Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1342960 | XP_003607199.1 | 99.640 | 278 | 1 | 0 | 2 | 279 | 10 | 287 | 0.0 | 570 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1342960 | sp|Q42564|APX3_ARATH | 79.211 | 279 | 57 | 1 | 2 | 279 | 9 | 287 | 1.15e-156 | 441 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1342960 | G7JNF5 | 99.640 | 278 | 1 | 0 | 2 | 279 | 10 | 287 | 0.0 | 570 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001550 | Msa1342960 | 0.836135 | 1.117642e-56 | -8.615850e-47 |
| Msa0002110 | Msa1342960 | 0.880229 | 6.516701e-70 | -8.615850e-47 |
| Msa0007810 | Msa1342960 | 0.828985 | 6.631067e-55 | -8.615850e-47 |
| Msa0011410 | Msa1342960 | 0.805471 | 1.314049e-49 | -8.615850e-47 |
| Msa0011440 | Msa1342960 | 0.820617 | 6.240458e-53 | -8.615850e-47 |
| Msa0011450 | Msa1342960 | 0.838361 | 3.009708e-57 | -8.615850e-47 |
| Msa0017300 | Msa1342960 | 0.846413 | 2.206328e-59 | -8.615850e-47 |
| Msa0029520 | Msa1342960 | 0.850382 | 1.761142e-60 | -8.615850e-47 |
| Msa0033840 | Msa1342960 | 0.822731 | 2.024399e-53 | -8.615850e-47 |
| Msa0041950 | Msa1342960 | 0.807298 | 5.412029e-50 | -8.615850e-47 |
| Msa0042490 | Msa1342960 | 0.802637 | 5.104856e-49 | -8.615850e-47 |
| Msa0042950 | Msa1342960 | 0.832927 | 7.149455e-56 | -8.615850e-47 |
| Msa0044530 | Msa1342960 | 0.810191 | 1.303112e-50 | -8.615850e-47 |
| Msa0046020 | Msa1342960 | 0.805961 | 1.036887e-49 | -8.615850e-47 |
| Msa0056230 | Msa1342960 | 0.826833 | 2.183005e-54 | -8.615850e-47 |
| Msa0065130 | Msa1342960 | -0.807563 | 4.756220e-50 | -8.615850e-47 |
| Msa0065670 | Msa1342960 | 0.847966 | 8.275708e-60 | -8.615850e-47 |
| Msa0066890 | Msa1342960 | 0.863814 | 1.903194e-64 | -8.615850e-47 |
| Msa0067370 | Msa1342960 | 0.804725 | 1.881997e-49 | -8.615850e-47 |
| Msa0067590 | Msa1342960 | 0.848945 | 4.435926e-60 | -8.615850e-47 |
| Msa0075990 | Msa1342960 | 0.811289 | 7.541253e-51 | -8.615850e-47 |
| Msa0077570 | Msa1342960 | 0.822894 | 1.855508e-53 | -8.615850e-47 |
| Msa0079580 | Msa1342960 | 0.803066 | 4.161779e-49 | -8.615850e-47 |
| Msa0081610 | Msa1342960 | 0.871923 | 4.718445e-67 | -8.615850e-47 |
| Msa0089700 | Msa1342960 | 0.805493 | 1.299743e-49 | -8.615850e-47 |
| Msa0091220 | Msa1342960 | 0.800857 | 1.183671e-48 | -8.615850e-47 |
| Msa0091240 | Msa1342960 | 0.809090 | 2.246553e-50 | -8.615850e-47 |
| Msa0093950 | Msa1342960 | 0.859232 | 4.769721e-63 | -8.615850e-47 |
| Msa0094170 | Msa1342960 | 0.839322 | 1.698052e-57 | -8.615850e-47 |
| Msa0095810 | Msa1342960 | 0.876297 | 1.561344e-68 | -8.615850e-47 |
| Msa0111110 | Msa1342960 | 0.874912 | 4.659739e-68 | -8.615850e-47 |
| Msa0112550 | Msa1342960 | 0.804002 | 2.662202e-49 | -8.615850e-47 |
| Msa0113370 | Msa1342960 | 0.837872 | 4.022732e-57 | -8.615850e-47 |
| Msa0120160 | Msa1342960 | 0.808300 | 3.314298e-50 | -8.615850e-47 |
| Msa0603690 | Msa1342960 | 0.810161 | 1.322810e-50 | -8.615850e-47 |
| Msa0605040 | Msa1342960 | 0.835447 | 1.669315e-56 | -8.615850e-47 |
| Msa0605160 | Msa1342960 | 0.836107 | 1.135897e-56 | -8.615850e-47 |
| Msa0606340 | Msa1342960 | 0.813187 | 2.905616e-51 | -8.615850e-47 |
| Msa0606350 | Msa1342960 | 0.805730 | 1.159222e-49 | -8.615850e-47 |
| Msa0616890 | Msa1342960 | 0.813019 | 3.164170e-51 | -8.615850e-47 |
| Msa0637930 | Msa1342960 | 0.860334 | 2.221090e-63 | -8.615850e-47 |
| Msa0638010 | Msa1342960 | 0.863173 | 3.007915e-64 | -8.615850e-47 |
| Msa0660960 | Msa1342960 | 0.814948 | 1.187798e-51 | -8.615850e-47 |
| Msa0671160 | Msa1342960 | 0.829544 | 4.851554e-55 | -8.615850e-47 |
| Msa0671170 | Msa1342960 | -0.828941 | 6.794440e-55 | -8.615850e-47 |
| Msa0671200 | Msa1342960 | 0.821977 | 3.030168e-53 | -8.615850e-47 |
| Msa0671210 | Msa1342960 | -0.845695 | 3.459550e-59 | -8.615850e-47 |
| Msa0676570 | Msa1342960 | 0.825215 | 5.292754e-54 | -8.615850e-47 |
| Msa0683200 | Msa1342960 | 0.801603 | 8.330223e-49 | -8.615850e-47 |
| Msa0686950 | Msa1342960 | 0.958783 | 9.999640e-117 | -8.615850e-47 |
| Msa0690100 | Msa1342960 | 0.808690 | 2.736514e-50 | -8.615850e-47 |
| Msa0701800 | Msa1342960 | 0.819959 | 8.828991e-53 | -8.615850e-47 |
| Msa0711110 | Msa1342960 | 0.800246 | 1.576658e-48 | -8.615850e-47 |
| Msa0742370 | Msa1342960 | 0.867518 | 1.290411e-65 | -8.615850e-47 |
| Msa0744640 | Msa1342960 | -0.801912 | 7.196768e-49 | -8.615850e-47 |
| Msa0752490 | Msa1342960 | 0.813734 | 2.203301e-51 | -8.615850e-47 |
| Msa0779450 | Msa1342960 | 0.868678 | 5.463225e-66 | -8.615850e-47 |
| Msa0788450 | Msa1342960 | 0.833793 | 4.347710e-56 | -8.615850e-47 |
| Msa0793130 | Msa1342960 | 0.806808 | 6.871413e-50 | -8.615850e-47 |
| Msa0795750 | Msa1342960 | -0.810401 | 1.173843e-50 | -8.615850e-47 |
| Msa0796580 | Msa1342960 | 0.843933 | 1.032878e-58 | -8.615850e-47 |
| Msa0800480 | Msa1342960 | -0.807398 | 5.155451e-50 | -8.615850e-47 |
| Msa0823480 | Msa1342960 | 0.845103 | 5.002908e-59 | -8.615850e-47 |
| Msa0825570 | Msa1342960 | 0.834186 | 3.466495e-56 | -8.615850e-47 |
| Msa0826540 | Msa1342960 | 0.831432 | 1.675165e-55 | -8.615850e-47 |
| Msa0827520 | Msa1342960 | 0.958168 | 4.580535e-116 | -8.615850e-47 |
| Msa0829210 | Msa1342960 | 0.808992 | 2.357565e-50 | -8.615850e-47 |
| Msa0829250 | Msa1342960 | 0.806387 | 8.430153e-50 | -8.615850e-47 |
| Msa0833950 | Msa1342960 | 0.875687 | 2.532622e-68 | -8.615850e-47 |
| Msa0841730 | Msa1342960 | -0.803042 | 4.210528e-49 | -8.615850e-47 |
| Msa0120880 | Msa1342960 | -0.809581 | 1.762950e-50 | -8.615850e-47 |
| Msa0123800 | Msa1342960 | -0.822184 | 2.713872e-53 | -8.615850e-47 |
| Msa0126000 | Msa1342960 | 0.813741 | 2.194875e-51 | -8.615850e-47 |
| Msa0133140 | Msa1342960 | 0.826032 | 3.387818e-54 | -8.615850e-47 |
| Msa0136870 | Msa1342960 | 0.871530 | 6.369601e-67 | -8.615850e-47 |
| Msa0138990 | Msa1342960 | 0.866917 | 2.007568e-65 | -8.615850e-47 |
| Msa0140770 | Msa1342960 | 0.876666 | 1.164257e-68 | -8.615850e-47 |
| Msa0151380 | Msa1342960 | 0.832078 | 1.160622e-55 | -8.615850e-47 |
| Msa0151510 | Msa1342960 | 0.849059 | 4.122313e-60 | -8.615850e-47 |
| Msa0152220 | Msa1342960 | -0.807098 | 5.966519e-50 | -8.615850e-47 |
| Msa0154880 | Msa1342960 | 0.838368 | 2.998477e-57 | -8.615850e-47 |
| Msa0154890 | Msa1342960 | 0.865382 | 6.151297e-65 | -8.615850e-47 |
| Msa0156760 | Msa1342960 | -0.823488 | 1.348310e-53 | -8.615850e-47 |
| Msa0158890 | Msa1342960 | 0.814304 | 1.649019e-51 | -8.615850e-47 |
| Msa0168310 | Msa1342960 | -0.839511 | 1.516669e-57 | -8.615850e-47 |
| Msa0168770 | Msa1342960 | 0.842219 | 2.955464e-58 | -8.615850e-47 |
| Msa0173950 | Msa1342960 | 0.869217 | 3.654004e-66 | -8.615850e-47 |
| Msa0175240 | Msa1342960 | 0.808564 | 2.911384e-50 | -8.615850e-47 |
| Msa0178840 | Msa1342960 | 0.847179 | 1.362278e-59 | -8.615850e-47 |
| Msa0183310 | Msa1342960 | 0.826747 | 2.289861e-54 | -8.615850e-47 |
| Msa0186400 | Msa1342960 | 0.816739 | 4.734147e-52 | -8.615850e-47 |
| Msa0187590 | Msa1342960 | 0.843375 | 1.456347e-58 | -8.615850e-47 |
| Msa0206040 | Msa1342960 | 0.810730 | 9.967488e-51 | -8.615850e-47 |
| Msa0220400 | Msa1342960 | 0.873561 | 1.337074e-67 | -8.615850e-47 |
| Msa0221850 | Msa1342960 | 0.826886 | 2.120394e-54 | -8.615850e-47 |
| Msa0223500 | Msa1342960 | 0.830524 | 2.798342e-55 | -8.615850e-47 |
| Msa0223830 | Msa1342960 | 0.813655 | 2.293726e-51 | -8.615850e-47 |
| Msa0225190 | Msa1342960 | 0.826856 | 2.155749e-54 | -8.615850e-47 |
| Msa0225790 | Msa1342960 | 0.838249 | 3.216719e-57 | -8.615850e-47 |
| Msa0234410 | Msa1342960 | 0.807808 | 4.218366e-50 | -8.615850e-47 |
| Msa1236120 | Msa1342960 | 0.836280 | 1.026219e-56 | -8.615850e-47 |
| Msa1236190 | Msa1342960 | 0.819000 | 1.461021e-52 | -8.615850e-47 |
| Msa1251440 | Msa1342960 | 0.813301 | 2.743796e-51 | -8.615850e-47 |
| Msa1258030 | Msa1342960 | 0.835865 | 1.308244e-56 | -8.615850e-47 |
| Msa1273620 | Msa1342960 | 0.853185 | 2.823558e-61 | -8.615850e-47 |
| Msa1300370 | Msa1342960 | 0.800780 | 1.227200e-48 | -8.615850e-47 |
| Msa1305970 | Msa1342960 | 0.813050 | 3.114111e-51 | -8.615850e-47 |
| Msa1311600 | Msa1342960 | 0.841899 | 3.590589e-58 | -8.615850e-47 |
| Msa1329260 | Msa1342960 | 0.822347 | 2.486529e-53 | -8.615850e-47 |
| Msa1330540 | Msa1342960 | 0.821192 | 4.600225e-53 | -8.615850e-47 |
| Msa1331570 | Msa1342960 | 0.806353 | 8.570448e-50 | -8.615850e-47 |
| Msa1333220 | Msa1342960 | 0.849075 | 4.079339e-60 | -8.615850e-47 |
| Msa1342960 | Msa1348170 | 0.825894 | 3.654536e-54 | -8.615850e-47 |
| Msa1342960 | Msa1352600 | 0.827839 | 1.253659e-54 | -8.615850e-47 |
| Msa1342960 | Msa1356100 | 0.819487 | 1.131852e-52 | -8.615850e-47 |
| Msa1342960 | Msa1361670 | 0.859147 | 5.055833e-63 | -8.615850e-47 |
| Msa1342960 | Msa1364350 | 0.873795 | 1.114748e-67 | -8.615850e-47 |
| Msa1342960 | Msa1365030 | 0.826032 | 3.387818e-54 | -8.615850e-47 |
| Msa1342960 | Msa1367400 | 0.825483 | 4.572999e-54 | -8.615850e-47 |
| Msa1342960 | Msa1372770 | 0.838045 | 3.630282e-57 | -8.615850e-47 |
| Msa1342960 | Msa1373420 | 0.808251 | 3.394143e-50 | -8.615850e-47 |
| Msa1342960 | Msa1375610 | 0.842793 | 2.080943e-58 | -8.615850e-47 |
| Msa1342960 | Msa1376550 | 0.837069 | 6.459856e-57 | -8.615850e-47 |
| Msa1342960 | Msa1381340 | 0.809819 | 1.566720e-50 | -8.615850e-47 |
| Msa1342960 | Msa1382380 | 0.877678 | 5.183819e-69 | -8.615850e-47 |
| Msa1342960 | Msa1383620 | 0.813575 | 2.387817e-51 | -8.615850e-47 |
| Msa1342960 | Msa1383630 | -0.840455 | 8.607686e-58 | -8.615850e-47 |
| Msa1342960 | Msa1386910 | 0.810547 | 1.091593e-50 | -8.615850e-47 |
| Msa1342960 | Msa1387450 | 0.802425 | 5.644235e-49 | -8.615850e-47 |
| Msa1342960 | Msa1388030 | 0.868479 | 6.334880e-66 | -8.615850e-47 |
| Msa1342960 | Msa1388720 | 0.805649 | 1.205543e-49 | -8.615850e-47 |
| Msa1342960 | Msa1397560 | 0.802824 | 4.669292e-49 | -8.615850e-47 |
| Msa1342960 | Msa1407160 | 0.810210 | 1.291188e-50 | -8.615850e-47 |
| Msa1342960 | Msa1409360 | 0.809559 | 1.782497e-50 | -8.615850e-47 |
| Msa1342960 | Msa1410480 | 0.830691 | 2.546205e-55 | -8.615850e-47 |
| Msa1342960 | Msa1410500 | 0.815156 | 1.068111e-51 | -8.615850e-47 |
| Msa1342960 | Msa1415510 | 0.803283 | 3.753647e-49 | -8.615850e-47 |
| Msa1342960 | Msa1421520 | 0.802023 | 6.829657e-49 | -8.615850e-47 |
| Msa1342960 | Msa1428230 | 0.833101 | 6.472088e-56 | -8.615850e-47 |
| Msa1342960 | Msa1429380 | 0.815190 | 1.049695e-51 | -8.615850e-47 |
| Msa1342960 | Msa1431510 | 0.856414 | 3.268986e-62 | -8.615850e-47 |
| Msa1342960 | Msa1445910 | 0.813200 | 2.887180e-51 | -8.615850e-47 |
| Msa1342960 | Msa1451200 | 0.811442 | 6.988106e-51 | -8.615850e-47 |
| Msa1342960 | Msa1452230 | 0.807877 | 4.077226e-50 | -8.615850e-47 |
| Msa1342960 | Msa1457390 | 0.826578 | 2.512361e-54 | -8.615850e-47 |
| Msa1342960 | Msa1459130 | 0.824997 | 5.958835e-54 | -8.615850e-47 |
| Msa1342960 | Msa1462680 | 0.823812 | 1.132220e-53 | -8.615850e-47 |
| Msa0365210 | Msa1342960 | -0.803287 | 3.746826e-49 | -8.615850e-47 |
| Msa0368450 | Msa1342960 | 0.811404 | 7.121392e-51 | -8.615850e-47 |
| Msa0370580 | Msa1342960 | 0.820296 | 7.394496e-53 | -8.615850e-47 |
| Msa0373120 | Msa1342960 | 0.802335 | 5.892287e-49 | -8.615850e-47 |
| Msa0375330 | Msa1342960 | 0.828875 | 7.048814e-55 | -8.615850e-47 |
| Msa0378440 | Msa1342960 | 0.803595 | 3.233870e-49 | -8.615850e-47 |
| Msa0380400 | Msa1342960 | 0.841973 | 3.432385e-58 | -8.615850e-47 |
| Msa0380450 | Msa1342960 | 0.821189 | 4.609460e-53 | -8.615850e-47 |
| Msa0382060 | Msa1342960 | 0.800654 | 1.302006e-48 | -8.615850e-47 |
| Msa0385930 | Msa1342960 | 0.869328 | 3.363235e-66 | -8.615850e-47 |
| Msa0389080 | Msa1342960 | 0.853413 | 2.429018e-61 | -8.615850e-47 |
| Msa0402070 | Msa1342960 | 0.806284 | 8.863408e-50 | -8.615850e-47 |
| Msa0403480 | Msa1342960 | 0.851553 | 8.235065e-61 | -8.615850e-47 |
| Msa0405470 | Msa1342960 | 0.814384 | 1.583759e-51 | -8.615850e-47 |
| Msa0405550 | Msa1342960 | 0.812366 | 4.395630e-51 | -8.615850e-47 |
| Msa0412580 | Msa1342960 | 0.815772 | 7.789877e-52 | -8.615850e-47 |
| Msa0415160 | Msa1342960 | 0.807715 | 4.414679e-50 | -8.615850e-47 |
| Msa0435130 | Msa1342960 | 0.830643 | 2.615859e-55 | -8.615850e-47 |
| Msa0436300 | Msa1342960 | 0.818754 | 1.661857e-52 | -8.615850e-47 |
| Msa0437820 | Msa1342960 | 0.808006 | 3.828558e-50 | -8.615850e-47 |
| Msa0438680 | Msa1342960 | 0.802629 | 5.123212e-49 | -8.615850e-47 |
| Msa0457560 | Msa1342960 | -0.807104 | 5.948929e-50 | -8.615850e-47 |
| Msa0461620 | Msa1342960 | 0.820506 | 6.617045e-53 | -8.615850e-47 |
| Msa0476170 | Msa1342960 | 0.838898 | 2.187468e-57 | -8.615850e-47 |
| Msa0476890 | Msa1342960 | 0.812129 | 4.950705e-51 | -8.615850e-47 |
| Msa0479760 | Msa1342960 | 0.872960 | 2.128041e-67 | -8.615850e-47 |
| Msa0982090 | Msa1342960 | 0.876833 | 1.019759e-68 | -8.615850e-47 |
| Msa1004410 | Msa1342960 | 0.819045 | 1.427179e-52 | -8.615850e-47 |
| Msa1039190 | Msa1342960 | 0.800109 | 1.681399e-48 | -8.615850e-47 |
| Msa1039440 | Msa1342960 | 0.846796 | 1.734248e-59 | -8.615850e-47 |
| Msa1073100 | Msa1342960 | 0.816056 | 6.730735e-52 | -8.615850e-47 |
| Msa1083620 | Msa1342960 | 0.819835 | 9.428046e-53 | -8.615850e-47 |
| Msa1084680 | Msa1342960 | 0.824648 | 7.201781e-54 | -8.615850e-47 |
| Msa1085610 | Msa1342960 | 0.886047 | 4.803649e-72 | -8.615850e-47 |
| Msa1086310 | Msa1342960 | 0.801693 | 7.984235e-49 | -8.615850e-47 |
| Msa1086320 | Msa1342960 | 0.821498 | 3.910729e-53 | -8.615850e-47 |
| Msa1086350 | Msa1342960 | 0.801691 | 7.991351e-49 | -8.615850e-47 |
| Msa1086490 | Msa1342960 | 0.835224 | 1.900416e-56 | -8.615850e-47 |
| Msa1086510 | Msa1342960 | 0.813517 | 2.459372e-51 | -8.615850e-47 |
| Msa1086670 | Msa1342960 | 0.833835 | 4.245419e-56 | -8.615850e-47 |
| Msa0253230 | Msa1342960 | 0.801843 | 7.435189e-49 | -8.615850e-47 |
| Msa0254470 | Msa1342960 | -0.824214 | 9.112202e-54 | -8.615850e-47 |
| Msa0260580 | Msa1342960 | 0.843836 | 1.096546e-58 | -8.615850e-47 |
| Msa0260640 | Msa1342960 | 0.831986 | 1.222954e-55 | -8.615850e-47 |
| Msa0261350 | Msa1342960 | 0.807425 | 5.086164e-50 | -8.615850e-47 |
| Msa0261660 | Msa1342960 | 0.821469 | 3.970579e-53 | -8.615850e-47 |
| Msa0262350 | Msa1342960 | 0.826180 | 3.124945e-54 | -8.615850e-47 |
| Msa0264580 | Msa1342960 | 0.823376 | 1.431883e-53 | -8.615850e-47 |
| Msa0267320 | Msa1342960 | 0.809410 | 1.918378e-50 | -8.615850e-47 |
| Msa0268210 | Msa1342960 | 0.829144 | 6.067272e-55 | -8.615850e-47 |
| Msa0268450 | Msa1342960 | 0.843752 | 1.155234e-58 | -8.615850e-47 |
| Msa0268670 | Msa1342960 | 0.839671 | 1.378433e-57 | -8.615850e-47 |
| Msa0268880 | Msa1342960 | 0.837295 | 5.655245e-57 | -8.615850e-47 |
| Msa0269090 | Msa1342960 | 0.821248 | 4.466177e-53 | -8.615850e-47 |
| Msa0293070 | Msa1342960 | 0.803055 | 4.183876e-49 | -8.615850e-47 |
| Msa0293720 | Msa1342960 | -0.820562 | 6.423136e-53 | -8.615850e-47 |
| Msa0295030 | Msa1342960 | 0.833186 | 6.162048e-56 | -8.615850e-47 |
| Msa0299530 | Msa1342960 | 0.826070 | 3.318479e-54 | -8.615850e-47 |
| Msa0300130 | Msa1342960 | 0.807450 | 5.025463e-50 | -8.615850e-47 |
| Msa0302300 | Msa1342960 | 0.802529 | 5.373635e-49 | -8.615850e-47 |
| Msa0310720 | Msa1342960 | 0.839715 | 1.342252e-57 | -8.615850e-47 |
| Msa0310730 | Msa1342960 | 0.852060 | 5.911904e-61 | -8.615850e-47 |
| Msa0326170 | Msa1342960 | 0.833965 | 3.939245e-56 | -8.615850e-47 |
| Msa0331070 | Msa1342960 | 0.805401 | 1.358733e-49 | -8.615850e-47 |
| Msa0332190 | Msa1342960 | -0.813410 | 2.595805e-51 | -8.615850e-47 |
| Msa0332200 | Msa1342960 | -0.801549 | 8.544918e-49 | -8.615850e-47 |
| Msa0334450 | Msa1342960 | 0.832400 | 9.658473e-56 | -8.615850e-47 |
| Msa0339970 | Msa1342960 | 0.823589 | 1.276830e-53 | -8.615850e-47 |
| Msa0340700 | Msa1342960 | 0.811127 | 8.178654e-51 | -8.615850e-47 |
| Msa0355080 | Msa1342960 | 0.814293 | 1.658753e-51 | -8.615850e-47 |
| Msa1117770 | Msa1342960 | 0.805488 | 1.302909e-49 | -8.615850e-47 |
| Msa1121720 | Msa1342960 | 0.818653 | 1.751714e-52 | -8.615850e-47 |
| Msa1123490 | Msa1342960 | 0.801113 | 1.049486e-48 | -8.615850e-47 |
| Msa1128610 | Msa1342960 | 0.859389 | 4.278071e-63 | -8.615850e-47 |
| Msa1129120 | Msa1342960 | 0.807567 | 4.746866e-50 | -8.615850e-47 |
| Msa1129300 | Msa1342960 | 0.848893 | 4.584824e-60 | -8.615850e-47 |
| Msa1132900 | Msa1342960 | 0.842009 | 3.359493e-58 | -8.615850e-47 |
| Msa1143370 | Msa1342960 | 0.826030 | 3.392492e-54 | -8.615850e-47 |
| Msa1156120 | Msa1342960 | 0.826869 | 2.141062e-54 | -8.615850e-47 |
| Msa1190100 | Msa1342960 | 0.808992 | 2.358042e-50 | -8.615850e-47 |
| Msa1197740 | Msa1342960 | 0.814791 | 1.287205e-51 | -8.615850e-47 |
| Msa1199540 | Msa1342960 | 0.811170 | 8.005667e-51 | -8.615850e-47 |
| Msa1206400 | Msa1342960 | 0.815464 | 9.120502e-52 | -8.615850e-47 |
| Msa1206450 | Msa1342960 | 0.817255 | 3.625071e-52 | -8.615850e-47 |
| Msa1207920 | Msa1342960 | 0.838036 | 3.649290e-57 | -8.615850e-47 |
| Msa1209870 | Msa1342960 | 0.809570 | 1.772532e-50 | -8.615850e-47 |
| Msa1212150 | Msa1342960 | 0.811729 | 6.052537e-51 | -8.615850e-47 |
| Msa1212210 | Msa1342960 | 0.806527 | 7.876836e-50 | -8.615850e-47 |
| Msa1219530 | Msa1342960 | 0.813259 | 2.802069e-51 | -8.615850e-47 |
| Msa0483970 | Msa1342960 | 0.803984 | 2.684769e-49 | -8.615850e-47 |
| Msa0493180 | Msa1342960 | 0.812991 | 3.208284e-51 | -8.615850e-47 |
| Msa0500610 | Msa1342960 | 0.811311 | 7.461002e-51 | -8.615850e-47 |
| Msa0507960 | Msa1342960 | 0.800505 | 1.396912e-48 | -8.615850e-47 |
| Msa0523420 | Msa1342960 | 0.845865 | 3.110210e-59 | -8.615850e-47 |
| Msa0523430 | Msa1342960 | 0.900827 | 4.962088e-78 | -8.615850e-47 |
| Msa0523490 | Msa1342960 | 0.898567 | 4.674898e-77 | -8.615850e-47 |
| Msa0536350 | Msa1342960 | -0.828492 | 8.722249e-55 | -8.615850e-47 |
| Msa0548650 | Msa1342960 | 0.835266 | 1.855054e-56 | -8.615850e-47 |
| Msa0550980 | Msa1342960 | 0.805696 | 1.178439e-49 | -8.615850e-47 |
| Msa0550990 | Msa1342960 | 0.839797 | 1.277983e-57 | -8.615850e-47 |
| Msa0557440 | Msa1342960 | 0.811425 | 7.045558e-51 | -8.615850e-47 |
| Msa0559450 | Msa1342960 | 0.815481 | 9.044307e-52 | -8.615850e-47 |
| Msa0565370 | Msa1342960 | 0.810490 | 1.123010e-50 | -8.615850e-47 |
| Msa0566940 | Msa1342960 | 0.847578 | 1.058352e-59 | -8.615850e-47 |
| Msa0576020 | Msa1342960 | 0.880666 | 4.546896e-70 | -8.615850e-47 |
| Msa0576080 | Msa1342960 | 0.876542 | 1.285754e-68 | -8.615850e-47 |
| Msa0576090 | Msa1342960 | 0.807099 | 5.963621e-50 | -8.615850e-47 |
| Msa0576120 | Msa1342960 | 0.899187 | 2.540545e-77 | -8.615850e-47 |
| Msa0582560 | Msa1342960 | 0.804553 | 2.043920e-49 | -8.615850e-47 |
| Msa0582860 | Msa1342960 | 0.813644 | 2.306389e-51 | -8.615850e-47 |
| Msa0588110 | Msa1342960 | 0.801914 | 7.191273e-49 | -8.615850e-47 |
| Msa0590620 | Msa1342960 | 0.827108 | 1.876749e-54 | -8.615850e-47 |
| Msa0592330 | Msa1342960 | -0.828897 | 6.963973e-55 | -8.615850e-47 |
| Msa0862480 | Msa1342960 | 0.870233 | 1.703275e-66 | -8.615850e-47 |
| Msa0864820 | Msa1342960 | 0.846040 | 2.787425e-59 | -8.615850e-47 |
| Msa0866060 | Msa1342960 | 0.807822 | 4.189360e-50 | -8.615850e-47 |
| Msa0868050 | Msa1342960 | 0.810578 | 1.075301e-50 | -8.615850e-47 |
| Msa0869320 | Msa1342960 | 0.812452 | 4.210291e-51 | -8.615850e-47 |
| Msa0869420 | Msa1342960 | 0.810131 | 1.342362e-50 | -8.615850e-47 |
| Msa0870460 | Msa1342960 | 0.802336 | 5.888769e-49 | -8.615850e-47 |
| Msa0881530 | Msa1342960 | 0.870126 | 1.846423e-66 | -8.615850e-47 |
| Msa0919120 | Msa1342960 | 0.873375 | 1.543344e-67 | -8.615850e-47 |
| Msa0924840 | Msa1342960 | 0.817919 | 2.569042e-52 | -8.615850e-47 |
| Msa0925030 | Msa1342960 | 0.822123 | 2.803251e-53 | -8.615850e-47 |
| Msa0931000 | Msa1342960 | 0.828107 | 1.080218e-54 | -8.615850e-47 |
| Msa0945160 | Msa1342960 | 0.801074 | 1.068978e-48 | -8.615850e-47 |
| Msa0956600 | Msa1342960 | 0.801474 | 8.850975e-49 | -8.615850e-47 |
| Msa0966580 | Msa1342960 | -0.801501 | 8.741199e-49 | -8.615850e-47 |
| Msa0967170 | Msa1342960 | -0.803752 | 3.000906e-49 | -8.615850e-47 |
| Msa0971690 | Msa1342960 | 0.816687 | 4.864150e-52 | -8.615850e-47 |
| Msa0971780 | Msa1342960 | 0.810258 | 1.260632e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1342960 | MtrunA17_Chr4g0037131 | 99.640 | 278 | 1 | 0 | 2 | 279 | 10 | 287 | 0.0 | 570 |
| Msa1342960 | MtrunA17_Chr5g0405731 | 71.739 | 276 | 73 | 1 | 2 | 277 | 9 | 279 | 1.27e-150 | 422 |
| Msa1342960 | MtrunA17_Chr4g0030171 | 64.706 | 238 | 83 | 1 | 2 | 238 | 11 | 248 | 3.60e-110 | 318 |
| Msa1342960 | MtrunA17_Chr3g0124821 | 49.237 | 262 | 106 | 6 | 6 | 240 | 100 | 361 | 7.28e-78 | 241 |
| Msa1342960 | MtrunA17_Chr3g0137751 | 38.017 | 242 | 126 | 7 | 5 | 236 | 87 | 314 | 2.04e-43 | 150 |
| Msa1342960 | MtrunA17_Chr4g0068621 | 28.090 | 267 | 132 | 10 | 24 | 241 | 69 | 324 | 3.35e-16 | 77.4 |
| Msa1342960 | MtrunA17_Chr7g0225221 | 28.226 | 248 | 135 | 8 | 28 | 236 | 60 | 303 | 1.37e-15 | 75.5 |
| Msa1342960 | MtrunA17_Chr3g0129051 | 25.591 | 254 | 133 | 9 | 27 | 235 | 62 | 304 | 4.41e-15 | 73.9 |
| Msa1342960 | MtrunA17_Chr4g0072091 | 28.102 | 274 | 142 | 10 | 24 | 250 | 55 | 320 | 8.65e-15 | 73.2 |
| Msa1342960 | MtrunA17_Chr5g0426581 | 28.846 | 260 | 109 | 8 | 16 | 236 | 109 | 331 | 9.16e-15 | 73.6 |
| Msa1342960 | MtrunA17_Chr1g0188431 | 29.771 | 262 | 130 | 11 | 15 | 235 | 61 | 309 | 9.27e-15 | 73.2 |
| Msa1342960 | MtrunA17_Chr4g0053871 | 26.374 | 273 | 150 | 9 | 24 | 252 | 58 | 323 | 5.63e-14 | 70.9 |
| Msa1342960 | MtrunA17_Chr3g0129061 | 26.857 | 175 | 90 | 5 | 95 | 235 | 134 | 304 | 1.31e-12 | 67.0 |
| Msa1342960 | MtrunA17_Chr4g0013181 | 27.344 | 256 | 126 | 9 | 27 | 235 | 93 | 335 | 2.03e-12 | 66.6 |
| Msa1342960 | MtrunA17_Chr7g0254201 | 26.316 | 247 | 140 | 9 | 27 | 236 | 54 | 295 | 2.41e-12 | 66.2 |
| Msa1342960 | MtrunA17_Chr2g0278671 | 31.288 | 163 | 93 | 6 | 6 | 156 | 35 | 190 | 4.99e-12 | 65.1 |
| Msa1342960 | MtrunA17_Chr5g0432331 | 27.344 | 256 | 128 | 9 | 27 | 235 | 90 | 334 | 8.54e-12 | 64.7 |
| Msa1342960 | MtrunA17_Chr3g0106921 | 25.197 | 254 | 133 | 7 | 27 | 234 | 59 | 301 | 1.21e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1342960 | AT4G35000.1 | 79.211 | 279 | 57 | 1 | 2 | 279 | 9 | 287 | 1.17e-157 | 441 |
| Msa1342960 | AT4G35970.1 | 66.547 | 278 | 87 | 2 | 2 | 279 | 8 | 279 | 9.73e-133 | 377 |
| Msa1342960 | AT4G35970.2 | 71.163 | 215 | 61 | 1 | 2 | 216 | 8 | 221 | 3.40e-111 | 320 |
| Msa1342960 | AT3G09640.2 | 62.447 | 237 | 89 | 0 | 2 | 238 | 12 | 248 | 1.42e-106 | 310 |
| Msa1342960 | AT3G09640.1 | 62.447 | 237 | 89 | 0 | 2 | 238 | 12 | 248 | 1.42e-106 | 310 |
| Msa1342960 | AT1G07890.2 | 60.924 | 238 | 92 | 1 | 2 | 238 | 11 | 248 | 1.51e-103 | 302 |
| Msa1342960 | AT1G07890.8 | 60.924 | 238 | 92 | 1 | 2 | 238 | 11 | 248 | 1.51e-103 | 302 |
| Msa1342960 | AT1G07890.4 | 60.924 | 238 | 92 | 1 | 2 | 238 | 11 | 248 | 1.51e-103 | 302 |
| Msa1342960 | AT1G07890.7 | 60.924 | 238 | 92 | 1 | 2 | 238 | 11 | 248 | 1.51e-103 | 302 |
| Msa1342960 | AT1G07890.1 | 60.924 | 238 | 92 | 1 | 2 | 238 | 11 | 248 | 1.51e-103 | 302 |
| Msa1342960 | AT1G07890.3 | 60.924 | 238 | 92 | 1 | 2 | 238 | 11 | 248 | 1.51e-103 | 302 |
| Msa1342960 | AT1G07890.5 | 60.924 | 238 | 92 | 1 | 2 | 238 | 11 | 248 | 1.51e-103 | 302 |
| Msa1342960 | AT1G07890.6 | 60.338 | 237 | 93 | 1 | 2 | 237 | 11 | 247 | 2.04e-102 | 299 |
| Msa1342960 | AT4G08390.3 | 48.047 | 256 | 108 | 4 | 6 | 236 | 105 | 360 | 2.18e-76 | 237 |
| Msa1342960 | AT4G08390.2 | 48.047 | 256 | 108 | 4 | 6 | 236 | 106 | 361 | 2.61e-76 | 237 |
| Msa1342960 | AT4G08390.5 | 48.047 | 256 | 108 | 4 | 6 | 236 | 106 | 361 | 2.61e-76 | 237 |
| Msa1342960 | AT4G08390.1 | 48.047 | 256 | 108 | 4 | 6 | 236 | 106 | 361 | 2.61e-76 | 237 |
| Msa1342960 | AT1G77490.2 | 48.828 | 256 | 106 | 4 | 6 | 236 | 85 | 340 | 1.33e-75 | 236 |
| Msa1342960 | AT1G77490.1 | 48.828 | 256 | 106 | 4 | 6 | 236 | 85 | 340 | 1.64e-75 | 236 |
| Msa1342960 | AT4G08390.4 | 44.141 | 256 | 92 | 5 | 6 | 236 | 106 | 335 | 2.19e-65 | 208 |
| Msa1342960 | AT4G32320.1 | 39.035 | 228 | 118 | 5 | 18 | 236 | 108 | 323 | 1.26e-41 | 146 |
| Msa1342960 | AT2G24800.1 | 32.308 | 195 | 90 | 4 | 82 | 236 | 120 | 312 | 5.99e-18 | 82.8 |
| Msa1342960 | AT4G31760.1 | 31.443 | 194 | 92 | 5 | 82 | 236 | 118 | 309 | 3.24e-17 | 80.5 |
| Msa1342960 | AT3G28200.1 | 30.890 | 191 | 90 | 4 | 82 | 236 | 115 | 299 | 1.84e-16 | 78.2 |
| Msa1342960 | AT4G09010.2 | 29.412 | 272 | 111 | 10 | 25 | 254 | 49 | 281 | 1.26e-15 | 75.5 |
| Msa1342960 | AT4G30170.1 | 27.626 | 257 | 136 | 7 | 24 | 236 | 58 | 308 | 1.38e-15 | 75.9 |
| Msa1342960 | AT4G09010.1 | 29.412 | 272 | 111 | 10 | 25 | 254 | 114 | 346 | 2.72e-15 | 75.5 |
| Msa1342960 | AT4G09010.3 | 29.412 | 272 | 111 | 10 | 25 | 254 | 161 | 393 | 5.21e-15 | 74.7 |
| Msa1342960 | AT5G17820.1 | 26.502 | 283 | 136 | 10 | 3 | 232 | 29 | 292 | 1.91e-14 | 72.4 |
| Msa1342960 | AT5G14130.1 | 26.667 | 255 | 141 | 7 | 24 | 236 | 63 | 313 | 6.17e-14 | 71.2 |
| Msa1342960 | AT5G17820.2 | 26.502 | 283 | 136 | 10 | 3 | 232 | 82 | 345 | 7.06e-14 | 71.2 |
| Msa1342960 | AT5G14130.2 | 26.667 | 255 | 141 | 7 | 24 | 236 | 104 | 354 | 9.67e-14 | 70.9 |
| Msa1342960 | AT4G33420.1 | 32.124 | 193 | 97 | 8 | 73 | 235 | 119 | 307 | 3.11e-13 | 69.3 |
| Msa1342960 | AT4G33420.2 | 32.124 | 193 | 97 | 8 | 73 | 235 | 166 | 354 | 3.33e-13 | 69.3 |
| Msa1342960 | AT4G37530.1 | 26.592 | 267 | 140 | 7 | 25 | 242 | 59 | 318 | 5.54e-13 | 68.6 |
| Msa1342960 | AT1G44970.1 | 26.953 | 256 | 134 | 10 | 27 | 235 | 79 | 328 | 6.19e-13 | 68.6 |
| Msa1342960 | AT4G37520.1 | 26.038 | 265 | 146 | 7 | 25 | 243 | 59 | 319 | 1.91e-12 | 67.0 |
| Msa1342960 | AT2G18980.1 | 27.692 | 260 | 132 | 9 | 24 | 236 | 56 | 306 | 2.81e-12 | 66.2 |
| Msa1342960 | AT1G14550.1 | 27.037 | 270 | 151 | 10 | 7 | 235 | 39 | 303 | 5.58e-12 | 65.5 |
| Msa1342960 | AT4G37530.2 | 34.459 | 148 | 81 | 4 | 25 | 159 | 59 | 203 | 3.46e-11 | 62.8 |
| Msa1342960 | AT1G14540.1 | 25.735 | 272 | 151 | 10 | 7 | 235 | 34 | 297 | 6.36e-11 | 62.4 |
Find 92 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGTTGCAGTTGAGGTTAC+TGG | 0.120093 | tig0006056:-227276 | Msa1342960:CDS |
| TCCAACAGACAGGGCTTTAT+TGG | 0.192934 | tig0006056:-226459 | Msa1342960:CDS |
| GATCTTCAAGAGAAAGTAAA+TGG | 0.217985 | tig0006056:+225356 | None:intergenic |
| CCTTTGTGCTTCCAGCTTGC+GGG | 0.246744 | tig0006056:-227300 | Msa1342960:intron |
| TTGCTACATTCTACATCTAT+TGG | 0.258623 | tig0006056:-225464 | Msa1342960:three_prime_UTR |
| GTTATGATGCTGCTCATAAT+TGG | 0.266600 | tig0006056:+225407 | None:intergenic |
| TCAACATAACGGCGAAATTC+AGG | 0.286433 | tig0006056:+226431 | None:intergenic |
| TGTCAATATCAGGATACTTT+TGG | 0.287568 | tig0006056:-226510 | Msa1342960:intron |
| CCCACAGTCAACTTTGTTCC+TGG | 0.312965 | tig0006056:-227249 | Msa1342960:CDS |
| GTACTGGCACAAAGCGCTTT+TGG | 0.320365 | tig0006056:-225665 | Msa1342960:CDS |
| TTGTTGCAGTTGAGGTTACT+GGG | 0.345113 | tig0006056:-227275 | Msa1342960:CDS |
| GGTAAATAATCACCTGATAA+AGG | 0.356498 | tig0006056:+228831 | None:intergenic |
| GAACCCAATACTGCTCGTTA+TGG | 0.374494 | tig0006056:+225532 | None:intergenic |
| AGGTCTGCATATGAGATCTT+AGG | 0.374897 | tig0006056:+228851 | None:intergenic |
| GCACAACATACCCTTCTTCC+AGG | 0.375359 | tig0006056:+227231 | None:intergenic |
| AAAGATATTGTTGCACTGTC+TGG | 0.377559 | tig0006056:-226859 | Msa1342960:CDS |
| CTCATATGCAGACCTTTATC+AGG | 0.378885 | tig0006056:-228843 | Msa1342960:intron |
| TGCTACATTCTACATCTATT+GGG | 0.389003 | tig0006056:-225463 | Msa1342960:three_prime_UTR |
| AACCCAATACTGCTCGTTAT+GGG | 0.400077 | tig0006056:+225533 | None:intergenic |
| CATAAGAAACTTTCAGAGCT+TGG | 0.401756 | tig0006056:-225731 | Msa1342960:CDS |
| TTTGATCTGTTCAGCTCTGT+TGG | 0.414035 | tig0006056:-225573 | Msa1342960:three_prime_UTR |
| ACCATTAGGTCCACCGGTCT+TGG | 0.414832 | tig0006056:+229106 | None:intergenic |
| CCATCAAACCCGGATCTCTC+TGG | 0.417971 | tig0006056:+226732 | None:intergenic |
| CCAGAGAGATCCGGGTTTGA+TGG | 0.424242 | tig0006056:-226732 | Msa1342960:CDS |
| TCGTTCCGAATAGAACCATT+AGG | 0.431324 | tig0006056:+229092 | None:intergenic |
| GGCCCATAACGAGCAGTATT+GGG | 0.433144 | tig0006056:-225535 | Msa1342960:three_prime_UTR |
| ATCAGGAAGCCGCCCATCTC+TGG | 0.443990 | tig0006056:+227122 | None:intergenic |
| TCAACTTTGTTCCTGGAAGA+AGG | 0.444361 | tig0006056:-227242 | Msa1342960:CDS |
| AAGATATTGTTGCACTGTCT+GGG | 0.448168 | tig0006056:-226858 | Msa1342960:CDS |
| GGAGCAGTTGCCTTTGAGCT+TGG | 0.449217 | tig0006056:+225701 | None:intergenic |
| TGATTCAGGTGGCACGATGC+TGG | 0.451069 | tig0006056:-229146 | Msa1342960:intron |
| CGACAGGATTATTGATCATC+GGG | 0.451924 | tig0006056:+225230 | None:intergenic |
| ACCAAGACCGGTGGACCTAA+TGG | 0.457462 | tig0006056:-229107 | Msa1342960:CDS |
| TCCAATAAAGCCCTGTCTGT+TGG | 0.463470 | tig0006056:+226458 | None:intergenic |
| GCCAGTACGGTTGCATCCAC+AGG | 0.465545 | tig0006056:+225680 | None:intergenic |
| AACACACCTTGTTTAGCATC+AGG | 0.470481 | tig0006056:+227105 | None:intergenic |
| TGCTTAAACTTCCAACAGAC+AGG | 0.474376 | tig0006056:-226469 | Msa1342960:CDS |
| TTTCTCTTGAAGATCGGAAA+AGG | 0.477637 | tig0006056:-225348 | Msa1342960:three_prime_UTR |
| ATTTACTTTCTCTTGAAGAT+CGG | 0.485075 | tig0006056:-225354 | Msa1342960:three_prime_UTR |
| AGAGCACATCCAGAGAGATC+CGG | 0.490027 | tig0006056:-226741 | Msa1342960:CDS |
| GATCCGGGTTTGATGGCCCT+TGG | 0.490119 | tig0006056:-226725 | Msa1342960:CDS |
| GCCGCTGCAGTGGTGATCCT+CGG | 0.490613 | tig0006056:-225632 | Msa1342960:CDS |
| TCAAAAGTATGTACCAGAGA+TGG | 0.493165 | tig0006056:-227135 | Msa1342960:CDS |
| TCCTGTGGATGCAACCGTAC+TGG | 0.493313 | tig0006056:-225681 | Msa1342960:CDS |
| GTGGACCTAATGGTTCTATT+CGG | 0.494846 | tig0006056:-229097 | Msa1342960:CDS |
| TGGCCCATAACGAGCAGTAT+TGG | 0.498931 | tig0006056:-225536 | Msa1342960:three_prime_UTR |
| CTCAAAGGCAACTGCTCCTG+TGG | 0.511925 | tig0006056:-225696 | Msa1342960:CDS |
| TTCAGAGGGTCCTCTGTCCA+AGG | 0.512263 | tig0006056:+226708 | None:intergenic |
| GATACTAAGAAAACATAGAC+TGG | 0.514576 | tig0006056:+225497 | None:intergenic |
| GTTTGATGGCCCTTGGACAG+AGG | 0.519241 | tig0006056:-226718 | Msa1342960:CDS |
| GAGCACATCCAGAGAGATCC+GGG | 0.520069 | tig0006056:-226740 | Msa1342960:CDS |
| TGCGGGTGTTGTTGCAGTTG+AGG | 0.524490 | tig0006056:-227283 | Msa1342960:CDS |
| TTGTATGAAACTCACAAAAG+AGG | 0.531958 | tig0006056:-225605 | Msa1342960:CDS |
| TTCTGTTGGCGATGAGAGCA+CGG | 0.540281 | tig0006056:+229313 | None:intergenic |
| TGTCCAAGGGCCATCAAACC+CGG | 0.543652 | tig0006056:+226722 | None:intergenic |
| ATCTTCAAGAGAAAGTAAAT+GGG | 0.544266 | tig0006056:+225357 | None:intergenic |
| CAACTTTGTTCCTGGAAGAA+GGG | 0.545120 | tig0006056:-227241 | Msa1342960:intron |
| CAAAAGTATGTACCAGAGAT+GGG | 0.549843 | tig0006056:-227134 | Msa1342960:CDS |
| TGTATGAAACTCACAAAAGA+GGG | 0.552331 | tig0006056:-225604 | Msa1342960:CDS |
| GAGGGGAGCACAGTTTCTGT+TGG | 0.557155 | tig0006056:+229299 | None:intergenic |
| TATGAGTTATCAAACTTCAG+AGG | 0.559558 | tig0006056:+226693 | None:intergenic |
| TGGCTTTGCACCAAGCTCAA+AGG | 0.560692 | tig0006056:-225711 | Msa1342960:CDS |
| ACGACAGGATTATTGATCAT+CGG | 0.568417 | tig0006056:+225229 | None:intergenic |
| AAAAGCGCTTTGTGCCAGTA+CGG | 0.571570 | tig0006056:+225667 | None:intergenic |
| GTTAACAATGGAGTATCTCA+AGG | 0.574436 | tig0006056:-229361 | None:intergenic |
| CGGCTTCCTGATGCTAAACA+AGG | 0.575592 | tig0006056:-227111 | Msa1342960:intron |
| TATGATGCAAAGACCAAGAC+CGG | 0.589691 | tig0006056:-229119 | Msa1342960:CDS |
| AATAGAACCATTAGGTCCAC+CGG | 0.593542 | tig0006056:+229100 | None:intergenic |
| TACGCTAAGCGAAGCATGAG+GGG | 0.595394 | tig0006056:+229282 | None:intergenic |
| ATGAGTTATCAAACTTCAGA+GGG | 0.599283 | tig0006056:+226694 | None:intergenic |
| CTCTTGAAGATCGGAAAAGG+AGG | 0.601669 | tig0006056:-225345 | Msa1342960:three_prime_UTR |
| ACTGTCTGGGGCACATACGC+TGG | 0.608033 | tig0006056:-226845 | Msa1342960:intron |
| CCATACGATAAAAGATATCA+CGG | 0.612766 | tig0006056:+226893 | None:intergenic |
| TCGCATACAGCTCAACATAA+CGG | 0.615688 | tig0006056:+226420 | None:intergenic |
| TCAGAGGGTCCTCTGTCCAA+GGG | 0.622882 | tig0006056:+226709 | None:intergenic |
| CCAGGAACAAAGTTGACTGT+GGG | 0.625811 | tig0006056:+227249 | None:intergenic |
| TTACGCTAAGCGAAGCATGA+GGG | 0.626450 | tig0006056:+229281 | None:intergenic |
| ACCGAGGATCACCACTGCAG+CGG | 0.626779 | tig0006056:+225631 | None:intergenic |
| TCCAGGAACAAAGTTGACTG+TGG | 0.628167 | tig0006056:+227248 | None:intergenic |
| AGATATTGTTGCACTGTCTG+GGG | 0.639389 | tig0006056:-226857 | Msa1342960:CDS |
| TTATGTTGAGCTGTATGCGA+AGG | 0.641815 | tig0006056:-226417 | Msa1342960:intron |
| TGTTGCAGTTGAGGTTACTG+GGG | 0.642422 | tig0006056:-227274 | Msa1342960:CDS |
| TGTCGTCACAGAGGAAGTGA+AGG | 0.644307 | tig0006056:-228882 | Msa1342960:intron |
| CTTACGCTAAGCGAAGCATG+AGG | 0.649786 | tig0006056:+229280 | None:intergenic |
| AGTTGTAGCTGCCGCTGCAG+TGG | 0.652303 | tig0006056:-225642 | Msa1342960:CDS |
| GCTTAAACTTCCAACAGACA+GGG | 0.655046 | tig0006056:-226468 | Msa1342960:CDS |
| GTTGCAGTTGAGGTTACTGG+GGG | 0.656351 | tig0006056:-227273 | Msa1342960:CDS |
| TGTTGGATGTCACGTCTGTG+TGG | 0.663043 | tig0006056:-225556 | Msa1342960:three_prime_UTR |
| TAATGGTTCTATTCGGAACG+AGG | 0.677025 | tig0006056:-229090 | Msa1342960:CDS |
| GAGTTTCATACAAGTAACCG+AGG | 0.700364 | tig0006056:+225615 | None:intergenic |
| GATGCAAAGACCAAGACCGG+TGG | 0.716515 | tig0006056:-229116 | Msa1342960:CDS |
| AAGTATGTACCAGAGATGGG+CGG | 0.726843 | tig0006056:-227131 | Msa1342960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATAAAAATAAAATATT+GGG | + | tig0006056:228004-228023 | None:intergenic | 0.0% |
| !! | AAAAAATAAAAATAAAATAT+TGG | + | tig0006056:228005-228024 | None:intergenic | 0.0% |
| !!! | TTATTTTTTAATTTTTATTT+TGG | - | tig0006056:228016-228035 | Msa1342960:intron | 0.0% |
| !! | AATAATAAAAAGATATAGAA+AGG | + | tig0006056:227775-227794 | None:intergenic | 10.0% |
| !! | GAAAATAAAATAAGAATTTA+TGG | + | tig0006056:227812-227831 | None:intergenic | 10.0% |
| !!! | AGATTCATTTAATTTAATAA+TGG | + | tig0006056:228747-228766 | None:intergenic | 10.0% |
| !! | TTTCATAACTATCAAAATTT+AGG | + | tig0006056:226850-226869 | None:intergenic | 15.0% |
| !! | TACTATATATGAAAATCAAA+CGG | + | tig0006056:226985-227004 | None:intergenic | 15.0% |
| !!! | TTTTTTTGTTAATCTGATTC+AGG | - | tig0006056:225427-225446 | Msa1342960:three_prime_UTR | 20.0% |
| !! | TAGTATGAATATCATATCAT+TGG | - | tig0006056:225651-225670 | Msa1342960:CDS | 20.0% |
| !! | TAGAAGACAATTTCTTAAAA+AGG | + | tig0006056:226369-226388 | None:intergenic | 20.0% |
| !! | ATTATATTATGCCTTGAATT+AGG | - | tig0006056:226503-226522 | Msa1342960:intron | 20.0% |
| !! | ACATATAAAGTGATTAAATC+CGG | - | tig0006056:227117-227136 | Msa1342960:CDS | 20.0% |
| !! | ATAACTAATATTGTAACGAA+AGG | + | tig0006056:227386-227405 | None:intergenic | 20.0% |
| !!! | ATTTTATTTTCTGTGTTTCA+AGG | - | tig0006056:227821-227840 | Msa1342960:intron | 20.0% |
| !!! | TTTTATTTTCTGTGTTTCAA+GGG | - | tig0006056:227822-227841 | Msa1342960:intron | 20.0% |
| !! | ATATTGACAAAGATATTTAG+CGG | + | tig0006056:228066-228085 | None:intergenic | 20.0% |
| !! | TAAATATCTTTGTCAATATC+AGG | - | tig0006056:228067-228086 | Msa1342960:intron | 20.0% |
| !!! | TTTTTAGCAAAACAGAAAAT+TGG | + | tig0006056:228668-228687 | None:intergenic | 20.0% |
| ! | TCTTATGTTCGATAATTTCA+CGG | - | tig0006056:225391-225410 | Msa1342960:three_prime_UTR | 25.0% |
| !!! | AAGAAAGCTATTGATTTTTG+CGG | - | tig0006056:225552-225571 | Msa1342960:three_prime_UTR | 25.0% |
| ! | AAACAAGAAAACTCTTAGAA+AGG | + | tig0006056:225680-225699 | None:intergenic | 25.0% |
| ! | TTTGCTAGAAATTGTAGAAT+GGG | - | tig0006056:225835-225854 | Msa1342960:intron | 25.0% |
| ! | AAAAAGGTAAACAAGAACAA+GGG | + | tig0006056:226353-226372 | None:intergenic | 25.0% |
| ! | TAAAAAGGTAAACAAGAACA+AGG | + | tig0006056:226354-226373 | None:intergenic | 25.0% |
| ! | TGTTCTATTCAATCATTTAC+AGG | - | tig0006056:226411-226430 | Msa1342960:intron | 25.0% |
| ! | GAAATAAAGAGTTCAGAAAA+TGG | + | tig0006056:226597-226616 | None:intergenic | 25.0% |
| !! | AAAATTTGTTTAAGGGAACA+AGG | + | tig0006056:226688-226707 | None:intergenic | 25.0% |
| !! | TTGTTCCCTTAAACAAATTT+TGG | - | tig0006056:226687-226706 | Msa1342960:CDS | 25.0% |
| ! | TGAAATAGAACTACATTTCT+TGG | - | tig0006056:226788-226807 | Msa1342960:intron | 25.0% |
| ! | GACACTTACAAAGTAATTAA+GGG | + | tig0006056:227058-227077 | None:intergenic | 25.0% |
| ! | AGACACTTACAAAGTAATTA+AGG | + | tig0006056:227059-227078 | None:intergenic | 25.0% |
| ! | AATTATTTATCACTCATGCA+GGG | - | tig0006056:227169-227188 | Msa1342960:intron | 25.0% |
| !!! | TGCATATCTTGTTTTATACA+AGG | + | tig0006056:227199-227218 | None:intergenic | 25.0% |
| !! | TGTTTCTAAATTATTGTCAG+TGG | - | tig0006056:227501-227520 | Msa1342960:intron | 25.0% |
| !! | CTTAATTTTGTTGATGTGTA+GGG | + | tig0006056:227602-227621 | None:intergenic | 25.0% |
| !! | TCTTAATTTTGTTGATGTGT+AGG | + | tig0006056:227603-227622 | None:intergenic | 25.0% |
| ! | TATAAACATGTCAATGCTAT+TGG | - | tig0006056:227655-227674 | Msa1342960:intron | 25.0% |
| !!! | AATTTTTTTGCTTTACTACG+AGG | - | tig0006056:227952-227971 | Msa1342960:intron | 25.0% |
| ! | ATGGACTTATAAAATGCTAT+TGG | + | tig0006056:228281-228300 | None:intergenic | 25.0% |
| !! | TATTGGATCAATCTTTTGAT+TGG | - | tig0006056:228323-228342 | Msa1342960:intron | 25.0% |
| ! | ATATTAAGTAAGAAAGCTGT+TGG | + | tig0006056:228481-228500 | None:intergenic | 25.0% |
| ! | CGTATTAACTATTAAGTAGT+TGG | + | tig0006056:228532-228551 | None:intergenic | 25.0% |
| ! | CTACTTAATAGTTAATACGT+TGG | - | tig0006056:228533-228552 | Msa1342960:intron | 25.0% |
| ! | TCCTTATGTTACAACTATTA+AGG | - | tig0006056:228564-228583 | Msa1342960:intron | 25.0% |
| ! | ACCTTAATAGTTGTAACATA+AGG | + | tig0006056:228568-228587 | None:intergenic | 25.0% |
| !! | AAAATTGGCATGAATGTTTT+GGG | + | tig0006056:228653-228672 | None:intergenic | 25.0% |
| ! | TAATCGAAGAAAATCAATAG+TGG | - | tig0006056:228689-228708 | Msa1342960:intron | 25.0% |
| ! | ATCTTCAAGAGAAAGTAAAT+GGG | + | tig0006056:229233-229252 | None:intergenic | 25.0% |
| ! | ATTTACTTTCTCTTGAAGAT+CGG | - | tig0006056:229233-229252 | Msa1342960:intron | 25.0% |
| ! | TTTTGTTAATCTGATTCAGG+TGG | - | tig0006056:225430-225449 | Msa1342960:three_prime_UTR | 30.0% |
| !! | TTTTCTCATGGTGCTAATAA+TGG | - | tig0006056:225525-225544 | Msa1342960:three_prime_UTR | 30.0% |
| GGTAAATAATCACCTGATAA+AGG | + | tig0006056:225759-225778 | None:intergenic | 30.0% | |
| TTTACATAACAAGTGAGTGA+AGG | + | tig0006056:225780-225799 | None:intergenic | 30.0% | |
| ! | TCAATAATTTTGTGCTCAAG+TGG | - | tig0006056:225812-225831 | Msa1342960:intron | 30.0% |
| ! | GTTTGCTAGAAATTGTAGAA+TGG | - | tig0006056:225834-225853 | Msa1342960:intron | 30.0% |
| TTGCTAGAAATTGTAGAATG+GGG | - | tig0006056:225836-225855 | Msa1342960:intron | 30.0% | |
| GTCACAAACAATGTATAAAG+AGG | + | tig0006056:225988-226007 | None:intergenic | 30.0% | |
| TTATACATTGTTTGTGACTC+TGG | - | tig0006056:225990-226009 | Msa1342960:intron | 30.0% | |
| TGAAACTGAATCTCGTTATT+AGG | - | tig0006056:226099-226118 | Msa1342960:intron | 30.0% | |
| TATTCAATCATTTACAGGCT+TGG | - | tig0006056:226416-226435 | Msa1342960:intron | 30.0% | |
| ! | ACACAAAGTATTACAGCATT+AGG | + | tig0006056:226450-226469 | None:intergenic | 30.0% |
| TTATGCCTTGAATTAGGATA+AGG | - | tig0006056:226509-226528 | Msa1342960:intron | 30.0% | |
| AATCACCTTATCCTAATTCA+AGG | + | tig0006056:226517-226536 | None:intergenic | 30.0% | |
| TTCTGTGATAAACCATTTGA+AGG | - | tig0006056:226538-226557 | Msa1342960:intron | 30.0% | |
| TCTGTGATAAACCATTTGAA+GGG | - | tig0006056:226539-226558 | Msa1342960:intron | 30.0% | |
| ! | CGTTGCCAAAATTTGTTTAA+GGG | + | tig0006056:226695-226714 | None:intergenic | 30.0% |
| ! | ACGTTGCCAAAATTTGTTTA+AGG | + | tig0006056:226696-226715 | None:intergenic | 30.0% |
| TTACATGTATCCAAACTTAG+TGG | - | tig0006056:226932-226951 | Msa1342960:intron | 30.0% | |
| CTCTCTATTTCAATATGTAC+CGG | + | tig0006056:227139-227158 | None:intergenic | 30.0% | |
| ACATATTGAAATAGAGAGGA+AGG | - | tig0006056:227141-227160 | Msa1342960:CDS | 30.0% | |
| GAATTATTTATCACTCATGC+AGG | - | tig0006056:227168-227187 | Msa1342960:intron | 30.0% | |
| AATTAGAGAATGACAAGTTC+AGG | + | tig0006056:227414-227433 | None:intergenic | 30.0% | |
| ! | TCTAATTTTCTGTGTCATGT+AGG | - | tig0006056:227427-227446 | Msa1342960:intron | 30.0% |
| AGAAAAGAAAATCCTTTCAC+AGG | + | tig0006056:227572-227591 | None:intergenic | 30.0% | |
| CCATACGATAAAAGATATCA+CGG | + | tig0006056:227697-227716 | None:intergenic | 30.0% | |
| ! | CGTGATATCTTTTATCGTAT+GGG | - | tig0006056:227695-227714 | Msa1342960:intron | 30.0% |
| !! | TTTATTATTTGCTGTGATCG+CGG | - | tig0006056:227786-227805 | Msa1342960:intron | 30.0% |
| ATGAGTTATCAAACTTCAGA+GGG | + | tig0006056:227896-227915 | None:intergenic | 30.0% | |
| TATGAGTTATCAAACTTCAG+AGG | + | tig0006056:227897-227916 | None:intergenic | 30.0% | |
| ! | TGTCAATATCAGGATACTTT+TGG | - | tig0006056:228077-228096 | Msa1342960:intron | 30.0% |
| ! | TATGAAATCAGTTTTCAGCA+GGG | + | tig0006056:228234-228253 | None:intergenic | 30.0% |
| ! | TTATGAAATCAGTTTTCAGC+AGG | + | tig0006056:228235-228254 | None:intergenic | 30.0% |
| ! | ATAAAGTGTTCTGCCAAATA+TGG | - | tig0006056:228251-228270 | Msa1342960:intron | 30.0% |
| ! | TAAAGTGTTCTGCCAAATAT+GGG | - | tig0006056:228252-228271 | Msa1342960:intron | 30.0% |
| ! | AAATGCAACAAGAGTACAAA+TGG | + | tig0006056:228300-228319 | None:intergenic | 30.0% |
| CTCTTGTTGCATTTGTTTAT+TGG | - | tig0006056:228306-228325 | Msa1342960:intron | 30.0% | |
| !! | CATTAAGTAGGTTGATTAGT+AGG | - | tig0006056:228355-228374 | Msa1342960:intron | 30.0% |
| ATTTCCTACATGTGCTAATT+GGG | - | tig0006056:228447-228466 | Msa1342960:intron | 30.0% | |
| ! | GAAAATTGGCATGAATGTTT+TGG | + | tig0006056:228654-228673 | None:intergenic | 30.0% |
| TTGTATGAAACTCACAAAAG+AGG | - | tig0006056:228982-229001 | Msa1342960:intron | 30.0% | |
| TGTATGAAACTCACAAAAGA+GGG | - | tig0006056:228983-229002 | Msa1342960:intron | 30.0% | |
| GATACTAAGAAAACATAGAC+TGG | + | tig0006056:229093-229112 | None:intergenic | 30.0% | |
| TTGCTACATTCTACATCTAT+TGG | - | tig0006056:229123-229142 | Msa1342960:CDS | 30.0% | |
| TGCTACATTCTACATCTATT+GGG | - | tig0006056:229124-229143 | Msa1342960:CDS | 30.0% | |
| GATCTTCAAGAGAAAGTAAA+TGG | + | tig0006056:229234-229253 | None:intergenic | 30.0% | |
| ! | TTTTTCCTTCCTTCCGATTT+CGG | - | tig0006056:225366-225385 | Msa1342960:three_prime_UTR | 35.0% |
| CGAACATAAGAAACCGAAAT+CGG | + | tig0006056:225382-225401 | None:intergenic | 35.0% | |
| !! | GGACAATTTAAGTTGCAAGT+CGG | + | tig0006056:225967-225986 | None:intergenic | 35.0% |
| AACTGAATCTCGTTATTAGG+TGG | - | tig0006056:226102-226121 | Msa1342960:intron | 35.0% | |
| TCTGAATTGTCATGCATCAT+GGG | + | tig0006056:226206-226225 | None:intergenic | 35.0% | |
| TTCTGAATTGTCATGCATCA+TGG | + | tig0006056:226207-226226 | None:intergenic | 35.0% | |
| TCTTCTACCCAAAGACAAAA+AGG | - | tig0006056:226382-226401 | Msa1342960:intron | 35.0% | |
| CTTCTACCCAAAGACAAAAA+GGG | - | tig0006056:226383-226402 | Msa1342960:intron | 35.0% | |
| ! | AACCATCCCTTTTTGTCTTT+GGG | + | tig0006056:226392-226411 | None:intergenic | 35.0% |
| ATGCTGTAATACTTTGTGTG+AGG | - | tig0006056:226451-226470 | Msa1342960:CDS | 35.0% | |
| ATACTTTGTGTGAGGTTTCA+AGG | - | tig0006056:226459-226478 | Msa1342960:CDS | 35.0% | |
| ! | GGTTTTTGACAAAGTTGTCA+AGG | - | tig0006056:226480-226499 | Msa1342960:CDS | 35.0% |
| CTGTGATAAACCATTTGAAG+GGG | - | tig0006056:226540-226559 | Msa1342960:intron | 35.0% | |
| TGTGATAAACCATTTGAAGG+GGG | - | tig0006056:226541-226560 | Msa1342960:intron | 35.0% | |
| !!! | ATTAGTTTTCCCCCTTCAAA+TGG | + | tig0006056:226553-226572 | None:intergenic | 35.0% |
| ! | CAGTGTCATTGAAATGATTG+AGG | + | tig0006056:226723-226742 | None:intergenic | 35.0% |
| ! | ATCACGTTTTTGCCTAAGAA+AGG | + | tig0006056:226769-226788 | None:intergenic | 35.0% |
| !! | CTTGGTAGCTTTATGAAATC+TGG | - | tig0006056:226806-226825 | Msa1342960:intron | 35.0% |
| GAGATATTAGCCACTAAGTT+TGG | + | tig0006056:226945-226964 | None:intergenic | 35.0% | |
| ATCAGAATCAAGACAGTGAT+CGG | - | tig0006056:227079-227098 | Msa1342960:intron | 35.0% | |
| CGGTACATATTGAAATAGAG+AGG | - | tig0006056:227137-227156 | Msa1342960:CDS | 35.0% | |
| TATTGAAATAGAGAGGAAGG+AGG | - | tig0006056:227144-227163 | Msa1342960:intron | 35.0% | |
| ! | TCAAAAGTATGTACCAGAGA+TGG | - | tig0006056:227452-227471 | Msa1342960:intron | 35.0% |
| ! | CAAAAGTATGTACCAGAGAT+GGG | - | tig0006056:227453-227472 | Msa1342960:intron | 35.0% |
| TACAACAGTTTCGTTCACTT+GGG | - | tig0006056:227524-227543 | Msa1342960:intron | 35.0% | |
| AACATGTCAATGCTATTGGT+AGG | - | tig0006056:227659-227678 | Msa1342960:intron | 35.0% | |
| ! | CCGTGATATCTTTTATCGTA+TGG | - | tig0006056:227694-227713 | Msa1342960:intron | 35.0% |
| AAAGATATTGTTGCACTGTC+TGG | - | tig0006056:227728-227747 | Msa1342960:intron | 35.0% | |
| AAGATATTGTTGCACTGTCT+GGG | - | tig0006056:227729-227748 | Msa1342960:intron | 35.0% | |
| TGCTATTGGAAACCCATATT+TGG | + | tig0006056:228267-228286 | None:intergenic | 35.0% | |
| TGGAACTCATTGCATTAAGT+AGG | - | tig0006056:228343-228362 | Msa1342960:intron | 35.0% | |
| GATTTCCTACATGTGCTAAT+TGG | - | tig0006056:228446-228465 | Msa1342960:intron | 35.0% | |
| TAACTATTAAGTAGTTGGCC+AGG | + | tig0006056:228527-228546 | None:intergenic | 35.0% | |
| TCTAATTCTAATTCTCCCTC+TGG | - | tig0006056:228794-228813 | Msa1342960:intron | 35.0% | |
| CATAAGAAACTTTCAGAGCT+TGG | - | tig0006056:228856-228875 | Msa1342960:CDS | 35.0% | |
| GTTATGATGCTGCTCATAAT+TGG | + | tig0006056:229183-229202 | None:intergenic | 35.0% | |
| TTTCTCTTGAAGATCGGAAA+AGG | - | tig0006056:229239-229258 | Msa1342960:intron | 35.0% | |
| CGGAAGGAAGGAAAAAAACA+AGG | + | tig0006056:225362-225381 | None:intergenic | 40.0% | |
| CATAAGAAACCGAAATCGGA+AGG | + | tig0006056:225378-225397 | None:intergenic | 40.0% | |
| TATGATGCAAAGACCAAGAC+CGG | - | tig0006056:225468-225487 | Msa1342960:three_prime_UTR | 40.0% | |
| AATAGAACCATTAGGTCCAC+CGG | + | tig0006056:225490-225509 | None:intergenic | 40.0% | |
| ! | GTGGACCTAATGGTTCTATT+CGG | - | tig0006056:225490-225509 | Msa1342960:three_prime_UTR | 40.0% |
| TCGTTCCGAATAGAACCATT+AGG | + | tig0006056:225498-225517 | None:intergenic | 40.0% | |
| ! | TAATGGTTCTATTCGGAACG+AGG | - | tig0006056:225497-225516 | Msa1342960:three_prime_UTR | 40.0% |
| ! | AACGAGGAAGAGTTTTCTCA+TGG | - | tig0006056:225513-225532 | Msa1342960:three_prime_UTR | 40.0% |
| ! | GTTTTCTTATGTCGTCACAG+AGG | - | tig0006056:225696-225715 | Msa1342960:CDS | 40.0% |
| AGGTCTGCATATGAGATCTT+AGG | + | tig0006056:225739-225758 | None:intergenic | 40.0% | |
| CTCATATGCAGACCTTTATC+AGG | - | tig0006056:225744-225763 | Msa1342960:CDS | 40.0% | |
| AAGTCGGAAGTAGCAGAAAT+AGG | + | tig0006056:225951-225970 | None:intergenic | 40.0% | |
| ACTCTGGACACTCAAAACTT+TGG | - | tig0006056:226006-226025 | Msa1342960:intron | 40.0% | |
| CTCTGGACACTCAAAACTTT+GGG | - | tig0006056:226007-226026 | Msa1342960:intron | 40.0% | |
| ! | AGGGCACTAATCTAAGCAAA+GGG | + | tig0006056:226162-226181 | None:intergenic | 40.0% |
| GAAAGAGCTTGTGTGTAACA+GGG | + | tig0006056:226181-226200 | None:intergenic | 40.0% | |
| TACCCAAAGACAAAAAGGGA+TGG | - | tig0006056:226387-226406 | Msa1342960:intron | 40.0% | |
| ! | CAACCATCCCTTTTTGTCTT+TGG | + | tig0006056:226393-226412 | None:intergenic | 40.0% |
| GTCATTGAAATGATTGAGGC+AGG | + | tig0006056:226719-226738 | None:intergenic | 40.0% | |
| ACTACCAACAAGCCTTTCTT+AGG | - | tig0006056:226754-226773 | Msa1342960:intron | 40.0% | |
| TTTGCCTAAGAAAGGCTTGT+TGG | + | tig0006056:226761-226780 | None:intergenic | 40.0% | |
| TTGTTGCAGTTGAGGTTACT+GGG | - | tig0006056:227312-227331 | Msa1342960:intron | 40.0% | |
| TCAACTTTGTTCCTGGAAGA+AGG | - | tig0006056:227345-227364 | Msa1342960:intron | 40.0% | |
| CAACTTTGTTCCTGGAAGAA+GGG | - | tig0006056:227346-227365 | Msa1342960:intron | 40.0% | |
| ! | AACACACCTTGTTTAGCATC+AGG | + | tig0006056:227485-227504 | None:intergenic | 40.0% |
| GTACAACAGTTTCGTTCACT+TGG | - | tig0006056:227523-227542 | Msa1342960:intron | 40.0% | |
| AGATATTGTTGCACTGTCTG+GGG | - | tig0006056:227730-227749 | Msa1342960:intron | 40.0% | |
| TGCTTAAACTTCCAACAGAC+AGG | - | tig0006056:228118-228137 | Msa1342960:intron | 40.0% | |
| GCTTAAACTTCCAACAGACA+GGG | - | tig0006056:228119-228138 | Msa1342960:intron | 40.0% | |
| TCAACATAACGGCGAAATTC+AGG | + | tig0006056:228159-228178 | None:intergenic | 40.0% | |
| TCGCATACAGCTCAACATAA+CGG | + | tig0006056:228170-228189 | None:intergenic | 40.0% | |
| TTATGTTGAGCTGTATGCGA+AGG | - | tig0006056:228170-228189 | Msa1342960:intron | 40.0% | |
| AGCTGTATGCGAAGGTAATT+GGG | - | tig0006056:228178-228197 | Msa1342960:intron | 40.0% | |
| TCCAAAGCACAATGCTTACT+GGG | + | tig0006056:228386-228405 | None:intergenic | 40.0% | |
| AACATCGTGATAATCGCAGA+TGG | + | tig0006056:228420-228439 | None:intergenic | 40.0% | |
| AGATATGAGCTCTTTCTACC+TGG | - | tig0006056:228506-228525 | Msa1342960:intron | 40.0% | |
| !! | TTGGCATGAATGTTTTGGGT+AGG | + | tig0006056:228649-228668 | None:intergenic | 40.0% |
| GAGTTTCATACAAGTAACCG+AGG | + | tig0006056:228975-228994 | None:intergenic | 40.0% | |
| TTTGATCTGTTCAGCTCTGT+TGG | - | tig0006056:229014-229033 | Msa1342960:intron | 40.0% | |
| AACCCAATACTGCTCGTTAT+GGG | + | tig0006056:229057-229076 | None:intergenic | 40.0% | |
| TTACGCTAAGCGAAGCATGA+GGG | + | tig0006056:225309-225328 | None:intergenic | 45.0% | |
| TCATGCTTCGCTTAGCGTAA+GGG | - | tig0006056:225309-225328 | Msa1342960:three_prime_UTR | 45.0% | |
| AGAAACCGAAATCGGAAGGA+AGG | + | tig0006056:225374-225393 | None:intergenic | 45.0% | |
| ! | GTTTTTCGTGCAGTGTTAGC+TGG | - | tig0006056:226046-226065 | Msa1342960:intron | 45.0% |
| ! | CAGGGCACTAATCTAAGCAA+AGG | + | tig0006056:226163-226182 | None:intergenic | 45.0% |
| GGAAAGAGCTTGTGTGTAAC+AGG | + | tig0006056:226182-226201 | None:intergenic | 45.0% | |
| GAATTGTCATGCATCATGGG+AGG | + | tig0006056:226203-226222 | None:intergenic | 45.0% | |
| !! | GCTTGTTGGTAGTATGAAGC+AGG | + | tig0006056:226747-226766 | None:intergenic | 45.0% |
| CATGTAATCTATGACGCAGC+TGG | + | tig0006056:227242-227261 | None:intergenic | 45.0% | |
| GTTGTTGCAGTTGAGGTTAC+TGG | - | tig0006056:227311-227330 | Msa1342960:intron | 45.0% | |
| TGTTGCAGTTGAGGTTACTG+GGG | - | tig0006056:227313-227332 | Msa1342960:intron | 45.0% | |
| CCAGGAACAAAGTTGACTGT+GGG | + | tig0006056:227341-227360 | None:intergenic | 45.0% | |
| TCCAGGAACAAAGTTGACTG+TGG | + | tig0006056:227342-227361 | None:intergenic | 45.0% | |
| AAGTATGTACCAGAGATGGG+CGG | - | tig0006056:227456-227475 | Msa1342960:intron | 45.0% | |
| GAAAATCCTTTCACAGGCAG+TGG | + | tig0006056:227566-227585 | None:intergenic | 45.0% | |
| ! | TCCAACAGACAGGGCTTTAT+TGG | - | tig0006056:228128-228147 | Msa1342960:intron | 45.0% |
| TCCAATAAAGCCCTGTCTGT+TGG | + | tig0006056:228132-228151 | None:intergenic | 45.0% | |
| GAGCTGTATGCGAAGGTAAT+TGG | - | tig0006056:228177-228196 | Msa1342960:intron | 45.0% | |
| AAGCACAATGCTTACTGGGA+AGG | + | tig0006056:228382-228401 | None:intergenic | 45.0% | |
| ! | TCCCAGTAAGCATTGTGCTT+TGG | - | tig0006056:228382-228401 | Msa1342960:intron | 45.0% |
| CTCCAAAGCACAATGCTTAC+TGG | + | tig0006056:228387-228406 | None:intergenic | 45.0% | |
| TCCTACATGTGCTAATTGGG+TGG | - | tig0006056:228450-228469 | Msa1342960:intron | 45.0% | |
| TCCACCCAATTAGCACATGT+AGG | + | tig0006056:228454-228473 | None:intergenic | 45.0% | |
| ATTCTAATTCTCCCTCTGGC+AGG | - | tig0006056:228798-228817 | Msa1342960:intron | 45.0% | |
| !! | AAAAGCGCTTTGTGCCAGTA+CGG | + | tig0006056:228923-228942 | None:intergenic | 45.0% |
| GAACCCAATACTGCTCGTTA+TGG | + | tig0006056:229058-229077 | None:intergenic | 45.0% | |
| CTCTTGAAGATCGGAAAAGG+AGG | - | tig0006056:229242-229261 | Msa1342960:intron | 45.0% | |
| TTCTGTTGGCGATGAGAGCA+CGG | + | tig0006056:225277-225296 | None:intergenic | 50.0% | |
| TACGCTAAGCGAAGCATGAG+GGG | + | tig0006056:225308-225327 | None:intergenic | 50.0% | |
| CTTACGCTAAGCGAAGCATG+AGG | + | tig0006056:225310-225329 | None:intergenic | 50.0% | |
| CTCATGCTTCGCTTAGCGTA+AGG | - | tig0006056:225308-225327 | Msa1342960:three_prime_UTR | 50.0% | |
| TGTCGTCACAGAGGAAGTGA+AGG | - | tig0006056:225705-225724 | Msa1342960:CDS | 50.0% | |
| ! | CAAGCTGGAAGCACAAAGGA+AGG | + | tig0006056:227286-227305 | None:intergenic | 50.0% |
| TCCTTTGTGCTTCCAGCTTG+CGG | - | tig0006056:227286-227305 | Msa1342960:CDS | 50.0% | |
| GTTGCAGTTGAGGTTACTGG+GGG | - | tig0006056:227314-227333 | Msa1342960:intron | 50.0% | |
| CCCACAGTCAACTTTGTTCC+TGG | - | tig0006056:227338-227357 | Msa1342960:intron | 50.0% | |
| GCACAACATACCCTTCTTCC+AGG | + | tig0006056:227359-227378 | None:intergenic | 50.0% | |
| CGGCTTCCTGATGCTAAACA+AGG | - | tig0006056:227476-227495 | Msa1342960:intron | 50.0% | |
| CAGTTTCGTTCACTTGGGCA+TGG | - | tig0006056:227529-227548 | Msa1342960:intron | 50.0% | |
| AGCTTACCACTGCCTGTGAA+AGG | - | tig0006056:227557-227576 | Msa1342960:intron | 50.0% | |
| AGAGCACATCCAGAGAGATC+CGG | - | tig0006056:227846-227865 | Msa1342960:intron | 50.0% | |
| ! | TGGCTTTGCACCAAGCTCAA+AGG | - | tig0006056:228876-228895 | Msa1342960:intron | 50.0% |
| !! | GTACTGGCACAAAGCGCTTT+TGG | - | tig0006056:228922-228941 | Msa1342960:intron | 50.0% |
| TGTTGGATGTCACGTCTGTG+TGG | - | tig0006056:229031-229050 | Msa1342960:intron | 50.0% | |
| TGGCCCATAACGAGCAGTAT+TGG | - | tig0006056:229051-229070 | Msa1342960:CDS | 50.0% | |
| GGCCCATAACGAGCAGTATT+GGG | - | tig0006056:229052-229071 | Msa1342960:CDS | 50.0% | |
| ! | GAGGGGAGCACAGTTTCTGT+TGG | + | tig0006056:225291-225310 | None:intergenic | 55.0% |
| TGATTCAGGTGGCACGATGC+TGG | - | tig0006056:225441-225460 | Msa1342960:three_prime_UTR | 55.0% | |
| GATGCAAAGACCAAGACCGG+TGG | - | tig0006056:225471-225490 | Msa1342960:three_prime_UTR | 55.0% | |
| ACCAAGACCGGTGGACCTAA+TGG | - | tig0006056:225480-225499 | Msa1342960:three_prime_UTR | 55.0% | |
| ACCATTAGGTCCACCGGTCT+TGG | + | tig0006056:225484-225503 | None:intergenic | 55.0% | |
| CCTTTGTGCTTCCAGCTTGC+GGG | - | tig0006056:227287-227306 | Msa1342960:CDS | 55.0% | |
| !! | TGCGGGTGTTGTTGCAGTTG+AGG | - | tig0006056:227304-227323 | Msa1342960:intron | 55.0% |
| GAGCACATCCAGAGAGATCC+GGG | - | tig0006056:227847-227866 | Msa1342960:intron | 55.0% | |
| CCATCAAACCCGGATCTCTC+TGG | + | tig0006056:227858-227877 | None:intergenic | 55.0% | |
| CCAGAGAGATCCGGGTTTGA+TGG | - | tig0006056:227855-227874 | Msa1342960:intron | 55.0% | |
| TGTCCAAGGGCCATCAAACC+CGG | + | tig0006056:227868-227887 | None:intergenic | 55.0% | |
| ! | GTTTGATGGCCCTTGGACAG+AGG | - | tig0006056:227869-227888 | Msa1342960:intron | 55.0% |
| TCAGAGGGTCCTCTGTCCAA+GGG | + | tig0006056:227881-227900 | None:intergenic | 55.0% | |
| TTCAGAGGGTCCTCTGTCCA+AGG | + | tig0006056:227882-227901 | None:intergenic | 55.0% | |
| ATTCTCCCTCTGGCAGGATG+AGG | - | tig0006056:228804-228823 | Msa1342960:intron | 55.0% | |
| TGCATCCTCATCCTGCCAGA+GGG | + | tig0006056:228812-228831 | None:intergenic | 55.0% | |
| ATGCATCCTCATCCTGCCAG+AGG | + | tig0006056:228813-228832 | None:intergenic | 55.0% | |
| GGAGCAGTTGCCTTTGAGCT+TGG | + | tig0006056:228889-228908 | None:intergenic | 55.0% | |
| CTCAAAGGCAACTGCTCCTG+TGG | - | tig0006056:228891-228910 | Msa1342960:intron | 55.0% | |
| TCCTGTGGATGCAACCGTAC+TGG | - | tig0006056:228906-228925 | Msa1342960:intron | 55.0% | |
| ! | CCCGCAAGCTGGAAGCACAA+AGG | + | tig0006056:227290-227309 | None:intergenic | 60.0% |
| CTGCAACAACACCCGCAAGC+TGG | + | tig0006056:227301-227320 | None:intergenic | 60.0% | |
| ATCAGGAAGCCGCCCATCTC+TGG | + | tig0006056:227468-227487 | None:intergenic | 60.0% | |
| ! | ACTGTCTGGGGCACATACGC+TGG | - | tig0006056:227742-227761 | Msa1342960:intron | 60.0% |
| ! | GATCCGGGTTTGATGGCCCT+TGG | - | tig0006056:227862-227881 | Msa1342960:intron | 60.0% |
| GCCAGTACGGTTGCATCCAC+AGG | + | tig0006056:228910-228929 | None:intergenic | 60.0% | |
| AGTTGTAGCTGCCGCTGCAG+TGG | - | tig0006056:228945-228964 | Msa1342960:intron | 60.0% | |
| ACCGAGGATCACCACTGCAG+CGG | + | tig0006056:228959-228978 | None:intergenic | 60.0% | |
| GCCGCTGCAGTGGTGATCCT+CGG | - | tig0006056:228955-228974 | Msa1342960:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0006056 | gene | 225233 | 229376 | 225233 | ID=Msa1342960;Name=Msa1342960 |
| tig0006056 | mRNA | 225233 | 229376 | 225233 | ID=Msa1342960-mRNA-1;Parent=Msa1342960;Name=Msa1342960-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|1|0.88|1|1|1|9|365|279 |
| tig0006056 | exon | 225233 | 225789 | 225233 | ID=Msa1342960-mRNA-1:exon:3880;Parent=Msa1342960-mRNA-1 |
| tig0006056 | exon | 226418 | 226520 | 226418 | ID=Msa1342960-mRNA-1:exon:3879;Parent=Msa1342960-mRNA-1 |
| tig0006056 | exon | 226687 | 226766 | 226687 | ID=Msa1342960-mRNA-1:exon:3878;Parent=Msa1342960-mRNA-1 |
| tig0006056 | exon | 226846 | 226928 | 226846 | ID=Msa1342960-mRNA-1:exon:3877;Parent=Msa1342960-mRNA-1 |
| tig0006056 | exon | 227112 | 227160 | 227112 | ID=Msa1342960-mRNA-1:exon:3876;Parent=Msa1342960-mRNA-1 |
| tig0006056 | exon | 227242 | 227307 | 227242 | ID=Msa1342960-mRNA-1:exon:3875;Parent=Msa1342960-mRNA-1 |
| tig0006056 | exon | 228844 | 228893 | 228844 | ID=Msa1342960-mRNA-1:exon:3874;Parent=Msa1342960-mRNA-1 |
| tig0006056 | exon | 229036 | 229160 | 229036 | ID=Msa1342960-mRNA-1:exon:3873;Parent=Msa1342960-mRNA-1 |
| tig0006056 | exon | 229285 | 229376 | 229285 | ID=Msa1342960-mRNA-1:exon:3872;Parent=Msa1342960-mRNA-1 |
| tig0006056 | CDS | 229285 | 229376 | 229285 | ID=Msa1342960-mRNA-1:cds;Parent=Msa1342960-mRNA-1 |
| tig0006056 | CDS | 229036 | 229160 | 229036 | ID=Msa1342960-mRNA-1:cds;Parent=Msa1342960-mRNA-1 |
| tig0006056 | CDS | 228844 | 228893 | 228844 | ID=Msa1342960-mRNA-1:cds;Parent=Msa1342960-mRNA-1 |
| tig0006056 | CDS | 227242 | 227307 | 227242 | ID=Msa1342960-mRNA-1:cds;Parent=Msa1342960-mRNA-1 |
| tig0006056 | CDS | 227112 | 227160 | 227112 | ID=Msa1342960-mRNA-1:cds;Parent=Msa1342960-mRNA-1 |
| tig0006056 | CDS | 226846 | 226928 | 226846 | ID=Msa1342960-mRNA-1:cds;Parent=Msa1342960-mRNA-1 |
| tig0006056 | CDS | 226687 | 226766 | 226687 | ID=Msa1342960-mRNA-1:cds;Parent=Msa1342960-mRNA-1 |
| tig0006056 | CDS | 226418 | 226520 | 226418 | ID=Msa1342960-mRNA-1:cds;Parent=Msa1342960-mRNA-1 |
| tig0006056 | CDS | 225598 | 225789 | 225598 | ID=Msa1342960-mRNA-1:cds;Parent=Msa1342960-mRNA-1 |
| tig0006056 | three_prime_UTR | 225233 | 225597 | 225233 | ID=Msa1342960-mRNA-1:three_prime_utr;Parent=Msa1342960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
