AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1329260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1329260 MtrunA17_Chr8g0352231 98.124 1066 17 2 1 1063 13 1078 0.0 2165
Msa1329260 MtrunA17_Chr3g0088821 87.523 1066 130 3 1 1063 13 1078 0.0 1910
Msa1329260 MtrunA17_Chr7g0267731 79.310 1015 166 4 50 1063 15 986 0.0 1612
Msa1329260 MtrunA17_Chr3g0137951 68.908 1071 310 6 1 1063 32 1087 0.0 1493
Msa1329260 MtrunA17_Chr8g0383701 65.590 1084 327 15 4 1063 34 1095 0.0 1424
Msa1329260 MtrunA17_Chr4g0073711 65.704 1073 295 15 1 1063 29 1038 0.0 1410
Msa1329260 MtrunA17_Chr1g0201731 64.912 1083 339 14 1 1063 35 1096 0.0 1410
Msa1329260 MtrunA17_Chr2g0296991 63.114 1079 307 11 7 1063 35 1044 0.0 1389
Msa1329260 MtrunA17_Chr3g0078671 59.439 1070 376 11 1 1063 31 1049 0.0 1268
Msa1329260 MtrunA17_Chr8g0379241 71.463 834 218 8 234 1063 174 991 0.0 1253
Msa1329260 MtrunA17_Chr2g0284211 68.141 882 260 9 176 1051 99 965 0.0 1248
Msa1329260 MtrunA17_Chr1g0183381 65.885 853 261 6 215 1063 78 904 0.0 1205
Msa1329260 MtrunA17_Chr8g0364641 59.096 885 304 8 182 1063 152 981 0.0 1129
Msa1329260 MtrunA17_Chr8g0364641 61.194 67 26 0 1 67 29 95 1.28e-21 101
Msa1329260 MtrunA17_Chr5g0410641 50.279 897 337 17 229 1046 241 1107 0.0 869
Msa1329260 MtrunA17_Chr4g0039801 49.444 900 346 13 226 1046 259 1128 0.0 860
Msa1329260 MtrunA17_Chr1g0165411 49.052 897 338 14 227 1046 235 1089 0.0 831
Msa1329260 MtrunA17_Chr2g0297351 49.329 894 338 16 235 1048 154 1012 0.0 826
Msa1329260 MtrunA17_Chr7g0269741 49.264 883 357 17 236 1046 293 1156 0.0 820
Msa1329260 MtrunA17_Chr1g0165421 48.814 885 372 14 227 1046 249 1117 0.0 818
Msa1329260 MtrunA17_Chr7g0274751 42.726 873 308 22 219 1046 73 798 0.0 622
Msa1329260 MtrunA17_Chr2g0322361 33.507 767 418 16 285 1037 52 740 1.96e-130 414
Msa1329260 MtrunA17_Chr2g0322371 32.254 772 424 17 285 1043 47 732 2.38e-126 402
Msa1329260 MtrunA17_Chr3g0102541 33.526 692 362 15 263 947 29 629 2.24e-124 397
Msa1329260 MtrunA17_Chr3g0102531 33.382 683 356 15 272 947 38 628 7.07e-123 393
Msa1329260 MtrunA17_Chr2g0322351 33.509 761 416 17 285 1037 49 727 2.71e-122 392
Msa1329260 MtrunA17_Chr4g0025201 32.143 756 407 14 280 1016 43 711 3.77e-122 391
Msa1329260 MtrunA17_Chr3g0095791 28.886 772 444 15 255 1021 18 689 5.85e-106 347
Msa1329260 MtrunA17_Chr2g0307191 28.072 773 450 14 256 1022 19 691 5.84e-101 333
Msa1329260 MtrunA17_Chr3g0102551 37.405 393 219 8 255 633 23 402 4.45e-82 283
Msa1329260 MtrunA17_Chr3g0102551 30.293 307 197 9 740 1034 428 729 7.01e-34 140
Msa1329260 MtrunA17_Chr2g0322341 44.262 305 157 5 286 590 52 343 3.90e-81 268
Msa1329260 MtrunA17_Chr1g0186381 37.280 397 220 8 235 624 5 379 2.93e-73 258
Msa1329260 MtrunA17_Chr1g0186381 25.065 383 252 10 683 1040 365 737 4.08e-36 147
Msa1329260 MtrunA17_Chr4g0046401 37.037 378 211 6 256 626 24 381 6.21e-72 254
Msa1329260 MtrunA17_Chr4g0046401 32.153 339 220 6 705 1037 396 730 1.95e-44 172
Msa1329260 MtrunA17_Chr3g0077511 33.333 375 218 4 256 630 19 361 3.74e-64 231
Msa1329260 MtrunA17_Chr3g0077511 27.095 358 240 8 682 1022 340 693 3.05e-40 159
Msa1329260 MtrunA17_Chr2g0298581 32.011 378 225 5 256 633 19 364 6.76e-62 224
Msa1329260 MtrunA17_Chr2g0298581 28.049 328 226 6 700 1021 367 690 5.30e-37 149
Msa1329260 MtrunA17_Chr0c03g0490021 81.148 122 23 0 893 1014 1 122 1.89e-59 200
Msa1329260 MtrunA17_Chr2g0322331 31.707 369 237 7 678 1037 9 371 2.29e-54 194
Msa1329260 MtrunA17_Chr3g0126641 44.872 234 86 6 560 774 1 210 6.98e-50 175
Msa1329260 MtrunA17_Chr8g0355061 96.552 58 2 0 893 950 1 58 9.76e-33 120
Msa1329260 MtrunA17_Chr7g0252781 68.235 85 24 2 981 1063 6 89 1.33e-32 121
Msa1329260 MtrunA17_Chr7g0267741 69.841 63 19 0 1 63 1 63 1.05e-28 109
Msa1329260 MtrunA17_Chr2g0307241 35.625 160 94 3 256 415 19 169 1.76e-27 111
Msa1329260 MtrunA17_Chr3g0094861 35.673 171 91 6 1 167 29 184 1.69e-21 97.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1329260 AT5G05170.1 85.070 1065 146 6 1 1063 12 1065 0.0 1870
Msa1329260 AT4G32410.1 68.750 1056 301 8 1 1048 31 1065 0.0 1483
Msa1329260 AT2G25540.1 66.445 1052 320 8 1 1049 25 1046 0.0 1459
Msa1329260 AT5G17420.1 66.854 1068 279 14 1 1063 29 1026 0.0 1429
Msa1329260 AT5G44030.2 62.624 1105 328 11 2 1063 16 1078 0.0 1405
Msa1329260 AT5G44030.1 63.153 1091 316 11 2 1063 16 1049 0.0 1400
Msa1329260 AT5G09870.1 64.618 1074 327 15 4 1063 34 1068 0.0 1395
Msa1329260 AT5G64740.1 64.459 1072 347 15 4 1063 34 1083 0.0 1384
Msa1329260 AT2G21770.1 62.881 1083 349 14 4 1063 34 1086 0.0 1376
Msa1329260 AT4G39350.1 64.339 1074 344 11 4 1063 34 1082 0.0 1360
Msa1329260 AT4G18780.1 67.978 890 265 9 180 1063 105 980 0.0 1249
Msa1329260 AT4G18780.1 47.170 53 28 0 9 61 9 61 5.50e-11 67.4
Msa1329260 AT5G44030.3 73.446 772 174 5 321 1063 1 770 0.0 1194
Msa1329260 AT3G03050.1 50.169 885 334 17 239 1046 277 1131 0.0 851
Msa1329260 AT1G02730.1 50.056 897 342 18 233 1046 295 1168 0.0 835
Msa1329260 AT5G16910.1 49.379 885 338 16 239 1046 280 1131 0.0 832
Msa1329260 AT4G38190.1 48.036 891 339 13 235 1048 251 1094 0.0 830
Msa1329260 AT2G33100.2 48.946 901 333 17 235 1046 162 1024 0.0 823
Msa1329260 AT2G33100.1 48.946 901 333 17 235 1046 162 1024 0.0 823
Msa1329260 AT1G32180.1 47.514 905 352 16 229 1044 96 966 0.0 798
Msa1329260 AT1G32180.2 47.514 905 352 16 229 1044 96 966 0.0 798
Msa1329260 AT2G32530.1 31.955 798 445 17 240 1018 10 728 2.15e-123 395
Msa1329260 AT2G32620.1 33.509 758 404 17 284 1018 50 730 1.73e-122 393
Msa1329260 AT4G15320.5 32.590 807 428 22 240 1016 10 730 7.38e-121 389
Msa1329260 AT2G32610.1 30.686 831 465 19 240 1042 10 757 1.03e-120 389
Msa1329260 AT4G15320.3 32.590 807 428 22 240 1016 10 730 1.45e-120 388
Msa1329260 AT2G32540.1 31.726 788 427 17 283 1042 49 753 7.73e-119 384
Msa1329260 AT4G15320.4 32.108 816 435 22 240 1016 10 745 1.98e-117 380
Msa1329260 AT4G15290.1 32.765 763 399 21 284 1016 50 728 1.12e-113 370
Msa1329260 AT2G32620.3 36.271 590 299 12 284 869 50 566 2.84e-112 361
Msa1329260 AT2G32620.4 33.097 704 379 15 337 1018 1 634 1.11e-111 361
Msa1329260 AT4G15320.2 32.105 760 365 21 240 946 10 671 3.62e-105 348
Msa1329260 AT2G32620.2 36.059 538 268 11 284 817 50 515 1.95e-100 327
Msa1329260 AT4G15320.1 30.424 802 378 21 240 952 10 720 2.17e-97 328
Msa1329260 AT1G55850.1 41.299 385 202 8 249 626 26 393 4.07e-86 294
Msa1329260 AT1G55850.1 27.950 322 215 7 722 1034 406 719 4.80e-33 137
Msa1329260 AT4G24010.1 38.046 389 215 9 248 628 19 389 8.11e-76 266
Msa1329260 AT4G24010.1 32.660 297 190 4 729 1020 413 704 1.25e-42 168
Msa1329260 AT4G23990.1 37.662 385 216 8 248 624 38 406 1.51e-74 262
Msa1329260 AT4G23990.1 33.775 302 186 6 723 1018 428 721 4.24e-43 169
Msa1329260 AT4G24000.1 36.856 388 214 9 248 628 16 379 7.16e-72 254
Msa1329260 AT4G24000.1 31.987 297 188 6 729 1018 403 692 3.65e-41 163
Msa1329260 AT4G23990.2 33.775 302 186 6 723 1018 214 507 1.23e-43 167
Msa1329260 AT4G23990.2 43.229 192 100 5 440 624 3 192 4.54e-38 150
Msa1329260 AT4G24000.2 31.987 297 188 6 729 1018 211 500 9.51e-42 162
Msa1329260 AT4G24000.2 43.590 195 94 6 440 628 3 187 2.34e-38 151

Find 301 sgRNAs with CRISPR-Local

Find 510 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCCTTTCCTTAAAGGTCTTA+TGG 0.125123 8_4:-47743495 Msa1329260:CDS
GAATTTAAAATTCGTATTAA+TGG 0.125611 8_4:-47746831 Msa1329260:CDS
GCCTCCTTCAGAAGAGTTTC+TGG 0.159532 8_4:+47745333 None:intergenic
CATCTCTACCCTTTCCTTAA+AGG 0.169184 8_4:-47743503 Msa1329260:CDS
CATCAGAGTTTGCGAGAAAA+TGG 0.190245 8_4:-47747107 Msa1329260:CDS
CAGGATTGTTGACGCAAAAT+TGG 0.191651 8_4:-47748469 Msa1329260:CDS
GAAACTTCCTTATCATAATT+TGG 0.223992 8_4:+47748846 None:intergenic
CCTAAGCGGCCAGCATTTAA+AGG 0.235067 8_4:-47744800 Msa1329260:CDS
CAACAGATAGGATGGATTTA+TGG 0.246037 8_4:-47744893 Msa1329260:intron
CAATGGTCGGCGTTCGATTC+TGG 0.255290 8_4:+47743468 None:intergenic
GTTAGGATAAACAACTAAAT+TGG 0.257485 8_4:-47743107 Msa1329260:three_prime_UTR
GTCACAGAAGATATTCTTAC+TGG 0.258985 8_4:-47744866 Msa1329260:CDS
AAAGCATATGCTTTGGTGTT+TGG 0.262964 8_4:-47743318 Msa1329260:three_prime_UTR
CAGTACCGTTGACCCGTTAA+AGG 0.270603 8_4:-47747256 Msa1329260:CDS
ATTCCACACTCCTCAGCTTT+AGG 0.271618 8_4:+47743362 None:intergenic
AAGATTTGCGGGGAAAATAT+TGG 0.271638 8_4:-47749943 Msa1329260:CDS
AAGCATATGCTTTGGTGTTT+GGG 0.287269 8_4:-47743317 Msa1329260:three_prime_UTR
TTAGCAACTTAGCTAGTATA+TGG 0.288332 8_4:-47743913 Msa1329260:CDS
CCTTTCCTTAAAGGTCTTAT+GGG 0.294045 8_4:-47743494 Msa1329260:CDS
GTTTGCCATATCCTGGATAT+TGG 0.295709 8_4:-47747477 Msa1329260:CDS
ACAGGTAGTCCTGCAGTTAT+TGG 0.299000 8_4:-47749011 Msa1329260:intron
GGGTTCAATATTATACTTCT+TGG 0.299004 8_4:+47747074 None:intergenic
GCTCTGAAATCTTCTGCTTT+TGG 0.307620 8_4:+47748919 None:intergenic
GATATTGAAGAAGGAGTAGA+AGG 0.310085 8_4:-47745731 Msa1329260:intron
TTCAATAGGACGGCTTTATA+CGG 0.310727 8_4:-47745914 Msa1329260:CDS
GGTGAAGTTTGTGTCGATTC+CGG 0.313503 8_4:+47743730 None:intergenic
CAAGTGCTTCGATGGGCTTT+AGG 0.320242 8_4:-47744743 Msa1329260:CDS
CAATCATGGGGTCCACTCTT+TGG 0.320574 8_4:-47743557 Msa1329260:CDS
ATTTAGTTGTTTATCCTAAC+AGG 0.322710 8_4:+47743110 None:intergenic
TGCATTACCCACCCTTCTTC+CGG 0.332606 8_4:+47746783 None:intergenic
CTGATCCAATATCCAGGATA+TGG 0.337785 8_4:+47747472 None:intergenic
GGTGGAGAAATGAACAGTTT+TGG 0.339537 8_4:-47743814 Msa1329260:CDS
GGCGTCCCATAAGACCTTTA+AGG 0.342891 8_4:+47743489 None:intergenic
TACCTTTATGCCTCTTGTAT+CGG 0.343738 8_4:+47749803 None:intergenic
TGATTAACATCGGACGAATA+TGG 0.346981 8_4:+47748615 None:intergenic
TCTTGAATTCAATTATGATT+TGG 0.348596 8_4:-47748952 Msa1329260:CDS
CATCAAACCTCTGTGGAAAC+TGG 0.350767 8_4:+47746189 None:intergenic
TCCGCAATGCATATGCATTA+TGG 0.352287 8_4:-47747526 Msa1329260:CDS
TCCGTCTTCATCTGATGCTT+TGG 0.352362 8_4:+47743700 None:intergenic
CCTTTAAATGCTGGCCGCTT+AGG 0.358966 8_4:+47744800 None:intergenic
CAGTTTCCACAGAGGTTTGA+TGG 0.361278 8_4:-47746188 Msa1329260:CDS
CACGAGAAACATAGACTAAA+CGG 0.365557 8_4:+47746494 None:intergenic
CCATCTCATCTCGAGGATTC+CGG 0.368526 8_4:+47743859 None:intergenic
ATCAAGCATGCAAGATTTGC+GGG 0.377625 8_4:-47749954 Msa1329260:CDS
GATACTCACAAGTGCATTCA+TGG 0.378195 8_4:+47746432 None:intergenic
AGATTTGCGGGGAAAATATT+GGG 0.381899 8_4:-47749942 Msa1329260:CDS
GTATCTGCTGTCCTTACTAA+TGG 0.381961 8_4:-47746323 Msa1329260:CDS
ACCTTTATGCCTCTTGTATC+GGG 0.388601 8_4:+47749804 None:intergenic
AAGATTTCAGAGCGCATGTT+GGG 0.398508 8_4:-47748909 Msa1329260:CDS
AGTTGACTATCCAGTGGATA+AGG 0.399259 8_4:-47747190 Msa1329260:CDS
TGATGGAATAGAAACCTTCC+TGG 0.401422 8_4:+47747634 None:intergenic
TATCGGTTATATGCGAGATT+TGG 0.403289 8_4:-47747499 Msa1329260:CDS
GCAGCTTGGCTTGTGCTCAT+TGG 0.404444 8_4:+47748384 None:intergenic
TCAACAGTGGTTACCAATCA+TGG 0.406386 8_4:-47743571 Msa1329260:CDS
TGGTCTCTGACGTTATTTCC+AGG 0.406899 8_4:+47746744 None:intergenic
CCCCTCTTTCAGAAGCAGCT+TGG 0.408561 8_4:+47748370 None:intergenic
ACCCGATACAAGAGGCATAA+AGG 0.408580 8_4:-47749805 Msa1329260:intron
TTTCTTTCAATCTTCGCAAC+CGG 0.413406 8_4:-47743878 Msa1329260:CDS
ACGCTTCACCCCACCAGCTA+TGG 0.414105 8_4:+47748650 None:intergenic
AGATATGTTTCGCGGTTGAC+AGG 0.418534 8_4:+47747434 None:intergenic
CGGTTGACAGGAAGCCACTT+AGG 0.418757 8_4:+47747446 None:intergenic
GCAAACATGTTTACCGAGGT+TGG 0.421658 8_4:+47746217 None:intergenic
ACGAGAAACATAGACTAAAC+GGG 0.422412 8_4:+47746495 None:intergenic
CATCCAGTACCGACATAAAC+AGG 0.422858 8_4:+47745941 None:intergenic
AAGCTCGGCAGCCTCTTTCC+AGG 0.422861 8_4:-47747652 Msa1329260:CDS
AGATTTGGTTTGCCATATCC+TGG 0.425778 8_4:-47747484 Msa1329260:CDS
TGATCACCCAATGTTGTCAT+TGG 0.425936 8_4:+47749973 None:intergenic
AGGATTGTTGACGCAAAATT+GGG 0.426564 8_4:-47748468 Msa1329260:CDS
ACAGATAAATCTGAGAGGTT+TGG 0.428706 8_4:-47745978 Msa1329260:intron
CGGACGAATATGGAAGACTA+TGG 0.429066 8_4:+47748625 None:intergenic
ACGAGTGGAGGCTCCTTTAA+CGG 0.429431 8_4:+47747243 None:intergenic
TTAGCCGACATTGTCCCATC+TGG 0.429596 8_4:-47744703 Msa1329260:CDS
TTATCCTAACAGGACCCTAA+TGG 0.434721 8_4:+47743120 None:intergenic
AGAGGTTTGATGGTATTGAT+AGG 0.435261 8_4:-47746178 Msa1329260:CDS
GTCTTCATCTGATGCTTTGG+AGG 0.435673 8_4:+47743703 None:intergenic
TGCGAAGGCAACGAAAGTTC+CGG 0.435736 8_4:-47746802 Msa1329260:CDS
CAACCAACCTGGATCATTCC+CGG 0.436582 8_4:+47746720 None:intergenic
CGCCGACCATTGTTGTGGTC+TGG 0.437647 8_4:-47743457 Msa1329260:CDS
CAGTTGACACTCGGGCGATC+AGG 0.437776 8_4:-47748882 Msa1329260:CDS
ACAGAAGATTGATTACTTGA+AGG 0.441414 8_4:-47747028 Msa1329260:CDS
AGAACAATGACCAATCGATA+TGG 0.441429 8_4:+47747599 None:intergenic
TGTTATCAGCTGTGGTTATG+AGG 0.442711 8_4:-47745304 Msa1329260:CDS
TTTATTATGAGAAGCGTTGT+TGG 0.443878 8_4:+47743629 None:intergenic
AGAGGTTTGGATGGCATTCA+AGG 0.444572 8_4:-47745965 Msa1329260:CDS
GTACTGGATGTGTCTTCAAT+AGG 0.444583 8_4:-47745928 Msa1329260:CDS
GATGACATTGAGAGCCTCTC+AGG 0.445005 8_4:+47748675 None:intergenic
TATGAGTATGAAAGGAAAGA+TGG 0.447900 8_4:-47749853 Msa1329260:CDS
CAAAGAGTGGACCCCATGAT+TGG 0.448462 8_4:+47743558 None:intergenic
TTTCTCACAATCACATTCCT+AGG 0.449355 8_4:-47748827 Msa1329260:CDS
AATATTGGGAAGACGGTTGA+TGG 0.450142 8_4:-47749928 Msa1329260:CDS
AACCTGGTTGGAGTTGTTGC+TGG 0.450508 8_4:-47743608 Msa1329260:CDS
CACCAGCTTTCTTGTGATGT+TGG 0.453262 8_4:+47746455 None:intergenic
GGTCTACTAAAAGTACTTGC+CGG 0.454867 8_4:-47743749 Msa1329260:CDS
GACTGAAGATCGGCACAGTT+GGG 0.455525 8_4:+47745759 None:intergenic
GCATTATCGGTTAACAAATC+CGG 0.457474 8_4:-47747549 Msa1329260:CDS
TGTCCCATCTGGTATGGTTA+TGG 0.458970 8_4:-47744692 Msa1329260:CDS
AAGAATAGAAAGTACGGTAT+TGG 0.460314 8_4:+47747215 None:intergenic
AACTGTGCCGATCTTCAGTC+TGG 0.460786 8_4:-47745756 Msa1329260:CDS
ATAAGAAAGGTCCATTAGTA+AGG 0.462687 8_4:+47746312 None:intergenic
AGATGCACGCCCGTGGTTGG+CGG 0.462818 8_4:-47744838 Msa1329260:CDS
CGAGTGGAGGCTCCTTTAAC+GGG 0.463951 8_4:+47747244 None:intergenic
TTGGGGTGGCAGTTGACACT+CGG 0.465727 8_4:-47748891 Msa1329260:CDS
AAACAACAGCAAGGCTTTGA+GGG 0.466023 8_4:-47746264 Msa1329260:CDS
TACACCATTAGGGTCCTGTT+AGG 0.467143 8_4:-47743124 Msa1329260:three_prime_UTR
GATGATTATGAGAAAAGATT+CGG 0.467264 8_4:-47745420 Msa1329260:CDS
AGAAGGGGAATGGCAGTGAC+TGG 0.468948 8_4:+47744617 None:intergenic
TCATAGCAAAGCCGACAAAC+AGG 0.471666 8_4:+47749871 None:intergenic
CCAGTGACTCTTGTAGTAAA+CGG 0.472766 8_4:+47743386 None:intergenic
CAAACATGTTTACCGAGGTT+GGG 0.473637 8_4:+47746218 None:intergenic
ATCATCAAATACATCAGATC+TGG 0.473942 8_4:+47748332 None:intergenic
AGTTCAAAATCTAGCAAGAA+AGG 0.474600 8_4:-47745815 Msa1329260:CDS
ATCAGAGTTTGCGAGAAAAT+GGG 0.474953 8_4:-47747106 Msa1329260:CDS
CAAGATGGTACACCGTGGCC+TGG 0.474978 8_4:-47746762 Msa1329260:CDS
GGTCCTGTTTATGTCGGTAC+TGG 0.476414 8_4:-47745944 Msa1329260:CDS
CAGAACTCTACATGTTCAAA+TGG 0.479984 8_4:-47743670 Msa1329260:CDS
GGAAAGCCAATGACAACATT+GGG 0.481540 8_4:-47749979 Msa1329260:exon
TTCTTGTGATGTTGGAAACC+TGG 0.482128 8_4:+47746463 None:intergenic
GCTGCTTCTGAAAGAGGGGC+TGG 0.483591 8_4:-47748366 Msa1329260:CDS
GTTTCTCGTGAAAAGCGTCC+AGG 0.484428 8_4:-47746481 Msa1329260:CDS
TTATGAGGATAAATCAGAAT+GGG 0.486219 8_4:-47745289 Msa1329260:CDS
GTCTAAACCAAGTGCTTCGA+TGG 0.486486 8_4:-47744751 Msa1329260:CDS
CGAAGTACCACTCGGGTGCA+CGG 0.486841 8_4:+47747052 None:intergenic
AAATAACGTCAGAGACCATC+CGG 0.487878 8_4:-47746739 Msa1329260:CDS
TAGACGATCAGAAAGATTGA+TGG 0.487942 8_4:+47744769 None:intergenic
CCATAAGACCTTTAAGGAAA+GGG 0.489767 8_4:+47743495 None:intergenic
TATGGATTTATCCTAGATGA+TGG 0.489787 8_4:+47747617 None:intergenic
GAAGTACCACTCGGGTGCAC+GGG 0.492005 8_4:+47747053 None:intergenic
ATATTATACTTCTTGGTGAA+AGG 0.492686 8_4:+47747081 None:intergenic
TGTAATTATATAATTGTGGT+AGG 0.493190 8_4:-47743292 Msa1329260:three_prime_UTR
GCCAAGCTGCTTCTGAAAGA+GGG 0.493262 8_4:-47748371 Msa1329260:CDS
TAAACAACAGCAAGGCTTTG+AGG 0.494906 8_4:-47746265 Msa1329260:CDS
CTCGGGCGATCAGGAGAGCT+TGG 0.495198 8_4:-47748873 Msa1329260:CDS
GCAACGAAAGTTCCGGAAGA+AGG 0.496806 8_4:-47746795 Msa1329260:CDS
AGACTGAAGATCGGCACAGT+TGG 0.497387 8_4:+47745758 None:intergenic
TCAAGATGCACGCCCGTGGT+TGG 0.497845 8_4:-47744841 Msa1329260:CDS
ATCTGATGCTTTGGAGGTGA+CGG 0.498166 8_4:+47743709 None:intergenic
CAGTGTCAAGTCCTCCACTT+TGG 0.498952 8_4:+47746533 None:intergenic
GTCTATCGAGATATGTTTCG+CGG 0.499533 8_4:+47747426 None:intergenic
AGGTTTCTATTCCATCATCT+AGG 0.500584 8_4:-47747628 Msa1329260:CDS
AGACCATCCGGGAATGATCC+AGG 0.503664 8_4:-47746727 Msa1329260:intron
GGAGATAGTGAAGAGGAGGT+AGG 0.506878 8_4:-47748990 Msa1329260:CDS
CTAAAGCCCATCGAAGCACT+TGG 0.507939 8_4:+47744744 None:intergenic
CAAGGATCGTAGAGCAATGA+AGG 0.508673 8_4:-47746983 Msa1329260:intron
TTTATGTTCAACAGATAGGA+TGG 0.511261 8_4:-47744901 Msa1329260:intron
ATTGGTCATTGTTCTGCGAC+TGG 0.512176 8_4:-47747591 Msa1329260:CDS
ATGAGTATGAAAGGAAAGAT+GGG 0.512365 8_4:-47749852 Msa1329260:CDS
CGCTTCACCCCACCAGCTAT+GGG 0.512486 8_4:+47748651 None:intergenic
CAATCAAGATTCAATAAGAA+AGG 0.513986 8_4:+47746299 None:intergenic
GTTATGAGGATAAATCAGAA+TGG 0.517391 8_4:-47745290 Msa1329260:CDS
CCGGAATCCTCGAGATGAGA+TGG 0.517421 8_4:-47743859 Msa1329260:CDS
GGTTGACAGGAAGCCACTTA+GGG 0.517560 8_4:+47747447 None:intergenic
CGGGGAAAATATTGGGAAGA+CGG 0.517788 8_4:-47749935 Msa1329260:CDS
TCAATGTCATCACCCATAGC+TGG 0.517997 8_4:-47748663 Msa1329260:CDS
CAACAGTGGTTACCAATCAT+GGG 0.518614 8_4:-47743570 Msa1329260:CDS
CAAGCATCACATGCAATGAA+TGG 0.520477 8_4:+47749901 None:intergenic
GGAGGCTATGTGCTTTATGA+TGG 0.520591 8_4:-47746243 Msa1329260:CDS
GGATTGTAATTATATAATTG+TGG 0.520767 8_4:-47743296 Msa1329260:three_prime_UTR
GAAGACTAAAGTGGCTTGAA+AGG 0.520938 8_4:-47744667 Msa1329260:CDS
TATTGGAGATAGTGAAGAGG+AGG 0.522790 8_4:-47748994 Msa1329260:CDS
AGCCAAGCTGCTTCTGAAAG+AGG 0.523132 8_4:-47748372 Msa1329260:CDS
GGGAAAGCCAATGACAACAT+TGG 0.524995 8_4:-47749980 Msa1329260:exon
TGGCGCTCCAAATTATGATA+AGG 0.527613 8_4:-47748853 Msa1329260:CDS
GGAGAGAAAGAGTTGACGGC+TGG 0.528013 8_4:-47748434 Msa1329260:CDS
ATTCTTGTGCAGCAAATACC+AGG 0.530255 8_4:-47748488 Msa1329260:intron
GATAGTGAAGAGGAGGTAGG+AGG 0.532853 8_4:-47748987 Msa1329260:CDS
GATCAAGCATGCAAGATTTG+CGG 0.533245 8_4:-47749955 Msa1329260:CDS
CGACATTGTCCCATCTGGTA+TGG 0.534500 8_4:-47744698 Msa1329260:CDS
ATAGAAACCTTCCTGGAAAG+AGG 0.539442 8_4:+47747641 None:intergenic
GGTGCAGAACCTTTAAATGC+TGG 0.540880 8_4:+47744791 None:intergenic
GAACAAGTTCATCATCCCTC+AGG 0.542663 8_4:-47744558 Msa1329260:intron
TCACTATCTCCAATAACTGC+AGG 0.544967 8_4:+47749002 None:intergenic
GCAAGGTACAATACATGAGA+AGG 0.545766 8_4:+47744600 None:intergenic
TCCTGCTATGTCTCTGATGA+CGG 0.546583 8_4:-47747165 Msa1329260:CDS
TTCCAACATCACAAGAAAGC+TGG 0.547342 8_4:-47746457 Msa1329260:CDS
TAGGATAAATCCATATCGAT+TGG 0.547695 8_4:-47747609 Msa1329260:CDS
AATGCATATGCATTGCGGAC+CGG 0.549067 8_4:+47747530 None:intergenic
GACTCTACGTTGATGGAGAA+TGG 0.550155 8_4:-47745378 Msa1329260:CDS
TTGGGTTATCGGTGGCGTGT+CGG 0.553093 8_4:-47743795 Msa1329260:CDS
GGCTTTGCTATGAGTATGAA+AGG 0.553279 8_4:-47749861 Msa1329260:CDS
AACTGAAAGAATAGAAAGTA+CGG 0.553701 8_4:+47747209 None:intergenic
GTGTCTTGTATAGATATGAT+CGG 0.553736 8_4:-47747320 Msa1329260:intron
ATTATGAGAAGCGTTGTTGG+AGG 0.553924 8_4:+47743632 None:intergenic
TGTCTTGTATAGATATGATC+GGG 0.555398 8_4:-47747319 Msa1329260:intron
AGGGAACTGATCCAATATCC+AGG 0.555674 8_4:+47747466 None:intergenic
CCCATAAGACCTTTAAGGAA+AGG 0.556933 8_4:+47743494 None:intergenic
CTTCTCATAATAAACCTGGT+TGG 0.557674 8_4:-47743620 Msa1329260:CDS
AAAGAAAACAGTATTACGAT+TGG 0.558410 8_4:+47746142 None:intergenic
CCGTTTACTACAAGAGTCAC+TGG 0.559201 8_4:-47743386 Msa1329260:CDS
CTGACGTTATTTCCAGGCCA+CGG 0.560181 8_4:+47746750 None:intergenic
TAGCAGGAAACCTTATCCAC+TGG 0.560549 8_4:+47747180 None:intergenic
GCTATTCATGTTATCAGCTG+TGG 0.560849 8_4:-47745312 Msa1329260:CDS
CAATGCATATGCATTATGGC+TGG 0.561424 8_4:-47747522 Msa1329260:CDS
CTTCTGTGCGAAGTACCACT+CGG 0.561697 8_4:+47747044 None:intergenic
GTATATAGACCGCCAACCAC+GGG 0.563957 8_4:+47744829 None:intergenic
GTCATCACCCATAGCTGGTG+GGG 0.564796 8_4:-47748658 Msa1329260:CDS
TTATGTTTCACTTTAAGAGG+AGG 0.565471 8_4:+47745884 None:intergenic
GCATGGAGAGAAAGAGTTGA+CGG 0.566374 8_4:-47748438 Msa1329260:CDS
TATTGGATCAGTTCCCTAAG+TGG 0.569590 8_4:-47747460 Msa1329260:CDS
CAAAATTGGGCAATGTAGCA+TGG 0.570144 8_4:-47748455 Msa1329260:CDS
AAGAAAAGTTTACCAAAGAG+TGG 0.570487 8_4:+47743545 None:intergenic
GAAGATTTCAGAGCGCATGT+TGG 0.570992 8_4:-47748910 Msa1329260:CDS
CCCATCTGGTATGGTTATGG+TGG 0.571659 8_4:-47744689 Msa1329260:CDS
AGTCTGGAGGATATTGAAGA+AGG 0.572692 8_4:-47745740 Msa1329260:CDS
CAACGAAAGTTCCGGAAGAA+GGG 0.573845 8_4:-47746794 Msa1329260:CDS
TCGGCAGCCTCTTTCCAGGA+AGG 0.573890 8_4:-47747648 Msa1329260:CDS
AGACGATCAGAAAGATTGAT+GGG 0.574627 8_4:+47744770 None:intergenic
CAGAGTGATGACAGAAACCC+AGG 0.574768 8_4:+47745857 None:intergenic
TCTTTCAGTTGACTATCCAG+TGG 0.577758 8_4:-47747196 Msa1329260:CDS
TTCGTGAGAAGACAGACAGC+TGG 0.579072 8_4:+47744578 None:intergenic
TTTCTGTCATCACTCTGTGG+TGG 0.582459 8_4:-47745851 Msa1329260:CDS
TGGGGTGGCAGTTGACACTC+GGG 0.583009 8_4:-47748890 Msa1329260:CDS
ACAATACATGAGAAGGGGAA+TGG 0.583392 8_4:+47744607 None:intergenic
ATCTCGATAGACTTGCACTA+AGG 0.583516 8_4:-47747415 Msa1329260:intron
ATATGCATTATGGCTGGTAT+CGG 0.584419 8_4:-47747516 Msa1329260:CDS
TCTTGTCCACTTGTCAGCCT+AGG 0.584904 8_4:+47748810 None:intergenic
CGAAAGTTCCGGAAGAAGGG+TGG 0.585304 8_4:-47746791 Msa1329260:CDS
ATGTCATCACCCATAGCTGG+TGG 0.585365 8_4:-47748660 Msa1329260:CDS
TCGAACGCCGACCATTGTTG+TGG 0.586576 8_4:-47743462 Msa1329260:CDS
TTTCTGCAGGCTCCCCTGAG+AGG 0.587069 8_4:-47748689 Msa1329260:CDS
GAGATGAGATGGAGTGGTGT+TGG 0.588504 8_4:-47743848 Msa1329260:CDS
AGTTCAGACATCATTTGTCA+AGG 0.588754 8_4:-47747001 Msa1329260:CDS
ATTCAAGGTCCTGTTTATGT+CGG 0.589251 8_4:-47745950 Msa1329260:CDS
TGTCATCACCCATAGCTGGT+GGG 0.592019 8_4:-47748659 Msa1329260:CDS
CAAGGTACAATACATGAGAA+GGG 0.592601 8_4:+47744601 None:intergenic
TACTCCAGAAACTCTTCTGA+AGG 0.597459 8_4:-47745337 Msa1329260:CDS
CACATTCCTAGGCTGACAAG+TGG 0.602038 8_4:-47748816 Msa1329260:CDS
TTTCAGAGCGCATGTTGGGG+TGG 0.602719 8_4:-47748905 Msa1329260:CDS
AGTGTAAAACCCGATACAAG+AGG 0.603180 8_4:-47749813 Msa1329260:CDS
AACGCTTCTCATAATAAACC+TGG 0.604998 8_4:-47743624 Msa1329260:CDS
CCAAGCTGCTTCTGAAAGAG+GGG 0.606107 8_4:-47748370 Msa1329260:CDS
GAAGGGTGGGTAATGCAAGA+TGG 0.608459 8_4:-47746777 Msa1329260:CDS
GAGAAGACAGACAGCTGGCA+AGG 0.609401 8_4:+47744583 None:intergenic
TAGGCTGACAAGTGGACAAG+AGG 0.611529 8_4:-47748808 Msa1329260:intron
GGTCCTAAAGCTGAGGAGTG+TGG 0.611715 8_4:-47743365 Msa1329260:CDS
ATAAATCTGAGAGGTTTGGA+TGG 0.612754 8_4:-47745974 Msa1329260:CDS
AGTAAGAATATCTTCTGTGA+CGG 0.613338 8_4:+47744868 None:intergenic
CACCACTCCATCTCATCTCG+AGG 0.614025 8_4:+47743852 None:intergenic
GTTTCTGGAGTAGCATTCTG+AGG 0.615895 8_4:+47745348 None:intergenic
AAGTACCACTCGGGTGCACG+GGG 0.616533 8_4:+47747054 None:intergenic
AGTTATTGGAGATAGTGAAG+AGG 0.617238 8_4:-47748997 Msa1329260:CDS
GCCGTCATCAGAGACATAGC+AGG 0.618829 8_4:+47747164 None:intergenic
GACCAGACCACAACAATGGT+CGG 0.619461 8_4:+47743455 None:intergenic
CTATATACTGCATGCCTAAG+CGG 0.619588 8_4:-47744814 Msa1329260:CDS
ATGACATTGAGAGCCTCTCA+GGG 0.620772 8_4:+47748676 None:intergenic
GCCATAATGCATATGCATTG+CGG 0.621432 8_4:+47747525 None:intergenic
TCTAAACCAAGTGCTTCGAT+GGG 0.623315 8_4:-47744750 Msa1329260:CDS
ACGGTATTGGCAGTCACGAG+TGG 0.624594 8_4:+47747228 None:intergenic
TACCAGCAACAACTCCAACC+AGG 0.625003 8_4:+47743606 None:intergenic
CAGTTTATTGTAGATACATG+AGG 0.627018 8_4:-47743236 Msa1329260:three_prime_UTR
TATGCAGGAATGATGAAGCT+CGG 0.628129 8_4:-47747667 Msa1329260:intron
ATCCTCGAGATGAGATGGAG+TGG 0.628806 8_4:-47743854 Msa1329260:CDS
TCCACCATAACCATACCAGA+TGG 0.630645 8_4:+47744688 None:intergenic
TTCTGTGCGAAGTACCACTC+GGG 0.631108 8_4:+47747045 None:intergenic
AGATTTCAGAGCGCATGTTG+GGG 0.633187 8_4:-47748908 Msa1329260:CDS
AGTATATAGACCGCCAACCA+CGG 0.633767 8_4:+47744828 None:intergenic
ATATCCTCCAGACTGAAGAT+CGG 0.634513 8_4:+47745749 None:intergenic
TATTAATGGACTTGTTGCGA+AGG 0.636284 8_4:-47746817 Msa1329260:CDS
AGGCTCCTTTAACGGGTCAA+CGG 0.636718 8_4:+47747251 None:intergenic
CGAGAAACATAGACTAAACG+GGG 0.637457 8_4:+47746496 None:intergenic
GAAAGTTCCGGAAGAAGGGT+GGG 0.637739 8_4:-47746790 Msa1329260:CDS
GGGTTTCTGTCATCACTCTG+TGG 0.638042 8_4:-47745854 Msa1329260:CDS
GGATTCAAGATGCACGCCCG+TGG 0.639029 8_4:-47744845 Msa1329260:CDS
GATACGAGATTGATTAACAT+CGG 0.639919 8_4:+47748605 None:intergenic
TTGTATAGATATGATCGGGA+AGG 0.641237 8_4:-47747315 Msa1329260:intron
ATATCTTATGCTATCAACAG+TGG 0.641303 8_4:-47743584 Msa1329260:CDS
TTTGAACATGTAGAGTTCTG+CGG 0.641849 8_4:+47743673 None:intergenic
TCCAGAAACTCTTCTGAAGG+AGG 0.642092 8_4:-47745334 Msa1329260:CDS
CCACCATAACCATACCAGAT+GGG 0.642868 8_4:+47744689 None:intergenic
AGTGGAGGACTTGACACTGA+TGG 0.642928 8_4:-47746529 Msa1329260:CDS
GATAATGCAAGAAAATGCAA+AGG 0.648295 8_4:+47747564 None:intergenic
CTTGAACAGATAAATCTGAG+AGG 0.648912 8_4:-47745983 Msa1329260:intron
GGCAGTGACTGGATAAATTG+TGG 0.651190 8_4:+47744628 None:intergenic
TCCAAAGCATCAGATGAAGA+CGG 0.652886 8_4:-47743701 Msa1329260:CDS
TGGATGTGTCTTCAATAGGA+CGG 0.653041 8_4:-47745924 Msa1329260:CDS
AAGGTACAATACATGAGAAG+GGG 0.654133 8_4:+47744602 None:intergenic
GCTATGTCCAGTTTCCACAG+AGG 0.654920 8_4:-47746196 Msa1329260:CDS
TCAATACCATCAAACCTCTG+TGG 0.656019 8_4:+47746182 None:intergenic
CAACCTGGATCATTCCCGGA+TGG 0.656222 8_4:+47746724 None:intergenic
AATAACGTCAGAGACCATCC+GGG 0.657356 8_4:-47746738 Msa1329260:CDS
TGTGCCGATCTTCAGTCTGG+AGG 0.657513 8_4:-47745753 Msa1329260:CDS
CAACAGCAAGGCTTTGAGGG+AGG 0.657640 8_4:-47746261 Msa1329260:CDS
GTATTGGCAGTCACGAGTGG+AGG 0.661187 8_4:+47747231 None:intergenic
AGTCACTGGTCCTAAAGCTG+AGG 0.663832 8_4:-47743372 Msa1329260:CDS
TAAATCAGAATGGGGAACAG+AGG 0.664013 8_4:-47745280 Msa1329260:intron
GTGTTGGAATCGACGAGTGG+TGG 0.665956 8_4:-47743832 Msa1329260:CDS
AACAGTGGTTACCAATCATG+GGG 0.667481 8_4:-47743569 Msa1329260:CDS
TATGAGGATAAATCAGAATG+GGG 0.668700 8_4:-47745288 Msa1329260:CDS
CATACCAGATGGGACAATGT+CGG 0.669248 8_4:+47744699 None:intergenic
GTTATGGTGGAAGACTAAAG+TGG 0.673745 8_4:-47744676 Msa1329260:CDS
TTTATGATGGATCCCAACCT+CGG 0.675191 8_4:-47746230 Msa1329260:CDS
AATCGACCAGACCACAACAA+TGG 0.676823 8_4:+47743451 None:intergenic
AGGAGAACCGTCTCAACTAG+CGG 0.681127 8_4:-47747295 Msa1329260:CDS
TCACTACATAAACAACAGCA+AGG 0.690154 8_4:-47746273 Msa1329260:CDS
CATAGCAAACATGTTTACCG+AGG 0.695286 8_4:+47746213 None:intergenic
TTGAACCCCGTGCACCCGAG+TGG 0.700337 8_4:-47747059 Msa1329260:CDS
GTGGTGTTGGAATCGACGAG+TGG 0.702569 8_4:-47743835 Msa1329260:CDS
AGCTTCAAATGTCAACATAG+CGG 0.706066 8_4:+47747140 None:intergenic
TCAAGCATGCAAGATTTGCG+GGG 0.713098 8_4:-47749953 Msa1329260:CDS
TGACATTGAGAGCCTCTCAG+GGG 0.755358 8_4:+47748677 None:intergenic
TCTACGTTGATGGAGAATGG+TGG 0.764306 8_4:-47745375 Msa1329260:CDS
TAATGCAAGATGGTACACCG+TGG 0.810360 8_4:-47746767 Msa1329260:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTCATATTTTATAAAAACAA+AGG - chr8_4:47743715-47743734 Msa1329260:CDS 10.0%
!!! AAATTTTAATTGAAAGATTT+TGG + chr8_4:47745376-47745395 None:intergenic 10.0%
!!! AAATACTTGTTAAAAAAATA+TGG + chr8_4:47747431-47747450 None:intergenic 10.0%
!!! TCATTTTCTTAAATTATTAT+TGG - chr8_4:47747929-47747948 Msa1329260:intron 10.0%
!!! TTTTTGAAGAAAATATTTTA+TGG - chr8_4:47748728-47748747 Msa1329260:intron 10.0%
!! TTACAAAGAATTGAATAATA+AGG + chr8_4:47743673-47743692 None:intergenic 15.0%
!! TATTTATTGAACCTAAAAAA+TGG - chr8_4:47745283-47745302 Msa1329260:CDS 15.0%
!!! GAATTTAAAATTCGTATTAA+TGG - chr8_4:47746257-47746276 Msa1329260:CDS 15.0%
!! AAATTAGAAATTTACACAAT+TGG + chr8_4:47746450-47746469 None:intergenic 15.0%
!!! AAATACCTAAATCATATTTT+AGG + chr8_4:47747576-47747595 None:intergenic 15.0%
!!! ATTGTTATGTATATTTTTTC+AGG - chr8_4:47747605-47747624 Msa1329260:CDS 15.0%
!!! AAATTATATTTTATGTAGCT+TGG - chr8_4:47747850-47747869 Msa1329260:intron 15.0%
!!! TTGGTTATGAAAATATTTTT+GGG + chr8_4:47748757-47748776 None:intergenic 15.0%
!! AAGGTAAACAAAACATAAAT+TGG - chr8_4:47743302-47743321 Msa1329260:three_prime_UTR 20.0%
!! TAATAGTTATGATTGATTGA+TGG - chr8_4:47743454-47743473 Msa1329260:CDS 20.0%
!! TAACCATTCTTCATTTATAT+GGG - chr8_4:47743555-47743574 Msa1329260:CDS 20.0%
!! AATATGGTTCAATATTAATC+TGG - chr8_4:47743601-47743620 Msa1329260:CDS 20.0%
!! TCTTGAATTCAATTATGATT+TGG - chr8_4:47744136-47744155 Msa1329260:intron 20.0%
!!! TTTTTGCTTATAATAGTGAT+GGG + chr8_4:47745204-47745223 None:intergenic 20.0%
!! CAATAAATAACTGATGTATT+TGG + chr8_4:47745272-47745291 None:intergenic 20.0%
!!! TAAGCAAAAAACCATTTTTT+AGG + chr8_4:47745297-47745316 None:intergenic 20.0%
!! AAATTGTGATGAAGTTTAAA+AGG + chr8_4:47745704-47745723 None:intergenic 20.0%
!!! TGTAAATTTCTAATTTGTAC+CGG - chr8_4:47746454-47746473 Msa1329260:CDS 20.0%
!!! TTTTTATGTTTCACTTTAAG+AGG + chr8_4:47747210-47747229 None:intergenic 20.0%
!! TTGTATCTCATGTTAAAATT+GGG - chr8_4:47747523-47747542 Msa1329260:CDS 20.0%
!!! GTTTTCCTAAAATATGATTT+AGG - chr8_4:47747568-47747587 Msa1329260:CDS 20.0%
!! TGAATAAAAATAAAACCCAA+AGG - chr8_4:47747964-47747983 Msa1329260:intron 20.0%
!!! AAACTAACAATGTTTTCAAA+TGG - chr8_4:47748149-47748168 Msa1329260:intron 20.0%
!! ATGTTGAATTTATCCTAAAA+TGG - chr8_4:47748652-47748671 Msa1329260:CDS 20.0%
!!! GTTGGTTATGAAAATATTTT+TGG + chr8_4:47748758-47748777 None:intergenic 20.0%
!! TGAATTAATTTAGAAGTGAT+TGG + chr8_4:47748862-47748881 None:intergenic 20.0%
!! AATCACTTCTAAATTAATTC+AGG - chr8_4:47748861-47748880 Msa1329260:CDS 20.0%
!!! TAAACTTTTCTTTGCATTTT+GGG - chr8_4:47749554-47749573 Msa1329260:intron 20.0%
!!! AAGCATATGCTTTTTTATTT+CGG + chr8_4:47749763-47749782 None:intergenic 20.0%
!!! AAATAAAAAAGCATATGCTT+TGG - chr8_4:47749763-47749782 Msa1329260:intron 20.0%
!! GGATTGTAATTATATAATTG+TGG - chr8_4:47749792-47749811 Msa1329260:intron 20.0%
!! TGTAATTATATAATTGTGGT+AGG - chr8_4:47749796-47749815 Msa1329260:intron 20.0%
!! ATATGACAGATAATACGTTT+TGG + chr8_4:47743519-47743538 None:intergenic 25.0%
! CTAACCATTCTTCATTTATA+TGG - chr8_4:47743554-47743573 Msa1329260:CDS 25.0%
! AACCATTCTTCATTTATATG+GGG - chr8_4:47743556-47743575 Msa1329260:CDS 25.0%
!!! AGTATATCCTTTTAGCTTAA+AGG - chr8_4:47743815-47743834 Msa1329260:CDS 25.0%
! TAAATAGCCTTTAAGCTAAA+AGG + chr8_4:47743825-47743844 None:intergenic 25.0%
! ATAAGTGAACTAATTACCAA+CGG + chr8_4:47744052-47744071 None:intergenic 25.0%
!! TTAGTTCACTTATTGATTAC+AGG - chr8_4:47744059-47744078 Msa1329260:intron 25.0%
! GAAACTTCCTTATCATAATT+TGG + chr8_4:47744245-47744264 None:intergenic 25.0%
! ATAAATGACAGAGATAGTAA+AGG + chr8_4:47744800-47744819 None:intergenic 25.0%
! GACACATATAATTTGAAAAG+GGG + chr8_4:47744829-47744848 None:intergenic 25.0%
! GGACACATATAATTTGAAAA+GGG + chr8_4:47744830-47744849 None:intergenic 25.0%
! TGGACACATATAATTTGAAA+AGG + chr8_4:47744831-47744850 None:intergenic 25.0%
! CACATCATCTATATATGAAA+TGG + chr8_4:47744851-47744870 None:intergenic 25.0%
! ATAGTAGATACTGATAACTT+GGG + chr8_4:47744892-47744911 None:intergenic 25.0%
!! ACTATGTAGTAATTTGAAGT+AGG - chr8_4:47744907-47744926 Msa1329260:intron 25.0%
!! CTTTTTGCTTATAATAGTGA+TGG + chr8_4:47745205-47745224 None:intergenic 25.0%
! ATTATAAGCAAAAAGTCACT+TGG - chr8_4:47745210-47745229 Msa1329260:intron 25.0%
! TTATAAGCAAAAAGTCACTT+GGG - chr8_4:47745211-47745230 Msa1329260:intron 25.0%
!! TTTGCATTTTCTTGCATTAT+CGG - chr8_4:47745526-47745545 Msa1329260:intron 25.0%
! AACTGAAAGAATAGAAAGTA+CGG + chr8_4:47745882-47745901 None:intergenic 25.0%
! ATATTATACTTCTTGGTGAA+AGG + chr8_4:47746010-47746029 None:intergenic 25.0%
!! TATTCTCTCTGAAAAGTAAA+CGG + chr8_4:47746233-47746252 None:intergenic 25.0%
! ATGTAACATTAGTAAATGAC+AGG + chr8_4:47746508-47746527 None:intergenic 25.0%
!! TTTTCATTCAATAGACAACA+TGG - chr8_4:47746680-47746699 Msa1329260:intron 25.0%
! CAATCAAGATTCAATAAGAA+AGG + chr8_4:47746792-47746811 None:intergenic 25.0%
! AAAGAAAACAGTATTACGAT+TGG + chr8_4:47746949-47746968 None:intergenic 25.0%
! GAAAATGACAACGTTAAATA+TGG + chr8_4:47747457-47747476 None:intergenic 25.0%
! GTTGTATCTCATGTTAAAAT+TGG - chr8_4:47747522-47747541 Msa1329260:CDS 25.0%
!!! ATGTATATTTTTTCAGGTTC+TGG - chr8_4:47747611-47747630 Msa1329260:CDS 25.0%
! GATGATTATGAGAAAAGATT+CGG - chr8_4:47747668-47747687 Msa1329260:intron 25.0%
! TTATGAGGATAAATCAGAAT+GGG - chr8_4:47747799-47747818 Msa1329260:intron 25.0%
! ATAAAAATAAAACCCAAAGG+AGG - chr8_4:47747967-47747986 Msa1329260:intron 25.0%
!!! TTGTTTTATGTTCAACAGAT+AGG - chr8_4:47748183-47748202 Msa1329260:intron 25.0%
! GAATTTATCCTAAAATGGAA+AGG - chr8_4:47748657-47748676 Msa1329260:CDS 25.0%
! TCTGCAAGCAAAATAAAATT+AGG + chr8_4:47749155-47749174 None:intergenic 25.0%
!! GTAAACTTTTCTTTGCATTT+TGG - chr8_4:47749553-47749572 Msa1329260:intron 25.0%
!! GTCTATTTTCTCTCTATTAT+GGG - chr8_4:47749668-47749687 Msa1329260:intron 25.0%
!!! TTATTTTACGTACACCATTA+GGG - chr8_4:47749954-47749973 Msa1329260:CDS 25.0%
! ATTTAGTTGTTTATCCTAAC+AGG + chr8_4:47749981-47750000 None:intergenic 25.0%
! GTTAGGATAAACAACTAAAT+TGG - chr8_4:47749981-47750000 Msa1329260:exon 25.0%
TATGAGTATGAAAGGAAAGA+TGG - chr8_4:47743235-47743254 Msa1329260:three_prime_UTR 30.0%
ATGAGTATGAAAGGAAAGAT+GGG - chr8_4:47743236-47743255 Msa1329260:three_prime_UTR 30.0%
! ACTGTGTAGAACTTTTTACA+CGG + chr8_4:47743362-47743381 None:intergenic 30.0%
TGGTGTAAAAATCTTTACAG+CGG - chr8_4:47743474-47743493 Msa1329260:CDS 30.0%
TTCCCCATATAAATGAAGAA+TGG + chr8_4:47743561-47743580 None:intergenic 30.0%
! TGGTGTTAAAAACATGTTGA+AGG - chr8_4:47743621-47743640 Msa1329260:CDS 30.0%
ATGAAGTTGTTATGTGAAAG+AGG - chr8_4:47743644-47743663 Msa1329260:CDS 30.0%
! AGATAGAATATCCTTTTCAG+TGG + chr8_4:47743857-47743876 None:intergenic 30.0%
!! ATGAAGGAGTGTTCTTTATT+AGG - chr8_4:47743947-47743966 Msa1329260:intron 30.0%
TGTTGTTACTAATCACTAGA+TGG - chr8_4:47743988-47744007 Msa1329260:intron 30.0%
!!! AAATCTTCTGCTTTTGGTTT+TGG + chr8_4:47744166-47744185 None:intergenic 30.0%
! TTTGGCATGTTTTCAATTTC+AGG - chr8_4:47744364-47744383 Msa1329260:intron 30.0%
GATACGAGATTGATTAACAT+CGG + chr8_4:47744486-47744505 None:intergenic 30.0%
AAAATGAGCATAGTAAGAAG+GGG + chr8_4:47744515-47744534 None:intergenic 30.0%
GAAAATGAGCATAGTAAGAA+GGG + chr8_4:47744516-47744535 None:intergenic 30.0%
TGAAAATGAGCATAGTAAGA+AGG + chr8_4:47744517-47744536 None:intergenic 30.0%
! TGATTGTGATTTGAGATGTT+TGG - chr8_4:47744573-47744592 Msa1329260:CDS 30.0%
ATCATCAAATACATCAGATC+TGG + chr8_4:47744759-47744778 None:intergenic 30.0%
CATAGTAGATACTGATAACT+TGG + chr8_4:47744893-47744912 None:intergenic 30.0%
! TTTTTCGCTAGAAACTATGA+TGG - chr8_4:47744992-47745011 Msa1329260:intron 30.0%
TATTCATGACTCATTCTAAG+AGG - chr8_4:47745149-47745168 Msa1329260:intron 30.0%
! ATTCATGACTCATTCTAAGA+GGG - chr8_4:47745150-47745169 Msa1329260:intron 30.0%
TATGGATTTATCCTAGATGA+TGG + chr8_4:47745474-47745493 None:intergenic 30.0%
TAGGATAAATCCATATCGAT+TGG - chr8_4:47745479-47745498 Msa1329260:intron 30.0%
GATAATGCAAGAAAATGCAA+AGG + chr8_4:47745527-47745546 None:intergenic 30.0%
GTGTCTTGTATAGATATGAT+CGG - chr8_4:47745768-47745787 Msa1329260:CDS 30.0%
TGTCTTGTATAGATATGATC+GGG - chr8_4:47745769-47745788 Msa1329260:CDS 30.0%
! AAGAATAGAAAGTACGGTAT+TGG + chr8_4:47745876-47745895 None:intergenic 30.0%
GGGTTCAATATTATACTTCT+TGG + chr8_4:47746017-47746036 None:intergenic 30.0%
ACAGAAGATTGATTACTTGA+AGG - chr8_4:47746060-47746079 Msa1329260:intron 30.0%
GTACAAATATATTATTCCGC+TGG - chr8_4:47746140-47746159 Msa1329260:CDS 30.0%
! ATTCTCTCTGAAAAGTAAAC+GGG + chr8_4:47746232-47746251 None:intergenic 30.0%
TTACATTTGATATCTTCTGC+AGG - chr8_4:47746522-47746541 Msa1329260:CDS 30.0%
TCAATAGACAACATGGAATT+CGG - chr8_4:47746687-47746706 Msa1329260:intron 30.0%
ATAAGAAAGGTCCATTAGTA+AGG + chr8_4:47746779-47746798 None:intergenic 30.0%
TGAAAACAAGTTCTCAGAAA+GGG + chr8_4:47747070-47747089 None:intergenic 30.0%
ATGAAAACAAGTTCTCAGAA+AGG + chr8_4:47747071-47747090 None:intergenic 30.0%
! TTATGTTTCACTTTAAGAGG+AGG + chr8_4:47747207-47747226 None:intergenic 30.0%
AAAGTGAAACATAAAAAGCC+TGG - chr8_4:47747213-47747232 Msa1329260:CDS 30.0%
AAGTGAAACATAAAAAGCCT+GGG - chr8_4:47747214-47747233 Msa1329260:CDS 30.0%
AGTTCAAAATCTAGCAAGAA+AGG - chr8_4:47747273-47747292 Msa1329260:CDS 30.0%
GGCAAAAATAGTTTGAACTA+TGG + chr8_4:47747410-47747429 None:intergenic 30.0%
AGTCAACAAAAACAGATGAT+TGG + chr8_4:47747694-47747713 None:intergenic 30.0%
GTTATGAGGATAAATCAGAA+TGG - chr8_4:47747798-47747817 Msa1329260:intron 30.0%
TATGAGGATAAATCAGAATG+GGG - chr8_4:47747800-47747819 Msa1329260:intron 30.0%
TTCAGATCAAAAGTTTGTCT+GGG - chr8_4:47747876-47747895 Msa1329260:intron 30.0%
TTTATGTTCAACAGATAGGA+TGG - chr8_4:47748187-47748206 Msa1329260:intron 30.0%
AGTAAGAATATCTTCTGTGA+CGG + chr8_4:47748223-47748242 None:intergenic 30.0%
GAAAGAAAAAACAAACCTGA+GGG + chr8_4:47748548-47748567 None:intergenic 30.0%
AGAAAGAAAAAACAAACCTG+AGG + chr8_4:47748549-47748568 None:intergenic 30.0%
TTAATCACTTGTTTAGTTGC+TGG + chr8_4:47748585-47748604 None:intergenic 30.0%
AGCAACTAAACAAGTGATTA+AGG - chr8_4:47748584-47748603 Msa1329260:intron 30.0%
! ACTTAATGCCTTTCCATTTT+AGG + chr8_4:47748668-47748687 None:intergenic 30.0%
!! AAAATGGAAAGGCATTAAGT+AGG - chr8_4:47748668-47748687 Msa1329260:CDS 30.0%
! GAACTGAAACTGTCTTTTTA+TGG - chr8_4:47748788-47748807 Msa1329260:intron 30.0%
! AAACTGTCTTTTTATGGACT+CGG - chr8_4:47748794-47748813 Msa1329260:intron 30.0%
AAATACATTCCGAATATGAG+CGG - chr8_4:47749030-47749049 Msa1329260:intron 30.0%
TTAGCAACTTAGCTAGTATA+TGG - chr8_4:47749175-47749194 Msa1329260:intron 30.0%
!!! AATGAACAGTTTTGGGTTAT+CGG - chr8_4:47749282-47749301 Msa1329260:intron 30.0%
! TTTTAGTAGACCTTGAAACA+CGG + chr8_4:47749331-47749350 None:intergenic 30.0%
!! TTTATTATGAGAAGCGTTGT+TGG + chr8_4:47749462-47749481 None:intergenic 30.0%
ATATCTTATGCTATCAACAG+TGG - chr8_4:47749504-47749523 Msa1329260:intron 30.0%
AAGAAAAGTTTACCAAAGAG+TGG + chr8_4:47749546-47749565 None:intergenic 30.0%
! CGTCTATTTTCTCTCTATTA+TGG - chr8_4:47749667-47749686 Msa1329260:intron 30.0%
CAGTTTATTGTAGATACATG+AGG - chr8_4:47749852-47749871 Msa1329260:CDS 30.0%
!! GTTATTTTACGTACACCATT+AGG - chr8_4:47749953-47749972 Msa1329260:CDS 30.0%
AAGATTTGCGGGGAAAATAT+TGG - chr8_4:47743145-47743164 Msa1329260:three_prime_UTR 35.0%
AGATTTGCGGGGAAAATATT+GGG - chr8_4:47743146-47743165 Msa1329260:three_prime_UTR 35.0%
TACCTTTATGCCTCTTGTAT+CGG + chr8_4:47743288-47743307 None:intergenic 35.0%
! CTTTTTACACGGACAAACTA+AGG + chr8_4:47743351-47743370 None:intergenic 35.0%
CAAAAGACTACGGCAAAATA+TGG - chr8_4:47743585-47743604 Msa1329260:CDS 35.0%
TTGAAAATTATGACCTTGCC+TGG - chr8_4:47743753-47743772 Msa1329260:CDS 35.0%
TACTCAATGAACCACTGAAA+AGG - chr8_4:47743843-47743862 Msa1329260:CDS 35.0%
CTCAACGAATGAACAAATGA+AGG - chr8_4:47743931-47743950 Msa1329260:intron 35.0%
TACTCATGTGATATTTCCGT+TGG - chr8_4:47744033-47744052 Msa1329260:intron 35.0%
AGTTATTGGAGATAGTGAAG+AGG - chr8_4:47744091-47744110 Msa1329260:intron 35.0%
TTTCTCACAATCACATTCCT+AGG - chr8_4:47744261-47744280 Msa1329260:intron 35.0%
! AGGAGAAAGACTGTCATTTA+GGG + chr8_4:47744320-47744339 None:intergenic 35.0%
! AAGGAGAAAGACTGTCATTT+AGG + chr8_4:47744321-47744340 None:intergenic 35.0%
ACATGCCAAATTTCATTCAG+AGG + chr8_4:47744354-47744373 None:intergenic 35.0%
!! TGTTTTCAATTTCAGGTGTC+TGG - chr8_4:47744371-47744390 Msa1329260:intron 35.0%
TGATTAACATCGGACGAATA+TGG + chr8_4:47744476-47744495 None:intergenic 35.0%
AGGATTGTTGACGCAAAATT+GGG - chr8_4:47744620-47744639 Msa1329260:CDS 35.0%
TTGAAGTAGGACTTGTATCT+AGG - chr8_4:47744920-47744939 Msa1329260:intron 35.0%
TGAAGTAGGACTTGTATCTA+GGG - chr8_4:47744921-47744940 Msa1329260:intron 35.0%
CCTAAATCTAAGCACTCTTT+CGG + chr8_4:47744958-47744977 None:intergenic 35.0%
!! CGAAAGAGTGCTTAGATTTA+GGG - chr8_4:47744956-47744975 Msa1329260:intron 35.0%
CTATGATGGTCTATCACTAT+TGG - chr8_4:47745006-47745025 Msa1329260:intron 35.0%
! TGCTTATAATAGTGATGGGA+CGG + chr8_4:47745200-47745219 None:intergenic 35.0%
AGTTTCTACAAGACTACATC+TGG + chr8_4:47745329-47745348 None:intergenic 35.0%
CTGCATAACAAAGAAAACTG+AGG + chr8_4:47745408-47745427 None:intergenic 35.0%
!! CTCAGTTTTCTTTGTTATGC+AGG - chr8_4:47745406-47745425 Msa1329260:CDS 35.0%
AGGTTTCTATTCCATCATCT+AGG - chr8_4:47745460-47745479 Msa1329260:CDS 35.0%
AGAACAATGACCAATCGATA+TGG + chr8_4:47745492-47745511 None:intergenic 35.0%
! GCATTATCGGTTAACAAATC+CGG - chr8_4:47745539-47745558 Msa1329260:intron 35.0%
ATATGCATTATGGCTGGTAT+CGG - chr8_4:47745572-47745591 Msa1329260:intron 35.0%
! TATCGGTTATATGCGAGATT+TGG - chr8_4:47745589-47745608 Msa1329260:intron 35.0%
TTGTATAGATATGATCGGGA+AGG - chr8_4:47745773-47745792 Msa1329260:CDS 35.0%
AGCTTCAAATGTCAACATAG+CGG + chr8_4:47745951-47745970 None:intergenic 35.0%
ATCAGAGTTTGCGAGAAAAT+GGG - chr8_4:47745982-47746001 Msa1329260:intron 35.0%
AGTTCAGACATCATTTGTCA+AGG - chr8_4:47746087-47746106 Msa1329260:intron 35.0%
! TATGCTACTTGCACAAGTAT+TGG - chr8_4:47746176-47746195 Msa1329260:CDS 35.0%
!! TATTAATGGACTTGTTGCGA+AGG - chr8_4:47746271-47746290 Msa1329260:CDS 35.0%
ATTTACACAATTGGTCCGAA+AGG + chr8_4:47746441-47746460 None:intergenic 35.0%
! TATCTTCTGCAGGTTTTCTT+AGG - chr8_4:47746532-47746551 Msa1329260:CDS 35.0%
ACGAGAAACATAGACTAAAC+GGG + chr8_4:47746596-47746615 None:intergenic 35.0%
CACGAGAAACATAGACTAAA+CGG + chr8_4:47746597-47746616 None:intergenic 35.0%
! GTGGTTAATCTAATTTGTGC+AGG - chr8_4:47746737-47746756 Msa1329260:CDS 35.0%
TCACTACATAAACAACAGCA+AGG - chr8_4:47746815-47746834 Msa1329260:CDS 35.0%
!! AGAGGTTTGATGGTATTGAT+AGG - chr8_4:47746910-47746929 Msa1329260:intron 35.0%
AAAACAAGTTCTCAGAAAGG+GGG + chr8_4:47747068-47747087 None:intergenic 35.0%
GAAAACAAGTTCTCAGAAAG+GGG + chr8_4:47747069-47747088 None:intergenic 35.0%
CTTGAACAGATAAATCTGAG+AGG - chr8_4:47747105-47747124 Msa1329260:CDS 35.0%
ACAGATAAATCTGAGAGGTT+TGG - chr8_4:47747110-47747129 Msa1329260:CDS 35.0%
ATAAATCTGAGAGGTTTGGA+TGG - chr8_4:47747114-47747133 Msa1329260:CDS 35.0%
ATTCAAGGTCCTGTTTATGT+CGG - chr8_4:47747138-47747157 Msa1329260:CDS 35.0%
! TTCAATAGGACGGCTTTATA+CGG - chr8_4:47747174-47747193 Msa1329260:CDS 35.0%
GATATTGAAGAAGGAGTAGA+AGG - chr8_4:47747357-47747376 Msa1329260:intron 35.0%
AACTATTATGCAACGAATGC+AGG + chr8_4:47747387-47747406 None:intergenic 35.0%
!!! TTTTGTTGACTCTACGTTGA+TGG - chr8_4:47747703-47747722 Msa1329260:intron 35.0%
CTTCAGATCAAAAGTTTGTC+TGG - chr8_4:47747875-47747894 Msa1329260:intron 35.0%
TCAGATCAAAAGTTTGTCTG+GGG - chr8_4:47747877-47747896 Msa1329260:intron 35.0%
ATGAAGCAATGTCAAAGACA+TGG + chr8_4:47748014-47748033 None:intergenic 35.0%
!! CAGTTGATAGCATTAGAATG+TGG + chr8_4:47748069-47748088 None:intergenic 35.0%
! CAACAGATAGGATGGATTTA+TGG - chr8_4:47748195-47748214 Msa1329260:intron 35.0%
GTCACAGAAGATATTCTTAC+TGG - chr8_4:47748222-47748241 Msa1329260:intron 35.0%
AGACGATCAGAAAGATTGAT+GGG + chr8_4:47748321-47748340 None:intergenic 35.0%
TAGACGATCAGAAAGATTGA+TGG + chr8_4:47748322-47748341 None:intergenic 35.0%
AAGGTACAATACATGAGAAG+GGG + chr8_4:47748489-47748508 None:intergenic 35.0%
CAAGGTACAATACATGAGAA+GGG + chr8_4:47748490-47748509 None:intergenic 35.0%
TTCAGTTCACAATGTCATGT+TGG + chr8_4:47748776-47748795 None:intergenic 35.0%
! AATCTAGAGTTTCTGACCTT+CGG - chr8_4:47748977-47748996 Msa1329260:CDS 35.0%
TTTCTTTCAATCTTCGCAAC+CGG - chr8_4:47749210-47749229 Msa1329260:intron 35.0%
! GTGGAGAAATGAACAGTTTT+GGG - chr8_4:47749275-47749294 Msa1329260:intron 35.0%
TTGAAACACGGCAAAAAGAT+GGG + chr8_4:47749319-47749338 None:intergenic 35.0%
TTTGAACATGTAGAGTTCTG+CGG + chr8_4:47749418-47749437 None:intergenic 35.0%
CAGAACTCTACATGTTCAAA+TGG - chr8_4:47749418-47749437 Msa1329260:intron 35.0%
AACGCTTCTCATAATAAACC+TGG - chr8_4:47749464-47749483 Msa1329260:intron 35.0%
CTTCTCATAATAAACCTGGT+TGG - chr8_4:47749468-47749487 Msa1329260:intron 35.0%
! CCATAAGACCTTTAAGGAAA+GGG + chr8_4:47749596-47749615 None:intergenic 35.0%
! CCTTTCCTTAAAGGTCTTAT+GGG - chr8_4:47749594-47749613 Msa1329260:intron 35.0%
!! AAAGCATATGCTTTGGTGTT+TGG - chr8_4:47749770-47749789 Msa1329260:intron 35.0%
!! AAGCATATGCTTTGGTGTTT+GGG - chr8_4:47749771-47749790 Msa1329260:intron 35.0%
GGAAAGCCAATGACAACATT+GGG - chr8_4:47743109-47743128 Msa1329260:three_prime_UTR 40.0%
TGATCACCCAATGTTGTCAT+TGG + chr8_4:47743118-47743137 None:intergenic 40.0%
GATCAAGCATGCAAGATTTG+CGG - chr8_4:47743133-47743152 Msa1329260:three_prime_UTR 40.0%
ATCAAGCATGCAAGATTTGC+GGG - chr8_4:47743134-47743153 Msa1329260:three_prime_UTR 40.0%
AATATTGGGAAGACGGTTGA+TGG - chr8_4:47743160-47743179 Msa1329260:three_prime_UTR 40.0%
CAAGCATCACATGCAATGAA+TGG + chr8_4:47743190-47743209 None:intergenic 40.0%
! CTTGTGCTTTTCCTGTTTGT+CGG - chr8_4:47743206-47743225 Msa1329260:three_prime_UTR 40.0%
! GGCTTTGCTATGAGTATGAA+AGG - chr8_4:47743227-47743246 Msa1329260:three_prime_UTR 40.0%
AGTGTAAAACCCGATACAAG+AGG - chr8_4:47743275-47743294 Msa1329260:three_prime_UTR 40.0%
ACCTTTATGCCTCTTGTATC+GGG + chr8_4:47743287-47743306 None:intergenic 40.0%
!! ATTGGTGTCAATTAGCTTCC+AGG + chr8_4:47743774-47743793 None:intergenic 40.0%
AAAGGATATACTCTCTCCTC+CGG + chr8_4:47743807-47743826 None:intergenic 40.0%
TCACTATCTCCAATAACTGC+AGG + chr8_4:47744089-47744108 None:intergenic 40.0%
TATTGGAGATAGTGAAGAGG+AGG - chr8_4:47744094-47744113 Msa1329260:intron 40.0%
!!! GCTCTGAAATCTTCTGCTTT+TGG + chr8_4:47744172-47744191 None:intergenic 40.0%
AAGATTTCAGAGCGCATGTT+GGG - chr8_4:47744179-47744198 Msa1329260:intron 40.0%
TGGCGCTCCAAATTATGATA+AGG - chr8_4:47744235-47744254 Msa1329260:intron 40.0%
CAGTCTTTCTCCTTCAACTA+CGG - chr8_4:47744327-47744346 Msa1329260:intron 40.0%
AGTCTTTCTCCTTCAACTAC+GGG - chr8_4:47744328-47744347 Msa1329260:intron 40.0%
ATTCTTGTGCAGCAAATACC+AGG - chr8_4:47744600-47744619 Msa1329260:CDS 40.0%
! CAATTTTGCGTCAACAATCC+TGG + chr8_4:47744621-47744640 None:intergenic 40.0%
CAGGATTGTTGACGCAAAAT+TGG - chr8_4:47744619-47744638 Msa1329260:CDS 40.0%
CAAAATTGGGCAATGTAGCA+TGG - chr8_4:47744633-47744652 Msa1329260:CDS 40.0%
! ATTGGAGCAGCATTCTTTTC+TGG + chr8_4:47744689-47744708 None:intergenic 40.0%
!! CCGAAAGAGTGCTTAGATTT+AGG - chr8_4:47744955-47744974 Msa1329260:intron 40.0%
GCATCAAGTGCCTATTTCAA+CGG - chr8_4:47745058-47745077 Msa1329260:intron 40.0%
! TGACTCATTCTAAGAGGGTT+TGG - chr8_4:47745155-47745174 Msa1329260:intron 40.0%
CAGTGAAGAACTGATGTATC+TGG - chr8_4:47745236-47745255 Msa1329260:intron 40.0%
TATGCAGGAATGATGAAGCT+CGG - chr8_4:47745421-47745440 Msa1329260:CDS 40.0%
ATAGAAACCTTCCTGGAAAG+AGG + chr8_4:47745450-47745469 None:intergenic 40.0%
TGATGGAATAGAAACCTTCC+TGG + chr8_4:47745457-47745476 None:intergenic 40.0%
TCCGCAATGCATATGCATTA+TGG - chr8_4:47745562-47745581 Msa1329260:intron 40.0%
GCCATAATGCATATGCATTG+CGG + chr8_4:47745566-47745585 None:intergenic 40.0%
CAATGCATATGCATTATGGC+TGG - chr8_4:47745566-47745585 Msa1329260:intron 40.0%
!! AGATTTGGTTTGCCATATCC+TGG - chr8_4:47745604-47745623 Msa1329260:intron 40.0%
GTTTGCCATATCCTGGATAT+TGG - chr8_4:47745611-47745630 Msa1329260:intron 40.0%
CTGATCCAATATCCAGGATA+TGG + chr8_4:47745619-47745638 None:intergenic 40.0%
TATTGGATCAGTTCCCTAAG+TGG - chr8_4:47745628-47745647 Msa1329260:intron 40.0%
GTCTATCGAGATATGTTTCG+CGG + chr8_4:47745665-47745684 None:intergenic 40.0%
ATCTCGATAGACTTGCACTA+AGG - chr8_4:47745673-47745692 Msa1329260:intron 40.0%
TCTTTCAGTTGACTATCCAG+TGG - chr8_4:47745892-47745911 Msa1329260:CDS 40.0%
AGTTGACTATCCAGTGGATA+AGG - chr8_4:47745898-47745917 Msa1329260:CDS 40.0%
CATCAGAGTTTGCGAGAAAA+TGG - chr8_4:47745981-47746000 Msa1329260:intron 40.0%
AAATAACGTCAGAGACCATC+CGG - chr8_4:47746349-47746368 Msa1329260:intron 40.0%
TCAAAAGAACTCAACCAACC+TGG + chr8_4:47746382-47746401 None:intergenic 40.0%
ACATGTTACCCTTGACCTTT+CGG - chr8_4:47746423-47746442 Msa1329260:intron 40.0%
CTGTTTACTCATACGCAATC+CGG + chr8_4:47746476-47746495 None:intergenic 40.0%
CGAGAAACATAGACTAAACG+GGG + chr8_4:47746595-47746614 None:intergenic 40.0%
TTCTTGTGATGTTGGAAACC+TGG + chr8_4:47746628-47746647 None:intergenic 40.0%
TTCCAACATCACAAGAAAGC+TGG - chr8_4:47746631-47746650 Msa1329260:intron 40.0%
GATACTCACAAGTGCATTCA+TGG + chr8_4:47746659-47746678 None:intergenic 40.0%
ACAACATGGAATTCGGTATC+TGG - chr8_4:47746694-47746713 Msa1329260:intron 40.0%
GTATCTGCTGTCCTTACTAA+TGG - chr8_4:47746765-47746784 Msa1329260:CDS 40.0%
TAAACAACAGCAAGGCTTTG+AGG - chr8_4:47746823-47746842 Msa1329260:CDS 40.0%
! AAACAACAGCAAGGCTTTGA+GGG - chr8_4:47746824-47746843 Msa1329260:CDS 40.0%
!! TTTATGATGGATCCCAACCT+CGG - chr8_4:47746858-47746877 Msa1329260:intron 40.0%
CAAACATGTTTACCGAGGTT+GGG + chr8_4:47746873-47746892 None:intergenic 40.0%
CATAGCAAACATGTTTACCG+AGG + chr8_4:47746878-47746897 None:intergenic 40.0%
TCAATACCATCAAACCTCTG+TGG + chr8_4:47746909-47746928 None:intergenic 40.0%
CTCAGAAAGGGGGAAAAAAA+TGG + chr8_4:47747058-47747077 None:intergenic 40.0%
GTACTGGATGTGTCTTCAAT+AGG - chr8_4:47747160-47747179 Msa1329260:CDS 40.0%
TGGATGTGTCTTCAATAGGA+CGG - chr8_4:47747164-47747183 Msa1329260:CDS 40.0%
ATATCCTCCAGACTGAAGAT+CGG + chr8_4:47747342-47747361 None:intergenic 40.0%
AGTCTGGAGGATATTGAAGA+AGG - chr8_4:47747348-47747367 Msa1329260:intron 40.0%
TTGAAGAAGGAGTAGAAGGT+AGG - chr8_4:47747361-47747380 Msa1329260:intron 40.0%
! AGCTTGCTTTCTTGCTTCTT+TGG - chr8_4:47747496-47747515 Msa1329260:CDS 40.0%
TACTCCAGAAACTCTTCTGA+AGG - chr8_4:47747751-47747770 Msa1329260:intron 40.0%
GCTATTCATGTTATCAGCTG+TGG - chr8_4:47747776-47747795 Msa1329260:intron 40.0%
TGTTATCAGCTGTGGTTATG+AGG - chr8_4:47747784-47747803 Msa1329260:intron 40.0%
TAAATCAGAATGGGGAACAG+AGG - chr8_4:47747808-47747827 Msa1329260:intron 40.0%
ACAAGACATGAACCTCCTTT+GGG + chr8_4:47747982-47748001 None:intergenic 40.0%
AACAAGACATGAACCTCCTT+TGG + chr8_4:47747983-47748002 None:intergenic 40.0%
CTATATACTGCATGCCTAAG+CGG - chr8_4:47748274-47748293 Msa1329260:intron 40.0%
TCTAAACCAAGTGCTTCGAT+GGG - chr8_4:47748338-47748357 Msa1329260:CDS 40.0%
! GTTATGGTGGAAGACTAAAG+TGG - chr8_4:47748412-47748431 Msa1329260:CDS 40.0%
GAAGACTAAAGTGGCTTGAA+AGG - chr8_4:47748421-47748440 Msa1329260:CDS 40.0%
ACAATACATGAGAAGGGGAA+TGG + chr8_4:47748484-47748503 None:intergenic 40.0%
GCAAGGTACAATACATGAGA+AGG + chr8_4:47748491-47748510 None:intergenic 40.0%
AACCACATTTGTTCGTGTCA+TGG + chr8_4:47748835-47748854 None:intergenic 40.0%
! CTTTTCTTTAGCAGCAGTCA+CGG + chr8_4:47748945-47748964 None:intergenic 40.0%
!! TCTGGTCTTATTCCATTGGT+CGG - chr8_4:47749053-47749072 Msa1329260:intron 40.0%
! GGTGGAGAAATGAACAGTTT+TGG - chr8_4:47749274-47749293 Msa1329260:intron 40.0%
CTTGAAACACGGCAAAAAGA+TGG + chr8_4:47749320-47749339 None:intergenic 40.0%
! CATCTTTTTGCCGTGTTTCA+AGG - chr8_4:47749318-47749337 Msa1329260:intron 40.0%
!! GGTCTACTAAAAGTACTTGC+CGG - chr8_4:47749339-47749358 Msa1329260:intron 40.0%
! TCCAAAGCATCAGATGAAGA+CGG - chr8_4:47749387-47749406 Msa1329260:intron 40.0%
!! ATTATGAGAAGCGTTGTTGG+AGG + chr8_4:47749459-47749478 None:intergenic 40.0%
TCAACAGTGGTTACCAATCA+TGG - chr8_4:47749517-47749536 Msa1329260:intron 40.0%
CAACAGTGGTTACCAATCAT+GGG - chr8_4:47749518-47749537 Msa1329260:intron 40.0%
AACAGTGGTTACCAATCATG+GGG - chr8_4:47749519-47749538 Msa1329260:intron 40.0%
CATCTCTACCCTTTCCTTAA+AGG - chr8_4:47749585-47749604 Msa1329260:intron 40.0%
CCCTTTCCTTAAAGGTCTTA+TGG - chr8_4:47749593-47749612 Msa1329260:intron 40.0%
! CCCATAAGACCTTTAAGGAA+AGG + chr8_4:47749597-47749616 None:intergenic 40.0%
CCAGTGACTCTTGTAGTAAA+CGG + chr8_4:47749705-47749724 None:intergenic 40.0%
TTATCCTAACAGGACCCTAA+TGG + chr8_4:47749971-47749990 None:intergenic 40.0%
GGGAAAGCCAATGACAACAT+TGG - chr8_4:47743108-47743127 Msa1329260:three_prime_UTR 45.0%
TCAAGCATGCAAGATTTGCG+GGG - chr8_4:47743135-47743154 Msa1329260:three_prime_UTR 45.0%
CGGGGAAAATATTGGGAAGA+CGG - chr8_4:47743153-47743172 Msa1329260:three_prime_UTR 45.0%
TCATAGCAAAGCCGACAAAC+AGG + chr8_4:47743220-47743239 None:intergenic 45.0%
! ACCCGATACAAGAGGCATAA+AGG - chr8_4:47743283-47743302 Msa1329260:three_prime_UTR 45.0%
! TGTCAATTAGCTTCCAGGCA+AGG + chr8_4:47743769-47743788 None:intergenic 45.0%
GACACCAATTTCCAGTGAAC+CGG - chr8_4:47743785-47743804 Msa1329260:CDS 45.0%
ACAGGTAGTCCTGCAGTTAT+TGG - chr8_4:47744077-47744096 Msa1329260:intron 45.0%
GAAGATTTCAGAGCGCATGT+TGG - chr8_4:47744178-47744197 Msa1329260:intron 45.0%
AGATTTCAGAGCGCATGTTG+GGG - chr8_4:47744180-47744199 Msa1329260:intron 45.0%
ACGGGCCTCTGAATGAAATT+TGG - chr8_4:47744346-47744365 Msa1329260:intron 45.0%
ATGACATTGAGAGCCTCTCA+GGG + chr8_4:47744415-47744434 None:intergenic 45.0%
TCAATGTCATCACCCATAGC+TGG - chr8_4:47744425-47744444 Msa1329260:intron 45.0%
CGGACGAATATGGAAGACTA+TGG + chr8_4:47744466-47744485 None:intergenic 45.0%
GCATGGAGAGAAAGAGTTGA+CGG - chr8_4:47744650-47744669 Msa1329260:CDS 45.0%
GTGCTTAGATTTAGGGACAG+AGG - chr8_4:47744963-47744982 Msa1329260:intron 45.0%
CAATAGAGCAATGAGTCAGG+AGG + chr8_4:47745038-47745057 None:intergenic 45.0%
CTCCTGACTCATTGCTCTAT+TGG - chr8_4:47745036-47745055 Msa1329260:intron 45.0%
TGCCAATAGAGCAATGAGTC+AGG + chr8_4:47745041-47745060 None:intergenic 45.0%
GTCACACATGCCGTTGAAAT+AGG + chr8_4:47745071-47745090 None:intergenic 45.0%
ATTGGTCATTGTTCTGCGAC+TGG - chr8_4:47745497-47745516 Msa1329260:intron 45.0%
AATGCATATGCATTGCGGAC+CGG + chr8_4:47745561-47745580 None:intergenic 45.0%
AGGGAACTGATCCAATATCC+AGG + chr8_4:47745625-47745644 None:intergenic 45.0%
AGATATGTTTCGCGGTTGAC+AGG + chr8_4:47745657-47745676 None:intergenic 45.0%
TAGCAGGAAACCTTATCCAC+TGG + chr8_4:47745911-47745930 None:intergenic 45.0%
TCCTGCTATGTCTCTGATGA+CGG - chr8_4:47745923-47745942 Msa1329260:CDS 45.0%
CAAGGATCGTAGAGCAATGA+AGG - chr8_4:47746105-47746124 Msa1329260:intron 45.0%
CGTAGAGCAATGAAGGTAAG+AGG - chr8_4:47746112-47746131 Msa1329260:intron 45.0%
CAACGAAAGTTCCGGAAGAA+GGG - chr8_4:47746294-47746313 Msa1329260:CDS 45.0%
TAATGCAAGATGGTACACCG+TGG - chr8_4:47746321-47746340 Msa1329260:CDS 45.0%
! TGGTCTCTGACGTTATTTCC+AGG + chr8_4:47746347-47746366 None:intergenic 45.0%
AATAACGTCAGAGACCATCC+GGG - chr8_4:47746350-47746369 Msa1329260:intron 45.0%
CAATTGGTCCGAAAGGTCAA+GGG + chr8_4:47746434-47746453 None:intergenic 45.0%
ACAATTGGTCCGAAAGGTCA+AGG + chr8_4:47746435-47746454 None:intergenic 45.0%
! CAGGTTTTCTTAGGCCAAAG+TGG - chr8_4:47746541-47746560 Msa1329260:CDS 45.0%
! GTTTTCTTAGGCCAAAGTGG+AGG - chr8_4:47746544-47746563 Msa1329260:CDS 45.0%
CACCAGCTTTCTTGTGATGT+TGG + chr8_4:47746636-47746655 None:intergenic 45.0%
TCTGGACATAGTTGTCTCAC+TGG - chr8_4:47746712-47746731 Msa1329260:intron 45.0%
! CATAGTTGTCTCACTGGTTG+TGG - chr8_4:47746718-47746737 Msa1329260:intron 45.0%
GGAGGCTATGTGCTTTATGA+TGG - chr8_4:47746845-47746864 Msa1329260:CDS 45.0%
GCAAACATGTTTACCGAGGT+TGG + chr8_4:47746874-47746893 None:intergenic 45.0%
CATCAAACCTCTGTGGAAAC+TGG + chr8_4:47746902-47746921 None:intergenic 45.0%
CAGTTTCCACAGAGGTTTGA+TGG - chr8_4:47746900-47746919 Msa1329260:intron 45.0%
AGAGGTTTGGATGGCATTCA+AGG - chr8_4:47747123-47747142 Msa1329260:CDS 45.0%
!! CATCCAGTACCGACATAAAC+AGG + chr8_4:47747150-47747169 None:intergenic 45.0%
TTTCTGTCATCACTCTGTGG+TGG - chr8_4:47747237-47747256 Msa1329260:CDS 45.0%
! GACTCTACGTTGATGGAGAA+TGG - chr8_4:47747710-47747729 Msa1329260:intron 45.0%
! TCTACGTTGATGGAGAATGG+TGG - chr8_4:47747713-47747732 Msa1329260:intron 45.0%
!! GTTTCTGGAGTAGCATTCTG+AGG + chr8_4:47747743-47747762 None:intergenic 45.0%
! TCCAGAAACTCTTCTGAAGG+AGG - chr8_4:47747754-47747773 Msa1329260:intron 45.0%
AGTATATAGACCGCCAACCA+CGG + chr8_4:47748263-47748282 None:intergenic 45.0%
GGTGCAGAACCTTTAAATGC+TGG + chr8_4:47748300-47748319 None:intergenic 45.0%
GTCTAAACCAAGTGCTTCGA+TGG - chr8_4:47748337-47748356 Msa1329260:CDS 45.0%
CATACCAGATGGGACAATGT+CGG + chr8_4:47748392-47748411 None:intergenic 45.0%
TGTCCCATCTGGTATGGTTA+TGG - chr8_4:47748396-47748415 Msa1329260:CDS 45.0%
CCACCATAACCATACCAGAT+GGG + chr8_4:47748402-47748421 None:intergenic 45.0%
TCCACCATAACCATACCAGA+TGG + chr8_4:47748403-47748422 None:intergenic 45.0%
GGCAGTGACTGGATAAATTG+TGG + chr8_4:47748463-47748482 None:intergenic 45.0%
GAACAAGTTCATCATCCCTC+AGG - chr8_4:47748530-47748549 Msa1329260:intron 45.0%
GGATATCCTTAGCGTGTGTT+TGG - chr8_4:47748689-47748708 Msa1329260:CDS 45.0%
CTTCATCCAAACACACGCTA+AGG + chr8_4:47748698-47748717 None:intergenic 45.0%
CACATTTGTTCGTGTCATGG+CGG + chr8_4:47748832-47748851 None:intergenic 45.0%
TTCAGGTGCCTATGTGTTAG+TGG - chr8_4:47748878-47748897 Msa1329260:CDS 45.0%
TCTGACTGCCACTAACACAT+AGG + chr8_4:47748889-47748908 None:intergenic 45.0%
TCTGACCTTCGGATGATGAT+TGG - chr8_4:47748988-47749007 Msa1329260:CDS 45.0%
CTGACCTTCGGATGATGATT+GGG - chr8_4:47748989-47749008 Msa1329260:CDS 45.0%
GTAACCCAATCATCATCCGA+AGG + chr8_4:47748996-47749015 None:intergenic 45.0%
AAGACCAGACCGCTCATATT+CGG + chr8_4:47749042-47749061 None:intergenic 45.0%
!! CTGGTCTTATTCCATTGGTC+GGG - chr8_4:47749054-47749073 Msa1329260:intron 45.0%
CTCAACAACTGTGCGAATGT+GGG - chr8_4:47749077-47749096 Msa1329260:intron 45.0%
!!! GAACAGTTTTGGGTTATCGG+TGG - chr8_4:47749285-47749304 Msa1329260:intron 45.0%
!! GGTGAAGTTTGTGTCGATTC+CGG + chr8_4:47749361-47749380 None:intergenic 45.0%
!! ATCTGATGCTTTGGAGGTGA+CGG + chr8_4:47749382-47749401 None:intergenic 45.0%
GTCTTCATCTGATGCTTTGG+AGG + chr8_4:47749388-47749407 None:intergenic 45.0%
TCCGTCTTCATCTGATGCTT+TGG + chr8_4:47749391-47749410 None:intergenic 45.0%
AATCGACCAGACCACAACAA+TGG + chr8_4:47749640-47749659 None:intergenic 45.0%
CCGTTTACTACAAGAGTCAC+TGG - chr8_4:47749702-47749721 Msa1329260:intron 45.0%
ATTCCACACTCCTCAGCTTT+AGG + chr8_4:47749729-47749748 None:intergenic 45.0%
TACACCATTAGGGTCCTGTT+AGG - chr8_4:47749964-47749983 Msa1329260:CDS 45.0%
GGGGAAGCTGCAAAAGACTA+CGG - chr8_4:47743575-47743594 Msa1329260:CDS 50.0%
ACCAATTTCCAGTGAACCGG+AGG - chr8_4:47743788-47743807 Msa1329260:CDS 50.0%
TCCTCCGGTTCACTGGAAAT+TGG + chr8_4:47743792-47743811 None:intergenic 50.0%
GGAGATAGTGAAGAGGAGGT+AGG - chr8_4:47744098-47744117 Msa1329260:intron 50.0%
GATAGTGAAGAGGAGGTAGG+AGG - chr8_4:47744101-47744120 Msa1329260:intron 50.0%
CACATTCCTAGGCTGACAAG+TGG - chr8_4:47744272-47744291 Msa1329260:intron 50.0%
TCTTGTCCACTTGTCAGCCT+AGG + chr8_4:47744281-47744300 None:intergenic 50.0%
TAGGCTGACAAGTGGACAAG+AGG - chr8_4:47744280-47744299 Msa1329260:intron 50.0%
ATTCAGAGGCCCGTAGTTGA+AGG + chr8_4:47744340-47744359 None:intergenic 50.0%
! GTGTCTGGAGAGTTTTCTGC+AGG - chr8_4:47744386-47744405 Msa1329260:intron 50.0%
TGACATTGAGAGCCTCTCAG+GGG + chr8_4:47744414-47744433 None:intergenic 50.0%
GATGACATTGAGAGCCTCTC+AGG + chr8_4:47744416-47744435 None:intergenic 50.0%
ATGTCATCACCCATAGCTGG+TGG - chr8_4:47744428-47744447 Msa1329260:intron 50.0%
TGTCATCACCCATAGCTGGT+GGG - chr8_4:47744429-47744448 Msa1329260:intron 50.0%
! AGCCAAGCTGCTTCTGAAAG+AGG - chr8_4:47744716-47744735 Msa1329260:CDS 50.0%
! GCCAAGCTGCTTCTGAAAGA+GGG - chr8_4:47744717-47744736 Msa1329260:CDS 50.0%
! CCAAGCTGCTTCTGAAAGAG+GGG - chr8_4:47744718-47744737 Msa1329260:CDS 50.0%
TAGAGCAATGAGTCAGGAGG+AGG + chr8_4:47745035-47745054 None:intergenic 50.0%
TTCAACGGCATGTGTGACTG+AGG - chr8_4:47745073-47745092 Msa1329260:intron 50.0%
GGTTGACAGGAAGCCACTTA+GGG + chr8_4:47745644-47745663 None:intergenic 50.0%
AGGAGAACCGTCTCAACTAG+CGG - chr8_4:47745793-47745812 Msa1329260:CDS 50.0%
CAGTACCGTTGACCCGTTAA+AGG - chr8_4:47745832-47745851 Msa1329260:CDS 50.0%
! AGGCTCCTTTAACGGGTCAA+CGG + chr8_4:47745840-47745859 None:intergenic 50.0%
ACGAGTGGAGGCTCCTTTAA+CGG + chr8_4:47745848-47745867 None:intergenic 50.0%
! TTCTGTGCGAAGTACCACTC+GGG + chr8_4:47746046-47746065 None:intergenic 50.0%
! CTTCTGTGCGAAGTACCACT+CGG + chr8_4:47746047-47746066 None:intergenic 50.0%
ATAGACGAATGTCGAGCCAG+CGG + chr8_4:47746159-47746178 None:intergenic 50.0%
TGCGAAGGCAACGAAAGTTC+CGG - chr8_4:47746286-47746305 Msa1329260:CDS 50.0%
GCAACGAAAGTTCCGGAAGA+AGG - chr8_4:47746293-47746312 Msa1329260:CDS 50.0%
GAAAGTTCCGGAAGAAGGGT+GGG - chr8_4:47746298-47746317 Msa1329260:CDS 50.0%
TGCATTACCCACCCTTCTTC+CGG + chr8_4:47746308-47746327 None:intergenic 50.0%
GAAGGGTGGGTAATGCAAGA+TGG - chr8_4:47746311-47746330 Msa1329260:CDS 50.0%
! CTGACGTTATTTCCAGGCCA+CGG + chr8_4:47746341-47746360 None:intergenic 50.0%
CAACCAACCTGGATCATTCC+CGG + chr8_4:47746371-47746390 None:intergenic 50.0%
CAGTGTCAAGTCCTCCACTT+TGG + chr8_4:47746558-47746577 None:intergenic 50.0%
AGTGGAGGACTTGACACTGA+TGG - chr8_4:47746559-47746578 Msa1329260:intron 50.0%
!! GTTTCTCGTGAAAAGCGTCC+AGG - chr8_4:47746607-47746626 Msa1329260:intron 50.0%
GCTATGTCCAGTTTCCACAG+AGG - chr8_4:47746892-47746911 Msa1329260:intron 50.0%
GGTCCTGTTTATGTCGGTAC+TGG - chr8_4:47747144-47747163 Msa1329260:CDS 50.0%
CAGAGTGATGACAGAAACCC+AGG + chr8_4:47747234-47747253 None:intergenic 50.0%
GGGTTTCTGTCATCACTCTG+TGG - chr8_4:47747234-47747253 Msa1329260:CDS 50.0%
GACTGAAGATCGGCACAGTT+GGG + chr8_4:47747332-47747351 None:intergenic 50.0%
AGACTGAAGATCGGCACAGT+TGG + chr8_4:47747333-47747352 None:intergenic 50.0%
! AACTGTGCCGATCTTCAGTC+TGG - chr8_4:47747332-47747351 Msa1329260:intron 50.0%
GCCTCCTTCAGAAGAGTTTC+TGG + chr8_4:47747758-47747777 None:intergenic 50.0%
GTATATAGACCGCCAACCAC+GGG + chr8_4:47748262-47748281 None:intergenic 50.0%
CCTTTAAATGCTGGCCGCTT+AGG + chr8_4:47748291-47748310 None:intergenic 50.0%
CCTAAGCGGCCAGCATTTAA+AGG - chr8_4:47748288-47748307 Msa1329260:intron 50.0%
! CTAAAGCCCATCGAAGCACT+TGG + chr8_4:47748347-47748366 None:intergenic 50.0%
! CAAGTGCTTCGATGGGCTTT+AGG - chr8_4:47748345-47748364 Msa1329260:CDS 50.0%
TTAGCCGACATTGTCCCATC+TGG - chr8_4:47748385-47748404 Msa1329260:CDS 50.0%
CGACATTGTCCCATCTGGTA+TGG - chr8_4:47748390-47748409 Msa1329260:CDS 50.0%
CCCATCTGGTATGGTTATGG+TGG - chr8_4:47748399-47748418 Msa1329260:CDS 50.0%
TTCGTGAGAAGACAGACAGC+TGG + chr8_4:47748513-47748532 None:intergenic 50.0%
CGCCATGACACGAACAAATG+TGG - chr8_4:47748830-47748849 Msa1329260:CDS 50.0%
CATTCCGAATATGAGCGGTC+TGG - chr8_4:47749035-47749054 Msa1329260:intron 50.0%
!! GCGGTCTGGTCTTATTCCAT+TGG - chr8_4:47749049-47749068 Msa1329260:intron 50.0%
GCTCAACAACTGTGCGAATG+TGG - chr8_4:47749076-47749095 Msa1329260:intron 50.0%
CCATCTCATCTCGAGGATTC+CGG + chr8_4:47749232-47749251 None:intergenic 50.0%
ATCCTCGAGATGAGATGGAG+TGG - chr8_4:47749234-47749253 Msa1329260:intron 50.0%
GAGATGAGATGGAGTGGTGT+TGG - chr8_4:47749240-47749259 Msa1329260:intron 50.0%
AACCTGGTTGGAGTTGTTGC+TGG - chr8_4:47749480-47749499 Msa1329260:intron 50.0%
TACCAGCAACAACTCCAACC+AGG + chr8_4:47749485-47749504 None:intergenic 50.0%
CAAAGAGTGGACCCCATGAT+TGG + chr8_4:47749533-47749552 None:intergenic 50.0%
CAATCATGGGGTCCACTCTT+TGG - chr8_4:47749531-47749550 Msa1329260:intron 50.0%
GGCGTCCCATAAGACCTTTA+AGG + chr8_4:47749602-47749621 None:intergenic 50.0%
GACCAGACCACAACAATGGT+CGG + chr8_4:47749636-47749655 None:intergenic 50.0%
AGTCACTGGTCCTAAAGCTG+AGG - chr8_4:47749716-47749735 Msa1329260:intron 50.0%
TACTCTCTCCTCCGGTTCAC+TGG + chr8_4:47743799-47743818 None:intergenic 55.0%
TTTCAGAGCGCATGTTGGGG+TGG - chr8_4:47744183-47744202 Msa1329260:intron 55.0%
TTGGGGTGGCAGTTGACACT+CGG - chr8_4:47744197-47744216 Msa1329260:intron 55.0%
GTCATCACCCATAGCTGGTG+GGG - chr8_4:47744430-47744449 Msa1329260:intron 55.0%
GGAGAGAAAGAGTTGACGGC+TGG - chr8_4:47744654-47744673 Msa1329260:CDS 55.0%
!! GCAGCTTGGCTTGTGCTCAT+TGG + chr8_4:47744707-47744726 None:intergenic 55.0%
CCCCTCTTTCAGAAGCAGCT+TGG + chr8_4:47744721-47744740 None:intergenic 55.0%
CGGTTGACAGGAAGCCACTT+AGG + chr8_4:47745645-47745664 None:intergenic 55.0%
TCGACAGCCGCTAGTTGAGA+CGG + chr8_4:47745803-47745822 None:intergenic 55.0%
CGAGTGGAGGCTCCTTTAAC+GGG + chr8_4:47745847-47745866 None:intergenic 55.0%
! GTATTGGCAGTCACGAGTGG+AGG + chr8_4:47745860-47745879 None:intergenic 55.0%
!! ACGGTATTGGCAGTCACGAG+TGG + chr8_4:47745863-47745882 None:intergenic 55.0%
GCCGTCATCAGAGACATAGC+AGG + chr8_4:47745927-47745946 None:intergenic 55.0%
CGAAAGTTCCGGAAGAAGGG+TGG - chr8_4:47746297-47746316 Msa1329260:CDS 55.0%
AGACCATCCGGGAATGATCC+AGG - chr8_4:47746361-47746380 Msa1329260:intron 55.0%
CAACCTGGATCATTCCCGGA+TGG + chr8_4:47746367-47746386 None:intergenic 55.0%
CATCCGGGAATGATCCAGGT+TGG - chr8_4:47746365-47746384 Msa1329260:intron 55.0%
!! CAACAGCAAGGCTTTGAGGG+AGG - chr8_4:47746827-47746846 Msa1329260:CDS 55.0%
! TGTGCCGATCTTCAGTCTGG+AGG - chr8_4:47747335-47747354 Msa1329260:intron 55.0%
AGAAGGGGAATGGCAGTGAC+TGG + chr8_4:47748474-47748493 None:intergenic 55.0%
GAGAAGACAGACAGCTGGCA+AGG + chr8_4:47748508-47748527 None:intergenic 55.0%
CAGTTGTTGAGCCCGACCAA+TGG + chr8_4:47749068-47749087 None:intergenic 55.0%
CCGGAATCCTCGAGATGAGA+TGG - chr8_4:47749229-47749248 Msa1329260:intron 55.0%
CACCACTCCATCTCATCTCG+AGG + chr8_4:47749239-47749258 None:intergenic 55.0%
! GTGGTGTTGGAATCGACGAG+TGG - chr8_4:47749253-47749272 Msa1329260:intron 55.0%
GTGTTGGAATCGACGAGTGG+TGG - chr8_4:47749256-47749275 Msa1329260:intron 55.0%
TTGGGTTATCGGTGGCGTGT+CGG - chr8_4:47749293-47749312 Msa1329260:intron 55.0%
CAATGGTCGGCGTTCGATTC+TGG + chr8_4:47749623-47749642 None:intergenic 55.0%
TCGAACGCCGACCATTGTTG+TGG - chr8_4:47749626-47749645 Msa1329260:intron 55.0%
GGTCCTAAAGCTGAGGAGTG+TGG - chr8_4:47749723-47749742 Msa1329260:intron 55.0%
TGGGGTGGCAGTTGACACTC+GGG - chr8_4:47744198-47744217 Msa1329260:intron 60.0%
CAGTTGACACTCGGGCGATC+AGG - chr8_4:47744206-47744225 Msa1329260:intron 60.0%
TTTCTGCAGGCTCCCCTGAG+AGG - chr8_4:47744399-47744418 Msa1329260:intron 60.0%
CGCTTCACCCCACCAGCTAT+GGG + chr8_4:47744440-47744459 None:intergenic 60.0%
ACGCTTCACCCCACCAGCTA+TGG + chr8_4:47744441-47744460 None:intergenic 60.0%
! GCTGCTTCTGAAAGAGGGGC+TGG - chr8_4:47744722-47744741 Msa1329260:CDS 60.0%
AAGCTCGGCAGCCTCTTTCC+AGG - chr8_4:47745436-47745455 Msa1329260:CDS 60.0%
TCGGCAGCCTCTTTCCAGGA+AGG - chr8_4:47745440-47745459 Msa1329260:CDS 60.0%
AAGTACCACTCGGGTGCACG+GGG + chr8_4:47746037-47746056 None:intergenic 60.0%
! GAAGTACCACTCGGGTGCAC+GGG + chr8_4:47746038-47746057 None:intergenic 60.0%
! CGAAGTACCACTCGGGTGCA+CGG + chr8_4:47746039-47746058 None:intergenic 60.0%
CAAGATGGTACACCGTGGCC+TGG - chr8_4:47746326-47746345 Msa1329260:CDS 60.0%
GGATTCAAGATGCACGCCCG+TGG - chr8_4:47748243-47748262 Msa1329260:intron 60.0%
TCAAGATGCACGCCCGTGGT+TGG - chr8_4:47748247-47748266 Msa1329260:intron 60.0%
CGCCGACCATTGTTGTGGTC+TGG - chr8_4:47749631-47749650 Msa1329260:intron 60.0%
CTCGGGCGATCAGGAGAGCT+TGG - chr8_4:47744215-47744234 Msa1329260:intron 65.0%
TTGAACCCCGTGCACCCGAG+TGG - chr8_4:47746029-47746048 Msa1329260:intron 65.0%
AGATGCACGCCCGTGGTTGG+CGG - chr8_4:47748250-47748269 Msa1329260:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 47743104 47750006 47743104 ID=Msa1329260;Name=Msa1329260
chr8_4 mRNA 47743104 47750006 47743104 ID=Msa1329260-mRNA-1;Parent=Msa1329260;Name=Msa1329260-mRNA-1;_AED=0.07;_eAED=0.07;_QI=14|1|1|1|1|1|13|248|1063
chr8_4 exon 47743104 47743936 47743104 ID=Msa1329260-mRNA-1:exon:13679;Parent=Msa1329260-mRNA-1
chr8_4 exon 47744559 47744909 47744559 ID=Msa1329260-mRNA-1:exon:13678;Parent=Msa1329260-mRNA-1
chr8_4 exon 47745281 47745483 47745281 ID=Msa1329260-mRNA-1:exon:13677;Parent=Msa1329260-mRNA-1
chr8_4 exon 47745732 47745996 47745732 ID=Msa1329260-mRNA-1:exon:13676;Parent=Msa1329260-mRNA-1
chr8_4 exon 47746139 47746351 47746139 ID=Msa1329260-mRNA-1:exon:13675;Parent=Msa1329260-mRNA-1
chr8_4 exon 47746441 47746566 47746441 ID=Msa1329260-mRNA-1:exon:13674;Parent=Msa1329260-mRNA-1
chr8_4 exon 47746728 47746865 47746728 ID=Msa1329260-mRNA-1:exon:13673;Parent=Msa1329260-mRNA-1
chr8_4 exon 47746984 47747329 47746984 ID=Msa1329260-mRNA-1:exon:13672;Parent=Msa1329260-mRNA-1
chr8_4 exon 47747416 47747682 47747416 ID=Msa1329260-mRNA-1:exon:13671;Parent=Msa1329260-mRNA-1
chr8_4 exon 47748324 47748498 47748324 ID=Msa1329260-mRNA-1:exon:13670;Parent=Msa1329260-mRNA-1
chr8_4 exon 47748610 47748724 47748610 ID=Msa1329260-mRNA-1:exon:13669;Parent=Msa1329260-mRNA-1
chr8_4 exon 47748809 47749029 47748809 ID=Msa1329260-mRNA-1:exon:13668;Parent=Msa1329260-mRNA-1
chr8_4 exon 47749806 47750006 47749806 ID=Msa1329260-mRNA-1:exon:13667;Parent=Msa1329260-mRNA-1
chr8_4 five_prime_UTR 47749993 47750006 47749993 ID=Msa1329260-mRNA-1:five_prime_utr;Parent=Msa1329260-mRNA-1
chr8_4 CDS 47749806 47749992 47749806 ID=Msa1329260-mRNA-1:cds;Parent=Msa1329260-mRNA-1
chr8_4 CDS 47748809 47749029 47748809 ID=Msa1329260-mRNA-1:cds;Parent=Msa1329260-mRNA-1
chr8_4 CDS 47748610 47748724 47748610 ID=Msa1329260-mRNA-1:cds;Parent=Msa1329260-mRNA-1
chr8_4 CDS 47748324 47748498 47748324 ID=Msa1329260-mRNA-1:cds;Parent=Msa1329260-mRNA-1
chr8_4 CDS 47747416 47747682 47747416 ID=Msa1329260-mRNA-1:cds;Parent=Msa1329260-mRNA-1
chr8_4 CDS 47746984 47747329 47746984 ID=Msa1329260-mRNA-1:cds;Parent=Msa1329260-mRNA-1
chr8_4 CDS 47746728 47746865 47746728 ID=Msa1329260-mRNA-1:cds;Parent=Msa1329260-mRNA-1
chr8_4 CDS 47746441 47746566 47746441 ID=Msa1329260-mRNA-1:cds;Parent=Msa1329260-mRNA-1
chr8_4 CDS 47746139 47746351 47746139 ID=Msa1329260-mRNA-1:cds;Parent=Msa1329260-mRNA-1
chr8_4 CDS 47745732 47745996 47745732 ID=Msa1329260-mRNA-1:cds;Parent=Msa1329260-mRNA-1
chr8_4 CDS 47745281 47745483 47745281 ID=Msa1329260-mRNA-1:cds;Parent=Msa1329260-mRNA-1
chr8_4 CDS 47744559 47744909 47744559 ID=Msa1329260-mRNA-1:cds;Parent=Msa1329260-mRNA-1
chr8_4 CDS 47743352 47743936 47743352 ID=Msa1329260-mRNA-1:cds;Parent=Msa1329260-mRNA-1
chr8_4 three_prime_UTR 47743104 47743351 47743104 ID=Msa1329260-mRNA-1:three_prime_utr;Parent=Msa1329260-mRNA-1
Gene Sequence

>Msa1329260

ATGACAACATTGGGTGATCAAGCATGCAAGATTTGCGGGGAAAATATTGGGAAGACGGTTGATGGCGAACCATTCATTGCATGTGATGCTTGTGCTTTTCCTGTTTGTCGGCTTTGCTATGAGTATGAAAGGAAAGATGGGAAACAGTCTTGTCTTCAGTGTAAAACCCGATACAAGAGGCATAAAGGTAGTCCTGCAGTTATTGGAGATAGTGAAGAGGAGGTAGGAGGTGATGATGTTGCTCTTGAATTCAATTATGATTTGGAAAACCAAAACCAAAAGCAGAAGATTTCAGAGCGCATGTTGGGGTGGCAGTTGACACTCGGGCGATCAGGAGAGCTTGGCGCTCCAAATTATGATAAGGAAGTTTCTCACAATCACATTCCTAGGCTGACAAGTGGACAAGAGGTGTCTGGAGAGTTTTCTGCAGGCTCCCCTGAGAGGCTCTCAATGTCATCACCCATAGCTGGTGGGGTGAAGCGTGTCCATAGTCTTCCATATTCGTCCGATGTTAATCAATCTCCAAATACCAGGATTGTTGACGCAAAATTGGGCAATGTAGCATGGAGAGAAAGAGTTGACGGCTGGAAGATGAAGCCAGAAAAGAATGCTGCTCCAATGAGCACAAGCCAAGCTGCTTCTGAAAGAGGGGCTGGAGATATTGATGCCAGATCTGATGTATTTGATGATTCATTGTTGAATGATGAAGCTCGGCAGCCTCTTTCCAGGAAGGTTTCTATTCCATCATCTAGGATAAATCCATATCGATTGGTCATTGTTCTGCGACTGGTTGTCCTTTGCATTTTCTTGCATTATCGGTTAACAAATCCGGTCCGCAATGCATATGCATTATGGCTGGTATCGGTTATATGCGAGATTTGGTTTGCCATATCCTGGATATTGGATCAGTTCCCTAAGTGGCTTCCTGTCAACCGCGAAACATATCTCGATAGACTTGCACTAAGATATGATCGGGAAGGAGAACCGTCTCAACTAGCGGCTGTCGACATTTTTGTCAGTACCGTTGACCCGTTAAAGGAGCCTCCACTCGTGACTGCCAATACCGTACTTTCTATTCTTTCAGTTGACTATCCAGTGGATAAGGTTTCCTGCTATGTCTCTGATGACGGCGCCGCTATGTTGACATTTGAAGCTCTTGCTGAAACATCAGAGTTTGCGAGAAAATGGGTTCCTTTCACCAAGAAGTATAATATTGAACCCCGTGCACCCGAGTGGTACTTCGCACAGAAGATTGATTACTTGAAGGATAAAGTTCAGACATCATTTGTCAAGGATCGTAGAGCAATGAAGAGAGAATACGAAGAATTTAAAATTCGTATTAATGGACTTGTTGCGAAGGCAACGAAAGTTCCGGAAGAAGGGTGGGTAATGCAAGATGGTACACCGTGGCCTGGAAATAACGTCAGAGACCATCCGGGAATGATCCAGGTTTTCTTAGGCCAAAGTGGAGGACTTGACACTGATGGCAATGAACTTCCCCGTTTAGTCTATGTTTCTCGTGAAAAGCGTCCAGGTTTCCAACATCACAAGAAAGCTGGTGCCATGAATGCACTTGTTCGAGTATCTGCTGTCCTTACTAATGGACCTTTCTTATTGAATCTTGATTGTGATCACTACATAAACAACAGCAAGGCTTTGAGGGAGGCTATGTGCTTTATGATGGATCCCAACCTCGGTAAACATGTTTGCTATGTCCAGTTTCCACAGAGGTTTGATGGTATTGATAGGAACGATCGATATGCCAATCGTAATACTGTTTTCTTTGACATAAATCTGAGAGGTTTGGATGGCATTCAAGGTCCTGTTTATGTCGGTACTGGATGTGTCTTCAATAGGACGGCTTTATACGGCGAAGAACCTCCTCTTAAAGTGAAACATAAAAAGCCTGGGTTTCTGTCATCACTCTGTGGTGGAAGTAGAAAGAAGAGTTCAAAATCTAGCAAGAAAGGATCAGACAAGAAAAAGTATAACAAGCACGTCGACCCAACTGTGCCGATCTTCAGTCTGGAGGATATTGAAGAAGGAGTAGAAGGTTCTGGATTTGATGATGAGAGAGCACAACGTATGTCACGAGATGATTATGAGAAAAGATTCGGCCAATCATCTGTTTTTGTTGACTCTACGTTGATGGAGAATGGTGGTGTTCCTCAGAATGCTACTCCAGAAACTCTTCTGAAGGAGGCTATTCATGTTATCAGCTGTGGTTATGAGGATAAATCAGAATGGGGAACAGAGATAGGATGGATTTATGGTTCCGTCACAGAAGATATTCTTACTGGATTCAAGATGCACGCCCGTGGTTGGCGGTCTATATACTGCATGCCTAAGCGGCCAGCATTTAAAGGTTCTGCACCCATCAATCTTTCTGATCGTCTAAACCAAGTGCTTCGATGGGCTTTAGGTTCTGTTGAAATTCTTTTTAGCCGACATTGTCCCATCTGGTATGGTTATGGTGGAAGACTAAAGTGGCTTGAAAGGTTTGCATACATTAACACCACAATTTATCCAGTCACTGCCATTCCCCTTCTCATGTATTGTACCTTGCCAGCTGTCTGTCTTCTCACGAACAAGTTCATCATCCCTCAGATTAGCAACTTAGCTAGTATATGGTTTATCTCTCTCTTTCTTTCAATCTTCGCAACCGGAATCCTCGAGATGAGATGGAGTGGTGTTGGAATCGACGAGTGGTGGAGAAATGAACAGTTTTGGGTTATCGGTGGCGTGTCGGCCCATCTTTTTGCCGTGTTTCAAGGTCTACTAAAAGTACTTGCCGGAATCGACACAAACTTCACCGTCACCTCCAAAGCATCAGATGAAGACGGAGACTCCGCAGAACTCTACATGTTCAAATGGACAACACTTCTCATTCCTCCAACAACGCTTCTCATAATAAACCTGGTTGGAGTTGTTGCTGGTATATCTTATGCTATCAACAGTGGTTACCAATCATGGGGTCCACTCTTTGGTAAACTTTTCTTTGCATTTTGGGTTATCGTTCATCTCTACCCTTTCCTTAAAGGTCTTATGGGACGCCAGAATCGAACGCCGACCATTGTTGTGGTCTGGTCGATTCTTCTTGCGTCTATTTTCTCTCTATTATGGGTTCGAGTTGATCCGTTTACTACAAGAGTCACTGGTCCTAAAGCTGAGGAGTGTGGAATTAACTGCTAG
Protein sequence

>Msa1329260

MTTLGDQACKICGENIGKTVDGEPFIACDACAFPVCRLCYEYERKDGKQSCLQCKTRYKRHKGSPAVIGDSEEEVGGDDVALEFNYDLENQNQKQKISERMLGWQLTLGRSGELGAPNYDKEVSHNHIPRLTSGQEVSGEFSAGSPERLSMSSPIAGGVKRVHSLPYSSDVNQSPNTRIVDAKLGNVAWRERVDGWKMKPEKNAAPMSTSQAASERGAGDIDARSDVFDDSLLNDEARQPLSRKVSIPSSRINPYRLVIVLRLVVLCIFLHYRLTNPVRNAYALWLVSVICEIWFAISWILDQFPKWLPVNRETYLDRLALRYDREGEPSQLAAVDIFVSTVDPLKEPPLVTANTVLSILSVDYPVDKVSCYVSDDGAAMLTFEALAETSEFARKWVPFTKKYNIEPRAPEWYFAQKIDYLKDKVQTSFVKDRRAMKREYEEFKIRINGLVAKATKVPEEGWVMQDGTPWPGNNVRDHPGMIQVFLGQSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALVRVSAVLTNGPFLLNLDCDHYINNSKALREAMCFMMDPNLGKHVCYVQFPQRFDGIDRNDRYANRNTVFFDINLRGLDGIQGPVYVGTGCVFNRTALYGEEPPLKVKHKKPGFLSSLCGGSRKKSSKSSKKGSDKKKYNKHVDPTVPIFSLEDIEEGVEGSGFDDERAQRMSRDDYEKRFGQSSVFVDSTLMENGGVPQNATPETLLKEAIHVISCGYEDKSEWGTEIGWIYGSVTEDILTGFKMHARGWRSIYCMPKRPAFKGSAPINLSDRLNQVLRWALGSVEILFSRHCPIWYGYGGRLKWLERFAYINTTIYPVTAIPLLMYCTLPAVCLLTNKFIIPQISNLASIWFISLFLSIFATGILEMRWSGVGIDEWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDSAELYMFKWTTLLIPPTTLLIINLVGVVAGISYAINSGYQSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVVWSILLASIFSLLWVRVDPFTTRVTGPKAEECGINC*