Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1330750 | XP_013457565.1 | 99.270 | 274 | 1 | 1 | 111 | 384 | 1 | 273 | 0.0 | 570 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1330750 | sp|P40228|CSK2B_ARATH | 75.601 | 291 | 50 | 4 | 111 | 384 | 1 | 287 | 5.41e-156 | 443 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1330750 | A0A072UQG1 | 99.270 | 274 | 1 | 1 | 111 | 384 | 1 | 273 | 0.0 | 570 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1256820 | Msa1330750 | 0.966626 | 3.581252e-126 | -8.615850e-47 |
| Msa1298000 | Msa1330750 | 0.959603 | 1.266028e-117 | -8.615850e-47 |
| Msa1206260 | Msa1330750 | 0.956395 | 3.263244e-114 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1330750 | MtrunA17_Chr4g0055361 | 97.445 | 274 | 1 | 2 | 111 | 384 | 1 | 268 | 0.0 | 552 |
| Msa1330750 | MtrunA17_Chr5g0399951 | 81.560 | 282 | 43 | 3 | 111 | 384 | 1 | 281 | 1.97e-167 | 469 |
| Msa1330750 | MtrunA17_Chr1g0153861 | 98.630 | 73 | 1 | 0 | 177 | 249 | 48 | 120 | 3.03e-45 | 152 |
| Msa1330750 | MtrunA17_Chr4g0055501 | 95.775 | 71 | 3 | 0 | 1 | 71 | 10 | 80 | 3.33e-36 | 140 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1330750 | AT5G47080.1 | 75.601 | 291 | 50 | 4 | 111 | 384 | 1 | 287 | 5.50e-157 | 443 |
| Msa1330750 | AT4G17640.1 | 75.874 | 286 | 53 | 5 | 111 | 384 | 1 | 282 | 3.18e-156 | 441 |
| Msa1330750 | AT2G44680.1 | 78.378 | 259 | 50 | 2 | 125 | 382 | 27 | 280 | 1.96e-153 | 434 |
| Msa1330750 | AT5G47080.4 | 74.227 | 291 | 49 | 5 | 111 | 384 | 1 | 282 | 6.80e-151 | 427 |
| Msa1330750 | AT2G44680.2 | 77.606 | 259 | 51 | 3 | 125 | 382 | 27 | 279 | 4.66e-150 | 426 |
| Msa1330750 | AT4G17640.2 | 74.476 | 286 | 52 | 6 | 111 | 384 | 1 | 277 | 5.47e-150 | 425 |
| Msa1330750 | AT3G60250.1 | 74.809 | 262 | 55 | 2 | 125 | 384 | 24 | 276 | 3.63e-143 | 408 |
| Msa1330750 | AT3G60250.2 | 74.046 | 262 | 56 | 3 | 125 | 384 | 24 | 275 | 1.26e-139 | 399 |
| Msa1330750 | AT5G47080.2 | 73.600 | 250 | 45 | 4 | 111 | 343 | 1 | 246 | 1.44e-126 | 365 |
| Msa1330750 | AT5G47080.3 | 73.684 | 247 | 47 | 4 | 111 | 343 | 1 | 243 | 1.06e-125 | 362 |
| Msa1330750 | AT2G44680.3 | 77.273 | 220 | 44 | 2 | 125 | 343 | 27 | 241 | 3.05e-123 | 356 |
| Msa1330750 | AT3G60250.3 | 72.398 | 221 | 50 | 2 | 125 | 343 | 24 | 235 | 5.38e-111 | 325 |
| Msa1330750 | AT4G17610.1 | 50.725 | 69 | 34 | 0 | 3 | 71 | 4 | 72 | 2.90e-13 | 72.0 |
| Msa1330750 | AT4G17610.3 | 50.725 | 69 | 34 | 0 | 3 | 71 | 4 | 72 | 3.09e-13 | 72.0 |
| Msa1330750 | AT4G17610.2 | 50.725 | 69 | 34 | 0 | 3 | 71 | 4 | 72 | 3.14e-13 | 72.0 |
Find 109 sgRNAs with CRISPR-Local
Find 469 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACATTGATGGAGCTTATTT+TGG | 0.142336 | 8_4:-49987014 | Msa1330750:CDS |
| TTGTTTATTGTAGGTAAAAT+TGG | 0.166521 | 8_4:-49990516 | Msa1330750:intron |
| TTATGCTCTTGATTTGATTT+TGG | 0.200069 | 8_4:-49988664 | Msa1330750:CDS |
| TCCAAAACTGCCAATATTTC+TGG | 0.210478 | 8_4:-49990133 | Msa1330750:intron |
| CACCAGACGGTGTCGTTTAT+TGG | 0.216815 | 8_4:+49992712 | None:intergenic |
| ACCAGAAATATTGGCAGTTT+TGG | 0.225014 | 8_4:+49990132 | None:intergenic |
| GTCTTGTTACAAATTGTATT+TGG | 0.226587 | 8_4:-49986631 | Msa1330750:three_prime_UTR |
| TATCAAGGAGGATGGTTCTT+TGG | 0.268796 | 8_4:-49992738 | Msa1330750:CDS |
| CAAGATGACTTCAACCTTTG+TGG | 0.289031 | 8_4:-49988714 | Msa1330750:CDS |
| TCGGCAGCAGAGATGCTTTA+TGG | 0.294830 | 8_4:-49988362 | Msa1330750:CDS |
| TTTGAGACACAGTGTGTGTT+AGG | 0.301732 | 8_4:+49990471 | None:intergenic |
| CTTTCGATCCTCCGATTTGT+TGG | 0.309378 | 8_4:+49990282 | None:intergenic |
| AGGAACTTGATCGAAGCTTT+TGG | 0.316524 | 8_4:+49993040 | None:intergenic |
| AGCTTAAACTTCCAGCTTCA+TGG | 0.333527 | 8_4:+49986888 | None:intergenic |
| ATTGGTTTCTCTCTCTTTGT+TGG | 0.347659 | 8_4:+49990186 | None:intergenic |
| GAAATGGGTACCAGAAATAT+TGG | 0.362437 | 8_4:+49990123 | None:intergenic |
| AAGGGGATCCTTGATGGTAT+TGG | 0.386002 | 8_4:+49990168 | None:intergenic |
| TTAAAACGGAAATGAGATAA+TGG | 0.387282 | 8_4:+49986546 | None:intergenic |
| TAAGCTTTCATGAAAGTAAG+AGG | 0.390464 | 8_4:-49986871 | Msa1330750:three_prime_UTR |
| ATATATCCTTCTACCTTAGC+TGG | 0.393064 | 8_4:+49990411 | None:intergenic |
| TGTTTATTGTAGGTAAAATT+GGG | 0.403706 | 8_4:-49990515 | Msa1330750:intron |
| CACCTCTTCTTGATGACATA+TGG | 0.412631 | 8_4:-49986978 | Msa1330750:CDS |
| CACAAAGGTTGAAGTCATCT+TGG | 0.419737 | 8_4:+49988715 | None:intergenic |
| AAGGATACTGCCTTGATACT+TGG | 0.428282 | 8_4:+49988053 | None:intergenic |
| TGACTCTGTCTAGACATTGA+TGG | 0.431052 | 8_4:-49987026 | Msa1330750:intron |
| TTGAAGAAGGGGATCCTTGA+TGG | 0.447132 | 8_4:+49990162 | None:intergenic |
| TCCACAAATTCAACTTAAAA+CGG | 0.452059 | 8_4:+49986532 | None:intergenic |
| TGCCCAAGAGTTTACTGCTC+TGG | 0.452889 | 8_4:-49988171 | Msa1330750:CDS |
| CGACTGACCAACTGGAAGAC+AGG | 0.459035 | 8_4:+49988143 | None:intergenic |
| GGAATGTCCGACTGACCAAC+TGG | 0.459318 | 8_4:+49988135 | None:intergenic |
| TGTCCAGAGCAGTAAACTCT+TGG | 0.459857 | 8_4:+49988168 | None:intergenic |
| GATTGCATTCTCGTTTCCAC+TGG | 0.462017 | 8_4:-49992993 | Msa1330750:CDS |
| TTCCAATAAACGACACCGTC+TGG | 0.464088 | 8_4:-49992714 | Msa1330750:intron |
| TTGGTCAGTCGGACATTCCT+AGG | 0.467923 | 8_4:-49988131 | Msa1330750:CDS |
| CGCTCCTAAAACAAGTAAAA+CGG | 0.469487 | 8_4:+49986758 | None:intergenic |
| AACTTCACAAGCCATGAAGC+TGG | 0.476442 | 8_4:-49986899 | Msa1330750:exon |
| CTCATTTAACTCTTCTGTTG+TGG | 0.480534 | 8_4:-49986838 | Msa1330750:three_prime_UTR |
| TCAAGAGCATAATCATAGTA+AGG | 0.480913 | 8_4:+49988675 | None:intergenic |
| AGTTCCTCCTTCCGCCGTCC+CGG | 0.484120 | 8_4:-49993024 | Msa1330750:CDS |
| TTAGCTGGGAAAATGCCTTT+CGG | 0.485073 | 8_4:+49990426 | None:intergenic |
| ACAAAACGAGTTAATTGAAT+CGG | 0.485282 | 8_4:-49988381 | Msa1330750:CDS |
| TCAACTTCGCGTCCCATCAA+TGG | 0.485312 | 8_4:-49990214 | Msa1330750:CDS |
| ACGAGGAAAATGATGGATGA+GGG | 0.492664 | 8_4:+49992944 | None:intergenic |
| AAGCAAAGGAATGGCTGCTA+TGG | 0.494974 | 8_4:-49988312 | Msa1330750:intron |
| GAAGCCGCAGAAACCAGCTC+AGG | 0.495797 | 8_4:-49986949 | Msa1330750:CDS |
| CTGATGGAGAGGACACATCT+TGG | 0.496739 | 8_4:-49988800 | Msa1330750:CDS |
| GTGAAGATCTTTATTATCCT+CGG | 0.499504 | 8_4:-49988077 | Msa1330750:CDS |
| CAGAAGAGTTAAATGAGATT+CGG | 0.501653 | 8_4:+49986844 | None:intergenic |
| CTTGGAACGTAGCCCTGAGC+TGG | 0.505575 | 8_4:+49986936 | None:intergenic |
| GTCTCAAATCTACAACCAAA+AGG | 0.506177 | 8_4:-49990456 | Msa1330750:CDS |
| AGCACCGCCGGGACGGCGGA+AGG | 0.507833 | 8_4:+49993017 | None:intergenic |
| TTGAGACACAGTGTGTGTTA+GGG | 0.508113 | 8_4:+49990472 | None:intergenic |
| AAGTACAAGAACTATGACTT+TGG | 0.513375 | 8_4:-49988198 | Msa1330750:CDS |
| AATTCAATGAGCAAGTGCTT+AGG | 0.513437 | 8_4:-49986675 | Msa1330750:three_prime_UTR |
| TGGTTCTGCCTCCAACAAAT+CGG | 0.517982 | 8_4:-49990293 | Msa1330750:CDS |
| TAATTTACAGGACATTATCA+AGG | 0.518405 | 8_4:-49992753 | Msa1330750:intron |
| AGGACACATCTTGGATCTCA+TGG | 0.519032 | 8_4:-49988791 | Msa1330750:CDS |
| AACGAGGAAAATGATGGATG+AGG | 0.520271 | 8_4:+49992943 | None:intergenic |
| TCGATCCTCCGATTTGTTGG+AGG | 0.523491 | 8_4:+49990285 | None:intergenic |
| GTCCAGAGCAGTAAACTCTT+GGG | 0.524198 | 8_4:+49988169 | None:intergenic |
| TGAGAAAACGAGGAAAATGA+TGG | 0.525817 | 8_4:+49992937 | None:intergenic |
| CAGGACATTATCAAGGAGGA+TGG | 0.530631 | 8_4:-49992746 | Msa1330750:CDS |
| AGAATGCAATCGAGCACCGC+CGG | 0.535619 | 8_4:+49993005 | None:intergenic |
| TTGGATGTTGAATCCTCTCA+TGG | 0.536194 | 8_4:-49988645 | Msa1330750:intron |
| TATCCTCGGTCCAAGTATCA+AGG | 0.539508 | 8_4:-49988063 | Msa1330750:CDS |
| TTGGAGGATCGTTGAAGAAG+GGG | 0.542487 | 8_4:+49990151 | None:intergenic |
| TTTGGAGGATCGTTGAAGAA+GGG | 0.542634 | 8_4:+49990150 | None:intergenic |
| GCAATCGAGCACCGCCGGGA+CGG | 0.545576 | 8_4:+49993010 | None:intergenic |
| TCGGATGTGAGTGGTTCTGA+TGG | 0.547426 | 8_4:-49988816 | Msa1330750:CDS |
| TTGATGGGACGCGAAGTTGA+AGG | 0.555193 | 8_4:+49990217 | None:intergenic |
| CATATTGACAAGCAAAGGAA+TGG | 0.559392 | 8_4:-49988321 | Msa1330750:CDS |
| GAATGCAATCGAGCACCGCC+GGG | 0.563629 | 8_4:+49993006 | None:intergenic |
| ATGAGGGAAGCGAGGAGCGA+CGG | 0.563894 | 8_4:+49992960 | None:intergenic |
| TAATAAAGATCTTCACACCT+AGG | 0.564469 | 8_4:+49988084 | None:intergenic |
| CTGTGAAAATATATTGCCCT+AGG | 0.570529 | 8_4:-49988101 | Msa1330750:CDS |
| ACCGCCGGGACGGCGGAAGG+AGG | 0.571445 | 8_4:+49993020 | None:intergenic |
| AGGGAAGCGAGGAGCGACGG+CGG | 0.573906 | 8_4:+49992963 | None:intergenic |
| GGACAACCCTGTCTTCCAGT+TGG | 0.581204 | 8_4:-49988150 | Msa1330750:CDS |
| TATATCCTTCTACCTTAGCT+GGG | 0.584299 | 8_4:+49990412 | None:intergenic |
| GAGAGAAACCAATACCATCA+AGG | 0.584389 | 8_4:-49990176 | Msa1330750:CDS |
| CATAATCATAGTAAGGCACT+TGG | 0.585754 | 8_4:+49988682 | None:intergenic |
| GTCCATATGTCATCAAGAAG+AGG | 0.586772 | 8_4:+49986976 | None:intergenic |
| TTGAAGCTGAAAGTGAAACT+AGG | 0.589169 | 8_4:+49986697 | None:intergenic |
| TTTGGATAACGAAGCAACGA+CGG | 0.591230 | 8_4:+49993058 | None:intergenic |
| GAAGGAAAGCTCACCATGAG+AGG | 0.595315 | 8_4:+49988632 | None:intergenic |
| CTGTCTTCCAGTTGGTCAGT+CGG | 0.596296 | 8_4:-49988142 | Msa1330750:CDS |
| CGTTACATATTGACAAGCAA+AGG | 0.597579 | 8_4:-49988326 | Msa1330750:CDS |
| AATAAAGATCTTCACACCTA+GGG | 0.602100 | 8_4:+49988085 | None:intergenic |
| TATGTCATCAAGAAGAGGTG+TGG | 0.608315 | 8_4:+49986981 | None:intergenic |
| TGAAACAGACAGTGAAGAGT+CGG | 0.609801 | 8_4:-49988835 | Msa1330750:CDS |
| TCCTCCTTCCGCCGTCCCGG+CGG | 0.611279 | 8_4:-49993021 | Msa1330750:CDS |
| TTGATCCGCTGAATGCTGCA+AGG | 0.612618 | 8_4:+49986811 | None:intergenic |
| GTACTCCTTGCAGCATTCAG+CGG | 0.625181 | 8_4:-49986816 | Msa1330750:three_prime_UTR |
| TAGCCCTGAGCTGGTTTCTG+CGG | 0.627243 | 8_4:+49986945 | None:intergenic |
| AAGCCGCAGAAACCAGCTCA+GGG | 0.638099 | 8_4:-49986948 | Msa1330750:CDS |
| GACTGACCAACTGGAAGACA+GGG | 0.638452 | 8_4:+49988144 | None:intergenic |
| AATGATGGATGAGGGAAGCG+AGG | 0.639093 | 8_4:+49992952 | None:intergenic |
| CTGCCTTGATACTTGGACCG+AGG | 0.643410 | 8_4:+49988060 | None:intergenic |
| AGTGAAGAGTCGGATGTGAG+TGG | 0.651799 | 8_4:-49988825 | Msa1330750:CDS |
| CCAAAAGGAAAATAGCCGAA+AGG | 0.654665 | 8_4:-49990441 | Msa1330750:CDS |
| AAAATGTACAAAGGTCGTGG+TGG | 0.670283 | 8_4:-49990313 | Msa1330750:CDS |
| CTTGGCTGCTCAATCCACAA+AGG | 0.670694 | 8_4:+49988700 | None:intergenic |
| TTCTGCCTCCAACAAATCGG+AGG | 0.672720 | 8_4:-49990290 | Msa1330750:CDS |
| TCATGGTTCTGCAATCTCAG+AGG | 0.675059 | 8_4:-49988774 | Msa1330750:CDS |
| CGACGGCGGAGACAAACCAG+TGG | 0.680945 | 8_4:+49992977 | None:intergenic |
| AATGATACCTTGAGAAAACG+AGG | 0.683434 | 8_4:+49992927 | None:intergenic |
| TGTGAGTGGTTCTGATGGAG+AGG | 0.687843 | 8_4:-49988811 | Msa1330750:CDS |
| TTTACAGGACATTATCAAGG+AGG | 0.692916 | 8_4:-49992750 | Msa1330750:intron |
| CATAGGTGATATGTTCACAG+AGG | 0.751923 | 8_4:-49988405 | Msa1330750:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATTATATTTTTTTTTAT+TGG | - | chr8_4:49988849-49988868 | Msa1330750:intron | 0.0% |
| !!! | ATATTATATTTTTTTTTATT+GGG | - | chr8_4:49988850-49988869 | Msa1330750:intron | 0.0% |
| !!! | TTTTTTTAATGTAACTTTAT+TGG | + | chr8_4:49987927-49987946 | None:intergenic | 10.0% |
| !!! | TGTATTTTATTTTAAGATTA+TGG | + | chr8_4:49988808-49988827 | None:intergenic | 10.0% |
| !!! | TAATTTTGTGATTTTTTTTT+GGG | - | chr8_4:49989564-49989583 | Msa1330750:intron | 10.0% |
| !! | TAATTAAGTTTGATTAATTT+AGG | - | chr8_4:49989663-49989682 | Msa1330750:intron | 10.0% |
| !! | AGAAAGAAAAAAAAAAAATT+GGG | + | chr8_4:49989807-49989826 | None:intergenic | 10.0% |
| !!! | AATTTTTTTTTTTTCTTTCT+GGG | - | chr8_4:49989807-49989826 | Msa1330750:intron | 10.0% |
| !!! | TATCATTTTTTTTTTTTGAA+TGG | + | chr8_4:49990416-49990435 | None:intergenic | 10.0% |
| !! | AAAATAAAAAATAACTGAAA+AGG | + | chr8_4:49991118-49991137 | None:intergenic | 10.0% |
| !!! | AGCTTTATATTGATTATTTT+TGG | - | chr8_4:49986772-49986791 | Msa1330750:three_prime_UTR | 15.0% |
| !! | AAATAAGATTTATGAGTAAT+AGG | - | chr8_4:49988097-49988116 | Msa1330750:CDS | 15.0% |
| !!! | TAATTGATTTGATGATAATT+TGG | + | chr8_4:49988472-49988491 | None:intergenic | 15.0% |
| !! | ATTTAATGTGATACTAAATA+TGG | + | chr8_4:49988763-49988782 | None:intergenic | 15.0% |
| !! | AAAATAATATAGTGCTAAAA+TGG | + | chr8_4:49988921-49988940 | None:intergenic | 15.0% |
| !!! | ATCATGATATAATTGATTTT+AGG | - | chr8_4:49989192-49989211 | Msa1330750:intron | 15.0% |
| !!! | TTTAGGATTATTCTTATTAT+TGG | - | chr8_4:49989209-49989228 | Msa1330750:intron | 15.0% |
| !!! | GAAATTAAAGATTTTGAATA+CGG | + | chr8_4:49989505-49989524 | None:intergenic | 15.0% |
| !! | CAAAAAAAAATCACAAAATT+AGG | + | chr8_4:49989565-49989584 | None:intergenic | 15.0% |
| !!! | CTAATTTTGTGATTTTTTTT+TGG | - | chr8_4:49989563-49989582 | Msa1330750:intron | 15.0% |
| !! | CAGAAAGAAAAAAAAAAAAT+TGG | + | chr8_4:49989808-49989827 | None:intergenic | 15.0% |
| !!! | CAATTTTTTTTTTTTCTTTC+TGG | - | chr8_4:49989806-49989825 | Msa1330750:intron | 15.0% |
| !! | ATCTATAAAGAAATAAACAA+AGG | + | chr8_4:49990382-49990401 | None:intergenic | 15.0% |
| !!! | AAAATATCCTTTATTTGAAA+GGG | + | chr8_4:49990556-49990575 | None:intergenic | 15.0% |
| !!! | AAAAATATCCTTTATTTGAA+AGG | + | chr8_4:49990557-49990576 | None:intergenic | 15.0% |
| !!! | TATTGAATTTTATTTTGTCA+TGG | - | chr8_4:49991560-49991579 | Msa1330750:intron | 15.0% |
| !!! | TATTTTTTAGTATACCATTA+TGG | + | chr8_4:49991941-49991960 | None:intergenic | 15.0% |
| !!! | TTTTGGAATTGTAAATTTTT+TGG | - | chr8_4:49992213-49992232 | Msa1330750:intron | 15.0% |
| !! | ATATCATGATTAAAAAACTA+TGG | + | chr8_4:49992428-49992447 | None:intergenic | 15.0% |
| !! | ATGATATTTATATTAACACT+GGG | - | chr8_4:49992441-49992460 | Msa1330750:intron | 15.0% |
| !!! | AATACTAGAAATTCTAGAAA+CGG | + | chr8_4:49986746-49986765 | None:intergenic | 20.0% |
| !! | AGTAAATATAAGTTATAAGC+TGG | + | chr8_4:49986972-49986991 | None:intergenic | 20.0% |
| !! | TTGATTGAATTTGTATTGTT+TGG | + | chr8_4:49987150-49987169 | None:intergenic | 20.0% |
| !!! | AATAATCTATTGATTTGTCT+TGG | + | chr8_4:49987613-49987632 | None:intergenic | 20.0% |
| !! | TTAAACTGAAATTCATTGTT+TGG | + | chr8_4:49987689-49987708 | None:intergenic | 20.0% |
| !!! | TGTTCTAAAAAAGATTAATC+TGG | + | chr8_4:49987809-49987828 | None:intergenic | 20.0% |
| !!! | TGGATAAGATTTTTTTATTG+TGG | + | chr8_4:49988222-49988241 | None:intergenic | 20.0% |
| !!! | AATTGTGTTTTGTTTATTGT+AGG | - | chr8_4:49989052-49989071 | Msa1330750:intron | 20.0% |
| !! | TTGTTTATTGTAGGTAAAAT+TGG | - | chr8_4:49989061-49989080 | Msa1330750:intron | 20.0% |
| !! | TGTTTATTGTAGGTAAAATT+GGG | - | chr8_4:49989062-49989081 | Msa1330750:intron | 20.0% |
| !! | TCTTATTATTGGTCAAAATT+AGG | - | chr8_4:49989220-49989239 | Msa1330750:intron | 20.0% |
| !! | CTTATTATTGGTCAAAATTA+GGG | - | chr8_4:49989221-49989240 | Msa1330750:intron | 20.0% |
| !!! | AATAGTTTTGGATAAGAAAT+GGG | + | chr8_4:49989472-49989491 | None:intergenic | 20.0% |
| !! | AATTAGGTCATAAAAAAAGA+GGG | + | chr8_4:49989549-49989568 | None:intergenic | 20.0% |
| !! | AAATTAGGTCATAAAAAAAG+AGG | + | chr8_4:49989550-49989569 | None:intergenic | 20.0% |
| !! | CTATAATGTACTATAAAGTA+TGG | - | chr8_4:49989835-49989854 | Msa1330750:intron | 20.0% |
| !! | ACTCTAAACAAAAACATTAA+CGG | + | chr8_4:49990319-49990338 | None:intergenic | 20.0% |
| !! | ATAAATCCAACAAAATATGA+AGG | + | chr8_4:49990966-49990985 | None:intergenic | 20.0% |
| !! | ACTTAACTTTGATTCTTATT+TGG | - | chr8_4:49991033-49991052 | Msa1330750:intron | 20.0% |
| !! | TCAATAATTGATATGTCATA+AGG | + | chr8_4:49991546-49991565 | None:intergenic | 20.0% |
| !! | TAAAAATACCTATACCTAAA+AGG | + | chr8_4:49991726-49991745 | None:intergenic | 20.0% |
| !!! | ACTACAAACTCAATAAATTT+TGG | - | chr8_4:49991860-49991879 | Msa1330750:intron | 20.0% |
| !! | AATTTACAATTCCAAAAAAC+TGG | + | chr8_4:49992210-49992229 | None:intergenic | 20.0% |
| !! | CACAATAATGTTAAGAAATT+TGG | - | chr8_4:49992341-49992360 | Msa1330750:intron | 20.0% |
| !! | CATGATATTTATATTAACAC+TGG | - | chr8_4:49992440-49992459 | Msa1330750:intron | 20.0% |
| !!! | TATATTTTACTGGTTTGAAA+AGG | + | chr8_4:49992794-49992813 | None:intergenic | 20.0% |
| ! | CTTTGTTGAATGTAATTTAC+AGG | - | chr8_4:49986812-49986831 | Msa1330750:three_prime_UTR | 25.0% |
| ! | TAATTTACAGGACATTATCA+AGG | - | chr8_4:49986824-49986843 | Msa1330750:three_prime_UTR | 25.0% |
| !!! | CTTTTGTTTTCTTTTCCTTT+TGG | + | chr8_4:49987567-49987586 | None:intergenic | 25.0% |
| ! | AACAAAAGCAATAAATCAAG+AGG | - | chr8_4:49987579-49987598 | Msa1330750:intron | 25.0% |
| !!! | TCTTTTTTGAGTTACATTCT+TGG | + | chr8_4:49987639-49987658 | None:intergenic | 25.0% |
| !! | ATGTTTTCGTCATATGAAAT+TGG | + | chr8_4:49987730-49987749 | None:intergenic | 25.0% |
| ! | CTTTATGTAGAAGATTTAGA+AGG | + | chr8_4:49988387-49988406 | None:intergenic | 25.0% |
| ! | CTTCTAAATCTTCTACATAA+AGG | - | chr8_4:49988385-49988404 | Msa1330750:CDS | 25.0% |
| ! | ATATGGAAGATTATGGTTTA+AGG | + | chr8_4:49988610-49988629 | None:intergenic | 25.0% |
| !! | TTTTGTTAGGTGAATAATGT+TGG | + | chr8_4:49988646-49988665 | None:intergenic | 25.0% |
| !! | GAGTCTAATTTCTTTTTGTT+AGG | + | chr8_4:49988659-49988678 | None:intergenic | 25.0% |
| !! | TGTCATTTAAAACGACATAA+TGG | + | chr8_4:49988707-49988726 | None:intergenic | 25.0% |
| !!! | TAGTCAATCGTCATTTTTTA+AGG | + | chr8_4:49988737-49988756 | None:intergenic | 25.0% |
| ! | ATTGTATTGAATTGAATGAG+TGG | - | chr8_4:49988943-49988962 | Msa1330750:intron | 25.0% |
| ! | TTCGAAGAAAAAATGTACAA+AGG | - | chr8_4:49989255-49989274 | Msa1330750:intron | 25.0% |
| !!! | GAATAGTTTTGGATAAGAAA+TGG | + | chr8_4:49989473-49989492 | None:intergenic | 25.0% |
| !! | GGAAACATAAAGAATAGTTT+TGG | + | chr8_4:49989484-49989503 | None:intergenic | 25.0% |
| !!! | TTTTTGGGAATTTTTGTTTG+TGG | - | chr8_4:49989579-49989598 | Msa1330750:intron | 25.0% |
| ! | TACCCTAATATGATTGAATT+GGG | - | chr8_4:49989622-49989641 | Msa1330750:intron | 25.0% |
| ! | ATCCCAATTCAATCATATTA+GGG | + | chr8_4:49989627-49989646 | None:intergenic | 25.0% |
| ! | AATCCCAATTCAATCATATT+AGG | + | chr8_4:49989628-49989647 | None:intergenic | 25.0% |
| !! | TTTTAGACTAGTGGAATATT+TGG | - | chr8_4:49989699-49989718 | Msa1330750:intron | 25.0% |
| ! | TTTAGACTAGTGGAATATTT+GGG | - | chr8_4:49989700-49989719 | Msa1330750:intron | 25.0% |
| !! | TGAGAGTATGATATTATTTG+CGG | - | chr8_4:49990601-49990620 | Msa1330750:intron | 25.0% |
| !!! | TTATGCTCTTGATTTGATTT+TGG | - | chr8_4:49990913-49990932 | Msa1330750:intron | 25.0% |
| ! | ATGGTTTAATTGGAATTCAT+AGG | - | chr8_4:49991155-49991174 | Msa1330750:intron | 25.0% |
| ! | ACAAAACGAGTTAATTGAAT+CGG | - | chr8_4:49991196-49991215 | Msa1330750:intron | 25.0% |
| ! | TAATTAAGTAGTGTGTTTGT+AGG | - | chr8_4:49991694-49991713 | Msa1330750:intron | 25.0% |
| !! | AGAAAAAAATGATTTGCATG+TGG | - | chr8_4:49991793-49991812 | Msa1330750:intron | 25.0% |
| !! | GAAAAAAATGATTTGCATGT+GGG | - | chr8_4:49991794-49991813 | Msa1330750:intron | 25.0% |
| ! | TTTGTAGTAGTTCAAACATA+TGG | + | chr8_4:49991848-49991867 | None:intergenic | 25.0% |
| ! | TGAAAATATTTCTTGTGCTT+GGG | - | chr8_4:49991883-49991902 | Msa1330750:intron | 25.0% |
| ! | TATGCAAGATATTCATTGTA+TGG | + | chr8_4:49991967-49991986 | None:intergenic | 25.0% |
| ! | AATATCTTGCATATGCATTA+TGG | - | chr8_4:49991974-49991993 | Msa1330750:intron | 25.0% |
| ! | ATATCTTGCATATGCATTAT+GGG | - | chr8_4:49991975-49991994 | Msa1330750:intron | 25.0% |
| !!! | TTTTCTGAAAGAAGGAAAAA+TGG | + | chr8_4:49992082-49992101 | None:intergenic | 25.0% |
| !!! | AGATATAGTTTTCTGAAAGA+AGG | + | chr8_4:49992090-49992109 | None:intergenic | 25.0% |
| ! | AACATTAGACAAAAAACAGA+AGG | + | chr8_4:49992246-49992265 | None:intergenic | 25.0% |
| ! | GAAATCAAGCTTAAAAACAA+TGG | + | chr8_4:49992367-49992386 | None:intergenic | 25.0% |
| ! | TATTTATATTAACACTGGGA+TGG | - | chr8_4:49992445-49992464 | Msa1330750:intron | 25.0% |
| !! | GTTTTATGATATTCATGTTC+TGG | - | chr8_4:49992467-49992486 | Msa1330750:intron | 25.0% |
| ! | ATAATTGTGGTTAGAATTGT+TGG | - | chr8_4:49992494-49992513 | Msa1330750:intron | 25.0% |
| !! | GTCTTGTTACAAATTGTATT+TGG | - | chr8_4:49992946-49992965 | Msa1330750:CDS | 25.0% |
| ! | ATCAGAGACAAAAAACATAA+AGG | + | chr8_4:49992978-49992997 | None:intergenic | 25.0% |
| ! | TTAAAACGGAAATGAGATAA+TGG | + | chr8_4:49993034-49993053 | None:intergenic | 25.0% |
| ! | TCCACAAATTCAACTTAAAA+CGG | + | chr8_4:49993048-49993067 | None:intergenic | 25.0% |
| GTATGAAAAGAAAAGAAGAG+TGG | + | chr8_4:49986702-49986721 | None:intergenic | 30.0% | |
| !! | TGGTTTGACAAAAAAGCATT+TGG | + | chr8_4:49987227-49987246 | None:intergenic | 30.0% |
| AAAACAGATAAAACGACATG+TGG | + | chr8_4:49987247-49987266 | None:intergenic | 30.0% | |
| ! | CGTTTTATCTGTTTTGCATT+TGG | - | chr8_4:49987252-49987271 | Msa1330750:intron | 30.0% |
| GATAAACTTGAAACTCTTTG+TGG | + | chr8_4:49987444-49987463 | None:intergenic | 30.0% | |
| !!! | TTTTTGAGTTACATTCTTGG+TGG | + | chr8_4:49987636-49987655 | None:intergenic | 30.0% |
| AACTGAAATTCATTGTTTGG+TGG | + | chr8_4:49987686-49987705 | None:intergenic | 30.0% | |
| AAACATTAAGACTTCGACAA+AGG | + | chr8_4:49988036-49988055 | None:intergenic | 30.0% | |
| !! | AGTTTTCTTTGTTTGCATTG+AGG | + | chr8_4:49988064-49988083 | None:intergenic | 30.0% |
| TTGCATATATGTGCATGTTA+GGG | + | chr8_4:49988330-49988349 | None:intergenic | 30.0% | |
| !! | AAATATTTGCTTGGTGTTAG+AGG | + | chr8_4:49988516-49988535 | None:intergenic | 30.0% |
| CATGTTGATATGGAAGATTA+TGG | + | chr8_4:49988617-49988636 | None:intergenic | 30.0% | |
| TTGGAAGTTACATGTTGATA+TGG | + | chr8_4:49988627-49988646 | None:intergenic | 30.0% | |
| ! | CATTTAAAACGACATAATGG+TGG | + | chr8_4:49988704-49988723 | None:intergenic | 30.0% |
| ATGGAAATAGTTGGATAACA+GGG | + | chr8_4:49988902-49988921 | None:intergenic | 30.0% | |
| AATGGAAATAGTTGGATAAC+AGG | + | chr8_4:49988903-49988922 | None:intergenic | 30.0% | |
| AGTGCTAAAATGGAAATAGT+TGG | + | chr8_4:49988911-49988930 | None:intergenic | 30.0% | |
| CTAATTCTCAACTTAAGCAA+AGG | + | chr8_4:49988999-49989018 | None:intergenic | 30.0% | |
| !!! | AGGGTTTTTGTTTTTGATGA+GGG | + | chr8_4:49989089-49989108 | None:intergenic | 30.0% |
| !!! | TAGGGTTTTTGTTTTTGATG+AGG | + | chr8_4:49989090-49989109 | None:intergenic | 30.0% |
| GTACCCTAATATGATTGAAT+TGG | - | chr8_4:49989621-49989640 | Msa1330750:intron | 30.0% | |
| TGATTGAATTGGGATTTAGA+TGG | - | chr8_4:49989632-49989651 | Msa1330750:intron | 30.0% | |
| !! | TGATTCATGTTTTAGACTAG+TGG | - | chr8_4:49989690-49989709 | Msa1330750:intron | 30.0% |
| ACAAAAACATTAACGGTACA+AGG | + | chr8_4:49990312-49990331 | None:intergenic | 30.0% | |
| AAGGTTACAAAGAGTTTAGA+GGG | + | chr8_4:49990363-49990382 | None:intergenic | 30.0% | |
| AAAGGTTACAAAGAGTTTAG+AGG | + | chr8_4:49990364-49990383 | None:intergenic | 30.0% | |
| ! | AACATGGACAAATATTTTCC+TGG | + | chr8_4:49990470-49990489 | None:intergenic | 30.0% |
| TCTCTTTCCCTTTCAAATAA+AGG | - | chr8_4:49990546-49990565 | Msa1330750:intron | 30.0% | |
| TTACAATATGAGAGAGATTG+AGG | - | chr8_4:49990639-49990658 | Msa1330750:intron | 30.0% | |
| TACAATATGAGAGAGATTGA+GGG | - | chr8_4:49990640-49990659 | Msa1330750:intron | 30.0% | |
| !!! | TTAGTTTTGCATTTATGCGT+TGG | - | chr8_4:49990706-49990725 | Msa1330750:intron | 30.0% |
| ! | TCAAGAGCATAATCATAGTA+AGG | + | chr8_4:49990905-49990924 | None:intergenic | 30.0% |
| ! | AGCTTTCCTTCATATTTTGT+TGG | - | chr8_4:49990957-49990976 | Msa1330750:intron | 30.0% |
| TTGGATTTATTGTACAAGCA+TGG | - | chr8_4:49990976-49990995 | Msa1330750:intron | 30.0% | |
| TTATTGTACAACTGCTTCTA+TGG | - | chr8_4:49991136-49991155 | Msa1330750:intron | 30.0% | |
| AACTGCTTCTATGGTTTAAT+TGG | - | chr8_4:49991145-49991164 | Msa1330750:intron | 30.0% | |
| AAGTACAAGAACTATGACTT+TGG | - | chr8_4:49991379-49991398 | Msa1330750:intron | 30.0% | |
| AATAAAGATCTTCACACCTA+GGG | + | chr8_4:49991495-49991514 | None:intergenic | 30.0% | |
| TAATAAAGATCTTCACACCT+AGG | + | chr8_4:49991496-49991515 | None:intergenic | 30.0% | |
| GTGAAGATCTTTATTATCCT+CGG | - | chr8_4:49991500-49991519 | Msa1330750:intron | 30.0% | |
| AAAGCAAGGAAAAAAAAGTG+AGG | + | chr8_4:49991644-49991663 | None:intergenic | 30.0% | |
| TCAAATGAAACTCAAAAGCA+AGG | + | chr8_4:49991658-49991677 | None:intergenic | 30.0% | |
| AATATATGCCAGCTAGTATT+TGG | - | chr8_4:49991763-49991782 | Msa1330750:intron | 30.0% | |
| GTGAAAATATTTCTTGTGCT+TGG | - | chr8_4:49991882-49991901 | Msa1330750:intron | 30.0% | |
| TATCTTGCATATGCATTATG+GGG | - | chr8_4:49991976-49991995 | Msa1330750:intron | 30.0% | |
| !! | TTTGTTTAGTATCGATTCCA+TGG | - | chr8_4:49992305-49992324 | Msa1330750:intron | 30.0% |
| ! | ATGTTCTGGCTATATAATTG+TGG | - | chr8_4:49992481-49992500 | Msa1330750:intron | 30.0% |
| TAAGCTTTCATGAAAGTAAG+AGG | - | chr8_4:49992706-49992725 | Msa1330750:intron | 30.0% | |
| CAGAAGAGTTAAATGAGATT+CGG | + | chr8_4:49992736-49992755 | None:intergenic | 30.0% | |
| ! | AACGGATGTCTATATTTTAC+TGG | + | chr8_4:49992804-49992823 | None:intergenic | 30.0% |
| !! | ACATCCGTTTTACTTGTTTT+AGG | - | chr8_4:49992815-49992834 | Msa1330750:intron | 30.0% |
| !!! | TCCGTTTTAAGTTGAATTTG+TGG | - | chr8_4:49993044-49993063 | Msa1330750:CDS | 30.0% |
| TGAGAAAACGAGGAAAATGA+TGG | + | chr8_4:49986643-49986662 | None:intergenic | 35.0% | |
| ! | TCATTTTCCTCGTTTTCTCA+AGG | - | chr8_4:49986643-49986662 | Msa1330750:three_prime_UTR | 35.0% |
| AATGATACCTTGAGAAAACG+AGG | + | chr8_4:49986653-49986672 | None:intergenic | 35.0% | |
| AAAGAAAAGAAGAGTGGAAC+TGG | + | chr8_4:49986696-49986715 | None:intergenic | 35.0% | |
| TTTACAGGACATTATCAAGG+AGG | - | chr8_4:49986827-49986846 | Msa1330750:three_prime_UTR | 35.0% | |
| !!! | TCAGTTTCCTCTTTTTGGTT+TGG | - | chr8_4:49986929-49986948 | Msa1330750:CDS | 35.0% |
| ATAAGCTGGTGAGAAAATGA+CGG | + | chr8_4:49986958-49986977 | None:intergenic | 35.0% | |
| TAGGGAATGTTAGATGAACA+TGG | + | chr8_4:49987405-49987424 | None:intergenic | 35.0% | |
| ACTTGAAACTCTTTGTGGTA+GGG | + | chr8_4:49987439-49987458 | None:intergenic | 35.0% | |
| AACTTGAAACTCTTTGTGGT+AGG | + | chr8_4:49987440-49987459 | None:intergenic | 35.0% | |
| TTGTGTTCGTTCTCTATTCT+AGG | + | chr8_4:49987525-49987544 | None:intergenic | 35.0% | |
| TAGAATAGAGAACGAACACA+AGG | - | chr8_4:49987524-49987543 | Msa1330750:intron | 35.0% | |
| GTAATACGAAGAGAACCAAA+AGG | - | chr8_4:49987549-49987568 | Msa1330750:intron | 35.0% | |
| ! | TGAAATTCATTGTTTGGTGG+TGG | + | chr8_4:49987683-49987702 | None:intergenic | 35.0% |
| GCACAATTATTTGCAGTACT+AGG | - | chr8_4:49987852-49987871 | Msa1330750:intron | 35.0% | |
| ! | AAGTCTCTTTTATGCTTGAG+AGG | + | chr8_4:49987981-49988000 | None:intergenic | 35.0% |
| ! | TTATCATTTGTTGACCTACG+AGG | + | chr8_4:49988134-49988153 | None:intergenic | 35.0% |
| TAGAATGATCTTTGCTTTGG+AGG | + | chr8_4:49988274-49988293 | None:intergenic | 35.0% | |
| GTGTAGAATGATCTTTGCTT+TGG | + | chr8_4:49988277-49988296 | None:intergenic | 35.0% | |
| TGCATATATGTGCATGTTAG+GGG | + | chr8_4:49988329-49988348 | None:intergenic | 35.0% | |
| GTTGCATATATGTGCATGTT+AGG | + | chr8_4:49988331-49988350 | None:intergenic | 35.0% | |
| CAAATATTTCCACCACACAT+AGG | - | chr8_4:49988527-49988546 | Msa1330750:intron | 35.0% | |
| TCAACTTAAGCAAAGGTAGT+AGG | + | chr8_4:49988992-49989011 | None:intergenic | 35.0% | |
| GTCTCAAATCTACAACCAAA+AGG | - | chr8_4:49989121-49989140 | Msa1330750:intron | 35.0% | |
| TATATCCTTCTACCTTAGCT+GGG | + | chr8_4:49989168-49989187 | None:intergenic | 35.0% | |
| ATATATCCTTCTACCTTAGC+TGG | + | chr8_4:49989169-49989188 | None:intergenic | 35.0% | |
| GAAAAAATGTACAAAGGTCG+TGG | - | chr8_4:49989261-49989280 | Msa1330750:intron | 35.0% | |
| !!! | TTGTTGGTTTTGCCATTGAT+GGG | + | chr8_4:49989378-49989397 | None:intergenic | 35.0% |
| !!! | TTTGTTGGTTTTGCCATTGA+TGG | + | chr8_4:49989379-49989398 | None:intergenic | 35.0% |
| ! | ATTGGTTTCTCTCTCTTTGT+TGG | + | chr8_4:49989394-49989413 | None:intergenic | 35.0% |
| !! | AGAAATATTGGCAGTTTTGG+AGG | + | chr8_4:49989445-49989464 | None:intergenic | 35.0% |
| TCCAAAACTGCCAATATTTC+TGG | - | chr8_4:49989444-49989463 | Msa1330750:intron | 35.0% | |
| ! | ACCAGAAATATTGGCAGTTT+TGG | + | chr8_4:49989448-49989467 | None:intergenic | 35.0% |
| GAAATGGGTACCAGAAATAT+TGG | + | chr8_4:49989457-49989476 | None:intergenic | 35.0% | |
| ATTGGGATTTAGATGGTTGT+TGG | - | chr8_4:49989639-49989658 | Msa1330750:intron | 35.0% | |
| AAAAAAAATTGGGTCCGAAG+TGG | + | chr8_4:49989797-49989816 | None:intergenic | 35.0% | |
| TAGAACCCAATTTGTGCAAA+CGG | - | chr8_4:49989874-49989893 | Msa1330750:intron | 35.0% | |
| GGAAGCTTAGAGGTAAATTA+GGG | - | chr8_4:49989895-49989914 | Msa1330750:intron | 35.0% | |
| TATGTTGTTGTGTGATCGAT+CGG | - | chr8_4:49989951-49989970 | Msa1330750:intron | 35.0% | |
| GTGACTTATCATTTCCGATA+AGG | - | chr8_4:49989985-49990004 | Msa1330750:intron | 35.0% | |
| GTGTTCAGTGATTACCTTAT+CGG | + | chr8_4:49990002-49990021 | None:intergenic | 35.0% | |
| ! | CTGGTGATTTTTGTCTTTAC+TGG | - | chr8_4:49990272-49990291 | Msa1330750:CDS | 35.0% |
| AGGTTACAAAGAGTTTAGAG+GGG | + | chr8_4:49990362-49990381 | None:intergenic | 35.0% | |
| ! | ATATTTTCCTGGAGCATACA+AGG | + | chr8_4:49990459-49990478 | None:intergenic | 35.0% |
| TAACAAGCAGAAACAGCATA+AGG | + | chr8_4:49990526-49990545 | None:intergenic | 35.0% | |
| ! | AGGAAATGAGTTCTTTTGTG+AGG | - | chr8_4:49990823-49990842 | Msa1330750:intron | 35.0% |
| ! | CATAATCATAGTAAGGCACT+TGG | + | chr8_4:49990898-49990917 | None:intergenic | 35.0% |
| CGTTACATATTGACAAGCAA+AGG | - | chr8_4:49991251-49991270 | Msa1330750:intron | 35.0% | |
| CATATTGACAAGCAAAGGAA+TGG | - | chr8_4:49991256-49991275 | Msa1330750:intron | 35.0% | |
| ! | CTTTTCATGCTTTACTATCC+AGG | - | chr8_4:49991313-49991332 | Msa1330750:intron | 35.0% |
| TGTTAACAATGTCAATCTCC+TGG | + | chr8_4:49991334-49991353 | None:intergenic | 35.0% | |
| ! | ATTTTCACAGTACTTGACCT+AGG | + | chr8_4:49991466-49991485 | None:intergenic | 35.0% |
| CTGTGAAAATATATTGCCCT+AGG | - | chr8_4:49991476-49991495 | Msa1330750:intron | 35.0% | |
| AAATAGCTTCAGTGACATAG+TGG | + | chr8_4:49991609-49991628 | None:intergenic | 35.0% | |
| ! | TTTGTAGGATGTGACCTTTT+AGG | - | chr8_4:49991709-49991728 | Msa1330750:intron | 35.0% |
| TTTCCATACCAAATACTAGC+TGG | + | chr8_4:49991774-49991793 | None:intergenic | 35.0% | |
| ATCTTGCATATGCATTATGG+GGG | - | chr8_4:49991977-49991996 | Msa1330750:intron | 35.0% | |
| ! | AGTCAACAAACACTTTTCAG+AGG | + | chr8_4:49992045-49992064 | None:intergenic | 35.0% |
| GGTTACAACAACTAGAAACA+CGG | + | chr8_4:49992117-49992136 | None:intergenic | 35.0% | |
| ! | ATGGCAGTTTCTGAAAACTT+TGG | - | chr8_4:49992146-49992165 | Msa1330750:intron | 35.0% |
| ! | TGGCAGTTTCTGAAAACTTT+GGG | - | chr8_4:49992147-49992166 | Msa1330750:intron | 35.0% |
| !!! | CTGAAAAGTGACCAGTTTTT+TGG | - | chr8_4:49992196-49992215 | Msa1330750:intron | 35.0% |
| ! | GACATTGATGGAGCTTATTT+TGG | - | chr8_4:49992563-49992582 | Msa1330750:intron | 35.0% |
| AGTTTGAACCCAAAAACTCT+TGG | + | chr8_4:49992662-49992681 | None:intergenic | 35.0% | |
| CTCATTTAACTCTTCTGTTG+TGG | - | chr8_4:49992739-49992758 | Msa1330750:CDS | 35.0% | |
| CGCTCCTAAAACAAGTAAAA+CGG | + | chr8_4:49992822-49992841 | None:intergenic | 35.0% | |
| TTGAAGCTGAAAGTGAAACT+AGG | + | chr8_4:49992883-49992902 | None:intergenic | 35.0% | |
| AATTCAATGAGCAAGTGCTT+AGG | - | chr8_4:49992902-49992921 | Msa1330750:intron | 35.0% | |
| TTTGGATAACGAAGCAACGA+CGG | + | chr8_4:49986522-49986541 | None:intergenic | 40.0% | |
| ! | AGGAACTTGATCGAAGCTTT+TGG | + | chr8_4:49986540-49986559 | None:intergenic | 40.0% |
| !! | ACGAGGAAAATGATGGATGA+GGG | + | chr8_4:49986636-49986655 | None:intergenic | 40.0% |
| !! | AACGAGGAAAATGATGGATG+AGG | + | chr8_4:49986637-49986656 | None:intergenic | 40.0% |
| GATCAAGAAGTAACAGTACG+AGG | + | chr8_4:49986724-49986743 | None:intergenic | 40.0% | |
| TATCAAGGAGGATGGTTCTT+TGG | - | chr8_4:49986839-49986858 | Msa1330750:three_prime_UTR | 40.0% | |
| ! | GAAACTGACCTGTTTTCTTC+AGG | + | chr8_4:49986917-49986936 | None:intergenic | 40.0% |
| ! | ACAGGTCAGTTTCCTCTTTT+TGG | - | chr8_4:49986924-49986943 | Msa1330750:CDS | 40.0% |
| ACGGTTACCAAACCAAAAAG+AGG | + | chr8_4:49986939-49986958 | None:intergenic | 40.0% | |
| CTCTGCTTGGTAAGAAATAG+TGG | + | chr8_4:49987204-49987223 | None:intergenic | 40.0% | |
| !! | AAAAAGCATTTGGCTCTGCT+TGG | + | chr8_4:49987217-49987236 | None:intergenic | 40.0% |
| TAGATGAACATGGAGTACGA+AGG | + | chr8_4:49987395-49987414 | None:intergenic | 40.0% | |
| ! | GGTAGGGCATATTTGGTTTA+GGG | + | chr8_4:49987423-49987442 | None:intergenic | 40.0% |
| ! | TGGTAGGGCATATTTGGTTT+AGG | + | chr8_4:49987424-49987443 | None:intergenic | 40.0% |
| TCTTTGTGGTAGGGCATATT+TGG | + | chr8_4:49987430-49987449 | None:intergenic | 40.0% | |
| ! | TCTAGGCATAACTTGTGCTT+GGG | + | chr8_4:49987508-49987527 | None:intergenic | 40.0% |
| ! | TTCTAGGCATAACTTGTGCT+TGG | + | chr8_4:49987509-49987528 | None:intergenic | 40.0% |
| TTGACTAAGTATCCATCCCT+AGG | - | chr8_4:49988160-49988179 | Msa1330750:CDS | 40.0% | |
| TGGAAAATTGATCCTAGGGA+TGG | + | chr8_4:49988175-49988194 | None:intergenic | 40.0% | |
| GGGTTGGAAAATTGATCCTA+GGG | + | chr8_4:49988179-49988198 | None:intergenic | 40.0% | |
| ! | AATAGCGCTTTTGACAACAG+GGG | + | chr8_4:49988199-49988218 | None:intergenic | 40.0% |
| ! | GAATAGCGCTTTTGACAACA+GGG | + | chr8_4:49988200-49988219 | None:intergenic | 40.0% |
| !!! | TGGTAGAGTGTCGTTTTTGT+TGG | + | chr8_4:49988242-49988261 | None:intergenic | 40.0% |
| TTGAAGTTGTATGGTAGGGA+TGG | + | chr8_4:49988299-49988318 | None:intergenic | 40.0% | |
| ! | GGTGTTGAAGTTGTATGGTA+GGG | + | chr8_4:49988303-49988322 | None:intergenic | 40.0% |
| !! | AGGTGTTGAAGTTGTATGGT+AGG | + | chr8_4:49988304-49988323 | None:intergenic | 40.0% |
| ! | TTGGTGAGAGCATGAGTAAT+GGG | + | chr8_4:49988453-49988472 | None:intergenic | 40.0% |
| ! | TTTGGTGAGAGCATGAGTAA+TGG | + | chr8_4:49988454-49988473 | None:intergenic | 40.0% |
| ! | GTGTGGTGGAAATATTTGCT+TGG | + | chr8_4:49988525-49988544 | None:intergenic | 40.0% |
| !! | GGTTTAAGGTGTTGACAACT+AGG | + | chr8_4:49988596-49988615 | None:intergenic | 40.0% |
| TTTGAGGGTTCAGAGAATCT+GGG | + | chr8_4:49988681-49988700 | None:intergenic | 40.0% | |
| ACGACATAATGGTGGTTTGA+GGG | + | chr8_4:49988696-49988715 | None:intergenic | 40.0% | |
| AACGACATAATGGTGGTTTG+AGG | + | chr8_4:49988697-49988716 | None:intergenic | 40.0% | |
| TTGAGACACAGTGTGTGTTA+GGG | + | chr8_4:49989108-49989127 | None:intergenic | 40.0% | |
| ! | TTTGAGACACAGTGTGTGTT+AGG | + | chr8_4:49989109-49989128 | None:intergenic | 40.0% |
| !! | CCTTTCGGCTATTTTCCTTT+TGG | + | chr8_4:49989139-49989158 | None:intergenic | 40.0% |
| CCAAAAGGAAAATAGCCGAA+AGG | - | chr8_4:49989136-49989155 | Msa1330750:intron | 40.0% | |
| TTAGCTGGGAAAATGCCTTT+CGG | + | chr8_4:49989154-49989173 | None:intergenic | 40.0% | |
| ! | ATTTTCCCAGCTAAGGTAGA+AGG | - | chr8_4:49989160-49989179 | Msa1330750:intron | 40.0% |
| AAAATGTACAAAGGTCGTGG+TGG | - | chr8_4:49989264-49989283 | Msa1330750:intron | 40.0% | |
| GAGAGAAACCAATACCATCA+AGG | - | chr8_4:49989401-49989420 | Msa1330750:intron | 40.0% | |
| TTTGGAGGATCGTTGAAGAA+GGG | + | chr8_4:49989430-49989449 | None:intergenic | 40.0% | |
| !! | TTTTGGAGGATCGTTGAAGA+AGG | + | chr8_4:49989431-49989450 | None:intergenic | 40.0% |
| GATATCCAGTCTATCAAGCT+AGG | + | chr8_4:49989737-49989756 | None:intergenic | 40.0% | |
| ACTCACACTTTACAACTTCG+AGG | + | chr8_4:49989771-49989790 | None:intergenic | 40.0% | |
| ! | AAAGTGTGAGTTTGCCACTT+CGG | - | chr8_4:49989780-49989799 | Msa1330750:intron | 40.0% |
| AGCTTCCGTTTGCACAAATT+GGG | + | chr8_4:49989882-49989901 | None:intergenic | 40.0% | |
| AAGCTTCCGTTTGCACAAAT+TGG | + | chr8_4:49989883-49989902 | None:intergenic | 40.0% | |
| CGGAAGCTTAGAGGTAAATT+AGG | - | chr8_4:49989894-49989913 | Msa1330750:intron | 40.0% | |
| AGCTTAGAGGTAAATTAGGG+AGG | - | chr8_4:49989898-49989917 | Msa1330750:intron | 40.0% | |
| TTAGAGGTAAATTAGGGAGG+AGG | - | chr8_4:49989901-49989920 | Msa1330750:intron | 40.0% | |
| TAGAGGTAAATTAGGGAGGA+GGG | - | chr8_4:49989902-49989921 | Msa1330750:intron | 40.0% | |
| ATGTTGTTGTGTGATCGATC+GGG | - | chr8_4:49989952-49989971 | Msa1330750:intron | 40.0% | |
| TCTTGATCTTATCCACCAGT+TGG | + | chr8_4:49990024-49990043 | None:intergenic | 40.0% | |
| ATAAGATCAAGACCACCTTG+CGG | - | chr8_4:49990032-49990051 | Msa1330750:intron | 40.0% | |
| TTCCATATCCTACCTGTAGT+AGG | + | chr8_4:49990095-49990114 | None:intergenic | 40.0% | |
| ! | TTAGAGTACTTCTTGTACCC+TGG | - | chr8_4:49990332-49990351 | Msa1330750:CDS | 40.0% |
| ! | TAGAGTACTTCTTGTACCCT+GGG | - | chr8_4:49990333-49990352 | Msa1330750:CDS | 40.0% |
| TTTATCACCTTGTATGCTCC+AGG | - | chr8_4:49990449-49990468 | Msa1330750:CDS | 40.0% | |
| AGGAGAGAAAAGACAGAACA+TGG | + | chr8_4:49990486-49990505 | None:intergenic | 40.0% | |
| TGAAACAGACAGTGAAGAGT+CGG | - | chr8_4:49990742-49990761 | Msa1330750:intron | 40.0% | |
| CACAAAGGTTGAAGTCATCT+TGG | + | chr8_4:49990865-49990884 | None:intergenic | 40.0% | |
| CAAGATGACTTCAACCTTTG+TGG | - | chr8_4:49990863-49990882 | Msa1330750:intron | 40.0% | |
| TTGGATGTTGAATCCTCTCA+TGG | - | chr8_4:49990932-49990951 | Msa1330750:intron | 40.0% | |
| CATAGGTGATATGTTCACAG+AGG | - | chr8_4:49991172-49991191 | Msa1330750:intron | 40.0% | |
| AAGGATACTGCCTTGATACT+TGG | + | chr8_4:49991527-49991546 | None:intergenic | 40.0% | |
| !! | GGATGTGACCTTTTAGGTAT+AGG | - | chr8_4:49991715-49991734 | Msa1330750:intron | 40.0% |
| ATGCCAGCTAGTATTTGGTA+TGG | - | chr8_4:49991768-49991787 | Msa1330750:intron | 40.0% | |
| TATAAACTGCTCTCTGGACA+TGG | - | chr8_4:49991818-49991837 | Msa1330750:intron | 40.0% | |
| AAGACTTTGCTGCTCCATAA+TGG | - | chr8_4:49991924-49991943 | Msa1330750:intron | 40.0% | |
| CTAGTTGTTGTAACCTCAAG+TGG | - | chr8_4:49992122-49992141 | Msa1330750:intron | 40.0% | |
| TGTTGTAACCTCAAGTGGAA+TGG | - | chr8_4:49992127-49992146 | Msa1330750:intron | 40.0% | |
| TCAATGTCTAGACAGAGTCA+AGG | + | chr8_4:49992551-49992570 | None:intergenic | 40.0% | |
| TGACTCTGTCTAGACATTGA+TGG | - | chr8_4:49992551-49992570 | Msa1330750:intron | 40.0% | |
| TATGTCATCAAGAAGAGGTG+TGG | + | chr8_4:49992599-49992618 | None:intergenic | 40.0% | |
| ! | CACCTCTTCTTGATGACATA+TGG | - | chr8_4:49992599-49992618 | Msa1330750:intron | 40.0% |
| GTCCATATGTCATCAAGAAG+AGG | + | chr8_4:49992604-49992623 | None:intergenic | 40.0% | |
| ! | GCTACGTTCCAAGAGTTTTT+GGG | - | chr8_4:49992651-49992670 | Msa1330750:intron | 40.0% |
| AGCTTAAACTTCCAGCTTCA+TGG | + | chr8_4:49992692-49992711 | None:intergenic | 40.0% | |
| GATTGCATTCTCGTTTCCAC+TGG | - | chr8_4:49986584-49986603 | Msa1330750:three_prime_UTR | 45.0% | |
| CAGGACATTATCAAGGAGGA+TGG | - | chr8_4:49986831-49986850 | Msa1330750:three_prime_UTR | 45.0% | |
| TTCCAATAAACGACACCGTC+TGG | - | chr8_4:49986863-49986882 | Msa1330750:three_prime_UTR | 45.0% | |
| TGTCACCTCCTGAAGAAAAC+AGG | - | chr8_4:49986906-49986925 | Msa1330750:CDS | 45.0% | |
| ! | ACTGACCTGTTTTCTTCAGG+AGG | + | chr8_4:49986914-49986933 | None:intergenic | 45.0% |
| CTTGAGAGGTTGTGAGAAAG+TGG | + | chr8_4:49987967-49987986 | None:intergenic | 45.0% | |
| ! | GCATGCTGGTGATGTATCTT+AGG | + | chr8_4:49988008-49988027 | None:intergenic | 45.0% |
| TTGTTGACCTACGAGGTTGA+GGG | + | chr8_4:49988127-49988146 | None:intergenic | 45.0% | |
| TTTGTTGACCTACGAGGTTG+AGG | + | chr8_4:49988128-49988147 | None:intergenic | 45.0% | |
| GGGGTTGGAAAATTGATCCT+AGG | + | chr8_4:49988180-49988199 | None:intergenic | 45.0% | |
| ! | GGAATAGCGCTTTTGACAAC+AGG | + | chr8_4:49988201-49988220 | None:intergenic | 45.0% |
| !! | CTTTGCTTTGGAGGATGAGT+AGG | + | chr8_4:49988265-49988284 | None:intergenic | 45.0% |
| !! | GGTGAGGTGTTGAAGTTGTA+TGG | + | chr8_4:49988308-49988327 | None:intergenic | 45.0% |
| ATATGTGCATGTTAGGGGTG+AGG | + | chr8_4:49988324-49988343 | None:intergenic | 45.0% | |
| !! | GTTTTGACCAGATCCATGGT+TGG | + | chr8_4:49988419-49988438 | None:intergenic | 45.0% |
| !!! | CGTTGTTTTGACCAGATCCA+TGG | + | chr8_4:49988423-49988442 | None:intergenic | 45.0% |
| ! | TGGTGAGAGCATGAGTAATG+GGG | + | chr8_4:49988452-49988471 | None:intergenic | 45.0% |
| !! | TTGGTGTTAGAGGAAGAGTG+GGG | + | chr8_4:49988506-49988525 | None:intergenic | 45.0% |
| !! | CTTGGTGTTAGAGGAAGAGT+GGG | + | chr8_4:49988507-49988526 | None:intergenic | 45.0% |
| ATTTCCACCACACATAGGTC+TGG | - | chr8_4:49988532-49988551 | Msa1330750:intron | 45.0% | |
| ACAACTAGGTATGAGGTGGA+TGG | + | chr8_4:49988582-49988601 | None:intergenic | 45.0% | |
| GTTGACAACTAGGTATGAGG+TGG | + | chr8_4:49988586-49988605 | None:intergenic | 45.0% | |
| !! | GGTGTTGACAACTAGGTATG+AGG | + | chr8_4:49988589-49988608 | None:intergenic | 45.0% |
| GTTTGAGGGTTCAGAGAATC+TGG | + | chr8_4:49988682-49988701 | None:intergenic | 45.0% | |
| GGGCAATGACACAACTAATG+AGG | - | chr8_4:49988871-49988890 | Msa1330750:intron | 45.0% | |
| !!! | GAAAGGCATTTTCCCAGCTA+AGG | - | chr8_4:49989153-49989172 | Msa1330750:intron | 45.0% |
| ! | TGGTTCTGCCTCCAACAAAT+CGG | - | chr8_4:49989284-49989303 | Msa1330750:intron | 45.0% |
| ! | CTTTCGATCCTCCGATTTGT+TGG | + | chr8_4:49989298-49989317 | None:intergenic | 45.0% |
| ! | AAGGGGATCCTTGATGGTAT+TGG | + | chr8_4:49989412-49989431 | None:intergenic | 45.0% |
| TTGAAGAAGGGGATCCTTGA+TGG | + | chr8_4:49989418-49989437 | None:intergenic | 45.0% | |
| TTGGAGGATCGTTGAAGAAG+GGG | + | chr8_4:49989429-49989448 | None:intergenic | 45.0% | |
| TGAGACCTAGCTTGATAGAC+TGG | - | chr8_4:49989729-49989748 | Msa1330750:intron | 45.0% | |
| ATAGACTGGATATCCTCACC+CGG | - | chr8_4:49989743-49989762 | Msa1330750:intron | 45.0% | |
| TTGTGCAAACGGAAGCTTAG+AGG | - | chr8_4:49989885-49989904 | Msa1330750:intron | 45.0% | |
| AGAGGTAAATTAGGGAGGAG+GGG | - | chr8_4:49989903-49989922 | Msa1330750:intron | 45.0% | |
| !!! | GGTTAGGTTGGCTTTTGGTT+TGG | - | chr8_4:49989928-49989947 | Msa1330750:intron | 45.0% |
| GGTAATCACTGAACACCAAC+TGG | - | chr8_4:49990006-49990025 | Msa1330750:intron | 45.0% | |
| AATCACTGAACACCAACTGG+TGG | - | chr8_4:49990009-49990028 | Msa1330750:intron | 45.0% | |
| TAAGAACCATTTCCGCAAGG+TGG | + | chr8_4:49990047-49990066 | None:intergenic | 45.0% | |
| ACCTTGCGGAAATGGTTCTT+AGG | - | chr8_4:49990046-49990065 | Msa1330750:intron | 45.0% | |
| CCTTGCGGAAATGGTTCTTA+GGG | - | chr8_4:49990047-49990066 | Msa1330750:intron | 45.0% | |
| !! | TGGTTCTTAGGGAAGCATTC+TGG | - | chr8_4:49990058-49990077 | Msa1330750:intron | 45.0% |
| GACATTACTGCTCCTACTAC+AGG | - | chr8_4:49990080-49990099 | Msa1330750:intron | 45.0% | |
| TTACTGCTCCTACTACAGGT+AGG | - | chr8_4:49990084-49990103 | Msa1330750:intron | 45.0% | |
| CTCCTACTACAGGTAGGATA+TGG | - | chr8_4:49990090-49990109 | Msa1330750:intron | 45.0% | |
| TCTTTGTCTCGTTCAGCTGA+TGG | - | chr8_4:49990193-49990212 | Msa1330750:CDS | 45.0% | |
| CTTTGTCTCGTTCAGCTGAT+GGG | - | chr8_4:49990194-49990213 | Msa1330750:CDS | 45.0% | |
| ! | GCTGATGGGTAATCTGTTTC+TGG | - | chr8_4:49990208-49990227 | Msa1330750:CDS | 45.0% |
| !! | TCTGTTTCTGGTGCTTTCCT+TGG | - | chr8_4:49990220-49990239 | Msa1330750:CDS | 45.0% |
| !! | CTGTTTCTGGTGCTTTCCTT+GGG | - | chr8_4:49990221-49990240 | Msa1330750:CDS | 45.0% |
| ! | CTTTCCTTGGGTTTGGAGTT+GGG | - | chr8_4:49990233-49990252 | Msa1330750:CDS | 45.0% |
| ! | TTTCCTTGGGTTTGGAGTTG+GGG | - | chr8_4:49990234-49990253 | Msa1330750:CDS | 45.0% |
| AGGACACATCTTGGATCTCA+TGG | - | chr8_4:49990786-49990805 | Msa1330750:intron | 45.0% | |
| ! | TCATGGTTCTGCAATCTCAG+AGG | - | chr8_4:49990803-49990822 | Msa1330750:intron | 45.0% |
| AAGCAAAGGAATGGCTGCTA+TGG | - | chr8_4:49991265-49991284 | Msa1330750:intron | 45.0% | |
| GTCCAGAGCAGTAAACTCTT+GGG | + | chr8_4:49991411-49991430 | None:intergenic | 45.0% | |
| TGTCCAGAGCAGTAAACTCT+TGG | + | chr8_4:49991412-49991431 | None:intergenic | 45.0% | |
| TATCCTCGGTCCAAGTATCA+AGG | - | chr8_4:49991514-49991533 | Msa1330750:intron | 45.0% | |
| ! | GTGGGTTATAAACTGCTCTC+TGG | - | chr8_4:49991812-49991831 | Msa1330750:intron | 45.0% |
| AGAAACTGCCATTCCACTTG+AGG | + | chr8_4:49992138-49992157 | None:intergenic | 45.0% | |
| TGTGCGATAGAGAAAGACCA+TGG | + | chr8_4:49992325-49992344 | None:intergenic | 45.0% | |
| ! | GGCTACGTTCCAAGAGTTTT+TGG | - | chr8_4:49992650-49992669 | Msa1330750:intron | 45.0% |
| AACTTCACAAGCCATGAAGC+TGG | - | chr8_4:49992678-49992697 | Msa1330750:intron | 45.0% | |
| !!! | TATTATATTTTTTTTTATTG+GGG | - | chr8_4:49988851-49988870 | Msa1330750:intron | 5.0% |
| !! | AATGATGGATGAGGGAAGCG+AGG | + | chr8_4:49986628-49986647 | None:intergenic | 50.0% |
| !! | CACCAGACGGTGTCGTTTAT+TGG | + | chr8_4:49986868-49986887 | None:intergenic | 50.0% |
| AATCTGGTGTGCAGTCAGTC+TGG | + | chr8_4:49987793-49987812 | None:intergenic | 50.0% | |
| CGACAAAGGATAACGCATGC+TGG | + | chr8_4:49988022-49988041 | None:intergenic | 50.0% | |
| !! | TGCTTTGGAGGATGAGTAGG+TGG | + | chr8_4:49988262-49988281 | None:intergenic | 50.0% |
| AAAGGACCACCAACCAACCA+TGG | - | chr8_4:49988403-49988422 | Msa1330750:CDS | 50.0% | |
| TGACCAGATCCATGGTTGGT+TGG | + | chr8_4:49988415-49988434 | None:intergenic | 50.0% | |
| GTTAGAGGAAGAGTGGGGTT+GGG | + | chr8_4:49988501-49988520 | None:intergenic | 50.0% | |
| TGTTAGAGGAAGAGTGGGGT+TGG | + | chr8_4:49988502-49988521 | None:intergenic | 50.0% | |
| !! | GCTTGGTGTTAGAGGAAGAG+TGG | + | chr8_4:49988508-49988527 | None:intergenic | 50.0% |
| GGTCGTGGTAAACATGGATG+AGG | + | chr8_4:49988558-49988577 | None:intergenic | 50.0% | |
| GATGGAGGTCGTGGTAAACA+TGG | + | chr8_4:49988564-49988583 | None:intergenic | 50.0% | |
| ACTAGGTATGAGGTGGATGG+AGG | + | chr8_4:49988579-49988598 | None:intergenic | 50.0% | |
| TTCTGCCTCCAACAAATCGG+AGG | - | chr8_4:49989287-49989306 | Msa1330750:intron | 50.0% | |
| !! | TCGATCCTCCGATTTGTTGG+AGG | + | chr8_4:49989295-49989314 | None:intergenic | 50.0% |
| TTGATGGGACGCGAAGTTGA+AGG | + | chr8_4:49989363-49989382 | None:intergenic | 50.0% | |
| TCAACTTCGCGTCCCATCAA+TGG | - | chr8_4:49989363-49989382 | Msa1330750:intron | 50.0% | |
| TAGACTGGATATCCTCACCC+GGG | - | chr8_4:49989744-49989763 | Msa1330750:intron | 50.0% | |
| ACTTTACAACTTCGAGGCCC+CGG | + | chr8_4:49989765-49989784 | None:intergenic | 50.0% | |
| GTAAATTAGGGAGGAGGGGT+GGG | - | chr8_4:49989907-49989926 | Msa1330750:intron | 50.0% | |
| TTGTTGTGTGATCGATCGGG+AGG | - | chr8_4:49989955-49989974 | Msa1330750:intron | 50.0% | |
| TCAAGACCACCTTGCGGAAA+TGG | - | chr8_4:49990038-49990057 | Msa1330750:intron | 50.0% | |
| CCCTAAGAACCATTTCCGCA+AGG | + | chr8_4:49990050-49990069 | None:intergenic | 50.0% | |
| ATATGGAACCTACGCTCAGC+TGG | - | chr8_4:49990107-49990126 | Msa1330750:intron | 50.0% | |
| ACGTCCACACAAGCCTCTAT+CGG | + | chr8_4:49990135-49990154 | None:intergenic | 50.0% | |
| AGGCTTGTGTGGACGTTCTT+TGG | - | chr8_4:49990139-49990158 | Msa1330750:CDS | 50.0% | |
| GGCTTGTGTGGACGTTCTTT+GGG | - | chr8_4:49990140-49990159 | Msa1330750:CDS | 50.0% | |
| GCTTGTGTGGACGTTCTTTG+GGG | - | chr8_4:49990141-49990160 | Msa1330750:CDS | 50.0% | |
| CTTGTGTGGACGTTCTTTGG+GGG | - | chr8_4:49990142-49990161 | Msa1330750:CDS | 50.0% | |
| ! | GACGTTCTTTGGGGGATGTA+TGG | - | chr8_4:49990150-49990169 | Msa1330750:CDS | 50.0% |
| TTTGGGGGATGTATGGCCTT+GGG | - | chr8_4:49990157-49990176 | Msa1330750:CDS | 50.0% | |
| TCTGGTGCTTTCCTTGGGTT+TGG | - | chr8_4:49990226-49990245 | Msa1330750:CDS | 50.0% | |
| ! | GCTTTCCTTGGGTTTGGAGT+TGG | - | chr8_4:49990232-49990251 | Msa1330750:CDS | 50.0% |
| ! | TTCCTTGGGTTTGGAGTTGG+GGG | - | chr8_4:49990235-49990254 | Msa1330750:CDS | 50.0% |
| GAGTTTAGAGGGGAATCCCA+GGG | + | chr8_4:49990352-49990371 | None:intergenic | 50.0% | |
| AGAGTTTAGAGGGGAATCCC+AGG | + | chr8_4:49990353-49990372 | None:intergenic | 50.0% | |
| !! | CATTTATGCGTTGGCTGCAG+AGG | - | chr8_4:49990715-49990734 | Msa1330750:intron | 50.0% |
| AGTGAAGAGTCGGATGTGAG+TGG | - | chr8_4:49990752-49990771 | Msa1330750:intron | 50.0% | |
| !! | TCGGATGTGAGTGGTTCTGA+TGG | - | chr8_4:49990761-49990780 | Msa1330750:intron | 50.0% |
| !! | TGTGAGTGGTTCTGATGGAG+AGG | - | chr8_4:49990766-49990785 | Msa1330750:intron | 50.0% |
| CTGATGGAGAGGACACATCT+TGG | - | chr8_4:49990777-49990796 | Msa1330750:intron | 50.0% | |
| CTTGGCTGCTCAATCCACAA+AGG | + | chr8_4:49990880-49990899 | None:intergenic | 50.0% | |
| GAAGGAAAGCTCACCATGAG+AGG | + | chr8_4:49990948-49990967 | None:intergenic | 50.0% | |
| TCGGCAGCAGAGATGCTTTA+TGG | - | chr8_4:49991215-49991234 | Msa1330750:intron | 50.0% | |
| TGCCCAAGAGTTTACTGCTC+TGG | - | chr8_4:49991406-49991425 | Msa1330750:intron | 50.0% | |
| GACTGACCAACTGGAAGACA+GGG | + | chr8_4:49991436-49991455 | None:intergenic | 50.0% | |
| CTGTCTTCCAGTTGGTCAGT+CGG | - | chr8_4:49991435-49991454 | Msa1330750:intron | 50.0% | |
| TTGGTCAGTCGGACATTCCT+AGG | - | chr8_4:49991446-49991465 | Msa1330750:intron | 50.0% | |
| TGCATATGCATTATGGGGGC+AGG | - | chr8_4:49991981-49992000 | Msa1330750:intron | 50.0% | |
| GCATATGCATTATGGGGGCA+GGG | - | chr8_4:49991982-49992001 | Msa1330750:intron | 50.0% | |
| GTACTCCTTGCAGCATTCAG+CGG | - | chr8_4:49992761-49992780 | Msa1330750:intron | 50.0% | |
| TTGATCCGCTGAATGCTGCA+AGG | + | chr8_4:49992769-49992788 | None:intergenic | 50.0% | |
| ! | AGAATGCAATCGAGCACCGC+CGG | + | chr8_4:49986575-49986594 | None:intergenic | 55.0% |
| !! | ACGACACCGTCTGGTGTCAT+TGG | - | chr8_4:49986872-49986891 | Msa1330750:three_prime_UTR | 55.0% |
| !! | ACACCGTCTGGTGTCATTGG+TGG | - | chr8_4:49986875-49986894 | Msa1330750:three_prime_UTR | 55.0% |
| !! | CACCGTCTGGTGTCATTGGT+GGG | - | chr8_4:49986876-49986895 | Msa1330750:three_prime_UTR | 55.0% |
| TGGTGTGCAGTCAGTCTGGT+TGG | + | chr8_4:49987789-49987808 | None:intergenic | 55.0% | |
| AGGTTCACCCTCAACCTCGT+AGG | - | chr8_4:49988117-49988136 | Msa1330750:CDS | 55.0% | |
| ! | GCGCTTTTGACAACAGGGGT+TGG | + | chr8_4:49988195-49988214 | None:intergenic | 55.0% |
| ! | CCAGATCCATGGTTGGTTGG+TGG | + | chr8_4:49988412-49988431 | None:intergenic | 55.0% |
| CCACCAACCAACCATGGATC+TGG | - | chr8_4:49988409-49988428 | Msa1330750:intron | 55.0% | |
| GATGAGGCCAGACCTATGTG+TGG | + | chr8_4:49988542-49988561 | None:intergenic | 55.0% | |
| TATGAGGTGGATGGAGGTCG+TGG | + | chr8_4:49988573-49988592 | None:intergenic | 55.0% | |
| AGACTGGATATCCTCACCCG+GGG | - | chr8_4:49989745-49989764 | Msa1330750:intron | 55.0% | |
| CTTTACAACTTCGAGGCCCC+GGG | + | chr8_4:49989764-49989783 | None:intergenic | 55.0% | |
| GGTAAATTAGGGAGGAGGGG+TGG | - | chr8_4:49989906-49989925 | Msa1330750:intron | 55.0% | |
| !!! | GGGTGGGTTAGGTTGGCTTT+TGG | - | chr8_4:49989923-49989942 | Msa1330750:intron | 55.0% |
| TGTGATCGATCGGGAGGTCT+TGG | - | chr8_4:49989961-49989980 | Msa1330750:intron | 55.0% | |
| ! | CTTTGGGGGATGTATGGCCT+TGG | - | chr8_4:49990156-49990175 | Msa1330750:CDS | 55.0% |
| ! | TTGGGGGATGTATGGCCTTG+GGG | - | chr8_4:49990158-49990177 | Msa1330750:CDS | 55.0% |
| ! | TATGGCCTTGGGGGCTGATT+GGG | - | chr8_4:49990168-49990187 | Msa1330750:CDS | 55.0% |
| AACCCCCAACTCCAAACCCA+AGG | + | chr8_4:49990240-49990259 | None:intergenic | 55.0% | |
| ! | TGGGTTTGGAGTTGGGGGTT+TGG | - | chr8_4:49990240-49990259 | Msa1330750:CDS | 55.0% |
| GGACAACCCTGTCTTCCAGT+TGG | - | chr8_4:49991427-49991446 | Msa1330750:intron | 55.0% | |
| CGACTGACCAACTGGAAGAC+AGG | + | chr8_4:49991437-49991456 | None:intergenic | 55.0% | |
| GGAATGTCCGACTGACCAAC+TGG | + | chr8_4:49991445-49991464 | None:intergenic | 55.0% | |
| CTGCCTTGATACTTGGACCG+AGG | + | chr8_4:49991520-49991539 | None:intergenic | 55.0% | |
| AAGCCGCAGAAACCAGCTCA+GGG | - | chr8_4:49992629-49992648 | Msa1330750:intron | 55.0% | |
| ! | TAGCCCTGAGCTGGTTTCTG+CGG | + | chr8_4:49992635-49992654 | None:intergenic | 55.0% |
| ! | GAATGCAATCGAGCACCGCC+GGG | + | chr8_4:49986574-49986593 | None:intergenic | 60.0% |
| ATGAGGGAAGCGAGGAGCGA+CGG | + | chr8_4:49986620-49986639 | None:intergenic | 60.0% | |
| CGCCCACCAATGACACCAGA+CGG | + | chr8_4:49986881-49986900 | None:intergenic | 60.0% | |
| GAGGCCAGACCTATGTGTGG+TGG | + | chr8_4:49988539-49988558 | None:intergenic | 60.0% | |
| ! | TTAGGGAGGAGGGGTGGGTT+AGG | - | chr8_4:49989912-49989931 | Msa1330750:intron | 60.0% |
| !! | TATCGGTGCCAGCTGAGCGT+AGG | + | chr8_4:49990118-49990137 | None:intergenic | 60.0% |
| !! | GGCACCGATAGAGGCTTGTG+TGG | - | chr8_4:49990128-49990147 | Msa1330750:intron | 60.0% |
| ! | TGGGGGATGTATGGCCTTGG+GGG | - | chr8_4:49990159-49990178 | Msa1330750:CDS | 60.0% |
| ! | GTATGGCCTTGGGGGCTGAT+TGG | - | chr8_4:49990167-49990186 | Msa1330750:CDS | 60.0% |
| AGACACCCAATCAGCCCCCA+AGG | + | chr8_4:49990176-49990195 | None:intergenic | 60.0% | |
| ! | GGGGGTTTGGCAGCTTGTTC+TGG | - | chr8_4:49990253-49990272 | Msa1330750:CDS | 60.0% |
| GAAGCCGCAGAAACCAGCTC+AGG | - | chr8_4:49992628-49992647 | Msa1330750:intron | 60.0% | |
| CTTGGAACGTAGCCCTGAGC+TGG | + | chr8_4:49992644-49992663 | None:intergenic | 60.0% | |
| AGTTCCTCCTTCCGCCGTCC+CGG | - | chr8_4:49986553-49986572 | Msa1330750:three_prime_UTR | 65.0% | |
| CGACGGCGGAGACAAACCAG+TGG | + | chr8_4:49986603-49986622 | None:intergenic | 65.0% | |
| !! | GGAGGAGGGGTGGGTTAGGT+TGG | - | chr8_4:49989916-49989935 | Msa1330750:intron | 65.0% |
| !! | CGCTCAGCTGGCACCGATAG+AGG | - | chr8_4:49990119-49990138 | Msa1330750:intron | 65.0% |
| GGGGGCAGGGCTGATGATCT+AGG | - | chr8_4:49991995-49992014 | Msa1330750:intron | 65.0% | |
| ! | GCAATCGAGCACCGCCGGGA+CGG | + | chr8_4:49986570-49986589 | None:intergenic | 70.0% |
| AGGGAAGCGAGGAGCGACGG+CGG | + | chr8_4:49986617-49986636 | None:intergenic | 70.0% | |
| CAACTTCGAGGCCCCGGGTG+AGG | + | chr8_4:49989759-49989778 | None:intergenic | 70.0% | |
| TCCTCCTTCCGCCGTCCCGG+CGG | - | chr8_4:49986556-49986575 | Msa1330750:three_prime_UTR | 75.0% | |
| ! | ATCGAGCACCGCCGGGACGG+CGG | + | chr8_4:49986567-49986586 | None:intergenic | 75.0% |
| ! | ACCGCCGGGACGGCGGAAGG+AGG | + | chr8_4:49986560-49986579 | None:intergenic | 80.0% |
| ! | AGCACCGCCGGGACGGCGGA+AGG | + | chr8_4:49986563-49986582 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 49986512 | 49993087 | 49986512 | ID=Msa1330750;Name=Msa1330750 |
| chr8_4 | mRNA | 49986512 | 49993087 | 49986512 | ID=Msa1330750-mRNA-1;Parent=Msa1330750;Name=Msa1330750-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0.57|0.5|0.75|1|1|8|393|384 |
| chr8_4 | exon | 49986512 | 49987035 | 49986512 | ID=Msa1330750-mRNA-1:exon:14585;Parent=Msa1330750-mRNA-1 |
| chr8_4 | exon | 49988061 | 49988226 | 49988061 | ID=Msa1330750-mRNA-1:exon:14584;Parent=Msa1330750-mRNA-1 |
| chr8_4 | exon | 49988313 | 49988422 | 49988313 | ID=Msa1330750-mRNA-1:exon:14583;Parent=Msa1330750-mRNA-1 |
| chr8_4 | exon | 49988646 | 49988864 | 49988646 | ID=Msa1330750-mRNA-1:exon:14582;Parent=Msa1330750-mRNA-1 |
| chr8_4 | exon | 49990134 | 49990357 | 49990134 | ID=Msa1330750-mRNA-1:exon:14581;Parent=Msa1330750-mRNA-1 |
| chr8_4 | exon | 49990425 | 49990525 | 49990425 | ID=Msa1330750-mRNA-1:exon:14580;Parent=Msa1330750-mRNA-1 |
| chr8_4 | exon | 49992715 | 49992765 | 49992715 | ID=Msa1330750-mRNA-1:exon:14579;Parent=Msa1330750-mRNA-1 |
| chr8_4 | exon | 49992935 | 49993087 | 49992935 | ID=Msa1330750-mRNA-1:exon:14578;Parent=Msa1330750-mRNA-1 |
| chr8_4 | CDS | 49992935 | 49993087 | 49992935 | ID=Msa1330750-mRNA-1:cds;Parent=Msa1330750-mRNA-1 |
| chr8_4 | CDS | 49992715 | 49992765 | 49992715 | ID=Msa1330750-mRNA-1:cds;Parent=Msa1330750-mRNA-1 |
| chr8_4 | CDS | 49990425 | 49990525 | 49990425 | ID=Msa1330750-mRNA-1:cds;Parent=Msa1330750-mRNA-1 |
| chr8_4 | CDS | 49990134 | 49990357 | 49990134 | ID=Msa1330750-mRNA-1:cds;Parent=Msa1330750-mRNA-1 |
| chr8_4 | CDS | 49988646 | 49988864 | 49988646 | ID=Msa1330750-mRNA-1:cds;Parent=Msa1330750-mRNA-1 |
| chr8_4 | CDS | 49988313 | 49988422 | 49988313 | ID=Msa1330750-mRNA-1:cds;Parent=Msa1330750-mRNA-1 |
| chr8_4 | CDS | 49988061 | 49988226 | 49988061 | ID=Msa1330750-mRNA-1:cds;Parent=Msa1330750-mRNA-1 |
| chr8_4 | CDS | 49986905 | 49987035 | 49986905 | ID=Msa1330750-mRNA-1:cds;Parent=Msa1330750-mRNA-1 |
| chr8_4 | three_prime_UTR | 49986512 | 49986904 | 49986512 | ID=Msa1330750-mRNA-1:three_prime_utr;Parent=Msa1330750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
