17_Chr1g0181511 28.947 304 172 6 315 579 25 323 1.12e-29 119
Msa0777060 MtrunA17_Chr2g0311251 34.218 339 173 11 23 318 9 340 3.40e-41 152
Msa0777060 MtrunA17_Chr2g0311251 28.274 336 164 10 315 578 9 339 1.39e-25 108
Msa0777060 MtrunA17_Chr1g0181431 33.557 298 183 7 22 310 24 315 4.48e-41 151
Msa0777060 MtrunA17_Chr1g0181431 27.869 305 176 6 314 579 24 323 1.11e-28 116
Msa0777060 MtrunA17_Chr2g0311241 31.892 370 165 10 23 310 58 422 2.67e-40 152
Msa0777060 MtrunA17_Chr2g0311241 27.189 217 118 5 400 578 215 429 1.12e-15 79.7
Msa0777060 MtrunA17_Chr2g0311241 44.304 79 42 2 315 393 58 134 1.35e-11 67.0
Msa0777060 MtrunA17_Chr1g0181481 33.670 297 182 7 23 310 25 315 3.10e-40 149
Msa0777060 MtrunA17_Chr1g0181481 27.303 304 177 6 315 579 25 323 8.59e-27 111
Msa0777060 MtrunA17_Chr3g0114491 62.727 110 40 1 24 133 17 125 1.04e-39 141
Msa0777060 MtrunA17_Chr3g0114491 59.494 79 32 0 316 394 17 95 1.54e-25 102
Msa0777060 MtrunA17_Chr2g0292281 42.500 200 100 4 118 310 17 208 1.53e-38 142
Msa0777060 MtrunA17_Chr2g0292281 41.451 193 97 3 396 581 35 218 3.27e-36 135
Msa0777060 MtrunA17_Chr5g0413051 31.148 305 189 8 25 313 73 372 1.91e-37 142
Msa0777060 MtrunA17_Chr5g0413051 28.664 307 173 8 317 579 73 377 2.71e-30 122
Msa0777060 MtrunA17_Chr4g0074851 32.203 295 185 6 25 310 32 320 5.23e-37 140
Msa0777060 MtrunA17_Chr4g0074851 28.477 302 174 7 317 580 32 329 8.95e-25 105
Msa0777060 MtrunA17_Chr5g0432361 57.143 112 43 1 467 578 2 108 3.84e-36 130
Msa0777060 MtrunA17_Chr5g0432361 56.190 105 38 2 209 310 2 101 1.68e-30 115
Msa0777060 MtrunA17_Chr2g0316811 37.391 230 116 7 23 228 48 273 3.02e-32 127
Msa0777060 MtrunA17_Chr2g0316811 28.340 247 114 8 315 500 48 292 9.45e-16 79.0
Msa0777060 MtrunA17_Chr4g0004591 28.834 326 152 8 25 317 77 355 2.80e-31 124
Msa0777060 MtrunA17_Chr4g0004591 27.645 293 167 7 317 578 77 355 6.13e-27 112
Msa0777060 MtrunA17_Chr2g0316141 32.042 284 139 10 71 317 11 277 6.28e-26 107
Msa0777060 MtrunA17_Chr2g0316141 27.306 271 138 9 363 578 11 277 1.20e-12 68.6
Msa0777060 MtrunA17_Chr2g0316181 32.042 284 139 10 71 317 11 277 6.28e-26 107
Msa0777060 MtrunA17_Chr2g0316181 27.306 271 138 9 363 578 11 277 1.20e-12 68.6
Msa0777060 MtrunA17_Chr3g0104101 39.007 141 75 5 450 579 9 149 4.72e-19 84.3
Msa0777060 MtrunA17_Chr3g0104101 38.525 122 62 3 192 300 9 130 7.65e-15 72.0
Msa0777060 MtrunA17_Chr6g0468731 54.795 73 28 3 64 136 22 89 4.61e-18 79.3
Msa0777060 MtrunA17_Chr1g0181491 42.105 114 63 3 23 136 10 120 4.92e-18 81.3
Msa0777060 MtrunA17_Chr1g0181501 28.333 180 120 4 406 579 13 189 2.02e-15 75.1
Msa0777060 MtrunA17_Chr1g0181501 28.488 172 111 5 148 310 13 181 4.13e-13 68.2
Msa0777060 MtrunA17_Chr1g0196191 51.471 68 31 2 67 134 27 92 3.14e-13 67.8
Msa0777060 MtrunA17_Chr4g0013811 43.243 74 41 1 138 211 6 78 4.10e-12 62.0
Msa0777060 MtrunA17_Chr4g0013811 43.243 74 41 1 396 469 6 78 9.78e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0777060 AT5G05340.1 56.122 294 118 5 23 310 28 316 2.22e-108 328
Msa0777060 AT5G05340.1 45.847 301 123 5 315 579 28 324 4.63e-83 263
Msa0777060 AT1G14550.1 49.359 312 148 6 5 310 6 313 2.53e-94 292
Msa0777060 AT1G14550.1 46.844 301 121 6 315 579 24 321 6.57e-79 252
Msa0777060 AT5G58390.1 52.258 310 136 6 8 310 4 308 5.42e-94 291
Msa0777060 AT5G58390.1 46.732 306 122 6 311 579 15 316 1.08e-73 238
Msa0777060 AT5G58400.1 48.734 316 149 6 3 310 7 317 2.03e-93 290
Msa0777060 AT5G58400.1 44.850 301 127 6 315 579 28 325 4.31e-76 244
Msa0777060 AT2G18150.1 47.386 306 146 5 23 317 34 335 3.47e-90 282
Msa0777060 AT2G18150.1 45.246 305 125 5 315 579 34 336 3.26e-81 258
Msa0777060 AT5G66390.1 49.832 297 134 5 25 310 33 325 4.68e-90 281
Msa0777060 AT5G66390.1 45.395 304 124 5 317 580 33 334 2.53e-75 243
Msa0777060 AT4G36430.1 47.386 306 146 5 23 317 28 329 1.37e-88 277
Msa0777060 AT4G36430.1 43.934 305 129 5 315 579 28 330 1.08e-74 241
Msa0777060 AT1G14540.1 49.147 293 140 6 23 310 19 307 1.24e-87 274
Msa0777060 AT1G14540.1 43.000 300 133 5 315 579 19 315 1.30e-72 235
Msa0777060 AT2G18140.1 48.355 304 142 5 25 317 35 334 1.88e-87 275
Msa0777060 AT2G18140.1 45.215 303 124 5 317 579 35 335 2.64e-77 248
Msa0777060 AT5G06720.1 44.127 315 162 4 7 310 14 325 4.02e-86 271
Msa0777060 AT5G06720.1 41.311 305 138 4 315 579 30 333 9.46e-71 231
Msa0777060 AT1G44970.1 47.157 299 144 5 23 310 43 338 4.58e-83 263
Msa0777060 AT1G44970.1 43.279 305 132 4 315 579 43 346 5.95e-72 234
Msa0777060 AT5G06730.1 43.175 315 165 4 7 310 15 326 4.71e-83 264
Msa0777060 AT5G06730.1 40.000 305 142 4 315 579 31 334 1.46e-66 221
Msa0777060 AT3G50990.1 46.205 303 148 5 19 310 35 333 4.90e-83 263
Msa0777060 AT3G50990.1 39.879 331 155 6 292 580 14 342 3.74e-68 224
Msa0777060 AT5G19890.1 46.708 319 146 10 6 310 11 319 2.81e-81 258
Msa0777060 AT5G19890.1 41.100 309 131 10 315 580 28 328 2.23e-63 211
Msa0777060 AT4G08770.1 47.508 301 142 7 23 310 22 319 7.42e-81 258
Msa0777060 AT4G08770.1 42.173 313 138 6 309 579 16 327 4.55e-69 227
Msa0777060 AT2G38390.1 47.333 300 143 6 23 310 29 325 1.30e-79 254
Msa0777060 AT2G38390.1 42.345 307 133 5 315 579 29 333 2.53e-66 220
Msa0777060 AT4G08780.1 46.512 301 145 7 23 310 22 319 7.20e-78 250
Msa0777060 AT4G08780.1 41.534 313 140 6 309 579 16 327 7.46e-66 219
Msa0777060 AT1G49570.1 47.020 302 141 7 23 310 46 342 9.73e-78 250
Msa0777060 AT1G49570.1 42.105 304 130 7 315 575 46 346 4.29e-63 211
Msa0777060 AT2G38380.1 45.955 309 152 6 23 319 29 334 3.24e-77 248
Msa0777060 AT2G38380.1 42.345 307 133 5 315 579 29 333 1.39e-66 221
Msa0777060 AT3G49120.1 44.918 305 152 7 19 310 26 327 1.57e-76 247
Msa0777060 AT3G49120.1 40.836 311 141 6 311 579 26 335 1.52e-64 215
Msa0777060 AT1G68850.1 42.947 319 155 8 4 300 3 316 3.51e-76 245
Msa0777060 AT1G68850.1 39.739 307 140 7 317 579 30 335 8.41e-60 202
Msa0777060 AT3G32980.1 45.183 301 149 7 23 310 29 326 7.72e-76 245
Msa0777060 AT3G32980.1 42.020 307 135 6 315 579 29 334 5.38e-67 222
Msa0777060 AT3G49110.1 44.850 301 150 7 23 310 31 328 1.06e-74 242
Msa0777060 AT3G49110.1 41.368 307 137 6 315 579 31 336 5.59e-65 216
Msa0777060 AT4G16270.1 46.643 283 134 7 30 300 55 332 7.22e-74 239
Msa0777060 AT4G16270.1 41.137 299 130 7 322 579 55 348 3.21e-60 204
Msa0777060 AT5G51890.1 44.625 307 149 11 8 300 7 306 4.05e-73 237
Msa0777060 AT5G51890.1 38.907 311 142 9 310 579 19 322 7.03e-58 197
Msa0777060 AT5G19880.1 43.925 321 159 8 5 310 7 321 2.70e-72 235
Msa0777060 AT5G19880.1 36.218 312 147 7 315 579 23 329 3.01e-51 179
Msa0777060 AT2G35380.1 44.201 319 157 8 8 310 14 327 9.90e-72 234
Msa0777060 AT2G35380.1 40.850 306 138 5 317 579 30 335 2.20e-61 206
Msa0777060 AT2G22420.1 40.895 313 164 8 11 310 7 311 1.98e-71 233
Msa0777060 AT2G22420.1 36.513 304 147 7 317 580 23 320 3.72e-56 192
Msa0777060 AT1G71695.1 42.475 299 160 7 19 310 38 331 9.73e-70 229
Msa0777060 AT1G71695.1 37.864 309 155 6 306 579 33 339 5.79e-59 201
Msa0777060 AT3G01190.1 43.478 299 151 8 25 313 26 316 2.78e-69 227
Msa0777060 AT3G01190.1 38.870 301 141 6 317 579 26 321 1.64e-55 190
Msa0777060 AT1G05240.1 41.554 296 153 8 28 310 29 317 1.63e-65 217
Msa0777060 AT1G05240.1 36.789 299 140 7 320 575 29 321 1.27e-49 175
Msa0777060 AT1G05250.1 41.554 296 153 8 28 310 29 317 1.63e-65 217
Msa0777060 AT1G05250.1 36.789 299 140 7 320 575 29 321 1.27e-49 175
Msa0777060 AT3G03670.1 38.854 314 173 8 8 310 8 313 4.53e-65 216
Msa0777060 AT3G03670.1 34.839 310 150 8 314 579 20 321 8.55e-50 175
Msa0777060 AT5G15180.1 40.635 315 170 8 7 310 13 321 4.94e-65 216
Msa0777060 AT5G15180.1 38.312 308 148 6 311 579 25 329 1.62e-51 180
Msa0777060 AT4G11290.1 38.629 321 179 9 8 315 8 323 7.91e-65 215
Msa0777060 AT4G11290.1 35.849 318 153 9 307 579 15 326 2.57e-48 171
Msa0777060 AT4G33420.1 42.014 288 158 7 25 310 37 317 9.09e-65 215
Msa0777060 AT4G33420.1 36.610 295 149 7 317 579 37 325 7.89e-50 175
Msa0777060 AT4G33420.2 42.014 288 158 7 25 310 84 364 3.73e-64 215
Msa0777060 AT4G33420.2 36.735 294 150 6 317 579 84 372 2.83e-49 175
Msa0777060 AT1G05260.1 39.319 323 177 10 1 310 1 317 4.17e-64 213
Msa0777060 AT1G05260.1 33.546 313 163 8 308 579 17 325 9.57e-47 167
Msa0777060 AT5G42180.1 40.193 311 166 8 1 300 1 302 1.17e-63 212
Msa0777060 AT5G42180.1 36.364 308 150 9 310 578 16 316 1.37e-48 172
Msa0777060 AT3G21770.1 40.391 307 163 9 17 310 21 320 1.87e-62 209
Msa0777060 AT3G21770.1 35.599 309 154 8 308 575 20 324 7.65e-46 165
Msa0777060 AT5G64120.1 42.466 292 148 9 29 310 39 320 5.84e-62 207
Msa0777060 AT5G64120.1 36.027 297 145 7 321 579 39 328 4.17e-47 168
Msa0777060 AT5G39580.1 40.000 315 168 11 7 310 7 311 1.35e-56 193
Msa0777060 AT5G39580.1 33.779 299 150 9 321 579 29 319 2.80e-37 141
Msa0777060 AT5G40150.1 38.514 296 169 6 23 310 30 320 2.79e-56 192
Msa0777060 AT5G40150.1 33.887 301 161 6 315 579 30 328 6.19e-42 154
Msa0777060 AT5G17820.1 36.422 313 173 8 5 310 12 305 3.62e-56 192
Msa0777060 AT5G17820.1 32.680 306 151 9 315 579 22 313 1.98e-40 149
Msa0777060 AT5G17820.2 36.422 313 173 8 5 310 65 358 3.32e-55 191
Msa0777060 AT5G17820.2 32.680 306 151 9 315 579 75 366 1.18e-39 149
Msa0777060 AT3G28200.1 37.966 295 171 6 23 310 19 308 3.85e-55 189
Msa0777060 AT3G28200.1 32.812 320 174 7 297 579 1 316 4.45e-42 154
Msa0777060 AT5G64100.1 39.249 293 157 9 29 310 41 323 2.00e-54 188
Msa0777060 AT5G64100.1 32.667 300 152 9 321 579 41 331 5.36e-35 135
Msa0777060 AT4G37530.1 39.145 304 162 7 23 310 25 321 7.52e-54 186
Msa0777060 AT4G37530.1 33.019 318 157 9 310 579 20 329 1.68e-39 147
Msa0777060 AT5G22410.1 34.783 322 186 10 3 310 6 317 1.49e-53 186
Msa0777060 AT5G22410.1 28.431 306 166 9 315 576 26 322 3.07e-34 133
Msa0777060 AT2G18980.1 36.923 325 180 10 1 310 1 315 4.49e-53 184
Msa0777060 AT2G18980.1 32.268 313 160 9 311 579 19 323 3.60e-37 140
Msa0777060 AT1G30870.1 39.355 310 165 11 25 322 51 349 4.81e-53 185
Msa0777060 AT1G30870.1 36.601 306 140 10 317 579 51 345 8.15e-44 160
Msa0777060 AT4G26010.1 35.484 310 184 10 5 310 4 301 1.29e-52 182
Msa0777060 AT4G26010.1 31.894 301 160 9 314 579 19 309 1.62e-38 144
Msa0777060 AT4G26010.2 35.484 310 184 10 5 310 32 329 1.47e-52 183
Msa0777060 AT4G26010.2 30.055 366 189 13 252 579 1 337 1.01e-38 145
Msa0777060 AT2G41480.1 35.347 331 181 11 7 317 10 327 3.14e-52 182
Msa0777060 AT2G41480.1 32.468 308 155 9 317 579 29 328 1.04e-37 142
Msa0777060 AT5G64110.1 38.558 319 173 10 5 310 14 322 7.58e-52 181
Msa0777060 AT5G64110.1 34.000 300 150 9 321 579 38 330 4.58e-36 138
Msa0777060 AT5G67400.1 38.272 324 171 10 8 310 6 321 1.19e-51 180
Msa0777060 AT5G67400.1 33.119 311 160 7 313 579 23 329 9.52e-38 142
Msa0777060 AT4G30170.1 37.294 303 165 9 23 310 25 317 2.91e-51 179
Msa0777060 AT4G30170.1 34.641 306 154 10 315 579 25 325 3.07e-39 146
Msa0777060 AT4G17690.1 38.158 304 173 7 16 310 17 314 2.45e-50 177
Msa0777060 AT4G17690.1 33.003 303 161 8 317 581 26 324 7.97e-38 142
Msa0777060 AT5G14130.1 36.601 306 177 7 16 310 23 322 6.60e-50 176
Msa0777060 AT5G14130.1 30.892 314 165 9 310 579 25 330 3.78e-34 132
Msa0777060 AT5G47000.1 37.975 316 178 9 5 310 15 322 6.81e-50 176
Msa0777060 AT5G47000.1 31.833 311 169 8 310 581 26 332 2.61e-37 141
Msa0777060 AT4G37520.1 37.171 304 168 7 23 310 25 321 1.23e-49 175
Msa0777060 AT4G37520.1 31.210 314 158 8 315 579 25 329 1.76e-35 136
Msa0777060 AT5G14130.2 36.601 306 177 7 16 310 64 363 1.28e-49 176
Msa0777060 AT5G14130.2 30.892 314 165 9 310 579 66 371 8.06e-34 132
Msa0777060 AT4G33870.1 32.743 339 174 9 28 319 71 402 6.16e-49 175
Msa0777060 AT4G33870.1 28.869 336 156 9 320 578 71 400 9.62e-33 130
Msa0777060 AT1G24110.1 35.256 312 181 8 14 310 9 314 1.57e-48 172
Msa0777060 AT1G24110.1 31.803 305 166 6 315 579 20 322 1.38e-39 147
Msa0777060 AT2G34060.1 35.714 336 182 12 3 310 9 338 2.83e-48 172
Msa0777060 AT2G34060.1 33.235 340 176 11 283 576 9 343 1.03e-37 143
Msa0777060 AT2G35380.2 43.621 243 117 7 84 310 1 239 6.16e-48 168
Msa0777060 AT2G35380.2 38.057 247 110 5 376 579 1 247 3.08e-38 141
Msa0777060 AT2G39040.1 38.361 305 165 10 23 310 44 342 9.34e-48 171
Msa0777060 AT2G39040.1 34.084 311 155 8 315 579 44 350 1.77e-37 142
Msa0777060 AT4G37520.2 36.842 304 166 8 23 310 25 318 1.03e-47 170
Msa0777060 AT4G37520.2 31.290 310 160 7 315 579 25 326 3.51e-36 138
Msa0777060 AT1G34510.1 35.333 300 182 9 14 310 11 301 1.06e-47 169
Msa0777060 AT1G34510.1 31.579 304 165 8 310 579 15 309 4.49e-36 137
Msa0777060 AT4G37530.2 39.768 259 135 6 23 265 25 278 2.18e-47 167
Msa0777060 AT4G37530.2 32.453 265 125 8 310 526 20 278 8.37e-31 122
Msa0777060 AT3G49960.1 36.482 307 170 9 21 310 23 321 1.17e-46 167
Msa0777060 AT3G49960.1 32.268 313 160 8 313 579 23 329 3.01e-35 135
Msa0777060 AT4G25980.1 34.056 323 190 10 2 310 5 318 9.35e-46 164
Msa0777060 AT4G25980.1 30.097 309 170 7 313 579 22 326 4.37e-31 124
Msa0777060 AT1G77100.1 36.250 320 178 12 5 310 4 311 2.84e-45 163
Msa0777060 AT1G77100.1 30.719 306 175 9 309 579 16 319 8.09e-33 128
Msa0777060 AT2G24800.1 34.426 305 173 7 22 310 28 321 1.63e-44 161
Msa0777060 AT2G24800.1 31.068 309 163 7 314 579 28 329 3.42e-33 130
Msa0777060 AT4G31760.1 32.602 319 187 8 8 310 12 318 7.87e-43 156
Msa0777060 AT4G31760.1 29.703 303 172 6 315 579 27 326 3.23e-31 124
Msa0777060 AT5G24070.1 34.069 317 179 11 12 310 23 327 2.00e-42 155
Msa0777060 AT5G24070.1 28.387 310 168 9 316 579 34 335 5.41e-28 115
Msa0777060 AT2G43480.1 34.076 314 178 11 15 310 25 327 2.36e-42 155
Msa0777060 AT2G43480.1 28.395 324 184 9 299 579 17 335 2.62e-30 122
Msa0777060 AT2G37130.1 33.446 296 183 7 24 310 29 319 1.61e-38 144
Msa0777060 AT2G37130.1 28.013 307 170 5 316 579 29 327 2.49e-26 110
Msa0777060 AT2G37130.2 33.562 292 180 7 28 310 2 288 1.63e-38 144
Msa0777060 AT2G37130.2 28.053 303 167 5 320 579 2 296 3.08e-26 109
Msa0777060 AT3G17070.1 31.250 304 181 8 25 310 38 331 1.82e-38 145
Msa0777060 AT3G17070.1 28.289 304 175 7 317 579 38 339 2.05e-29 119
Msa0777060 AT4G21960.1 31.864 295 186 6 25 310 31 319 4.43e-37 140
Msa0777060 AT4G21960.1 27.523 327 197 5 291 580 5 328 7.74e-28 114
Msa0777060 AT4G25980.2 39.394 198 111 6 2 199 50 238 2.29e-35 135
Msa0777060 AT4G25980.2 33.523 176 82 4 313 457 67 238 7.85e-19 87.4
Msa0777060 AT5G39580.2 41.327 196 107 6 7 202 7 194 1.73e-34 130
Msa0777060 AT5G39580.2 31.977 172 79 5 321 460 29 194 4.82e-14 72.4
Msa0777060 AT2G24800.2 40.698 172 95 3 22 193 28 192 1.28e-29 117
Msa0777060 AT2G24800.2 31.953 169 80 3 314 451 28 192 8.69e-15 74.7
Msa0777060 AT3G17070.2 28.269 283 174 9 53 317 4 275 5.13e-26 108
Msa0777060 AT3G17070.2 28.877 187 121 4 403 579 92 276 7.40e-17 81.6

Find 100 sgRNAs with CRISPR-Local

Find 415 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAGAACAACTAAGTCTTTA+AGG 0.059473 5_2:+55801384 None:intergenic
CCTCTAATTGAATTGATATT+TGG 0.121288 5_2:+55808207 None:intergenic
TACGGCTTTGTTGCATAAAA+AGG 0.128630 5_2:-55801183 Msa0777060:CDS
CCTCTAAGTGAATTGATATT+TGG 0.168385 5_2:+55802101 None:intergenic
CAAATTCTGCCATAATAATT+TGG 0.209369 5_2:+55808941 None:intergenic
TATTCTTCTTCATTCATATT+TGG 0.210525 5_2:+55800973 None:intergenic
TTGCAAATTGGCAGCAAAAT+TGG 0.211156 5_2:+55807599 None:intergenic
CCAAATATCAATTCACTTAG+AGG 0.217536 5_2:-55802101 Msa0777060:CDS
CCAAATATCAATTCAATTAG+AGG 0.217538 5_2:-55808207 Msa0777060:CDS
TTACCATCGCCGCCGATTCT+AGG 0.235834 5_2:+55807567 None:intergenic
AAAGCCTCTTACCGGGAAAA+AGG 0.241406 5_2:-55807340 Msa0777060:CDS
TTGCAAATGGGCTGCATAAT+TGG 0.262012 5_2:+55801286 None:intergenic
GTTTCTAAAGTTAGCGCATT+TGG 0.293144 5_2:+55807650 None:intergenic
AAAGACTTAGTTGTTCTATC+AGG 0.308669 5_2:-55801380 Msa0777060:CDS
GTCTTTAAGGTTTAGTCCTT+GGG 0.314864 5_2:+55801397 None:intergenic
TGCAATGGTAGGACTCAAAA+TGG 0.327673 5_2:+55808973 None:intergenic
AAGCTCACTCCAAATTATTA+TGG 0.332552 5_2:-55808950 Msa0777060:CDS
AAGGACTTAGTTGTTCTATC+TGG 0.333113 5_2:-55807693 Msa0777060:CDS
AGTTGGGCGGGCACAAATAT+TGG 0.345153 5_2:-55801532 Msa0777060:CDS
AACATCACGTTTGCAAGCTT+TGG 0.348583 5_2:+55808149 None:intergenic
TAGGATGTGTCAACTTTGTT+AGG 0.357975 5_2:+55807522 None:intergenic
AGTTGGGTGGTAAGCAATAT+TGG 0.363597 5_2:-55807845 Msa0777060:CDS
TTAACAACTGACTTTATGAT+TGG 0.366348 5_2:+55802782 None:intergenic
GGTAACTTAAAGCCTCTTAC+CGG 0.367302 5_2:-55807348 Msa0777060:CDS
GGTAACATAAAGCCACTTAC+TGG 0.367876 5_2:-55801035 Msa0777060:CDS
ATAGAACAACTAAGTCCTTA+AGG 0.379148 5_2:+55807697 None:intergenic
AGTCTTTAAGGTTTAGTCCT+TGG 0.380171 5_2:+55801396 None:intergenic
CTATCTGGTGGACACACAAT+TGG 0.400116 5_2:-55807678 Msa0777060:CDS
AGTTGACACATCCTACTATA+AGG 0.404370 5_2:-55807514 Msa0777060:CDS
CAAAAGGCATGCCCTCGAAT+TGG 0.405243 5_2:-55801266 Msa0777060:CDS
GTGAGATCAGGTGCAATTGC+AGG 0.409083 5_2:-55801004 Msa0777060:CDS
CTATCAGGTGGTCACACAAT+TGG 0.412653 5_2:-55801365 Msa0777060:CDS
TTTATGATTGGCAATGCCTT+AGG 0.413524 5_2:+55802794 None:intergenic
TGCATAATTGGTGTCTATGC+TGG 0.422494 5_2:+55801298 None:intergenic
TGGAGTTTCTATGATTAAGA+TGG 0.424465 5_2:-55801057 Msa0777060:CDS
TGGAGTTTCTATGATTAAGA+TGG 0.424465 5_2:-55807370 Msa0777060:CDS
AATGCGCTAACTTTAGAAAC+AGG 0.432289 5_2:-55807647 Msa0777060:CDS
TTTATGATTGGCAATGCGTT+AGG 0.436840 5_2:+55808917 None:intergenic
TACCATCGCCGCCGATTCTA+GGG 0.440071 5_2:+55807568 None:intergenic
TATTGGTACCAAGTGTTACT+AGG 0.448839 5_2:-55801515 Msa0777060:CDS
AGTTGACACAAAATACTATA+CGG 0.456279 5_2:-55801201 Msa0777060:CDS
AGCTGCTATAGCTAAAATAT+CGG 0.458807 5_2:+55808116 None:intergenic
TATTGGTACCAAGTGTTACT+AGG 0.461210 5_2:-55807828 Msa0777060:CDS
GGAGTTTCTATGATTAAGAT+GGG 0.461747 5_2:-55801056 Msa0777060:CDS
GGAGTTTCTATGATTAAGAT+GGG 0.461747 5_2:-55807369 Msa0777060:CDS
TTATGACAAAATTTGTCCTA+AGG 0.469907 5_2:-55802810 Msa0777060:CDS
CTCTTCTTCCTAGTAACACT+TGG 0.476428 5_2:+55807820 None:intergenic
GTCTCATGGACTAAACCTTA+AGG 0.478284 5_2:-55807712 Msa0777060:CDS
ATCACAAATTTCAAGTCTCA+TGG 0.485764 5_2:-55807726 Msa0777060:CDS
GAGATTCAAGATTTGCAAGC+AGG 0.488930 5_2:-55807800 Msa0777060:CDS
TGCCCTAGAATCGGCGGCGA+TGG 0.491410 5_2:-55807570 Msa0777060:intron
ATACAACAAAGCCTTATAGT+AGG 0.495502 5_2:+55807503 None:intergenic
CTTGAAGGAGTAGAATCAAA+TGG 0.501343 5_2:+55801224 None:intergenic
TGCAGTCTTCTCACCGATGA+AGG 0.501629 5_2:+55802127 None:intergenic
AAGGCATGCCCTCGAATTGG+CGG 0.502746 5_2:-55801263 Msa0777060:CDS
CTCTTCTGCCTAGTAACACT+TGG 0.506991 5_2:+55801507 None:intergenic
TTATGCAGCCCATTTGCAAA+AGG 0.509133 5_2:-55801282 Msa0777060:CDS
CAAAAGACATGCCCTAGAAT+CGG 0.510123 5_2:-55807579 Msa0777060:CDS
TCTTCTCACCAACGAAGGTA+GGG 0.513623 5_2:+55808238 None:intergenic
TTGTCATCGCCGCCAATTCG+AGG 0.516204 5_2:+55801254 None:intergenic
TCTTCTCACCGATGAAGGTA+GGG 0.516712 5_2:+55802132 None:intergenic
GACTTAGTTGTTCTATCAGG+TGG 0.517937 5_2:-55801377 Msa0777060:CDS
TTGTTAGGTGTAGAATCAAA+TGG 0.518388 5_2:+55807537 None:intergenic
AAAGCTCTTGATCAGAATGA+AGG 0.528130 5_2:+55807469 None:intergenic
GCATCAAATAACAGTTGGGC+GGG 0.532226 5_2:-55801544 Msa0777060:intron
GATGACACCCCTACCTTCAT+CGG 0.532241 5_2:-55802140 Msa0777060:CDS
GACTTAGTTGTTCTATCTGG+TGG 0.535722 5_2:-55807690 Msa0777060:CDS
GAAACTACATAGGGTTGTGA+TGG 0.535813 5_2:-55808282 Msa0777060:intron
AGCAAAATTGGTGTCTATGT+TGG 0.548843 5_2:+55807611 None:intergenic
AAAGCTCTTGATCAGAATGA+AGG 0.549289 5_2:+55801156 None:intergenic
TTACGTTAACAAAGCAGTCA+TGG 0.552379 5_2:+55808828 None:intergenic
GATGCACTAAGTTTAGAGAC+AGG 0.558230 5_2:-55801334 Msa0777060:CDS
TTCATTAATTAATAGTTGGG+TGG 0.560408 5_2:-55807858 Msa0777060:intron
AATTATTCGTGAGCCACGCA+TGG 0.561525 5_2:-55802753 Msa0777060:CDS
AATTATTCGTGAGCCACGCA+TGG 0.561525 5_2:-55808876 Msa0777060:CDS
AGATTCAAGATTTGCAAGCA+GGG 0.563486 5_2:-55807799 Msa0777060:CDS
TGGTTCTCAAAGTGATAGAT+TGG 0.568189 5_2:-55801123 Msa0777060:CDS
GGAGTGAGCTTTGCAATGGT+AGG 0.578435 5_2:+55808962 None:intergenic
CTTCTCACCGATGAAGGTAG+GGG 0.583894 5_2:+55802133 None:intergenic
CTTCTCACCAACGAAGGTAG+GGG 0.584326 5_2:+55808239 None:intergenic
GTAACATAAAGCCACTTACT+GGG 0.585077 5_2:-55801034 Msa0777060:CDS
GTGAAACTACAGGGTTGTGA+TGG 0.586550 5_2:-55802176 Msa0777060:intron
GTCTTCTCACCAACGAAGGT+AGG 0.586647 5_2:+55808237 None:intergenic
GTCTTCTCACCGATGAAGGT+AGG 0.586718 5_2:+55802131 None:intergenic
TGTCATCGCCGCCAATTCGA+GGG 0.587668 5_2:+55801255 None:intergenic
GATGACACCCCTACCTTCGT+TGG 0.589855 5_2:-55808246 Msa0777060:CDS
ATTTGGAGTGAGCTTTGCAA+TGG 0.594055 5_2:+55808958 None:intergenic
ATTAGGTGTGAGCTTTGCAA+TGG 0.596037 5_2:+55802835 None:intergenic
AGCAACGATGCTCCCATGCG+TGG 0.600639 5_2:+55802740 None:intergenic
TGGTTCTCAAAGTGATAAGT+TGG 0.601306 5_2:-55807436 Msa0777060:CDS
GTAACTTAAAGCCTCTTACC+GGG 0.604893 5_2:-55807347 Msa0777060:CDS
ATTATTCGTGAGCCACGCAT+GGG 0.612352 5_2:-55802752 Msa0777060:CDS
ATTATTCGTGAGCCACGCAT+GGG 0.612352 5_2:-55808875 Msa0777060:CDS
TGCATCAAATAACAGTTGGG+CGG 0.614262 5_2:-55801545 Msa0777060:intron
GGTGTGAGCTTTGCAATGGT+AGG 0.615923 5_2:+55802839 None:intergenic
AGGGGTGTCATCGAGTAGAA+CGG 0.620856 5_2:+55808257 None:intergenic
AAGGCTTTGTTGTATAAACA+AGG 0.625131 5_2:-55807495 Msa0777060:CDS
AGCAACGATGCTCCCATGCG+TGG 0.625399 5_2:+55808863 None:intergenic
TGCAGTCTTCTCACCAACGA+AGG 0.642554 5_2:+55808233 None:intergenic
AAGACATGCCCTAGAATCGG+CGG 0.670665 5_2:-55807576 Msa0777060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATATTATAAATTAATATTA+CGG + chr5_2:55806224-55806243 None:intergenic 0.0%
!! AAAAAAAAAAAAAAAAAAAA+AGG - chr5_2:55806452-55806471 Msa0777060:intron 0.0%
!!! TTCCTATTTTTTTTTTAAAA+GGG + chr5_2:55804702-55804721 None:intergenic 10.0%
!!! ATTCCTATTTTTTTTTTAAA+AGG + chr5_2:55804703-55804722 None:intergenic 10.0%
!! TTTAAAAAAAAAATAGGAAT+TGG - chr5_2:55804703-55804722 Msa0777060:intron 10.0%
!! TTAAAAAAAAAATAGGAATT+GGG - chr5_2:55804704-55804723 Msa0777060:intron 10.0%
!!! TTAAATTTTGGTTAATTTTA+AGG - chr5_2:55805038-55805057 Msa0777060:intron 10.0%
!!! AATAGTATCATAAATAATTT+TGG - chr5_2:55805091-55805110 Msa0777060:intron 10.0%
!!! ATAGTATCATAAATAATTTT+GGG - chr5_2:55805092-55805111 Msa0777060:intron 10.0%
!!! TAACTCTTTTTTTAAAATAT+AGG - chr5_2:55806907-55806926 Msa0777060:intron 10.0%
!!! ATACAAATTTTGAATAAAAA+AGG + chr5_2:55807699-55807718 None:intergenic 10.0%
!! ATGTATTAATTATTCTATAA+TGG + chr5_2:55807802-55807821 None:intergenic 10.0%
!!! TTAACAATTGATTTTATGAT+TGG + chr5_2:55801103-55801122 None:intergenic 15.0%
!!! ATATTTTTTTTTCGTGAATT+TGG - chr5_2:55802084-55802103 Msa0777060:intron 15.0%
!! AATTGTTTAATATAAAGTTG+AGG - chr5_2:55802752-55802771 Msa0777060:CDS 15.0%
!!! ATACTAATTTTGATTTGAAT+GGG + chr5_2:55803006-55803025 None:intergenic 15.0%
!!! AATACTAATTTTGATTTGAA+TGG + chr5_2:55803007-55803026 None:intergenic 15.0%
!!! TTACATGTAAATTTAAAACT+TGG + chr5_2:55803038-55803057 None:intergenic 15.0%
!! TTATATTACTTGAATGAATT+AGG - chr5_2:55803500-55803519 Msa0777060:intron 15.0%
!! ATGAATGTTAACAAAAATAA+AGG - chr5_2:55803933-55803952 Msa0777060:intron 15.0%
!! CAATTGATTATTTGATTATA+AGG + chr5_2:55804106-55804125 None:intergenic 15.0%
!! AATCAAATTATAATGAAAAG+TGG + chr5_2:55804238-55804257 None:intergenic 15.0%
!!! AATTTGTTTTAAACGAATTA+GGG + chr5_2:55805273-55805292 None:intergenic 15.0%
!! TGAACAAAACTAAATATTAT+TGG - chr5_2:55805947-55805966 Msa0777060:intron 15.0%
!! TTATTAAAAGAATGTTAAGA+TGG + chr5_2:55806633-55806652 None:intergenic 15.0%
!!! CAATTCTTATAGAAAATTTT+GGG - chr5_2:55806847-55806866 Msa0777060:intron 15.0%
!! TAACATGTAGTAAATAATTA+TGG - chr5_2:55806940-55806959 Msa0777060:intron 15.0%
!! TAAAAATCACAAGATAATAT+TGG + chr5_2:55807120-55807139 None:intergenic 15.0%
!!! ATATTATCTTGTGATTTTTA+TGG - chr5_2:55807120-55807139 Msa0777060:intron 15.0%
!!! CAAATTTTGTCATAATAATT+AGG + chr5_2:55807190-55807209 None:intergenic 15.0%
!! AATAATTATGTCAAACAACT+AGG - chr5_2:55801419-55801438 Msa0777060:CDS 20.0%
!! AGGTATTAGTTATACTATAA+TGG + chr5_2:55801694-55801713 None:intergenic 20.0%
!! TGCTTTCATTAATTAATAGT+TGG - chr5_2:55802143-55802162 Msa0777060:CDS 20.0%
!! GCTTTCATTAATTAATAGTT+GGG - chr5_2:55802144-55802163 Msa0777060:CDS 20.0%
!! TTATTGAGAATAAGAATTCT+AGG - chr5_2:55802814-55802833 Msa0777060:CDS 20.0%
!!! TTTTTCTTAACCATATGTTA+TGG - chr5_2:55803217-55803236 Msa0777060:intron 20.0%
!!! TTTTCTTAACCATATGTTAT+GGG - chr5_2:55803218-55803237 Msa0777060:intron 20.0%
!! ATAGGTTCCAAAATTATTAT+AGG - chr5_2:55803315-55803334 Msa0777060:intron 20.0%
!! TAGGTTCCAAAATTATTATA+GGG - chr5_2:55803316-55803335 Msa0777060:intron 20.0%
!!! TTTCTTCCCTATAATAATTT+TGG + chr5_2:55803325-55803344 None:intergenic 20.0%
!! AAATTATTATAGGGAAGAAA+TGG - chr5_2:55803325-55803344 Msa0777060:intron 20.0%
!! TAAGAAAGATGAAATATAAC+AGG - chr5_2:55803786-55803805 Msa0777060:intron 20.0%
!!! ATGTTTTCAAACTCTTATAA+AGG + chr5_2:55803828-55803847 None:intergenic 20.0%
!! TTATTTGATTATAAGGTTCA+AGG + chr5_2:55804099-55804118 None:intergenic 20.0%
!! TAATCAACAATTCTAAATTG+TGG - chr5_2:55804423-55804442 Msa0777060:intron 20.0%
!!! CAAAATTGTGTTATTATTTC+AGG + chr5_2:55804679-55804698 None:intergenic 20.0%
!!! TGCCCTTTTAAAAAAAAAAT+AGG - chr5_2:55804697-55804716 Msa0777060:intron 20.0%
!! TGCAGTAAAAATAGTTTAAA+AGG - chr5_2:55804994-55805013 Msa0777060:intron 20.0%
!! TTATAGGTTCAAAAACTATT+CGG - chr5_2:55805217-55805236 Msa0777060:intron 20.0%
!!! CAATTTGTTTTAAACGAATT+AGG + chr5_2:55805274-55805293 None:intergenic 20.0%
!!! TTTCTTTTTTCTTTTTCGTT+TGG + chr5_2:55805502-55805521 None:intergenic 20.0%
!! GAATGTATGAAATACATATA+AGG - chr5_2:55805743-55805762 Msa0777060:intron 20.0%
!! CTATCCAAAGAAAATATATA+AGG - chr5_2:55805773-55805792 Msa0777060:intron 20.0%
!!! AACACCTTATATATTTTCTT+TGG + chr5_2:55805780-55805799 None:intergenic 20.0%
!!! AAGAAAATATATAAGGTGTT+TGG - chr5_2:55805780-55805799 Msa0777060:intron 20.0%
!! AAAATCTGATAAGATTCTAA+CGG + chr5_2:55806000-55806019 None:intergenic 20.0%
!!! TATGATTGTATTTTAACAAG+CGG - chr5_2:55806309-55806328 Msa0777060:intron 20.0%
!! TGAAGAATTTAATTGTATCA+AGG - chr5_2:55806383-55806402 Msa0777060:intron 20.0%
!! TTTCATATGTAACCAAAAAA+AGG - chr5_2:55806410-55806429 Msa0777060:intron 20.0%
!!! ATACATGCTGTTTTTATAAA+GGG + chr5_2:55806755-55806774 None:intergenic 20.0%
!!! GCAATTCTTATAGAAAATTT+TGG - chr5_2:55806846-55806865 Msa0777060:intron 20.0%
! CAAATTCTGCCATAATAATT+TGG + chr5_2:55801067-55801086 None:intergenic 25.0%
!!! GATAATGTGTATTTTAAGTG+TGG - chr5_2:55801223-55801242 Msa0777060:CDS 25.0%
!! AGTAAAATGAAGCAAACTTT+TGG + chr5_2:55801262-55801281 None:intergenic 25.0%
!! TCATTTTACTCTGCTATATA+TGG - chr5_2:55801272-55801291 Msa0777060:CDS 25.0%
! CTACTATTCATATTAGATAC+TGG + chr5_2:55801371-55801390 None:intergenic 25.0%
! AAGTTTGCAAGAATATTAGT+TGG - chr5_2:55801454-55801473 Msa0777060:CDS 25.0%
! AGTTTGCAAGAATATTAGTT+GGG - chr5_2:55801455-55801474 Msa0777060:CDS 25.0%
! TATGTAGTTTCATATAGTTC+AGG + chr5_2:55801714-55801733 None:intergenic 25.0%
! TGAACTATATGAAACTACAT+AGG - chr5_2:55801713-55801732 Msa0777060:intron 25.0%
! GAACTATATGAAACTACATA+GGG - chr5_2:55801714-55801733 Msa0777060:intron 25.0%
! CCTCTAATTGAATTGATATT+TGG + chr5_2:55801801-55801820 None:intergenic 25.0%
! CCAAATATCAATTCAATTAG+AGG - chr5_2:55801798-55801817 Msa0777060:intron 25.0%
!! TAGTTAGAAGTGCAAAATAT+CGG + chr5_2:55801943-55801962 None:intergenic 25.0%
! TTCATTAATTAATAGTTGGG+TGG - chr5_2:55802147-55802166 Msa0777060:CDS 25.0%
!! TATGCTTTTGCATATGATTT+TGG - chr5_2:55802615-55802634 Msa0777060:intron 25.0%
! ATATGAATGAAGAAGGATAA+AGG - chr5_2:55802723-55802742 Msa0777060:CDS 25.0%
!! AGTCAAATTTTTATTCTTGC+CGG + chr5_2:55803178-55803197 None:intergenic 25.0%
!! AATGGTGATGTTTATTGTTA+AGG - chr5_2:55803343-55803362 Msa0777060:intron 25.0%
!! ATGGTGATGTTTATTGTTAA+GGG - chr5_2:55803344-55803363 Msa0777060:intron 25.0%
!! ATTTTACATACACAAAAGTG+CGG + chr5_2:55803455-55803474 None:intergenic 25.0%
! AAGTCATATATGCAATACTA+CGG - chr5_2:55803537-55803556 Msa0777060:intron 25.0%
!!! TCAAGGGTATTTTTATATTG+TGG + chr5_2:55803564-55803583 None:intergenic 25.0%
! GTCATAAATCGAAATAAAAG+AGG - chr5_2:55803729-55803748 Msa0777060:intron 25.0%
!!! GTGATTTTTGTTGATAGAAT+TGG + chr5_2:55803990-55804009 None:intergenic 25.0%
!! TTAAATGCTTTCATTTTGTG+TGG + chr5_2:55804026-55804045 None:intergenic 25.0%
!! AAACTTGCGAAAATTTTCAA+TGG + chr5_2:55804179-55804198 None:intergenic 25.0%
!!! AAGTGGTTGTTGTATTTTAA+TGG + chr5_2:55804221-55804240 None:intergenic 25.0%
!! AAACTTGAGAGAATTTTCAA+TGG - chr5_2:55804302-55804321 Msa0777060:intron 25.0%
! AGTTTATGAAAGGATACTTA+GGG + chr5_2:55804341-55804360 None:intergenic 25.0%
! AAAATGCACAATTCTACATT+AGG - chr5_2:55804377-55804396 Msa0777060:intron 25.0%
! AAATGCACAATTCTACATTA+GGG - chr5_2:55804378-55804397 Msa0777060:intron 25.0%
!!! GCTTGTTTGTTATTTGTTAA+TGG + chr5_2:55804482-55804501 None:intergenic 25.0%
! AAATAAACATAGAACAAACC+TGG - chr5_2:55804524-55804543 Msa0777060:intron 25.0%
! CATACAACAATGACAAAATA+CGG + chr5_2:55804976-55804995 None:intergenic 25.0%
! TCTAAGTATTATTCAGTTTG+AGG + chr5_2:55805065-55805084 None:intergenic 25.0%
!!! TCATAAATAATTTTGGGAGT+AGG - chr5_2:55805098-55805117 Msa0777060:intron 25.0%
!!! CATAAATAATTTTGGGAGTA+GGG - chr5_2:55805099-55805118 Msa0777060:intron 25.0%
!!! ATAAATAATTTTGGGAGTAG+GGG - chr5_2:55805100-55805119 Msa0777060:intron 25.0%
! GGAAAACAATTTACCATTAT+AGG - chr5_2:55805135-55805154 Msa0777060:intron 25.0%
! TTGAATGATACTTCCTATAA+TGG + chr5_2:55805151-55805170 None:intergenic 25.0%
! ATTGTCGTGAGATATATTAT+AGG - chr5_2:55805201-55805220 Msa0777060:intron 25.0%
!!! CATAAAAAAAAGCATCATCA+AGG + chr5_2:55805297-55805316 None:intergenic 25.0%
! ACAAAAAAACAAGATGAACT+AGG - chr5_2:55805343-55805362 Msa0777060:intron 25.0%
!!! TTTTTCTTTTTCGTTTGGTT+TGG + chr5_2:55805497-55805516 None:intergenic 25.0%
! ATAACCTTAGCAAATAAACA+TGG - chr5_2:55805651-55805670 Msa0777060:intron 25.0%
!! TTAACCATGTTTATTTGCTA+AGG + chr5_2:55805658-55805677 None:intergenic 25.0%
! TATTGTTCACTAATACTAGA+TGG - chr5_2:55805839-55805858 Msa0777060:intron 25.0%
!! GTTAGAATCTTATCAGATTT+TGG - chr5_2:55805999-55806018 Msa0777060:intron 25.0%
! TGCATTAATCTATTGTTTGT+TGG - chr5_2:55806105-55806124 Msa0777060:intron 25.0%
! ACACAAACACAGTAAATAAT+AGG + chr5_2:55806264-55806283 None:intergenic 25.0%
!!! ATGATTGTATTTTAACAAGC+GGG - chr5_2:55806310-55806329 Msa0777060:intron 25.0%
!!! CATATGAAAGAACCTTTTTT+TGG + chr5_2:55806425-55806444 None:intergenic 25.0%
!! GTTTTTATAAAGGGTAATGA+TGG + chr5_2:55806746-55806765 None:intergenic 25.0%
!!! GATACATGCTGTTTTTATAA+AGG + chr5_2:55806756-55806775 None:intergenic 25.0%
! TGATGTATATCATTTCTGAA+AGG - chr5_2:55806807-55806826 Msa0777060:intron 25.0%
!!! TATAGAAAATTTTGGGTCAA+CGG - chr5_2:55806854-55806873 Msa0777060:intron 25.0%
! CATGACTTGAAATATCATAT+AGG - chr5_2:55806880-55806899 Msa0777060:intron 25.0%
! TGAATGAAAATATAGCAACT+AGG + chr5_2:55806966-55806985 None:intergenic 25.0%
! TTATGACAAAATTTGTCCTA+AGG - chr5_2:55807195-55807214 Msa0777060:intron 25.0%
!! TTAACAACTGACTTTATGAT+TGG + chr5_2:55807226-55807245 None:intergenic 25.0%
!! AGCTATAAGAAAAAAGTACA+TGG + chr5_2:55807375-55807394 None:intergenic 25.0%
!!! GGAAACCTAATTTATTTTTC+CGG + chr5_2:55807573-55807592 None:intergenic 25.0%
! ATATCTGCACATGATATAAT+CGG + chr5_2:55807982-55808001 None:intergenic 25.0%
! CATATTGGAAATACTTACTA+TGG + chr5_2:55808034-55808053 None:intergenic 25.0%
! AAATTATCGTTGCAACATAT+TGG + chr5_2:55808049-55808068 None:intergenic 25.0%
!! ATATGTTGCAACGATAATTT+TGG - chr5_2:55808049-55808068 Msa0777060:intron 25.0%
!! TTTTATATTGTGGTAAAGTG+CGG + chr5_2:55808075-55808094 None:intergenic 25.0%
!! GAAGCATGATTTTAAATTGT+GGG + chr5_2:55808125-55808144 None:intergenic 25.0%
!!! AGAAGCATGATTTTAAATTG+TGG + chr5_2:55808126-55808145 None:intergenic 25.0%
!!! GCTTCTAGTTCTTAAAAATT+TGG - chr5_2:55808140-55808159 Msa0777060:CDS 25.0%
! GATATTACAAAAACTTTGAG+AGG - chr5_2:55808199-55808218 Msa0777060:CDS 25.0%
! AATTACATTGCGATTACAAT+TGG + chr5_2:55808243-55808262 None:intergenic 25.0%
! AACAAAAGACTAATTTCAGT+TGG + chr5_2:55808343-55808362 None:intergenic 25.0%
!! ATTTTGCATCAAATAACAGT+TGG - chr5_2:55808456-55808475 Msa0777060:intron 25.0%
!! TTTTGCATCAAATAACAGTT+GGG - chr5_2:55808457-55808476 Msa0777060:intron 25.0%
! ATAGAACAACTAAGTCTTTA+AGG + chr5_2:55808624-55808643 None:intergenic 25.0%
! AGTTGACACAAAATACTATA+CGG - chr5_2:55808804-55808823 Msa0777060:intron 25.0%
!! TATCCAATTTGTGCTTTTTG+TGG - chr5_2:55800997-55801016 Msa0777060:CDS 30.0%
AAGCTCACTCCAAATTATTA+TGG - chr5_2:55801055-55801074 Msa0777060:CDS 30.0%
!! AATGTGTATTTTAAGTGTGG+AGG - chr5_2:55801226-55801245 Msa0777060:CDS 30.0%
! CAATTCAATTAGAGGTTTTG+AGG - chr5_2:55801806-55801825 Msa0777060:intron 30.0%
AGCTGCTATAGCTAAAATAT+CGG + chr5_2:55801892-55801911 None:intergenic 30.0%
AATATCGGAAACACTTACTA+TGG + chr5_2:55801928-55801947 None:intergenic 30.0%
TTTGCACTTCTAACTAAACA+AGG - chr5_2:55801947-55801966 Msa0777060:intron 30.0%
TTATATTGCTGCAACAATTG+TGG + chr5_2:55801988-55802007 None:intergenic 30.0%
!! CAAAATTTCAGTTTTGATCG+CGG + chr5_2:55802058-55802077 None:intergenic 30.0%
AGTTGTGAGAAGTTGAAAAA+TGG + chr5_2:55802258-55802277 None:intergenic 30.0%
! ATCACAAATTTCAAGTCTCA+TGG - chr5_2:55802279-55802298 Msa0777060:intron 30.0%
ATAGAACAACTAAGTCCTTA+AGG + chr5_2:55802311-55802330 None:intergenic 30.0%
TTGTTAGGTGTAGAATCAAA+TGG + chr5_2:55802471-55802490 None:intergenic 30.0%
! ATACAACAAAGCCTTATAGT+AGG + chr5_2:55802505-55802524 None:intergenic 30.0%
!! AAGGCTTTGTTGTATAAACA+AGG - chr5_2:55802510-55802529 Msa0777060:intron 30.0%
! TCTGATCAAGAGCTTTTTAA+AGG - chr5_2:55802543-55802562 Msa0777060:intron 30.0%
TGGAGTTTCTATGATTAAGA+TGG - chr5_2:55802635-55802654 Msa0777060:intron 30.0%
GGAGTTTCTATGATTAAGAT+GGG - chr5_2:55802636-55802655 Msa0777060:intron 30.0%
TAACCAGATATGAATGAAGA+AGG - chr5_2:55802716-55802735 Msa0777060:CDS 30.0%
TATCCTTCTTCATTCATATC+TGG + chr5_2:55802722-55802741 None:intergenic 30.0%
AACAGAATCTTGAATTGTCA+AGG - chr5_2:55802842-55802861 Msa0777060:CDS 30.0%
AAATTGGAAGGAATGCTTAA+GGG + chr5_2:55803115-55803134 None:intergenic 30.0%
TAAATTGGAAGGAATGCTTA+AGG + chr5_2:55803116-55803135 None:intergenic 30.0%
TGTGACTATCATAAATTGGA+AGG + chr5_2:55803127-55803146 None:intergenic 30.0%
CACATGTGACTATCATAAAT+TGG + chr5_2:55803131-55803150 None:intergenic 30.0%
! AGCAAATCAAACTTTTACTC+CGG - chr5_2:55803156-55803175 Msa0777060:intron 30.0%
ATTAGATTGCAAGAGTAACA+AGG + chr5_2:55803269-55803288 None:intergenic 30.0%
TTAGATTGTTTCACCTTACA+AGG - chr5_2:55803290-55803309 Msa0777060:intron 30.0%
! TGGTGATGTTTATTGTTAAG+GGG - chr5_2:55803345-55803364 Msa0777060:intron 30.0%
!! TTTTACATACACAAAAGTGC+GGG + chr5_2:55803454-55803473 None:intergenic 30.0%
AATACCCTTGAATTGTATCA+TGG - chr5_2:55803573-55803592 Msa0777060:intron 30.0%
! CATTTTGTGTGGTACTTATA+CGG + chr5_2:55804015-55804034 None:intergenic 30.0%
!!! TGGTTGTTGTATTTTAATGG+TGG + chr5_2:55804218-55804237 None:intergenic 30.0%
GAGTTTATGAAAGGATACTT+AGG + chr5_2:55804342-55804361 None:intergenic 30.0%
ACAATTCTACATTAGGGTTT+GGG - chr5_2:55804384-55804403 Msa0777060:intron 30.0%
AAAAATAGGAATTGGGCTAT+TGG - chr5_2:55804711-55804730 Msa0777060:intron 30.0%
AAAATAGGAATTGGGCTATT+GGG - chr5_2:55804712-55804731 Msa0777060:intron 30.0%
ATGAAGTTGACTACAACAAA+AGG - chr5_2:55804863-55804882 Msa0777060:intron 30.0%
TGAAGTTGACTACAACAAAA+GGG - chr5_2:55804864-55804883 Msa0777060:intron 30.0%
AAAGGTTTAAATGTAGTGCA+AGG - chr5_2:55805012-55805031 Msa0777060:intron 30.0%
! AGTGCAAGGTTGTTAAATTT+TGG - chr5_2:55805026-55805045 Msa0777060:intron 30.0%
GACTTATAATATGTCTTCGT+TGG - chr5_2:55805403-55805422 Msa0777060:intron 30.0%
! AATTTTGTAAGCTGAAGAAG+AGG - chr5_2:55805520-55805539 Msa0777060:intron 30.0%
TTACATTTATACTCTAGGTG+AGG + chr5_2:55805561-55805580 None:intergenic 30.0%
TCAGCTTACATTTATACTCT+AGG + chr5_2:55805566-55805585 None:intergenic 30.0%
TGAAATACCATAGCAAATGA+AGG + chr5_2:55805694-55805713 None:intergenic 30.0%
TGTTATCAAATCTAGTAGCA+TGG + chr5_2:55806484-55806503 None:intergenic 30.0%
TAAAAAAATTCTCTCTCACG+AGG - chr5_2:55806662-55806681 Msa0777060:intron 30.0%
TTTGCTCTCGTCAAAATTAA+AGG - chr5_2:55806687-55806706 Msa0777060:intron 30.0%
! TTATAAAGGGTAATGATGGA+TGG + chr5_2:55806742-55806761 None:intergenic 30.0%
CCATTTAACTATATGCTTGT+AGG + chr5_2:55807087-55807106 None:intergenic 30.0%
CCTACAAGCATATAGTTAAA+TGG - chr5_2:55807084-55807103 Msa0777060:intron 30.0%
AACAAGTTGCATACATAACA+TGG - chr5_2:55807471-55807490 Msa0777060:CDS 30.0%
TAAAAAAGTTGAATTGTCGC+CGG - chr5_2:55807551-55807570 Msa0777060:intron 30.0%
AACATGAAATCCACTTGTAA+GGG + chr5_2:55807613-55807632 None:intergenic 30.0%
TAGAGCAACATAAGAATAGT+AGG - chr5_2:55807638-55807657 Msa0777060:CDS 30.0%
ATGAACTATGTGAAACTACA+GGG - chr5_2:55807820-55807839 Msa0777060:CDS 30.0%
CCTCTAAGTGAATTGATATT+TGG + chr5_2:55807907-55807926 None:intergenic 30.0%
CCAAATATCAATTCACTTAG+AGG - chr5_2:55807904-55807923 Msa0777060:intron 30.0%
! CGCTGTAAACTTTTATATTG+TGG + chr5_2:55808085-55808104 None:intergenic 30.0%
TGTGAGAAGTTAAAAAATGC+TGG + chr5_2:55808568-55808587 None:intergenic 30.0%
AAAGACTTAGTTGTTCTATC+AGG - chr5_2:55808625-55808644 Msa0777060:intron 30.0%
! TATTTTGTGTCAACTCTTGA+AGG + chr5_2:55808799-55808818 None:intergenic 30.0%
! CATGCTTTTGCTTATGATTT+TGG - chr5_2:55808928-55808947 Msa0777060:CDS 30.0%
TGGAGTTTCTATGATTAAGA+TGG - chr5_2:55802635-55802654 Msa0777060:intron 30.0%
GGAGTTTCTATGATTAAGAT+GGG - chr5_2:55802636-55802655 Msa0777060:intron 30.0%
! TGACCACAAAAAGCACAAAT+TGG + chr5_2:55801003-55801022 None:intergenic 35.0%
TTTATGATTGGCAATGCGTT+AGG + chr5_2:55801091-55801110 None:intergenic 35.0%
TTACGTTAACAAAGCAGTCA+TGG + chr5_2:55801180-55801199 None:intergenic 35.0%
! AGCAAACTTTTGGACCATAT+AGG + chr5_2:55801252-55801271 None:intergenic 35.0%
TATCCCAAAGCTCGTAATAA+AGG - chr5_2:55801298-55801317 Msa0777060:CDS 35.0%
GTCAAACAACTAGGTATCAA+TGG - chr5_2:55801428-55801447 Msa0777060:CDS 35.0%
AGTCGATGTATTCAAAACTG+CGG + chr5_2:55802027-55802046 None:intergenic 35.0%
! TATTGGTACCAAGTGTTACT+AGG - chr5_2:55802177-55802196 Msa0777060:intron 35.0%
AGATTCAAGATTTGCAAGCA+GGG - chr5_2:55802206-55802225 Msa0777060:intron 35.0%
TGTGAGAAGTTGAAAAATGG+AGG + chr5_2:55802255-55802274 None:intergenic 35.0%
AAGGACTTAGTTGTTCTATC+TGG - chr5_2:55802312-55802331 Msa0777060:intron 35.0%
!! GTTTCTAAAGTTAGCGCATT+TGG + chr5_2:55802358-55802377 None:intergenic 35.0%
! AATGCGCTAACTTTAGAAAC+AGG - chr5_2:55802358-55802377 Msa0777060:intron 35.0%
! AGCAAAATTGGTGTCTATGT+TGG + chr5_2:55802397-55802416 None:intergenic 35.0%
TTGCAAATTGGCAGCAAAAT+TGG + chr5_2:55802409-55802428 None:intergenic 35.0%
TAGGATGTGTCAACTTTGTT+AGG + chr5_2:55802486-55802505 None:intergenic 35.0%
AGTTGACACATCCTACTATA+AGG - chr5_2:55802491-55802510 Msa0777060:intron 35.0%
AAAGCTCTTGATCAGAATGA+AGG + chr5_2:55802539-55802558 None:intergenic 35.0%
!! CAAGAGCTTTTTAAAGGTGA+TGG - chr5_2:55802549-55802568 Msa0777060:intron 35.0%
TGGTTCTCAAAGTGATAAGT+TGG - chr5_2:55802569-55802588 Msa0777060:intron 35.0%
GATTCAACACCCATAACATA+TGG + chr5_2:55803230-55803249 None:intergenic 35.0%
ACCTCCATGATACAATTCAA+GGG + chr5_2:55803580-55803599 None:intergenic 35.0%
CCAGAAATTTCATAGAGCTT+GGG - chr5_2:55803654-55803673 Msa0777060:intron 35.0%
ACCGTAAGTAACTAAGTATC+CGG - chr5_2:55804140-55804159 Msa0777060:intron 35.0%
TCCGGATACTTAGTTACTTA+CGG + chr5_2:55804144-55804163 None:intergenic 35.0%
AGTAACTAAGTATCCGGATT+TGG - chr5_2:55804146-55804165 Msa0777060:intron 35.0%
! TGCGAAAATTTTCAATGGAG+AGG + chr5_2:55804174-55804193 None:intergenic 35.0%
ACTTTCTCTCTCATGATTGA+TGG - chr5_2:55804261-55804280 Msa0777060:intron 35.0%
! TTCTCTCAAGTTTTCTCATG+TGG + chr5_2:55804295-55804314 None:intergenic 35.0%
TGAAAGGATACTTAGGGATT+AGG + chr5_2:55804335-55804354 None:intergenic 35.0%
TTGAGTGGAGAGTTTATGAA+AGG + chr5_2:55804351-55804370 None:intergenic 35.0%
CACAATTCTACATTAGGGTT+TGG - chr5_2:55804383-55804402 Msa0777060:intron 35.0%
AGGGTTTGGGAAATCAAAAT+TGG - chr5_2:55804397-55804416 Msa0777060:intron 35.0%
GGGTTTGGGAAATCAAAATT+GGG - chr5_2:55804398-55804417 Msa0777060:intron 35.0%
GGTTTGGGAAATCAAAATTG+GGG - chr5_2:55804399-55804418 Msa0777060:intron 35.0%
TAAACATAGAACAAACCTGG+TGG - chr5_2:55804527-55804546 Msa0777060:intron 35.0%
GAGTTACTATTCTGAACTGA+AGG - chr5_2:55804628-55804647 Msa0777060:intron 35.0%
! GACTACAACAAAAGGGTTTT+TGG - chr5_2:55804871-55804890 Msa0777060:intron 35.0%
!!! GTTTTTGGTTCATAATCGCA+AGG - chr5_2:55804886-55804905 Msa0777060:intron 35.0%
TCTTCCGAATGAGACATTTA+AGG - chr5_2:55805447-55805466 Msa0777060:intron 35.0%
AGAGCCTTAAATGTCTCATT+CGG + chr5_2:55805454-55805473 None:intergenic 35.0%
! CATGAATCCTTCATTTGCTA+TGG - chr5_2:55805684-55805703 Msa0777060:intron 35.0%
ATTGAACAACATCGTTGCAT+AGG - chr5_2:55805863-55805882 Msa0777060:intron 35.0%
TACTTCTAGACCATCTATCA+GGG + chr5_2:55806343-55806362 None:intergenic 35.0%
CAACATCTTAGCTCAAATCA+AGG - chr5_2:55807058-55807077 Msa0777060:intron 35.0%
TTTATGATTGGCAATGCCTT+AGG + chr5_2:55807214-55807233 None:intergenic 35.0%
TGTCGCCGGAAAAATAAATT+AGG - chr5_2:55807565-55807584 Msa0777060:intron 35.0%
CAACATGAAATCCACTTGTA+AGG + chr5_2:55807614-55807633 None:intergenic 35.0%
AGCAACATAAGAATAGTAGG+TGG - chr5_2:55807641-55807660 Msa0777060:CDS 35.0%
CATGAACTATGTGAAACTAC+AGG - chr5_2:55807819-55807838 Msa0777060:CDS 35.0%
! CAATTCACTTAGAGGTTTTG+AGG - chr5_2:55807912-55807931 Msa0777060:intron 35.0%
ACATTGCGATTACAATTGGA+GGG + chr5_2:55808239-55808258 None:intergenic 35.0%
TACATTGCGATTACAATTGG+AGG + chr5_2:55808240-55808259 None:intergenic 35.0%
! TATTGGTACCAAGTGTTACT+AGG - chr5_2:55802177-55802196 Msa0777060:intron 35.0%
GAGAAGTTAAAAAATGCTGG+TGG + chr5_2:55808565-55808584 None:intergenic 35.0%
! ATCACAAATTTTCAGTCCCA+AGG - chr5_2:55808592-55808611 Msa0777060:intron 35.0%
!! GTCTTTAAGGTTTAGTCCTT+GGG + chr5_2:55808611-55808630 None:intergenic 35.0%
!! AGTCTTTAAGGTTTAGTCCT+TGG + chr5_2:55808612-55808631 None:intergenic 35.0%
CTTGAAGGAGTAGAATCAAA+TGG + chr5_2:55808784-55808803 None:intergenic 35.0%
!! TACGGCTTTGTTGCATAAAA+AGG - chr5_2:55808822-55808841 Msa0777060:intron 35.0%
!! ACGGCTTTGTTGCATAAAAA+GGG - chr5_2:55808823-55808842 Msa0777060:intron 35.0%
AAAGCTCTTGATCAGAATGA+AGG + chr5_2:55802539-55802558 None:intergenic 35.0%
! TCTGATCAAGAGCTTTTCAA+AGG - chr5_2:55808856-55808875 Msa0777060:CDS 35.0%
TGGTTCTCAAAGTGATAGAT+TGG - chr5_2:55808882-55808901 Msa0777060:CDS 35.0%
GTAACATAAAGCCACTTACT+GGG - chr5_2:55808971-55808990 Msa0777060:CDS 35.0%
TGCAATGGTAGGACTCAAAA+TGG + chr5_2:55801035-55801054 None:intergenic 40.0%
! ATTTGGAGTGAGCTTTGCAA+TGG + chr5_2:55801050-55801069 None:intergenic 40.0%
TTTAAGTGTGGAGGCCTATA+TGG - chr5_2:55801235-55801254 Msa0777060:CDS 40.0%
GCTCCTTTATTACGAGCTTT+GGG + chr5_2:55801304-55801323 None:intergenic 40.0%
TGCTCCTTTATTACGAGCTT+TGG + chr5_2:55801305-55801324 None:intergenic 40.0%
!! ACTGGCTTGCTCAAATAGAT+AGG + chr5_2:55801353-55801372 None:intergenic 40.0%
GAAACTACATAGGGTTGTGA+TGG - chr5_2:55801723-55801742 Msa0777060:intron 40.0%
AACATCACGTTTGCAAGCTT+TGG + chr5_2:55801859-55801878 None:intergenic 40.0%
AGTTGGGTGGTAAGCAATAT+TGG - chr5_2:55802160-55802179 Msa0777060:CDS 40.0%
CTCTTCTTCCTAGTAACACT+TGG + chr5_2:55802188-55802207 None:intergenic 40.0%
GAGATTCAAGATTTGCAAGC+AGG - chr5_2:55802205-55802224 Msa0777060:intron 40.0%
GAGAAGTTGAAAAATGGAGG+AGG + chr5_2:55802252-55802271 None:intergenic 40.0%
! GTCTCATGGACTAAACCTTA+AGG - chr5_2:55802293-55802312 Msa0777060:intron 40.0%
GACTTAGTTGTTCTATCTGG+TGG - chr5_2:55802315-55802334 Msa0777060:intron 40.0%
! AGGGCATGTCTTTTGCAAAT+TGG + chr5_2:55802421-55802440 None:intergenic 40.0%
CAAAAGACATGCCCTAGAAT+CGG - chr5_2:55802426-55802445 Msa0777060:intron 40.0%
GGTAACTTAAAGCCTCTTAC+CGG - chr5_2:55802657-55802676 Msa0777060:intron 40.0%
GTAACTTAAAGCCTCTTACC+GGG - chr5_2:55802658-55802677 Msa0777060:intron 40.0%
GTTTCACCTTACAAGGCAAT+AGG - chr5_2:55803297-55803316 Msa0777060:intron 40.0%
TTGGAACCTATTGCCTTGTA+AGG + chr5_2:55803306-55803325 None:intergenic 40.0%
ACCCTTGAATTGTATCATGG+AGG - chr5_2:55803576-55803595 Msa0777060:intron 40.0%
CACCTCCATGATACAATTCA+AGG + chr5_2:55803581-55803600 None:intergenic 40.0%
GCCAGAAATTTCATAGAGCT+TGG - chr5_2:55803653-55803672 Msa0777060:intron 40.0%
CCCAAGCTCTATGAAATTTC+TGG + chr5_2:55803657-55803676 None:intergenic 40.0%
! GTGCATTTTGTGTGATTGAG+TGG + chr5_2:55804366-55804385 None:intergenic 40.0%
TATGTGTTGAGTATGGCTCA+GGG + chr5_2:55804809-55804828 None:intergenic 40.0%
!!! TCTTGTTTTTTTGTGCGTGC+TGG + chr5_2:55805337-55805356 None:intergenic 40.0%
! TATGTTCCACCTTTTGCTTC+CGG + chr5_2:55805374-55805393 None:intergenic 40.0%
! ATGAGACATTTAAGGCTCTC+AGG - chr5_2:55805455-55805474 Msa0777060:intron 40.0%
AAACTGTTATAACGCTGGAG+AGG + chr5_2:55805808-55805827 None:intergenic 40.0%
TCCAGCGTTATAACAGTTTG+CGG - chr5_2:55805809-55805828 Msa0777060:intron 40.0%
CTACTTCTAGACCATCTATC+AGG + chr5_2:55806344-55806363 None:intergenic 40.0%
AGTATCTAGCTATAGAGAGG+TGG + chr5_2:55807030-55807049 None:intergenic 40.0%
GTGAGTATCTAGCTATAGAG+AGG + chr5_2:55807033-55807052 None:intergenic 40.0%
ATTAGGTGTGAGCTTTGCAA+TGG + chr5_2:55807173-55807192 None:intergenic 40.0%
! AGGGAAAGAGGTGCAAAAAT+CGG + chr5_2:55807594-55807613 None:intergenic 40.0%
AATCCACTTGTAAGGGAAAG+AGG + chr5_2:55807606-55807625 None:intergenic 40.0%
! TTTACAAGCTTTGTCGACAG+CGG + chr5_2:55807956-55807975 None:intergenic 40.0%
TGCATCAAATAACAGTTGGG+CGG - chr5_2:55808460-55808479 Msa0777060:intron 40.0%
GACTTAGTTGTTCTATCAGG+TGG - chr5_2:55808628-55808647 Msa0777060:intron 40.0%
GATGCACTAAGTTTAGAGAC+AGG - chr5_2:55808671-55808690 Msa0777060:intron 40.0%
! TGCATAATTGGTGTCTATGC+TGG + chr5_2:55808710-55808729 None:intergenic 40.0%
!! TTGCAAATGGGCTGCATAAT+TGG + chr5_2:55808722-55808741 None:intergenic 40.0%
TTATGCAGCCCATTTGCAAA+AGG - chr5_2:55808723-55808742 Msa0777060:intron 40.0%
! CAAGAGCTTTTCAAAGGTGA+TGG - chr5_2:55808862-55808881 Msa0777060:CDS 40.0%
GGTAACATAAAGCCACTTAC+TGG - chr5_2:55808970-55808989 Msa0777060:CDS 40.0%
AAGCCACTTACTGGGAAAAA+TGG - chr5_2:55808979-55808998 Msa0777060:CDS 40.0%
!! TCACCATTTTTCCCAGTAAG+TGG + chr5_2:55808985-55809004 None:intergenic 40.0%
AATTATTCGTGAGCCACGCA+TGG - chr5_2:55801129-55801148 Msa0777060:CDS 45.0%
ATTATTCGTGAGCCACGCAT+GGG - chr5_2:55801130-55801149 Msa0777060:CDS 45.0%
TCTTCTCACCAACGAAGGTA+GGG + chr5_2:55801770-55801789 None:intergenic 45.0%
! CTATCTGGTGGACACACAAT+TGG - chr5_2:55802327-55802346 Msa0777060:intron 45.0%
AAAGCCTCTTACCGGGAAAA+AGG - chr5_2:55802665-55802684 Msa0777060:intron 45.0%
AAGCCTCTTACCGGGAAAAA+GGG - chr5_2:55802666-55802685 Msa0777060:intron 45.0%
TTGGAAGGAATGCTTAAGGG+AGG + chr5_2:55803112-55803131 None:intergenic 45.0%
!! GGGTGTTGAATCTCAAAGAG+TGG - chr5_2:55803238-55803257 Msa0777060:intron 45.0%
GGCGAAAGAAGATGACTTCA+TGG - chr5_2:55803366-55803385 Msa0777060:intron 45.0%
CAATGGAGAGGATCCAAATC+CGG + chr5_2:55804162-55804181 None:intergenic 45.0%
ACATAGAACAAACCTGGTGG+AGG - chr5_2:55804530-55804549 Msa0777060:intron 45.0%
TGGAGAAGAGAAAGAGGAGA+AGG - chr5_2:55804564-55804583 Msa0777060:intron 45.0%
TTGAGACTGAGAGTTGAGAG+AGG - chr5_2:55804598-55804617 Msa0777060:intron 45.0%
TGAGACTGAGAGTTGAGAGA+GGG - chr5_2:55804599-55804618 Msa0777060:intron 45.0%
TAGGAATTGGGCTATTGGGT+TGG - chr5_2:55804716-55804735 Msa0777060:intron 45.0%
AGGAATTGGGCTATTGGGTT+GGG - chr5_2:55804717-55804736 Msa0777060:intron 45.0%
AACAAAGTAGAAGCAGAGCC+CGG - chr5_2:55804749-55804768 Msa0777060:intron 45.0%
ATGTGTTGAGTATGGCTCAG+GGG + chr5_2:55804808-55804827 None:intergenic 45.0%
GTATGTGTTGAGTATGGCTC+AGG + chr5_2:55804810-55804829 None:intergenic 45.0%
CAACGGGTATGTGTTGAGTA+TGG + chr5_2:55804816-55804835 None:intergenic 45.0%
TACTCAACACATACCCGTTG+TGG - chr5_2:55804816-55804835 Msa0777060:intron 45.0%
!!! TTTTTTTGTGCGTGCTGGCT+AGG + chr5_2:55805332-55805351 None:intergenic 45.0%
TATACTCTAGGTGAGGCTGA+TGG + chr5_2:55805554-55805573 None:intergenic 45.0%
GGGTGTTAATCCCTGATAGA+TGG - chr5_2:55806330-55806349 Msa0777060:intron 45.0%
AATTATTCGTGAGCCACGCA+TGG - chr5_2:55801129-55801148 Msa0777060:CDS 45.0%
ATTATTCGTGAGCCACGCAT+GGG - chr5_2:55801130-55801149 Msa0777060:CDS 45.0%
GATGAGCTAAGAAACGTCGA+AGG + chr5_2:55807450-55807469 None:intergenic 45.0%
GTGAAACTACAGGGTTGTGA+TGG - chr5_2:55807829-55807848 Msa0777060:CDS 45.0%
TCTTCTCACCGATGAAGGTA+GGG + chr5_2:55807876-55807895 None:intergenic 45.0%
GCATCAAATAACAGTTGGGC+GGG - chr5_2:55808461-55808480 Msa0777060:intron 45.0%
CTCTTCTGCCTAGTAACACT+TGG + chr5_2:55808501-55808520 None:intergenic 45.0%
CTATCAGGTGGTCACACAAT+TGG - chr5_2:55808640-55808659 Msa0777060:intron 45.0%
! AGGGCATGCCTTTTGCAAAT+GGG + chr5_2:55808734-55808753 None:intergenic 45.0%
CTGGGAAAAATGGTGAGATC+AGG - chr5_2:55808989-55809008 Msa0777060:CDS 45.0%
!!! TAATATAGAAATATAAATTT+TGG + chr5_2:55801603-55801622 None:intergenic 5.0%
!!! TTTTTTTTATGAATAAAAAA+AGG - chr5_2:55805306-55805325 Msa0777060:intron 5.0%
GGAGTGAGCTTTGCAATGGT+AGG + chr5_2:55801046-55801065 None:intergenic 50.0%
!! AGGGGTGTCATCGAGTAGAA+CGG + chr5_2:55801751-55801770 None:intergenic 50.0%
CTTCTCACCAACGAAGGTAG+GGG + chr5_2:55801769-55801788 None:intergenic 50.0%
GTCTTCTCACCAACGAAGGT+AGG + chr5_2:55801771-55801790 None:intergenic 50.0%
TGCAGTCTTCTCACCAACGA+AGG + chr5_2:55801775-55801794 None:intergenic 50.0%
AAGACATGCCCTAGAATCGG+CGG - chr5_2:55802429-55802448 Msa0777060:intron 50.0%
AGCCTCTTACCGGGAAAAAG+GGG - chr5_2:55802667-55802686 Msa0777060:intron 50.0%
! ATAGGCACTGTAGAGGAGCA+AGG + chr5_2:55803614-55803633 None:intergenic 50.0%
! ATGGCTCATAGGCACTGTAG+AGG + chr5_2:55803621-55803640 None:intergenic 50.0%
GGAGACTGGAGAAGAGAAAG+AGG - chr5_2:55804558-55804577 Msa0777060:intron 50.0%
ACAAAGTAGAAGCAGAGCCC+GGG - chr5_2:55804750-55804769 Msa0777060:intron 50.0%
! TACCCGTTGTGGTTTGTGCA+CGG - chr5_2:55804827-55804846 Msa0777060:intron 50.0%
ATCCGTGCACAAACCACAAC+GGG + chr5_2:55804832-55804851 None:intergenic 50.0%
GATCCGTGCACAAACCACAA+CGG + chr5_2:55804833-55804852 None:intergenic 50.0%
GAGTAGGGGTTCTTTGCAAG+TGG - chr5_2:55805114-55805133 Msa0777060:intron 50.0%
CAAGATGAACTAGGTAGCGC+CGG - chr5_2:55805352-55805371 Msa0777060:intron 50.0%
!! TAAGGCTCTCAGGACTAGCT+AGG - chr5_2:55805465-55805484 Msa0777060:intron 50.0%
GCCGCAAACTGTTATAACGC+TGG + chr5_2:55805813-55805832 None:intergenic 50.0%
!! GGGTAATGATGGATGGTACG+AGG + chr5_2:55806735-55806754 None:intergenic 50.0%
GGTGTGAGCTTTGCAATGGT+AGG + chr5_2:55807169-55807188 None:intergenic 50.0%
GCACCTCTTTCCCTTACAAG+TGG - chr5_2:55807600-55807619 Msa0777060:CDS 50.0%
GATGACACCCCTACCTTCAT+CGG - chr5_2:55807865-55807884 Msa0777060:intron 50.0%
CTTCTCACCGATGAAGGTAG+GGG + chr5_2:55807875-55807894 None:intergenic 50.0%
GTCTTCTCACCGATGAAGGT+AGG + chr5_2:55807877-55807896 None:intergenic 50.0%
TGCAGTCTTCTCACCGATGA+AGG + chr5_2:55807881-55807900 None:intergenic 50.0%
AGTTGGGCGGGCACAAATAT+TGG - chr5_2:55808473-55808492 Msa0777060:intron 50.0%
!! GAGGGCATGCCTTTTGCAAA+TGG + chr5_2:55808735-55808754 None:intergenic 50.0%
! CAAAAGGCATGCCCTCGAAT+TGG - chr5_2:55808739-55808758 Msa0777060:intron 50.0%
GTGAGATCAGGTGCAATTGC+AGG - chr5_2:55809001-55809020 Msa0777060:CDS 50.0%
GATGACACCCCTACCTTCGT+TGG - chr5_2:55801759-55801778 Msa0777060:intron 55.0%
!! TACCATCGCCGCCGATTCTA+GGG + chr5_2:55802440-55802459 None:intergenic 55.0%
!! TTACCATCGCCGCCGATTCT+AGG + chr5_2:55802441-55802460 None:intergenic 55.0%
GCCTCTTACCGGGAAAAAGG+GGG - chr5_2:55802668-55802687 Msa0777060:intron 55.0%
! TCCCCCTTTTTCCCGGTAAG+AGG + chr5_2:55802672-55802691 None:intergenic 55.0%
! CCTGATCTCCCCCTTTTTCC+CGG + chr5_2:55802679-55802698 None:intergenic 55.0%
GTGCCTATGAGCCATACCAG+TGG - chr5_2:55803626-55803645 Msa0777060:intron 55.0%
CCTATGAGCCATACCAGTGG+CGG - chr5_2:55803629-55803648 Msa0777060:intron 55.0%
!! GAAATTTCTGGCTCCGCCAC+TGG + chr5_2:55803645-55803664 None:intergenic 55.0%
ACAAACCTGGTGGAGGAGAG+TGG - chr5_2:55804537-55804556 Msa0777060:intron 55.0%
! TAGGTAGCGCCGGAAGCAAA+AGG - chr5_2:55805362-55805381 Msa0777060:intron 55.0%
AAGGCATGCCCTCGAATTGG+CGG - chr5_2:55808742-55808761 Msa0777060:intron 55.0%
TGTCATCGCCGCCAATTCGA+GGG + chr5_2:55808753-55808772 None:intergenic 55.0%
TTGTCATCGCCGCCAATTCG+AGG + chr5_2:55808754-55808773 None:intergenic 55.0%
AGCAACGATGCTCCCATGCG+TGG + chr5_2:55801145-55801164 None:intergenic 60.0%
CCGGGAAAAAGGGGGAGATC+AGG - chr5_2:55802676-55802695 Msa0777060:intron 60.0%
CCGCCACTGGTATGGCTCAT+AGG + chr5_2:55803632-55803651 None:intergenic 60.0%
!! TTCTGGCTCCGCCACTGGTA+TGG + chr5_2:55803640-55803659 None:intergenic 60.0%
AGTCTCCACTCTCCTCCACC+AGG + chr5_2:55804545-55804564 None:intergenic 60.0%
TGGTGGAGGAGAGTGGAGAC+TGG - chr5_2:55804544-55804563 Msa0777060:intron 60.0%
! GTAGCGCCGGAAGCAAAAGG+TGG - chr5_2:55805365-55805384 Msa0777060:intron 60.0%
AGCAACGATGCTCCCATGCG+TGG + chr5_2:55801145-55801164 None:intergenic 60.0%
TGCCCTAGAATCGGCGGCGA+TGG - chr5_2:55802435-55802454 Msa0777060:intron 65.0%
!! AGCTAGCCTGGGCTAGTGCC+CGG + chr5_2:55804771-55804790 None:intergenic 65.0%
! GGCACTAGCCCAGGCTAGCT+GGG - chr5_2:55804771-55804790 Msa0777060:intron 65.0%
! GCACTAGCCCAGGCTAGCTG+GGG - chr5_2:55804772-55804791 Msa0777060:intron 65.0%
! CACTAGCCCAGGCTAGCTGG+GGG - chr5_2:55804773-55804792 Msa0777060:intron 65.0%
! ACTAGCCCAGGCTAGCTGGG+GGG - chr5_2:55804774-55804793 Msa0777060:intron 65.0%
! CTACACCCCCCAGCTAGCCT+GGG + chr5_2:55804782-55804801 None:intergenic 65.0%
ACTACACCCCCCAGCTAGCC+TGG + chr5_2:55804783-55804802 None:intergenic 65.0%
!! GCTAGCCTGGGCTAGTGCCC+GGG + chr5_2:55804770-55804789 None:intergenic 70.0%
GGGCACTAGCCCAGGCTAGC+TGG - chr5_2:55804770-55804789 Msa0777060:intron 70.0%
CAGAGCCCGGGCACTAGCCC+AGG - chr5_2:55804762-55804781 Msa0777060:intron 75.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 55800986 55809041 55800986 ID=Msa0777060;Name=Msa0777060
chr5_2 mRNA 55800986 55809041 55800986 ID=Msa0777060-mRNA-1;Parent=Msa0777060;Name=Msa0777060-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|0.66|0.57|7|0|581
chr5_2 exon 55808832 55809041 55808832 ID=Msa0777060-mRNA-1:exon:16543;Parent=Msa0777060-mRNA-1
chr5_2 exon 55808098 55808292 55808098 ID=Msa0777060-mRNA-1:exon:16542;Parent=Msa0777060-mRNA-1
chr5_2 exon 55807571 55807865 55807571 ID=Msa0777060-mRNA-1:exon:16541;Parent=Msa0777060-mRNA-1
chr5_2 exon 55807330 55807561 55807330 ID=Msa0777060-mRNA-1:exon:16540;Parent=Msa0777060-mRNA-1
chr5_2 exon 55802709 55802862 55802709 ID=Msa0777060-mRNA-1:exon:16539;Parent=Msa0777060-mRNA-1
chr5_2 exon 55802094 55802186 55802094 ID=Msa0777060-mRNA-1:exon:16538;Parent=Msa0777060-mRNA-1
chr5_2 exon 55800986 55801552 55800986 ID=Msa0777060-mRNA-1:exon:16537;Parent=Msa0777060-mRNA-1
chr5_2 CDS 55808832 55809041 55808832 ID=Msa0777060-mRNA-1:cds;Parent=Msa0777060-mRNA-1
chr5_2 CDS 55808098 55808292 55808098 ID=Msa0777060-mRNA-1:cds;Parent=Msa0777060-mRNA-1
chr5_2 CDS 55807571 55807865 55807571 ID=Msa0777060-mRNA-1:cds;Parent=Msa0777060-mRNA-1
chr5_2 CDS 55807330 55807561 55807330 ID=Msa0777060-mRNA-1:cds;Parent=Msa0777060-mRNA-1
chr5_2 CDS 55802709 55802862 55802709 ID=Msa0777060-mRNA-1:cds;Parent=Msa0777060-mRNA-1
chr5_2 CDS 55802094 55802186 55802094 ID=Msa0777060-mRNA-1:cds;Parent=Msa0777060-mRNA-1
chr5_2 CDS 55800986 55801552 55800986 ID=Msa0777060-mRNA-1:cds;Parent=Msa0777060-mRNA-1
Gene Sequence

>Msa0777060

ATGGATTCTCGTATCCAATTTGTGCTTTTTGTGGTCACTTTTGCAACCATTTTGAGTCCTACCATTGCAAAGCTCACTCCAAATTATTATGGCAGAATTTGTCCTAACGCATTGCCAATCATAAAATCAATTGTTAAGCAAGCAATTATTCGTGAGCCACGCATGGGAGCATCGTTGCTACGTTTGCATTTCCATGACTGCTTTGTTAACGGTTGTGATGGATCCGTTCTACTCGATGACACCCCTACCTTCGTTGGTGAGAAGACTGCATTTCCAAATATCAATTCAATTAGAGGTTTTGAGGTTGTTGATAAAATTAAAGAAGCAGTTACCAAAGCTTGCAAACGTGATGTTGTATCTTGTGCCGATATTTTAGCTATAGCAGCTCGAGACTCTGTAGCCATATTGGGTGGTAAGCAATATTGGTACCAAGTGTTACTAGGAAGAAGAGATTCAAGATTTGCAAGCAGGGATGCAGCAAATACAAATCTTCCTCCTCCATTTTTCAACTTCTCACAACTCATCACAAATTTCAAGTCTCATGGACTAAACCTTAAGGACTTAGTTGTTCTATCTGGTGGACACACAATTGGATTTTCCAAATGCGCTAACTTTAGAAACAGGATCTACAATGACACCAACATAGACACCAATTTTGCTGCCAATTTGCAAAAGACATGCCCTAGAATCGGCGGCGATGCACCATTTGATTCTACACCTAACAAAGTTGACACATCCTACTATAAGGCTTTGTTGTATAAACAAGGTCTCCTTCATTCTGATCAAGAGCTTTTTAAAGGTGATGGTTCTCAAAGTGATAAGTTGGTGCAACTATATAGTAAAAATTCATATGCTTTTGCATATGATTTTGGAGTTTCTATGATTAAGATGGGTAACTTAAAGCCTCTTACCGGGAAAAAGGGGGAGATCAGTCCTACCATTGCAAAGCTCACACCTAATTATTATGACAAAATTTGTCCTAAGGCATTGCCAATCATAAAGTCAGTTGTTAAGCAAGCAATTATTCGTGAGCCACGCATGGGAGCATCGTTGCTTCGCTTGCATTTTCATGACTGCTTTGTTAACGGTTGTGATGGATCAGTTCTACTAGATGACACCCCTACCTTCATCGGTGAGAAGACTGCAATTCCAAATATCAATTCACTTAGAGGTTTTGAGTTGGGCGGGCACAAATATTGGTACCAAGTGTTACTAGGCAGAAGAGATTCAACATTTGCAAGCAAAGATACAGCAAATATAAATCTTCCACCAGCATTTTTTAACTTCTCACAACTCATCACAAATTTTCAGTCCCAAGGACTAAACCTTAAAGACTTAGTTGTTCTATCAGGTGGTCACACAATTGGATTTTCGAGATGCACTAAGTTTAGAGACAGGATATTCAATGACACCAGCATAGACACCAATTATGCAGCCCATTTGCAAAAGGCATGCCCTCGAATTGGCGGCGATGACAATTTAGCACCATTTGATTCTACTCCTTCAAGAGTTGACACAAAATACTATACGGCTTTGTTGCATAAAAAGGGTCTCCTTCATTCTGATCAAGAGCTTTTCAAAGGTGATGGTTCTCAAAGTGATAGATTGGTGCAACTATATAGTAAACATTCTCATGCTTTTGCTTATGATTTTGGAGTTTCTATGATTAAGATGGGTAACATAAAGCCACTTACTGGGAAAAATGGTGAGATCAGGTGCAATTGCAGGAAAGTTAACCAAATATGA

Protein sequence

>Msa0777060

MDSRIQFVLFVVTFATILSPTIAKLTPNYYGRICPNALPIIKSIVKQAIIREPRMGASLLRLHFHDCFVNGCDGSVLLDDTPTFVGEKTAFPNINSIRGFEVVDKIKEAVTKACKRDVVSCADILAIAARDSVAILGGKQYWYQVLLGRRDSRFASRDAANTNLPPPFFNFSQLITNFKSHGLNLKDLVVLSGGHTIGFSKCANFRNRIYNDTNIDTNFAANLQKTCPRIGGDAPFDSTPNKVDTSYYKALLYKQGLLHSDQELFKGDGSQSDKLVQLYSKNSYAFAYDFGVSMIKMGNLKPLTGKKGEISPTIAKLTPNYYDKICPKALPIIKSVVKQAIIREPRMGASLLRLHFHDCFVNGCDGSVLLDDTPTFIGEKTAIPNINSLRGFELGGHKYWYQVLLGRRDSTFASKDTANINLPPAFFNFSQLITNFQSQGLNLKDLVVLSGGHTIGFSRCTKFRDRIFNDTSIDTNYAAHLQKACPRIGGDDNLAPFDSTPSRVDTKYYTALLHKKGLLHSDQELFKGDGSQSDRLVQLYSKHSHAFAYDFGVSMIKMGNIKPLTGKNGEIRCNCRKVNQI*