AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1256820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1256820 MtrunA17_Chr4g0055361 97.445 274 1 2 1 274 1 268 0.0 548
Msa1256820 MtrunA17_Chr5g0399951 81.560 282 43 3 1 274 1 281 6.51e-168 466
Msa1256820 MtrunA17_Chr1g0153861 98.630 73 1 0 67 139 48 120 7.91e-46 150
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1256820 AT5G47080.1 75.601 291 50 4 1 274 1 287 4.02e-157 439
Msa1256820 AT4G17640.1 75.874 286 53 5 1 274 1 282 1.49e-156 437
Msa1256820 AT2G44680.1 78.378 259 50 2 15 272 27 280 6.83e-154 431
Msa1256820 AT5G47080.4 74.227 291 49 5 1 274 1 282 3.43e-151 424
Msa1256820 AT4G17640.2 74.476 286 52 6 1 274 1 277 1.23e-150 422
Msa1256820 AT2G44680.2 77.606 259 51 3 15 272 27 279 1.92e-150 422
Msa1256820 AT3G60250.1 74.809 262 55 2 15 274 24 276 1.20e-143 404
Msa1256820 AT3G60250.2 74.046 262 56 3 15 274 24 275 3.74e-140 395
Msa1256820 AT5G47080.2 73.600 250 45 4 1 233 1 246 9.05e-127 361
Msa1256820 AT5G47080.3 73.684 247 47 4 1 233 1 243 4.49e-126 359
Msa1256820 AT2G44680.3 77.273 220 44 2 15 233 27 241 1.01e-123 353
Msa1256820 AT3G60250.3 72.398 221 50 2 15 233 24 235 1.57e-111 322

Find 90 sgRNAs with CRISPR-Local

Find 618 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTTATTATTGGTCAAAATT+AGG 0.097350 8_2:+57078234 Msa1256820:five_prime_UTR
GACATTGATGGAGCTTATTT+TGG 0.142336 8_2:+57081577 Msa1256820:intron
TTGTTTATTGTAGGTAAAAT+TGG 0.166521 8_2:+57078075 Msa1256820:five_prime_UTR
TTTAGGATTATTCTTATTAT+TGG 0.182218 8_2:+57078223 Msa1256820:five_prime_UTR
TTATGCTCTTGATTTGATTT+TGG 0.200069 8_2:+57079928 Msa1256820:CDS
TCCAAAACTGCCAATATTTC+TGG 0.210478 8_2:+57078458 Msa1256820:CDS
CTTATTATTGGTCAAAATTA+GGG 0.221847 8_2:+57078235 Msa1256820:five_prime_UTR
ACCAGAAATATTGGCAGTTT+TGG 0.225014 8_2:-57078459 None:intergenic
GTCTTGTTACAAATTGTATT+TGG 0.226587 8_2:+57081960 Msa1256820:three_prime_UTR
CAAGATGACTTCAACCTTTG+TGG 0.289031 8_2:+57079878 Msa1256820:CDS
TCGGCAGCAGAGATGCTTTA+TGG 0.294830 8_2:+57080229 Msa1256820:CDS
CTTTCGATCCTCCGATTTGT+TGG 0.309378 8_2:-57078309 None:intergenic
TTTGAGACACAAAGTGTGTT+AGG 0.310519 8_2:-57078120 None:intergenic
AGCTTAAACTTCCAGCTTCA+TGG 0.333527 8_2:-57081703 None:intergenic
ATTGGTTTCTCTCTCTTTGT+TGG 0.347659 8_2:-57078405 None:intergenic
GAAATGGGTACCAGAAATAT+TGG 0.362437 8_2:-57078468 None:intergenic
AAGGGGATCCTTGATGGTAT+TGG 0.386002 8_2:-57078423 None:intergenic
TTAAAACGGAAATGAGATAA+TGG 0.387282 8_2:-57082045 None:intergenic
TAAGCTTTCATGAAAGTAAG+AGG 0.390464 8_2:+57081720 Msa1256820:three_prime_UTR
ATATATCCTTCTACCTTAGC+TGG 0.393064 8_2:-57078180 None:intergenic
TCAACTTAAGCAAAGGTAGT+AGG 0.401566 8_2:-57078003 None:intergenic
TGTTTATTGTAGGTAAAATT+GGG 0.403706 8_2:+57078076 Msa1256820:five_prime_UTR
CACCTCTTCTTGATGACATA+TGG 0.412631 8_2:+57081613 Msa1256820:CDS
CACAAAGGTTGAAGTCATCT+TGG 0.419737 8_2:-57079877 None:intergenic
AAGGATACTGCCTTGATACT+TGG 0.428282 8_2:-57080538 None:intergenic
TGACTCTGTCTAGACATTGA+TGG 0.431052 8_2:+57081565 Msa1256820:intron
TTGAAGAAGGGGATCCTTGA+TGG 0.447132 8_2:-57078429 None:intergenic
TCCACAAATTCAACTTAAAA+CGG 0.452059 8_2:-57082059 None:intergenic
TGCCCAAGAGTTTACTGCTC+TGG 0.452889 8_2:+57080420 Msa1256820:CDS
CGACTGACCAACTGGAAGAC+AGG 0.459035 8_2:-57080448 None:intergenic
GGAATGTCCGACTGACCAAC+TGG 0.459318 8_2:-57080456 None:intergenic
TGTCCAGAGCAGTAAACTCT+TGG 0.459857 8_2:-57080423 None:intergenic
TTGGTCAGTCGGACATTCCT+AGG 0.467923 8_2:+57080460 Msa1256820:CDS
CGCTCCTAAAACAAGTAAAA+CGG 0.469487 8_2:-57081833 None:intergenic
AACTTCACAAGCCATGAAGC+TGG 0.476442 8_2:+57081692 Msa1256820:exon
CTCATTTAACTCTTCTGTTG+TGG 0.480534 8_2:+57081753 Msa1256820:three_prime_UTR
TTGAGACACAAAGTGTGTTA+GGG 0.480729 8_2:-57078119 None:intergenic
TCAAGAGCATAATCATAGTA+AGG 0.480913 8_2:-57079917 None:intergenic
TTAGCTGGGAAAATGCCTTT+CGG 0.485073 8_2:-57078165 None:intergenic
ACAAAACGAGTTAATTGAAT+CGG 0.485282 8_2:+57080210 Msa1256820:CDS
TCAACTTCGCGTCCCATCAA+TGG 0.485312 8_2:+57078377 Msa1256820:CDS
AAGCAAAGGAATGGCTGCTA+TGG 0.494974 8_2:+57080279 Msa1256820:CDS
GAAGCCGCAGAAACCAGCTC+AGG 0.495797 8_2:+57081642 Msa1256820:CDS
CTGATGGAGAGGACACATCT+TGG 0.496739 8_2:+57079792 Msa1256820:CDS
GTGAAGATCTTTATTATCCT+CGG 0.499504 8_2:+57080514 Msa1256820:CDS
CAGAAGAGTTAAATGAGATT+CGG 0.501653 8_2:-57081747 None:intergenic
CTTGGAACGTAGCCCTGAGC+TGG 0.505575 8_2:-57081655 None:intergenic
AAGTACAAGAACTATGACTT+TGG 0.513375 8_2:+57080393 Msa1256820:CDS
AATTCAATGAGCAAGTGCTT+AGG 0.513437 8_2:+57081916 Msa1256820:three_prime_UTR
TGGTTCTGCCTCCAACAAAT+CGG 0.517982 8_2:+57078298 Msa1256820:CDS
AGGACACATCTTGGATCTCA+TGG 0.519032 8_2:+57079801 Msa1256820:CDS
GTCTCAAATCTACAACCAAA+AGG 0.520752 8_2:+57078135 Msa1256820:five_prime_UTR
TCGATCCTCCGATTTGTTGG+AGG 0.523491 8_2:-57078306 None:intergenic
GTCCAGAGCAGTAAACTCTT+GGG 0.524198 8_2:-57080422 None:intergenic
TTGGATGTTGAATCCTCTCA+TGG 0.536194 8_2:+57079947 Msa1256820:CDS
TATCCTCGGTCCAAGTATCA+AGG 0.539508 8_2:+57080528 Msa1256820:CDS
CTAATTCTCAACTTAAGCAA+AGG 0.539634 8_2:-57078010 None:intergenic
TTGGAGGATCGTTGAAGAAG+GGG 0.542487 8_2:-57078440 None:intergenic
TTTGGAGGATCGTTGAAGAA+GGG 0.542634 8_2:-57078441 None:intergenic
TCGGATGTGAGTGGTTCTGA+TGG 0.547426 8_2:+57079776 Msa1256820:CDS
TTGATGGGACGCGAAGTTGA+AGG 0.555193 8_2:-57078374 None:intergenic
CATATTGACAAGCAAAGGAA+TGG 0.559392 8_2:+57080270 Msa1256820:CDS
TAATAAAGATCTTCACACCT+AGG 0.564469 8_2:-57080507 None:intergenic
CTGTGAAAATATATTGCCCT+AGG 0.570529 8_2:+57080490 Msa1256820:CDS
GGACAACCCTGTCTTCCAGT+TGG 0.581204 8_2:+57080441 Msa1256820:CDS
TATATCCTTCTACCTTAGCT+GGG 0.584299 8_2:-57078179 None:intergenic
GAGAGAAACCAATACCATCA+AGG 0.584389 8_2:+57078415 Msa1256820:CDS
CATAATCATAGTAAGGCACT+TGG 0.585754 8_2:-57079910 None:intergenic
GTCCATATGTCATCAAGAAG+AGG 0.586772 8_2:-57081615 None:intergenic
TTGAAGCTGAAAGTGAAACT+AGG 0.589169 8_2:-57081894 None:intergenic
GAAGGAAAGCTCACCATGAG+AGG 0.595315 8_2:-57079960 None:intergenic
CTGTCTTCCAGTTGGTCAGT+CGG 0.596296 8_2:+57080449 Msa1256820:CDS
CGTTACATATTGACAAGCAA+AGG 0.597579 8_2:+57080265 Msa1256820:CDS
AATAAAGATCTTCACACCTA+GGG 0.602100 8_2:-57080506 None:intergenic
TATGTCATCAAGAAGAGGTG+TGG 0.608315 8_2:-57081610 None:intergenic
TGAAACAGACAGTGAAGAGT+CGG 0.609801 8_2:+57079757 Msa1256820:CDS
TTGATCCGCTGAATGCTGCA+AGG 0.612618 8_2:-57081780 None:intergenic
GTACTCCTTGCAGCATTCAG+CGG 0.625181 8_2:+57081775 Msa1256820:three_prime_UTR
TAGCCCTGAGCTGGTTTCTG+CGG 0.627243 8_2:-57081646 None:intergenic
AAGCCGCAGAAACCAGCTCA+GGG 0.638099 8_2:+57081643 Msa1256820:CDS
GACTGACCAACTGGAAGACA+GGG 0.638452 8_2:-57080447 None:intergenic
CTGCCTTGATACTTGGACCG+AGG 0.643410 8_2:-57080531 None:intergenic
AGTGAAGAGTCGGATGTGAG+TGG 0.651799 8_2:+57079767 Msa1256820:CDS
CCAAAAGGAAAATAGCCGAA+AGG 0.654665 8_2:+57078150 Msa1256820:five_prime_UTR
AAAATGTACAAAGGTCGTGG+TGG 0.670283 8_2:+57078278 Msa1256820:exon
CTTGGCTGCTCAATCCACAA+AGG 0.670694 8_2:-57079892 None:intergenic
TTCTGCCTCCAACAAATCGG+AGG 0.672720 8_2:+57078301 Msa1256820:CDS
TCATGGTTCTGCAATCTCAG+AGG 0.675059 8_2:+57079818 Msa1256820:CDS
TGTGAGTGGTTCTGATGGAG+AGG 0.687843 8_2:+57079781 Msa1256820:CDS
CATAGGTGATATGTTCACAG+AGG 0.751923 8_2:+57080186 Msa1256820:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTGTGATTTTTTTTT+GGG + chr8_2:57078578-57078597 Msa1256820:intron 10.0%
!! TAATTAAGTTTGATTAATTT+AGG + chr8_2:57078677-57078696 Msa1256820:intron 10.0%
!! AGAAAGAAAAAAAAAAAATT+GGG - chr8_2:57078821-57078840 None:intergenic 10.0%
!!! AATTTTTTTTTTTTCTTTCT+GGG + chr8_2:57078821-57078840 Msa1256820:intron 10.0%
!!! ATCATTTTTTTTTTTTTGAA+TGG - chr8_2:57079430-57079449 None:intergenic 10.0%
!! AAAATAAAAAATAACTGAAA+AGG - chr8_2:57080132-57080151 None:intergenic 10.0%
!!! TAATTTTGTGATTTTTTTTT+GGG + chr8_2:57078578-57078597 Msa1256820:intron 10.0%
!! TAATTAAGTTTGATTAATTT+AGG + chr8_2:57078677-57078696 Msa1256820:intron 10.0%
!! AGAAAGAAAAAAAAAAAATT+GGG - chr8_2:57078821-57078840 None:intergenic 10.0%
!!! AATTTTTTTTTTTTCTTTCT+GGG + chr8_2:57078821-57078840 Msa1256820:intron 10.0%
!!! ATCATTTTTTTTTTTTTGAA+TGG - chr8_2:57079430-57079449 None:intergenic 10.0%
!! AAAATAAAAAATAACTGAAA+AGG - chr8_2:57080132-57080151 None:intergenic 10.0%
!!! ATCATGATATAATTGATTTT+AGG + chr8_2:57078206-57078225 Msa1256820:five_prime_UTR 15.0%
!!! TTTAGGATTATTCTTATTAT+TGG + chr8_2:57078223-57078242 Msa1256820:five_prime_UTR 15.0%
!!! GAAATTAAAGATTTTGAATA+CGG - chr8_2:57078519-57078538 None:intergenic 15.0%
!! CAAAAAAAAATCACAAAATT+AGG - chr8_2:57078579-57078598 None:intergenic 15.0%
!!! CTAATTTTGTGATTTTTTTT+TGG + chr8_2:57078577-57078596 Msa1256820:intron 15.0%
!! CAGAAAGAAAAAAAAAAAAT+TGG - chr8_2:57078822-57078841 None:intergenic 15.0%
!!! CAATTTTTTTTTTTTCTTTC+TGG + chr8_2:57078820-57078839 Msa1256820:intron 15.0%
!! ATCTATAAAGAAATAAACAA+AGG - chr8_2:57079396-57079415 None:intergenic 15.0%
!!! AAAATATCCTTTATTTGAAA+GGG - chr8_2:57079571-57079590 None:intergenic 15.0%
!!! AAAAATATCCTTTATTTGAA+AGG - chr8_2:57079572-57079591 None:intergenic 15.0%
!!! TATTGAATTTTATTTTGTCA+TGG + chr8_2:57080574-57080593 Msa1256820:intron 15.0%
!!! TATTTTTTAGTATACCATTA+TGG - chr8_2:57080955-57080974 None:intergenic 15.0%
!!! TTTTGGAATTGTAAATTTTT+TGG + chr8_2:57081227-57081246 Msa1256820:intron 15.0%
!! ATATCATGATTAAAAAACTA+TGG - chr8_2:57081442-57081461 None:intergenic 15.0%
!! ATGATATTTATATTAACACT+GGG + chr8_2:57081455-57081474 Msa1256820:intron 15.0%
!!! ATCATGATATAATTGATTTT+AGG + chr8_2:57078206-57078225 Msa1256820:five_prime_UTR 15.0%
!!! TTTAGGATTATTCTTATTAT+TGG + chr8_2:57078223-57078242 Msa1256820:five_prime_UTR 15.0%
!!! GAAATTAAAGATTTTGAATA+CGG - chr8_2:57078519-57078538 None:intergenic 15.0%
!! CAAAAAAAAATCACAAAATT+AGG - chr8_2:57078579-57078598 None:intergenic 15.0%
!!! CTAATTTTGTGATTTTTTTT+TGG + chr8_2:57078577-57078596 Msa1256820:intron 15.0%
!! CAGAAAGAAAAAAAAAAAAT+TGG - chr8_2:57078822-57078841 None:intergenic 15.0%
!!! CAATTTTTTTTTTTTCTTTC+TGG + chr8_2:57078820-57078839 Msa1256820:intron 15.0%
!! ATCTATAAAGAAATAAACAA+AGG - chr8_2:57079396-57079415 None:intergenic 15.0%
!!! AAAATATCCTTTATTTGAAA+GGG - chr8_2:57079571-57079590 None:intergenic 15.0%
!!! AAAAATATCCTTTATTTGAA+AGG - chr8_2:57079572-57079591 None:intergenic 15.0%
!!! TATTGAATTTTATTTTGTCA+TGG + chr8_2:57080574-57080593 Msa1256820:intron 15.0%
!!! TATTTTTTAGTATACCATTA+TGG - chr8_2:57080955-57080974 None:intergenic 15.0%
!!! TTTTGGAATTGTAAATTTTT+TGG + chr8_2:57081227-57081246 Msa1256820:intron 15.0%
!! ATATCATGATTAAAAAACTA+TGG - chr8_2:57081442-57081461 None:intergenic 15.0%
!! ATGATATTTATATTAACACT+GGG + chr8_2:57081455-57081474 Msa1256820:intron 15.0%
!!! AATTGTGTTTTGTTTATTGT+AGG + chr8_2:57078066-57078085 Msa1256820:five_prime_UTR 20.0%
!! TTGTTTATTGTAGGTAAAAT+TGG + chr8_2:57078075-57078094 Msa1256820:five_prime_UTR 20.0%
!! TGTTTATTGTAGGTAAAATT+GGG + chr8_2:57078076-57078095 Msa1256820:five_prime_UTR 20.0%
!! TCTTATTATTGGTCAAAATT+AGG + chr8_2:57078234-57078253 Msa1256820:five_prime_UTR 20.0%
!! CTTATTATTGGTCAAAATTA+GGG + chr8_2:57078235-57078254 Msa1256820:five_prime_UTR 20.0%
!!! AATAGTTTTGGATAAGAAAT+GGG - chr8_2:57078486-57078505 None:intergenic 20.0%
!! AATTAGGTCATAAAAAAAGA+GGG - chr8_2:57078563-57078582 None:intergenic 20.0%
!! AAATTAGGTCATAAAAAAAG+AGG - chr8_2:57078564-57078583 None:intergenic 20.0%
!! CTATAATGTACTATAAAGTA+TGG + chr8_2:57078849-57078868 Msa1256820:intron 20.0%
!! ACTCTAAACAAAAACATTAA+CGG - chr8_2:57079333-57079352 None:intergenic 20.0%
!! ATAAATCCAACAAAATATGA+AGG - chr8_2:57079981-57080000 None:intergenic 20.0%
!! ACTTAACTTTGATTCTTATT+TGG + chr8_2:57080047-57080066 Msa1256820:intron 20.0%
!! TCAATAATTGATATGTCATA+AGG - chr8_2:57080560-57080579 None:intergenic 20.0%
!! TAAAAATACCTATACCTAAA+AGG - chr8_2:57080740-57080759 None:intergenic 20.0%
!!! ACTACAAACTCAATAAATTT+TGG + chr8_2:57080874-57080893 Msa1256820:intron 20.0%
!! AATTTACAATTCCAAAAAAC+TGG - chr8_2:57081224-57081243 None:intergenic 20.0%
!! CACAATAATGTTAAGAAATT+TGG + chr8_2:57081355-57081374 Msa1256820:intron 20.0%
!! CATGATATTTATATTAACAC+TGG + chr8_2:57081454-57081473 Msa1256820:intron 20.0%
!!! TATATTTTACTGGTTTGAAA+AGG - chr8_2:57081808-57081827 None:intergenic 20.0%
!!! AATTGTGTTTTGTTTATTGT+AGG + chr8_2:57078066-57078085 Msa1256820:five_prime_UTR 20.0%
!! TTGTTTATTGTAGGTAAAAT+TGG + chr8_2:57078075-57078094 Msa1256820:five_prime_UTR 20.0%
!! TGTTTATTGTAGGTAAAATT+GGG + chr8_2:57078076-57078095 Msa1256820:five_prime_UTR 20.0%
!! TCTTATTATTGGTCAAAATT+AGG + chr8_2:57078234-57078253 Msa1256820:five_prime_UTR 20.0%
!! CTTATTATTGGTCAAAATTA+GGG + chr8_2:57078235-57078254 Msa1256820:five_prime_UTR 20.0%
!!! AATAGTTTTGGATAAGAAAT+GGG - chr8_2:57078486-57078505 None:intergenic 20.0%
!! AATTAGGTCATAAAAAAAGA+GGG - chr8_2:57078563-57078582 None:intergenic 20.0%
!! AAATTAGGTCATAAAAAAAG+AGG - chr8_2:57078564-57078583 None:intergenic 20.0%
!! CTATAATGTACTATAAAGTA+TGG + chr8_2:57078849-57078868 Msa1256820:intron 20.0%
!! ACTCTAAACAAAAACATTAA+CGG - chr8_2:57079333-57079352 None:intergenic 20.0%
!! ATAAATCCAACAAAATATGA+AGG - chr8_2:57079981-57080000 None:intergenic 20.0%
!! ACTTAACTTTGATTCTTATT+TGG + chr8_2:57080047-57080066 Msa1256820:intron 20.0%
!! TCAATAATTGATATGTCATA+AGG - chr8_2:57080560-57080579 None:intergenic 20.0%
!! TAAAAATACCTATACCTAAA+AGG - chr8_2:57080740-57080759 None:intergenic 20.0%
!!! ACTACAAACTCAATAAATTT+TGG + chr8_2:57080874-57080893 Msa1256820:intron 20.0%
!! AATTTACAATTCCAAAAAAC+TGG - chr8_2:57081224-57081243 None:intergenic 20.0%
!! CACAATAATGTTAAGAAATT+TGG + chr8_2:57081355-57081374 Msa1256820:intron 20.0%
!! CATGATATTTATATTAACAC+TGG + chr8_2:57081454-57081473 Msa1256820:intron 20.0%
!!! TATATTTTACTGGTTTGAAA+AGG - chr8_2:57081808-57081827 None:intergenic 20.0%
! TTCGAAGAAAAAATGTACAA+AGG + chr8_2:57078269-57078288 Msa1256820:exon 25.0%
!!! GAATAGTTTTGGATAAGAAA+TGG - chr8_2:57078487-57078506 None:intergenic 25.0%
!! GGAAACATAAAGAATAGTTT+TGG - chr8_2:57078498-57078517 None:intergenic 25.0%
!!! TTTTTGGGAATTTTTGTTTG+TGG + chr8_2:57078593-57078612 Msa1256820:intron 25.0%
! TACCCTAATATGATTGAATT+GGG + chr8_2:57078636-57078655 Msa1256820:intron 25.0%
! ATCCCAATTCAATCATATTA+GGG - chr8_2:57078641-57078660 None:intergenic 25.0%
! AATCCCAATTCAATCATATT+AGG - chr8_2:57078642-57078661 None:intergenic 25.0%
!! TTTTAGACTAGTGGAATATT+TGG + chr8_2:57078713-57078732 Msa1256820:intron 25.0%
! TTTAGACTAGTGGAATATTT+GGG + chr8_2:57078714-57078733 Msa1256820:intron 25.0%
!! TGAGAGTATGATATTATTTG+CGG + chr8_2:57079616-57079635 Msa1256820:intron 25.0%
!!! TTATGCTCTTGATTTGATTT+TGG + chr8_2:57079928-57079947 Msa1256820:CDS 25.0%
! ATGGTTTAATTGGAATTCAT+AGG + chr8_2:57080169-57080188 Msa1256820:intron 25.0%
! ACAAAACGAGTTAATTGAAT+CGG + chr8_2:57080210-57080229 Msa1256820:CDS 25.0%
! TAATTAAGTAGTGTGTTTGT+AGG + chr8_2:57080708-57080727 Msa1256820:intron 25.0%
!! AGAAAAAAATGATTTGCATG+TGG + chr8_2:57080807-57080826 Msa1256820:intron 25.0%
!! GAAAAAAATGATTTGCATGT+GGG + chr8_2:57080808-57080827 Msa1256820:intron 25.0%
! TTTGTAGTAGTTCAAACATA+TGG - chr8_2:57080862-57080881 None:intergenic 25.0%
! TGAAAATATTTCTTGTGCTT+GGG + chr8_2:57080897-57080916 Msa1256820:intron 25.0%
! TATGCAAGATATTCATTGTA+TGG - chr8_2:57080981-57081000 None:intergenic 25.0%
! AATATCTTGCATATGCATTA+TGG + chr8_2:57080988-57081007 Msa1256820:intron 25.0%
! ATATCTTGCATATGCATTAT+GGG + chr8_2:57080989-57081008 Msa1256820:intron 25.0%
!!! TTTTCTGAAAGAAGGAAAAA+TGG - chr8_2:57081096-57081115 None:intergenic 25.0%
!!! AGATATAGTTTTCTGAAAGA+AGG - chr8_2:57081104-57081123 None:intergenic 25.0%
! AACATTAGACAAAAAACAGA+AGG - chr8_2:57081260-57081279 None:intergenic 25.0%
! GAAATCAAGCTTAAAAACAA+TGG - chr8_2:57081381-57081400 None:intergenic 25.0%
! TATTTATATTAACACTGGGA+TGG + chr8_2:57081459-57081478 Msa1256820:intron 25.0%
!! GTTTTATGATATTCATGTTC+TGG + chr8_2:57081481-57081500 Msa1256820:intron 25.0%
! ATAATTGTGGTTAGAATTGT+TGG + chr8_2:57081508-57081527 Msa1256820:intron 25.0%
!! GTCTTGTTACAAATTGTATT+TGG + chr8_2:57081960-57081979 Msa1256820:three_prime_UTR 25.0%
! ATCAGAGACAAAAAACATAA+AGG - chr8_2:57081992-57082011 None:intergenic 25.0%
! TTAAAACGGAAATGAGATAA+TGG - chr8_2:57082048-57082067 None:intergenic 25.0%
! TCCACAAATTCAACTTAAAA+CGG - chr8_2:57082062-57082081 None:intergenic 25.0%
! TTCGAAGAAAAAATGTACAA+AGG + chr8_2:57078269-57078288 Msa1256820:exon 25.0%
!!! GAATAGTTTTGGATAAGAAA+TGG - chr8_2:57078487-57078506 None:intergenic 25.0%
!! GGAAACATAAAGAATAGTTT+TGG - chr8_2:57078498-57078517 None:intergenic 25.0%
!!! TTTTTGGGAATTTTTGTTTG+TGG + chr8_2:57078593-57078612 Msa1256820:intron 25.0%
! TACCCTAATATGATTGAATT+GGG + chr8_2:57078636-57078655 Msa1256820:intron 25.0%
! ATCCCAATTCAATCATATTA+GGG - chr8_2:57078641-57078660 None:intergenic 25.0%
! AATCCCAATTCAATCATATT+AGG - chr8_2:57078642-57078661 None:intergenic 25.0%
!! TTTTAGACTAGTGGAATATT+TGG + chr8_2:57078713-57078732 Msa1256820:intron 25.0%
! TTTAGACTAGTGGAATATTT+GGG + chr8_2:57078714-57078733 Msa1256820:intron 25.0%
!! TGAGAGTATGATATTATTTG+CGG + chr8_2:57079616-57079635 Msa1256820:intron 25.0%
!!! TTATGCTCTTGATTTGATTT+TGG + chr8_2:57079928-57079947 Msa1256820:CDS 25.0%
! ATGGTTTAATTGGAATTCAT+AGG + chr8_2:57080169-57080188 Msa1256820:intron 25.0%
! ACAAAACGAGTTAATTGAAT+CGG + chr8_2:57080210-57080229 Msa1256820:CDS 25.0%
! TAATTAAGTAGTGTGTTTGT+AGG + chr8_2:57080708-57080727 Msa1256820:intron 25.0%
!! AGAAAAAAATGATTTGCATG+TGG + chr8_2:57080807-57080826 Msa1256820:intron 25.0%
!! GAAAAAAATGATTTGCATGT+GGG + chr8_2:57080808-57080827 Msa1256820:intron 25.0%
! TTTGTAGTAGTTCAAACATA+TGG - chr8_2:57080862-57080881 None:intergenic 25.0%
! TGAAAATATTTCTTGTGCTT+GGG + chr8_2:57080897-57080916 Msa1256820:intron 25.0%
! TATGCAAGATATTCATTGTA+TGG - chr8_2:57080981-57081000 None:intergenic 25.0%
! AATATCTTGCATATGCATTA+TGG + chr8_2:57080988-57081007 Msa1256820:intron 25.0%
! ATATCTTGCATATGCATTAT+GGG + chr8_2:57080989-57081008 Msa1256820:intron 25.0%
!!! TTTTCTGAAAGAAGGAAAAA+TGG - chr8_2:57081096-57081115 None:intergenic 25.0%
!!! AGATATAGTTTTCTGAAAGA+AGG - chr8_2:57081104-57081123 None:intergenic 25.0%
! AACATTAGACAAAAAACAGA+AGG - chr8_2:57081260-57081279 None:intergenic 25.0%
! GAAATCAAGCTTAAAAACAA+TGG - chr8_2:57081381-57081400 None:intergenic 25.0%
! TATTTATATTAACACTGGGA+TGG + chr8_2:57081459-57081478 Msa1256820:intron 25.0%
!! GTTTTATGATATTCATGTTC+TGG + chr8_2:57081481-57081500 Msa1256820:intron 25.0%
! ATAATTGTGGTTAGAATTGT+TGG + chr8_2:57081508-57081527 Msa1256820:intron 25.0%
!! GTCTTGTTACAAATTGTATT+TGG + chr8_2:57081960-57081979 Msa1256820:three_prime_UTR 25.0%
! ATCAGAGACAAAAAACATAA+AGG - chr8_2:57081992-57082011 None:intergenic 25.0%
! TTAAAACGGAAATGAGATAA+TGG - chr8_2:57082048-57082067 None:intergenic 25.0%
! TCCACAAATTCAACTTAAAA+CGG - chr8_2:57082062-57082081 None:intergenic 25.0%
CTAATTCTCAACTTAAGCAA+AGG - chr8_2:57078013-57078032 None:intergenic 30.0%
!!! AGGGTTTTTGTTTTTGATGA+GGG - chr8_2:57078103-57078122 None:intergenic 30.0%
!!! TAGGGTTTTTGTTTTTGATG+AGG - chr8_2:57078104-57078123 None:intergenic 30.0%
GTACCCTAATATGATTGAAT+TGG + chr8_2:57078635-57078654 Msa1256820:intron 30.0%
TGATTGAATTGGGATTTAGA+TGG + chr8_2:57078646-57078665 Msa1256820:intron 30.0%
!! TGATTCATGTTTTAGACTAG+TGG + chr8_2:57078704-57078723 Msa1256820:intron 30.0%
ACAAAAACATTAACGGTACA+AGG - chr8_2:57079326-57079345 None:intergenic 30.0%
AAGGTTACAAAGAGTTTAGA+GGG - chr8_2:57079377-57079396 None:intergenic 30.0%
AAAGGTTACAAAGAGTTTAG+AGG - chr8_2:57079378-57079397 None:intergenic 30.0%
! AACATGGACAAATATTTTCC+TGG - chr8_2:57079485-57079504 None:intergenic 30.0%
TTCTCTCCTTTATATCTTCT+AGG + chr8_2:57079512-57079531 Msa1256820:intron 30.0%
TCTCTCCTTTATATCTTCTA+GGG + chr8_2:57079513-57079532 Msa1256820:intron 30.0%
TCTCTTTCCCTTTCAAATAA+AGG + chr8_2:57079561-57079580 Msa1256820:intron 30.0%
TTACAATATGAGAGAGATTG+AGG + chr8_2:57079654-57079673 Msa1256820:intron 30.0%
TACAATATGAGAGAGATTGA+GGG + chr8_2:57079655-57079674 Msa1256820:intron 30.0%
!!! TTAGTTTTGCATTTATGCGT+TGG + chr8_2:57079721-57079740 Msa1256820:intron 30.0%
! TCAAGAGCATAATCATAGTA+AGG - chr8_2:57079920-57079939 None:intergenic 30.0%
! AGCTTTCCTTCATATTTTGT+TGG + chr8_2:57079972-57079991 Msa1256820:intron 30.0%
TTGGATTTATTGTACAAGCA+TGG + chr8_2:57079991-57080010 Msa1256820:intron 30.0%
TTATTGTACAACTGCTTCTA+TGG + chr8_2:57080150-57080169 Msa1256820:intron 30.0%
AACTGCTTCTATGGTTTAAT+TGG + chr8_2:57080159-57080178 Msa1256820:intron 30.0%
AAGTACAAGAACTATGACTT+TGG + chr8_2:57080393-57080412 Msa1256820:CDS 30.0%
AATAAAGATCTTCACACCTA+GGG - chr8_2:57080509-57080528 None:intergenic 30.0%
TAATAAAGATCTTCACACCT+AGG - chr8_2:57080510-57080529 None:intergenic 30.0%
GTGAAGATCTTTATTATCCT+CGG + chr8_2:57080514-57080533 Msa1256820:CDS 30.0%
AAAGCAAGGAAAAAAAAGTG+AGG - chr8_2:57080658-57080677 None:intergenic 30.0%
TCAAATGAAACTCAAAAGCA+AGG - chr8_2:57080672-57080691 None:intergenic 30.0%
AATATATGCCAGCTAGTATT+TGG + chr8_2:57080777-57080796 Msa1256820:intron 30.0%
GTGAAAATATTTCTTGTGCT+TGG + chr8_2:57080896-57080915 Msa1256820:intron 30.0%
TATCTTGCATATGCATTATG+GGG + chr8_2:57080990-57081009 Msa1256820:intron 30.0%
!! ATATTCGTTTTTGATAGACC+TGG - chr8_2:57081030-57081049 None:intergenic 30.0%
!! TTTGTTTAGTATCGATTCCA+TGG + chr8_2:57081319-57081338 Msa1256820:intron 30.0%
! ATGTTCTGGCTATATAATTG+TGG + chr8_2:57081495-57081514 Msa1256820:intron 30.0%
TAAGCTTTCATGAAAGTAAG+AGG + chr8_2:57081720-57081739 Msa1256820:three_prime_UTR 30.0%
CAGAAGAGTTAAATGAGATT+CGG - chr8_2:57081750-57081769 None:intergenic 30.0%
! AACGGATGTCTATATTTTAC+TGG - chr8_2:57081818-57081837 None:intergenic 30.0%
!! ACATCCGTTTTACTTGTTTT+AGG + chr8_2:57081829-57081848 Msa1256820:three_prime_UTR 30.0%
!!! TCCGTTTTAAGTTGAATTTG+TGG + chr8_2:57082058-57082077 Msa1256820:three_prime_UTR 30.0%
CTAATTCTCAACTTAAGCAA+AGG - chr8_2:57078013-57078032 None:intergenic 30.0%
!!! AGGGTTTTTGTTTTTGATGA+GGG - chr8_2:57078103-57078122 None:intergenic 30.0%
!!! TAGGGTTTTTGTTTTTGATG+AGG - chr8_2:57078104-57078123 None:intergenic 30.0%
GTACCCTAATATGATTGAAT+TGG + chr8_2:57078635-57078654 Msa1256820:intron 30.0%
TGATTGAATTGGGATTTAGA+TGG + chr8_2:57078646-57078665 Msa1256820:intron 30.0%
!! TGATTCATGTTTTAGACTAG+TGG + chr8_2:57078704-57078723 Msa1256820:intron 30.0%
ACAAAAACATTAACGGTACA+AGG - chr8_2:57079326-57079345 None:intergenic 30.0%
AAGGTTACAAAGAGTTTAGA+GGG - chr8_2:57079377-57079396 None:intergenic 30.0%
AAAGGTTACAAAGAGTTTAG+AGG - chr8_2:57079378-57079397 None:intergenic 30.0%
! AACATGGACAAATATTTTCC+TGG - chr8_2:57079485-57079504 None:intergenic 30.0%
TTCTCTCCTTTATATCTTCT+AGG + chr8_2:57079512-57079531 Msa1256820:intron 30.0%
TCTCTCCTTTATATCTTCTA+GGG + chr8_2:57079513-57079532 Msa1256820:intron 30.0%
TCTCTTTCCCTTTCAAATAA+AGG + chr8_2:57079561-57079580 Msa1256820:intron 30.0%
TTACAATATGAGAGAGATTG+AGG + chr8_2:57079654-57079673 Msa1256820:intron 30.0%
TACAATATGAGAGAGATTGA+GGG + chr8_2:57079655-57079674 Msa1256820:intron 30.0%
!!! TTAGTTTTGCATTTATGCGT+TGG + chr8_2:57079721-57079740 Msa1256820:intron 30.0%
! TCAAGAGCATAATCATAGTA+AGG - chr8_2:57079920-57079939 None:intergenic 30.0%
! AGCTTTCCTTCATATTTTGT+TGG + chr8_2:57079972-57079991 Msa1256820:intron 30.0%
TTGGATTTATTGTACAAGCA+TGG + chr8_2:57079991-57080010 Msa1256820:intron 30.0%
TTATTGTACAACTGCTTCTA+TGG + chr8_2:57080150-57080169 Msa1256820:intron 30.0%
AACTGCTTCTATGGTTTAAT+TGG + chr8_2:57080159-57080178 Msa1256820:intron 30.0%
AAGTACAAGAACTATGACTT+TGG + chr8_2:57080393-57080412 Msa1256820:CDS 30.0%
AATAAAGATCTTCACACCTA+GGG - chr8_2:57080509-57080528 None:intergenic 30.0%
TAATAAAGATCTTCACACCT+AGG - chr8_2:57080510-57080529 None:intergenic 30.0%
GTGAAGATCTTTATTATCCT+CGG + chr8_2:57080514-57080533 Msa1256820:CDS 30.0%
AAAGCAAGGAAAAAAAAGTG+AGG - chr8_2:57080658-57080677 None:intergenic 30.0%
TCAAATGAAACTCAAAAGCA+AGG - chr8_2:57080672-57080691 None:intergenic 30.0%
AATATATGCCAGCTAGTATT+TGG + chr8_2:57080777-57080796 Msa1256820:intron 30.0%
GTGAAAATATTTCTTGTGCT+TGG + chr8_2:57080896-57080915 Msa1256820:intron 30.0%
TATCTTGCATATGCATTATG+GGG + chr8_2:57080990-57081009 Msa1256820:intron 30.0%
!! ATATTCGTTTTTGATAGACC+TGG - chr8_2:57081030-57081049 None:intergenic 30.0%
!! TTTGTTTAGTATCGATTCCA+TGG + chr8_2:57081319-57081338 Msa1256820:intron 30.0%
! ATGTTCTGGCTATATAATTG+TGG + chr8_2:57081495-57081514 Msa1256820:intron 30.0%
TAAGCTTTCATGAAAGTAAG+AGG + chr8_2:57081720-57081739 Msa1256820:three_prime_UTR 30.0%
CAGAAGAGTTAAATGAGATT+CGG - chr8_2:57081750-57081769 None:intergenic 30.0%
! AACGGATGTCTATATTTTAC+TGG - chr8_2:57081818-57081837 None:intergenic 30.0%
!! ACATCCGTTTTACTTGTTTT+AGG + chr8_2:57081829-57081848 Msa1256820:three_prime_UTR 30.0%
!!! TCCGTTTTAAGTTGAATTTG+TGG + chr8_2:57082058-57082077 Msa1256820:three_prime_UTR 30.0%
TCAACTTAAGCAAAGGTAGT+AGG - chr8_2:57078006-57078025 None:intergenic 35.0%
TTGAGACACAAAGTGTGTTA+GGG - chr8_2:57078122-57078141 None:intergenic 35.0%
! TTTGAGACACAAAGTGTGTT+AGG - chr8_2:57078123-57078142 None:intergenic 35.0%
GTCTCAAATCTACAACCAAA+AGG + chr8_2:57078135-57078154 Msa1256820:five_prime_UTR 35.0%
TATATCCTTCTACCTTAGCT+GGG - chr8_2:57078182-57078201 None:intergenic 35.0%
ATATATCCTTCTACCTTAGC+TGG - chr8_2:57078183-57078202 None:intergenic 35.0%
GAAAAAATGTACAAAGGTCG+TGG + chr8_2:57078275-57078294 Msa1256820:exon 35.0%
!!! TTGTTGGTTTTGCCATTGAT+GGG - chr8_2:57078392-57078411 None:intergenic 35.0%
!!! TTTGTTGGTTTTGCCATTGA+TGG - chr8_2:57078393-57078412 None:intergenic 35.0%
! ATTGGTTTCTCTCTCTTTGT+TGG - chr8_2:57078408-57078427 None:intergenic 35.0%
!! AGAAATATTGGCAGTTTTGG+AGG - chr8_2:57078459-57078478 None:intergenic 35.0%
TCCAAAACTGCCAATATTTC+TGG + chr8_2:57078458-57078477 Msa1256820:CDS 35.0%
! ACCAGAAATATTGGCAGTTT+TGG - chr8_2:57078462-57078481 None:intergenic 35.0%
GAAATGGGTACCAGAAATAT+TGG - chr8_2:57078471-57078490 None:intergenic 35.0%
ATTGGGATTTAGATGGTTGT+TGG + chr8_2:57078653-57078672 Msa1256820:intron 35.0%
AAAAAAAATTGGGTCCGAAG+TGG - chr8_2:57078811-57078830 None:intergenic 35.0%
TAGAACCCAATTTGTGCAAA+CGG + chr8_2:57078888-57078907 Msa1256820:intron 35.0%
GGAAGCTTAGAGGTAAATTA+GGG + chr8_2:57078909-57078928 Msa1256820:intron 35.0%
TATGTTGTTGTGTGATCGAT+CGG + chr8_2:57078965-57078984 Msa1256820:intron 35.0%
GTGACTTATCATTTCCGATA+AGG + chr8_2:57078999-57079018 Msa1256820:intron 35.0%
GTGTTCAGTGATTACCTTAT+CGG - chr8_2:57079016-57079035 None:intergenic 35.0%
! CTGGTGATTTTTGTCTTTAC+TGG + chr8_2:57079286-57079305 Msa1256820:intron 35.0%
AGGTTACAAAGAGTTTAGAG+GGG - chr8_2:57079376-57079395 None:intergenic 35.0%
! ATATTTTCCTGGAGCATACA+AGG - chr8_2:57079474-57079493 None:intergenic 35.0%
AGGAACCCTAGAAGATATAA+AGG - chr8_2:57079521-57079540 None:intergenic 35.0%
TAACAAGCAGAAACAGCATA+AGG - chr8_2:57079541-57079560 None:intergenic 35.0%
! AGGAAATGAGTTCTTTTGTG+AGG + chr8_2:57079838-57079857 Msa1256820:CDS 35.0%
! CATAATCATAGTAAGGCACT+TGG - chr8_2:57079913-57079932 None:intergenic 35.0%
CGTTACATATTGACAAGCAA+AGG + chr8_2:57080265-57080284 Msa1256820:CDS 35.0%
CATATTGACAAGCAAAGGAA+TGG + chr8_2:57080270-57080289 Msa1256820:CDS 35.0%
! CTTTTCATGCTTTACTATCC+AGG + chr8_2:57080327-57080346 Msa1256820:intron 35.0%
TGTTAACAATGTCAATCTCC+TGG - chr8_2:57080348-57080367 None:intergenic 35.0%
! ATTTTCACAGTACTTGACCT+AGG - chr8_2:57080480-57080499 None:intergenic 35.0%
CTGTGAAAATATATTGCCCT+AGG + chr8_2:57080490-57080509 Msa1256820:CDS 35.0%
AAATAGCTTCAGTGACATAG+TGG - chr8_2:57080623-57080642 None:intergenic 35.0%
! TTTGTAGGATGTGACCTTTT+AGG + chr8_2:57080723-57080742 Msa1256820:intron 35.0%
TTTCCATACCAAATACTAGC+TGG - chr8_2:57080788-57080807 None:intergenic 35.0%
ATCTTGCATATGCATTATGG+GGG + chr8_2:57080991-57081010 Msa1256820:intron 35.0%
! AGTCAACAAACACTTTTCAG+AGG - chr8_2:57081059-57081078 None:intergenic 35.0%
GGTTACAACAACTAGAAACA+CGG - chr8_2:57081131-57081150 None:intergenic 35.0%
! ATGGCAGTTTCTGAAAACTT+TGG + chr8_2:57081160-57081179 Msa1256820:intron 35.0%
! TGGCAGTTTCTGAAAACTTT+GGG + chr8_2:57081161-57081180 Msa1256820:intron 35.0%
!!! CTGAAAAGTGACCAGTTTTT+TGG + chr8_2:57081210-57081229 Msa1256820:intron 35.0%
! GACATTGATGGAGCTTATTT+TGG + chr8_2:57081577-57081596 Msa1256820:intron 35.0%
AGTTTGAACCCAAAAACTCT+TGG - chr8_2:57081676-57081695 None:intergenic 35.0%
CTCATTTAACTCTTCTGTTG+TGG + chr8_2:57081753-57081772 Msa1256820:three_prime_UTR 35.0%
CGCTCCTAAAACAAGTAAAA+CGG - chr8_2:57081836-57081855 None:intergenic 35.0%
TTGAAGCTGAAAGTGAAACT+AGG - chr8_2:57081897-57081916 None:intergenic 35.0%
AATTCAATGAGCAAGTGCTT+AGG + chr8_2:57081916-57081935 Msa1256820:three_prime_UTR 35.0%
TCAACTTAAGCAAAGGTAGT+AGG - chr8_2:57078006-57078025 None:intergenic 35.0%
TTGAGACACAAAGTGTGTTA+GGG - chr8_2:57078122-57078141 None:intergenic 35.0%
! TTTGAGACACAAAGTGTGTT+AGG - chr8_2:57078123-57078142 None:intergenic 35.0%
GTCTCAAATCTACAACCAAA+AGG + chr8_2:57078135-57078154 Msa1256820:five_prime_UTR 35.0%
TATATCCTTCTACCTTAGCT+GGG - chr8_2:57078182-57078201 None:intergenic 35.0%
ATATATCCTTCTACCTTAGC+TGG - chr8_2:57078183-57078202 None:intergenic 35.0%
GAAAAAATGTACAAAGGTCG+TGG + chr8_2:57078275-57078294 Msa1256820:exon 35.0%
!!! TTGTTGGTTTTGCCATTGAT+GGG - chr8_2:57078392-57078411 None:intergenic 35.0%
!!! TTTGTTGGTTTTGCCATTGA+TGG - chr8_2:57078393-57078412 None:intergenic 35.0%
! ATTGGTTTCTCTCTCTTTGT+TGG - chr8_2:57078408-57078427 None:intergenic 35.0%
!! AGAAATATTGGCAGTTTTGG+AGG - chr8_2:57078459-57078478 None:intergenic 35.0%
TCCAAAACTGCCAATATTTC+TGG + chr8_2:57078458-57078477 Msa1256820:CDS 35.0%
! ACCAGAAATATTGGCAGTTT+TGG - chr8_2:57078462-57078481 None:intergenic 35.0%
GAAATGGGTACCAGAAATAT+TGG - chr8_2:57078471-57078490 None:intergenic 35.0%
ATTGGGATTTAGATGGTTGT+TGG + chr8_2:57078653-57078672 Msa1256820:intron 35.0%
AAAAAAAATTGGGTCCGAAG+TGG - chr8_2:57078811-57078830 None:intergenic 35.0%
TAGAACCCAATTTGTGCAAA+CGG + chr8_2:57078888-57078907 Msa1256820:intron 35.0%
GGAAGCTTAGAGGTAAATTA+GGG + chr8_2:57078909-57078928 Msa1256820:intron 35.0%
TATGTTGTTGTGTGATCGAT+CGG + chr8_2:57078965-57078984 Msa1256820:intron 35.0%
GTGACTTATCATTTCCGATA+AGG + chr8_2:57078999-57079018 Msa1256820:intron 35.0%
GTGTTCAGTGATTACCTTAT+CGG - chr8_2:57079016-57079035 None:intergenic 35.0%
! CTGGTGATTTTTGTCTTTAC+TGG + chr8_2:57079286-57079305 Msa1256820:intron 35.0%
AGGTTACAAAGAGTTTAGAG+GGG - chr8_2:57079376-57079395 None:intergenic 35.0%
! ATATTTTCCTGGAGCATACA+AGG - chr8_2:57079474-57079493 None:intergenic 35.0%
AGGAACCCTAGAAGATATAA+AGG - chr8_2:57079521-57079540 None:intergenic 35.0%
TAACAAGCAGAAACAGCATA+AGG - chr8_2:57079541-57079560 None:intergenic 35.0%
! AGGAAATGAGTTCTTTTGTG+AGG + chr8_2:57079838-57079857 Msa1256820:CDS 35.0%
! CATAATCATAGTAAGGCACT+TGG - chr8_2:57079913-57079932 None:intergenic 35.0%
CGTTACATATTGACAAGCAA+AGG + chr8_2:57080265-57080284 Msa1256820:CDS 35.0%
CATATTGACAAGCAAAGGAA+TGG + chr8_2:57080270-57080289 Msa1256820:CDS 35.0%
! CTTTTCATGCTTTACTATCC+AGG + chr8_2:57080327-57080346 Msa1256820:intron 35.0%
TGTTAACAATGTCAATCTCC+TGG - chr8_2:57080348-57080367 None:intergenic 35.0%
! ATTTTCACAGTACTTGACCT+AGG - chr8_2:57080480-57080499 None:intergenic 35.0%
CTGTGAAAATATATTGCCCT+AGG + chr8_2:57080490-57080509 Msa1256820:CDS 35.0%
AAATAGCTTCAGTGACATAG+TGG - chr8_2:57080623-57080642 None:intergenic 35.0%
! TTTGTAGGATGTGACCTTTT+AGG + chr8_2:57080723-57080742 Msa1256820:intron 35.0%
TTTCCATACCAAATACTAGC+TGG - chr8_2:57080788-57080807 None:intergenic 35.0%
ATCTTGCATATGCATTATGG+GGG + chr8_2:57080991-57081010 Msa1256820:intron 35.0%
! AGTCAACAAACACTTTTCAG+AGG - chr8_2:57081059-57081078 None:intergenic 35.0%
GGTTACAACAACTAGAAACA+CGG - chr8_2:57081131-57081150 None:intergenic 35.0%
! ATGGCAGTTTCTGAAAACTT+TGG + chr8_2:57081160-57081179 Msa1256820:intron 35.0%
! TGGCAGTTTCTGAAAACTTT+GGG + chr8_2:57081161-57081180 Msa1256820:intron 35.0%
!!! CTGAAAAGTGACCAGTTTTT+TGG + chr8_2:57081210-57081229 Msa1256820:intron 35.0%
! GACATTGATGGAGCTTATTT+TGG + chr8_2:57081577-57081596 Msa1256820:intron 35.0%
AGTTTGAACCCAAAAACTCT+TGG - chr8_2:57081676-57081695 None:intergenic 35.0%
CTCATTTAACTCTTCTGTTG+TGG + chr8_2:57081753-57081772 Msa1256820:three_prime_UTR 35.0%
CGCTCCTAAAACAAGTAAAA+CGG - chr8_2:57081836-57081855 None:intergenic 35.0%
TTGAAGCTGAAAGTGAAACT+AGG - chr8_2:57081897-57081916 None:intergenic 35.0%
AATTCAATGAGCAAGTGCTT+AGG + chr8_2:57081916-57081935 Msa1256820:three_prime_UTR 35.0%
!! CCTTTCGGCTATTTTCCTTT+TGG - chr8_2:57078153-57078172 None:intergenic 40.0%
CCAAAAGGAAAATAGCCGAA+AGG + chr8_2:57078150-57078169 Msa1256820:five_prime_UTR 40.0%
TTAGCTGGGAAAATGCCTTT+CGG - chr8_2:57078168-57078187 None:intergenic 40.0%
! ATTTTCCCAGCTAAGGTAGA+AGG + chr8_2:57078174-57078193 Msa1256820:five_prime_UTR 40.0%
AAAATGTACAAAGGTCGTGG+TGG + chr8_2:57078278-57078297 Msa1256820:exon 40.0%
GAGAGAAACCAATACCATCA+AGG + chr8_2:57078415-57078434 Msa1256820:CDS 40.0%
TTTGGAGGATCGTTGAAGAA+GGG - chr8_2:57078444-57078463 None:intergenic 40.0%
!! TTTTGGAGGATCGTTGAAGA+AGG - chr8_2:57078445-57078464 None:intergenic 40.0%
GATATCCAGTCTATCAAGCT+AGG - chr8_2:57078751-57078770 None:intergenic 40.0%
ACTCACACTTTACAACTTCG+AGG - chr8_2:57078785-57078804 None:intergenic 40.0%
! AAAGTGTGAGTTTGCCACTT+CGG + chr8_2:57078794-57078813 Msa1256820:intron 40.0%
AGCTTCCGTTTGCACAAATT+GGG - chr8_2:57078896-57078915 None:intergenic 40.0%
AAGCTTCCGTTTGCACAAAT+TGG - chr8_2:57078897-57078916 None:intergenic 40.0%
CGGAAGCTTAGAGGTAAATT+AGG + chr8_2:57078908-57078927 Msa1256820:intron 40.0%
AGCTTAGAGGTAAATTAGGG+AGG + chr8_2:57078912-57078931 Msa1256820:intron 40.0%
TTAGAGGTAAATTAGGGAGG+AGG + chr8_2:57078915-57078934 Msa1256820:intron 40.0%
TAGAGGTAAATTAGGGAGGA+GGG + chr8_2:57078916-57078935 Msa1256820:intron 40.0%
ATGTTGTTGTGTGATCGATC+GGG + chr8_2:57078966-57078985 Msa1256820:intron 40.0%
TCTTGATCTTATCCACCAGT+TGG - chr8_2:57079038-57079057 None:intergenic 40.0%
ATAAGATCAAGACCACCTTG+CGG + chr8_2:57079046-57079065 Msa1256820:intron 40.0%
TTCCATATCCTACCTGTAGT+AGG - chr8_2:57079109-57079128 None:intergenic 40.0%
! TTAGAGTACTTCTTGTACCC+TGG + chr8_2:57079346-57079365 Msa1256820:intron 40.0%
! TAGAGTACTTCTTGTACCCT+GGG + chr8_2:57079347-57079366 Msa1256820:intron 40.0%
TTTATCACCTTGTATGCTCC+AGG + chr8_2:57079464-57079483 Msa1256820:intron 40.0%
AGGAGAGAAAAGACAGAACA+TGG - chr8_2:57079501-57079520 None:intergenic 40.0%
TGAAACAGACAGTGAAGAGT+CGG + chr8_2:57079757-57079776 Msa1256820:CDS 40.0%
CACAAAGGTTGAAGTCATCT+TGG - chr8_2:57079880-57079899 None:intergenic 40.0%
CAAGATGACTTCAACCTTTG+TGG + chr8_2:57079878-57079897 Msa1256820:CDS 40.0%
TTGGATGTTGAATCCTCTCA+TGG + chr8_2:57079947-57079966 Msa1256820:CDS 40.0%
CATAGGTGATATGTTCACAG+AGG + chr8_2:57080186-57080205 Msa1256820:intron 40.0%
AAGGATACTGCCTTGATACT+TGG - chr8_2:57080541-57080560 None:intergenic 40.0%
!! GGATGTGACCTTTTAGGTAT+AGG + chr8_2:57080729-57080748 Msa1256820:intron 40.0%
ATGCCAGCTAGTATTTGGTA+TGG + chr8_2:57080782-57080801 Msa1256820:intron 40.0%
TATAAACTGCTCTCTGGACA+TGG + chr8_2:57080832-57080851 Msa1256820:intron 40.0%
AAGACTTTGCTGCTCCATAA+TGG + chr8_2:57080938-57080957 Msa1256820:intron 40.0%
CTAGTTGTTGTAACCTCAAG+TGG + chr8_2:57081136-57081155 Msa1256820:intron 40.0%
TGTTGTAACCTCAAGTGGAA+TGG + chr8_2:57081141-57081160 Msa1256820:intron 40.0%
TCAATGTCTAGACAGAGTCA+AGG - chr8_2:57081565-57081584 None:intergenic 40.0%
TGACTCTGTCTAGACATTGA+TGG + chr8_2:57081565-57081584 Msa1256820:intron 40.0%
TATGTCATCAAGAAGAGGTG+TGG - chr8_2:57081613-57081632 None:intergenic 40.0%
! CACCTCTTCTTGATGACATA+TGG + chr8_2:57081613-57081632 Msa1256820:CDS 40.0%
GTCCATATGTCATCAAGAAG+AGG - chr8_2:57081618-57081637 None:intergenic 40.0%
! GCTACGTTCCAAGAGTTTTT+GGG + chr8_2:57081665-57081684 Msa1256820:CDS 40.0%
AGCTTAAACTTCCAGCTTCA+TGG - chr8_2:57081706-57081725 None:intergenic 40.0%
!! CCTTTCGGCTATTTTCCTTT+TGG - chr8_2:57078153-57078172 None:intergenic 40.0%
CCAAAAGGAAAATAGCCGAA+AGG + chr8_2:57078150-57078169 Msa1256820:five_prime_UTR 40.0%
TTAGCTGGGAAAATGCCTTT+CGG - chr8_2:57078168-57078187 None:intergenic 40.0%
! ATTTTCCCAGCTAAGGTAGA+AGG + chr8_2:57078174-57078193 Msa1256820:five_prime_UTR 40.0%
AAAATGTACAAAGGTCGTGG+TGG + chr8_2:57078278-57078297 Msa1256820:exon 40.0%
GAGAGAAACCAATACCATCA+AGG + chr8_2:57078415-57078434 Msa1256820:CDS 40.0%
TTTGGAGGATCGTTGAAGAA+GGG - chr8_2:57078444-57078463 None:intergenic 40.0%
!! TTTTGGAGGATCGTTGAAGA+AGG - chr8_2:57078445-57078464 None:intergenic 40.0%
GATATCCAGTCTATCAAGCT+AGG - chr8_2:57078751-57078770 None:intergenic 40.0%
ACTCACACTTTACAACTTCG+AGG - chr8_2:57078785-57078804 None:intergenic 40.0%
! AAAGTGTGAGTTTGCCACTT+CGG + chr8_2:57078794-57078813 Msa1256820:intron 40.0%
AGCTTCCGTTTGCACAAATT+GGG - chr8_2:57078896-57078915 None:intergenic 40.0%
AAGCTTCCGTTTGCACAAAT+TGG - chr8_2:57078897-57078916 None:intergenic 40.0%
CGGAAGCTTAGAGGTAAATT+AGG + chr8_2:57078908-57078927 Msa1256820:intron 40.0%
AGCTTAGAGGTAAATTAGGG+AGG + chr8_2:57078912-57078931 Msa1256820:intron 40.0%
TTAGAGGTAAATTAGGGAGG+AGG + chr8_2:57078915-57078934 Msa1256820:intron 40.0%
TAGAGGTAAATTAGGGAGGA+GGG + chr8_2:57078916-57078935 Msa1256820:intron 40.0%
ATGTTGTTGTGTGATCGATC+GGG + chr8_2:57078966-57078985 Msa1256820:intron 40.0%
TCTTGATCTTATCCACCAGT+TGG - chr8_2:57079038-57079057 None:intergenic 40.0%
ATAAGATCAAGACCACCTTG+CGG + chr8_2:57079046-57079065 Msa1256820:intron 40.0%
TTCCATATCCTACCTGTAGT+AGG - chr8_2:57079109-57079128 None:intergenic 40.0%
! TTAGAGTACTTCTTGTACCC+TGG + chr8_2:57079346-57079365 Msa1256820:intron 40.0%
! TAGAGTACTTCTTGTACCCT+GGG + chr8_2:57079347-57079366 Msa1256820:intron 40.0%
TTTATCACCTTGTATGCTCC+AGG + chr8_2:57079464-57079483 Msa1256820:intron 40.0%
AGGAGAGAAAAGACAGAACA+TGG - chr8_2:57079501-57079520 None:intergenic 40.0%
TGAAACAGACAGTGAAGAGT+CGG + chr8_2:57079757-57079776 Msa1256820:CDS 40.0%
CACAAAGGTTGAAGTCATCT+TGG - chr8_2:57079880-57079899 None:intergenic 40.0%
CAAGATGACTTCAACCTTTG+TGG + chr8_2:57079878-57079897 Msa1256820:CDS 40.0%
TTGGATGTTGAATCCTCTCA+TGG + chr8_2:57079947-57079966 Msa1256820:CDS 40.0%
CATAGGTGATATGTTCACAG+AGG + chr8_2:57080186-57080205 Msa1256820:intron 40.0%
AAGGATACTGCCTTGATACT+TGG - chr8_2:57080541-57080560 None:intergenic 40.0%
!! GGATGTGACCTTTTAGGTAT+AGG + chr8_2:57080729-57080748 Msa1256820:intron 40.0%
ATGCCAGCTAGTATTTGGTA+TGG + chr8_2:57080782-57080801 Msa1256820:intron 40.0%
TATAAACTGCTCTCTGGACA+TGG + chr8_2:57080832-57080851 Msa1256820:intron 40.0%
AAGACTTTGCTGCTCCATAA+TGG + chr8_2:57080938-57080957 Msa1256820:intron 40.0%
CTAGTTGTTGTAACCTCAAG+TGG + chr8_2:57081136-57081155 Msa1256820:intron 40.0%
TGTTGTAACCTCAAGTGGAA+TGG + chr8_2:57081141-57081160 Msa1256820:intron 40.0%
TCAATGTCTAGACAGAGTCA+AGG - chr8_2:57081565-57081584 None:intergenic 40.0%
TGACTCTGTCTAGACATTGA+TGG + chr8_2:57081565-57081584 Msa1256820:intron 40.0%
TATGTCATCAAGAAGAGGTG+TGG - chr8_2:57081613-57081632 None:intergenic 40.0%
! CACCTCTTCTTGATGACATA+TGG + chr8_2:57081613-57081632 Msa1256820:CDS 40.0%
GTCCATATGTCATCAAGAAG+AGG - chr8_2:57081618-57081637 None:intergenic 40.0%
! GCTACGTTCCAAGAGTTTTT+GGG + chr8_2:57081665-57081684 Msa1256820:CDS 40.0%
AGCTTAAACTTCCAGCTTCA+TGG - chr8_2:57081706-57081725 None:intergenic 40.0%
!!! GAAAGGCATTTTCCCAGCTA+AGG + chr8_2:57078167-57078186 Msa1256820:five_prime_UTR 45.0%
! TGGTTCTGCCTCCAACAAAT+CGG + chr8_2:57078298-57078317 Msa1256820:CDS 45.0%
! CTTTCGATCCTCCGATTTGT+TGG - chr8_2:57078312-57078331 None:intergenic 45.0%
! AAGGGGATCCTTGATGGTAT+TGG - chr8_2:57078426-57078445 None:intergenic 45.0%
TTGAAGAAGGGGATCCTTGA+TGG - chr8_2:57078432-57078451 None:intergenic 45.0%
TTGGAGGATCGTTGAAGAAG+GGG - chr8_2:57078443-57078462 None:intergenic 45.0%
TGAGACCTAGCTTGATAGAC+TGG + chr8_2:57078743-57078762 Msa1256820:intron 45.0%
ATAGACTGGATATCCTCACC+CGG + chr8_2:57078757-57078776 Msa1256820:intron 45.0%
TTGTGCAAACGGAAGCTTAG+AGG + chr8_2:57078899-57078918 Msa1256820:intron 45.0%
AGAGGTAAATTAGGGAGGAG+GGG + chr8_2:57078917-57078936 Msa1256820:intron 45.0%
!!! GGTTAGGTTGGCTTTTGGTT+TGG + chr8_2:57078942-57078961 Msa1256820:intron 45.0%
GGTAATCACTGAACACCAAC+TGG + chr8_2:57079020-57079039 Msa1256820:intron 45.0%
AATCACTGAACACCAACTGG+TGG + chr8_2:57079023-57079042 Msa1256820:intron 45.0%
TAAGAACCATTTCCGCAAGG+TGG - chr8_2:57079061-57079080 None:intergenic 45.0%
ACCTTGCGGAAATGGTTCTT+AGG + chr8_2:57079060-57079079 Msa1256820:intron 45.0%
CCTTGCGGAAATGGTTCTTA+GGG + chr8_2:57079061-57079080 Msa1256820:intron 45.0%
!! TGGTTCTTAGGGAAGCATTC+TGG + chr8_2:57079072-57079091 Msa1256820:intron 45.0%
GACATTACTGCTCCTACTAC+AGG + chr8_2:57079094-57079113 Msa1256820:intron 45.0%
TTACTGCTCCTACTACAGGT+AGG + chr8_2:57079098-57079117 Msa1256820:intron 45.0%
CTCCTACTACAGGTAGGATA+TGG + chr8_2:57079104-57079123 Msa1256820:intron 45.0%
TCTTTGTCTCGTTCAGCTGA+TGG + chr8_2:57079207-57079226 Msa1256820:intron 45.0%
CTTTGTCTCGTTCAGCTGAT+GGG + chr8_2:57079208-57079227 Msa1256820:intron 45.0%
! GCTGATGGGTAATCTGTTTC+TGG + chr8_2:57079222-57079241 Msa1256820:intron 45.0%
!! TCTGTTTCTGGTGCTTTCCT+TGG + chr8_2:57079234-57079253 Msa1256820:intron 45.0%
!! CTGTTTCTGGTGCTTTCCTT+GGG + chr8_2:57079235-57079254 Msa1256820:intron 45.0%
! CTTTCCTTGGGTTTGGAGTT+GGG + chr8_2:57079247-57079266 Msa1256820:intron 45.0%
! TTTCCTTGGGTTTGGAGTTG+GGG + chr8_2:57079248-57079267 Msa1256820:intron 45.0%
AGGACACATCTTGGATCTCA+TGG + chr8_2:57079801-57079820 Msa1256820:CDS 45.0%
! TCATGGTTCTGCAATCTCAG+AGG + chr8_2:57079818-57079837 Msa1256820:CDS 45.0%
AAGCAAAGGAATGGCTGCTA+TGG + chr8_2:57080279-57080298 Msa1256820:CDS 45.0%
GTCCAGAGCAGTAAACTCTT+GGG - chr8_2:57080425-57080444 None:intergenic 45.0%
TGTCCAGAGCAGTAAACTCT+TGG - chr8_2:57080426-57080445 None:intergenic 45.0%
TATCCTCGGTCCAAGTATCA+AGG + chr8_2:57080528-57080547 Msa1256820:CDS 45.0%
! GTGGGTTATAAACTGCTCTC+TGG + chr8_2:57080826-57080845 Msa1256820:intron 45.0%
AGAAACTGCCATTCCACTTG+AGG - chr8_2:57081152-57081171 None:intergenic 45.0%
TGTGCGATAGAGAAAGACCA+TGG - chr8_2:57081339-57081358 None:intergenic 45.0%
! GGCTACGTTCCAAGAGTTTT+TGG + chr8_2:57081664-57081683 Msa1256820:CDS 45.0%
AACTTCACAAGCCATGAAGC+TGG + chr8_2:57081692-57081711 Msa1256820:exon 45.0%
!!! GAAAGGCATTTTCCCAGCTA+AGG + chr8_2:57078167-57078186 Msa1256820:five_prime_UTR 45.0%
! TGGTTCTGCCTCCAACAAAT+CGG + chr8_2:57078298-57078317 Msa1256820:CDS 45.0%
! CTTTCGATCCTCCGATTTGT+TGG - chr8_2:57078312-57078331 None:intergenic 45.0%
! AAGGGGATCCTTGATGGTAT+TGG - chr8_2:57078426-57078445 None:intergenic 45.0%
TTGAAGAAGGGGATCCTTGA+TGG - chr8_2:57078432-57078451 None:intergenic 45.0%
TTGGAGGATCGTTGAAGAAG+GGG - chr8_2:57078443-57078462 None:intergenic 45.0%
TGAGACCTAGCTTGATAGAC+TGG + chr8_2:57078743-57078762 Msa1256820:intron 45.0%
ATAGACTGGATATCCTCACC+CGG + chr8_2:57078757-57078776 Msa1256820:intron 45.0%
TTGTGCAAACGGAAGCTTAG+AGG + chr8_2:57078899-57078918 Msa1256820:intron 45.0%
AGAGGTAAATTAGGGAGGAG+GGG + chr8_2:57078917-57078936 Msa1256820:intron 45.0%
!!! GGTTAGGTTGGCTTTTGGTT+TGG + chr8_2:57078942-57078961 Msa1256820:intron 45.0%
GGTAATCACTGAACACCAAC+TGG + chr8_2:57079020-57079039 Msa1256820:intron 45.0%
AATCACTGAACACCAACTGG+TGG + chr8_2:57079023-57079042 Msa1256820:intron 45.0%
TAAGAACCATTTCCGCAAGG+TGG - chr8_2:57079061-57079080 None:intergenic 45.0%
ACCTTGCGGAAATGGTTCTT+AGG + chr8_2:57079060-57079079 Msa1256820:intron 45.0%
CCTTGCGGAAATGGTTCTTA+GGG + chr8_2:57079061-57079080 Msa1256820:intron 45.0%
!! TGGTTCTTAGGGAAGCATTC+TGG + chr8_2:57079072-57079091 Msa1256820:intron 45.0%
GACATTACTGCTCCTACTAC+AGG + chr8_2:57079094-57079113 Msa1256820:intron 45.0%
TTACTGCTCCTACTACAGGT+AGG + chr8_2:57079098-57079117 Msa1256820:intron 45.0%
CTCCTACTACAGGTAGGATA+TGG + chr8_2:57079104-57079123 Msa1256820:intron 45.0%
TCTTTGTCTCGTTCAGCTGA+TGG + chr8_2:57079207-57079226 Msa1256820:intron 45.0%
CTTTGTCTCGTTCAGCTGAT+GGG + chr8_2:57079208-57079227 Msa1256820:intron 45.0%
! GCTGATGGGTAATCTGTTTC+TGG + chr8_2:57079222-57079241 Msa1256820:intron 45.0%
!! TCTGTTTCTGGTGCTTTCCT+TGG + chr8_2:57079234-57079253 Msa1256820:intron 45.0%
!! CTGTTTCTGGTGCTTTCCTT+GGG + chr8_2:57079235-57079254 Msa1256820:intron 45.0%
! CTTTCCTTGGGTTTGGAGTT+GGG + chr8_2:57079247-57079266 Msa1256820:intron 45.0%
! TTTCCTTGGGTTTGGAGTTG+GGG + chr8_2:57079248-57079267 Msa1256820:intron 45.0%
AGGACACATCTTGGATCTCA+TGG + chr8_2:57079801-57079820 Msa1256820:CDS 45.0%
! TCATGGTTCTGCAATCTCAG+AGG + chr8_2:57079818-57079837 Msa1256820:CDS 45.0%
AAGCAAAGGAATGGCTGCTA+TGG + chr8_2:57080279-57080298 Msa1256820:CDS 45.0%
GTCCAGAGCAGTAAACTCTT+GGG - chr8_2:57080425-57080444 None:intergenic 45.0%
TGTCCAGAGCAGTAAACTCT+TGG - chr8_2:57080426-57080445 None:intergenic 45.0%
TATCCTCGGTCCAAGTATCA+AGG + chr8_2:57080528-57080547 Msa1256820:CDS 45.0%
! GTGGGTTATAAACTGCTCTC+TGG + chr8_2:57080826-57080845 Msa1256820:intron 45.0%
AGAAACTGCCATTCCACTTG+AGG - chr8_2:57081152-57081171 None:intergenic 45.0%
TGTGCGATAGAGAAAGACCA+TGG - chr8_2:57081339-57081358 None:intergenic 45.0%
! GGCTACGTTCCAAGAGTTTT+TGG + chr8_2:57081664-57081683 Msa1256820:CDS 45.0%
AACTTCACAAGCCATGAAGC+TGG + chr8_2:57081692-57081711 Msa1256820:exon 45.0%
TTCTGCCTCCAACAAATCGG+AGG + chr8_2:57078301-57078320 Msa1256820:CDS 50.0%
!! TCGATCCTCCGATTTGTTGG+AGG - chr8_2:57078309-57078328 None:intergenic 50.0%
TTGATGGGACGCGAAGTTGA+AGG - chr8_2:57078377-57078396 None:intergenic 50.0%
TCAACTTCGCGTCCCATCAA+TGG + chr8_2:57078377-57078396 Msa1256820:CDS 50.0%
TAGACTGGATATCCTCACCC+GGG + chr8_2:57078758-57078777 Msa1256820:intron 50.0%
ACTTTACAACTTCGAGGCCC+CGG - chr8_2:57078779-57078798 None:intergenic 50.0%
GTAAATTAGGGAGGAGGGGT+GGG + chr8_2:57078921-57078940 Msa1256820:intron 50.0%
TTGTTGTGTGATCGATCGGG+AGG + chr8_2:57078969-57078988 Msa1256820:intron 50.0%
TCAAGACCACCTTGCGGAAA+TGG + chr8_2:57079052-57079071 Msa1256820:intron 50.0%
CCCTAAGAACCATTTCCGCA+AGG - chr8_2:57079064-57079083 None:intergenic 50.0%
ATATGGAACCTACGCTCAGC+TGG + chr8_2:57079121-57079140 Msa1256820:intron 50.0%
ACGTCCACACAAGCCTCTAT+CGG - chr8_2:57079149-57079168 None:intergenic 50.0%
AGGCTTGTGTGGACGTTCTT+TGG + chr8_2:57079153-57079172 Msa1256820:intron 50.0%
GGCTTGTGTGGACGTTCTTT+GGG + chr8_2:57079154-57079173 Msa1256820:intron 50.0%
GCTTGTGTGGACGTTCTTTG+GGG + chr8_2:57079155-57079174 Msa1256820:intron 50.0%
CTTGTGTGGACGTTCTTTGG+GGG + chr8_2:57079156-57079175 Msa1256820:intron 50.0%
! GACGTTCTTTGGGGGATGTA+TGG + chr8_2:57079164-57079183 Msa1256820:intron 50.0%
TTTGGGGGATGTATGGCCTT+GGG + chr8_2:57079171-57079190 Msa1256820:intron 50.0%
TCTGGTGCTTTCCTTGGGTT+TGG + chr8_2:57079240-57079259 Msa1256820:intron 50.0%
! GCTTTCCTTGGGTTTGGAGT+TGG + chr8_2:57079246-57079265 Msa1256820:intron 50.0%
! TTCCTTGGGTTTGGAGTTGG+GGG + chr8_2:57079249-57079268 Msa1256820:intron 50.0%
GAGTTTAGAGGGGAATCCCA+GGG - chr8_2:57079366-57079385 None:intergenic 50.0%
AGAGTTTAGAGGGGAATCCC+AGG - chr8_2:57079367-57079386 None:intergenic 50.0%
!! CATTTATGCGTTGGCTGCAG+AGG + chr8_2:57079730-57079749 Msa1256820:intron 50.0%
AGTGAAGAGTCGGATGTGAG+TGG + chr8_2:57079767-57079786 Msa1256820:CDS 50.0%
!! TCGGATGTGAGTGGTTCTGA+TGG + chr8_2:57079776-57079795 Msa1256820:CDS 50.0%
!! TGTGAGTGGTTCTGATGGAG+AGG + chr8_2:57079781-57079800 Msa1256820:CDS 50.0%
CTGATGGAGAGGACACATCT+TGG + chr8_2:57079792-57079811 Msa1256820:CDS 50.0%
CTTGGCTGCTCAATCCACAA+AGG - chr8_2:57079895-57079914 None:intergenic 50.0%
GAAGGAAAGCTCACCATGAG+AGG - chr8_2:57079963-57079982 None:intergenic 50.0%
TCGGCAGCAGAGATGCTTTA+TGG + chr8_2:57080229-57080248 Msa1256820:CDS 50.0%
TGCCCAAGAGTTTACTGCTC+TGG + chr8_2:57080420-57080439 Msa1256820:CDS 50.0%
GACTGACCAACTGGAAGACA+GGG - chr8_2:57080450-57080469 None:intergenic 50.0%
CTGTCTTCCAGTTGGTCAGT+CGG + chr8_2:57080449-57080468 Msa1256820:CDS 50.0%
TTGGTCAGTCGGACATTCCT+AGG + chr8_2:57080460-57080479 Msa1256820:CDS 50.0%
TGCATATGCATTATGGGGGC+AGG + chr8_2:57080995-57081014 Msa1256820:intron 50.0%
GCATATGCATTATGGGGGCA+GGG + chr8_2:57080996-57081015 Msa1256820:intron 50.0%
GTACTCCTTGCAGCATTCAG+CGG + chr8_2:57081775-57081794 Msa1256820:three_prime_UTR 50.0%
TTGATCCGCTGAATGCTGCA+AGG - chr8_2:57081783-57081802 None:intergenic 50.0%
TTCTGCCTCCAACAAATCGG+AGG + chr8_2:57078301-57078320 Msa1256820:CDS 50.0%
!! TCGATCCTCCGATTTGTTGG+AGG - chr8_2:57078309-57078328 None:intergenic 50.0%
TTGATGGGACGCGAAGTTGA+AGG - chr8_2:57078377-57078396 None:intergenic 50.0%
TCAACTTCGCGTCCCATCAA+TGG + chr8_2:57078377-57078396 Msa1256820:CDS 50.0%
TAGACTGGATATCCTCACCC+GGG + chr8_2:57078758-57078777 Msa1256820:intron 50.0%
ACTTTACAACTTCGAGGCCC+CGG - chr8_2:57078779-57078798 None:intergenic 50.0%
GTAAATTAGGGAGGAGGGGT+GGG + chr8_2:57078921-57078940 Msa1256820:intron 50.0%
TTGTTGTGTGATCGATCGGG+AGG + chr8_2:57078969-57078988 Msa1256820:intron 50.0%
TCAAGACCACCTTGCGGAAA+TGG + chr8_2:57079052-57079071 Msa1256820:intron 50.0%
CCCTAAGAACCATTTCCGCA+AGG - chr8_2:57079064-57079083 None:intergenic 50.0%
ATATGGAACCTACGCTCAGC+TGG + chr8_2:57079121-57079140 Msa1256820:intron 50.0%
ACGTCCACACAAGCCTCTAT+CGG - chr8_2:57079149-57079168 None:intergenic 50.0%
AGGCTTGTGTGGACGTTCTT+TGG + chr8_2:57079153-57079172 Msa1256820:intron 50.0%
GGCTTGTGTGGACGTTCTTT+GGG + chr8_2:57079154-57079173 Msa1256820:intron 50.0%
GCTTGTGTGGACGTTCTTTG+GGG + chr8_2:57079155-57079174 Msa1256820:intron 50.0%
CTTGTGTGGACGTTCTTTGG+GGG + chr8_2:57079156-57079175 Msa1256820:intron 50.0%
! GACGTTCTTTGGGGGATGTA+TGG + chr8_2:57079164-57079183 Msa1256820:intron 50.0%
TTTGGGGGATGTATGGCCTT+GGG + chr8_2:57079171-57079190 Msa1256820:intron 50.0%
TCTGGTGCTTTCCTTGGGTT+TGG + chr8_2:57079240-57079259 Msa1256820:intron 50.0%
! GCTTTCCTTGGGTTTGGAGT+TGG + chr8_2:57079246-57079265 Msa1256820:intron 50.0%
! TTCCTTGGGTTTGGAGTTGG+GGG + chr8_2:57079249-57079268 Msa1256820:intron 50.0%
GAGTTTAGAGGGGAATCCCA+GGG - chr8_2:57079366-57079385 None:intergenic 50.0%
AGAGTTTAGAGGGGAATCCC+AGG - chr8_2:57079367-57079386 None:intergenic 50.0%
!! CATTTATGCGTTGGCTGCAG+AGG + chr8_2:57079730-57079749 Msa1256820:intron 50.0%
AGTGAAGAGTCGGATGTGAG+TGG + chr8_2:57079767-57079786 Msa1256820:CDS 50.0%
!! TCGGATGTGAGTGGTTCTGA+TGG + chr8_2:57079776-57079795 Msa1256820:CDS 50.0%
!! TGTGAGTGGTTCTGATGGAG+AGG + chr8_2:57079781-57079800 Msa1256820:CDS 50.0%
CTGATGGAGAGGACACATCT+TGG + chr8_2:57079792-57079811 Msa1256820:CDS 50.0%
CTTGGCTGCTCAATCCACAA+AGG - chr8_2:57079895-57079914 None:intergenic 50.0%
GAAGGAAAGCTCACCATGAG+AGG - chr8_2:57079963-57079982 None:intergenic 50.0%
TCGGCAGCAGAGATGCTTTA+TGG + chr8_2:57080229-57080248 Msa1256820:CDS 50.0%
TGCCCAAGAGTTTACTGCTC+TGG + chr8_2:57080420-57080439 Msa1256820:CDS 50.0%
GACTGACCAACTGGAAGACA+GGG - chr8_2:57080450-57080469 None:intergenic 50.0%
CTGTCTTCCAGTTGGTCAGT+CGG + chr8_2:57080449-57080468 Msa1256820:CDS 50.0%
TTGGTCAGTCGGACATTCCT+AGG + chr8_2:57080460-57080479 Msa1256820:CDS 50.0%
TGCATATGCATTATGGGGGC+AGG + chr8_2:57080995-57081014 Msa1256820:intron 50.0%
GCATATGCATTATGGGGGCA+GGG + chr8_2:57080996-57081015 Msa1256820:intron 50.0%
GTACTCCTTGCAGCATTCAG+CGG + chr8_2:57081775-57081794 Msa1256820:three_prime_UTR 50.0%
TTGATCCGCTGAATGCTGCA+AGG - chr8_2:57081783-57081802 None:intergenic 50.0%
AGACTGGATATCCTCACCCG+GGG + chr8_2:57078759-57078778 Msa1256820:intron 55.0%
CTTTACAACTTCGAGGCCCC+GGG - chr8_2:57078778-57078797 None:intergenic 55.0%
GGTAAATTAGGGAGGAGGGG+TGG + chr8_2:57078920-57078939 Msa1256820:intron 55.0%
!!! GGGTGGGTTAGGTTGGCTTT+TGG + chr8_2:57078937-57078956 Msa1256820:intron 55.0%
TGTGATCGATCGGGAGGTCT+TGG + chr8_2:57078975-57078994 Msa1256820:intron 55.0%
! CTTTGGGGGATGTATGGCCT+TGG + chr8_2:57079170-57079189 Msa1256820:intron 55.0%
! TTGGGGGATGTATGGCCTTG+GGG + chr8_2:57079172-57079191 Msa1256820:intron 55.0%
! TATGGCCTTGGGGGCTGATT+GGG + chr8_2:57079182-57079201 Msa1256820:intron 55.0%
AACCCCCAACTCCAAACCCA+AGG - chr8_2:57079254-57079273 None:intergenic 55.0%
! TGGGTTTGGAGTTGGGGGTT+TGG + chr8_2:57079254-57079273 Msa1256820:intron 55.0%
GGACAACCCTGTCTTCCAGT+TGG + chr8_2:57080441-57080460 Msa1256820:CDS 55.0%
CGACTGACCAACTGGAAGAC+AGG - chr8_2:57080451-57080470 None:intergenic 55.0%
GGAATGTCCGACTGACCAAC+TGG - chr8_2:57080459-57080478 None:intergenic 55.0%
CTGCCTTGATACTTGGACCG+AGG - chr8_2:57080534-57080553 None:intergenic 55.0%
AAGCCGCAGAAACCAGCTCA+GGG + chr8_2:57081643-57081662 Msa1256820:CDS 55.0%
! TAGCCCTGAGCTGGTTTCTG+CGG - chr8_2:57081649-57081668 None:intergenic 55.0%
AGACTGGATATCCTCACCCG+GGG + chr8_2:57078759-57078778 Msa1256820:intron 55.0%
CTTTACAACTTCGAGGCCCC+GGG - chr8_2:57078778-57078797 None:intergenic 55.0%
GGTAAATTAGGGAGGAGGGG+TGG + chr8_2:57078920-57078939 Msa1256820:intron 55.0%
!!! GGGTGGGTTAGGTTGGCTTT+TGG + chr8_2:57078937-57078956 Msa1256820:intron 55.0%
TGTGATCGATCGGGAGGTCT+TGG + chr8_2:57078975-57078994 Msa1256820:intron 55.0%
! CTTTGGGGGATGTATGGCCT+TGG + chr8_2:57079170-57079189 Msa1256820:intron 55.0%
! TTGGGGGATGTATGGCCTTG+GGG + chr8_2:57079172-57079191 Msa1256820:intron 55.0%
! TATGGCCTTGGGGGCTGATT+GGG + chr8_2:57079182-57079201 Msa1256820:intron 55.0%
AACCCCCAACTCCAAACCCA+AGG - chr8_2:57079254-57079273 None:intergenic 55.0%
! TGGGTTTGGAGTTGGGGGTT+TGG + chr8_2:57079254-57079273 Msa1256820:intron 55.0%
GGACAACCCTGTCTTCCAGT+TGG + chr8_2:57080441-57080460 Msa1256820:CDS 55.0%
CGACTGACCAACTGGAAGAC+AGG - chr8_2:57080451-57080470 None:intergenic 55.0%
GGAATGTCCGACTGACCAAC+TGG - chr8_2:57080459-57080478 None:intergenic 55.0%
CTGCCTTGATACTTGGACCG+AGG - chr8_2:57080534-57080553 None:intergenic 55.0%
AAGCCGCAGAAACCAGCTCA+GGG + chr8_2:57081643-57081662 Msa1256820:CDS 55.0%
! TAGCCCTGAGCTGGTTTCTG+CGG - chr8_2:57081649-57081668 None:intergenic 55.0%
! TTAGGGAGGAGGGGTGGGTT+AGG + chr8_2:57078926-57078945 Msa1256820:intron 60.0%
!! TATCGGTGCCAGCTGAGCGT+AGG - chr8_2:57079132-57079151 None:intergenic 60.0%
!! GGCACCGATAGAGGCTTGTG+TGG + chr8_2:57079142-57079161 Msa1256820:intron 60.0%
! TGGGGGATGTATGGCCTTGG+GGG + chr8_2:57079173-57079192 Msa1256820:intron 60.0%
! GTATGGCCTTGGGGGCTGAT+TGG + chr8_2:57079181-57079200 Msa1256820:intron 60.0%
AGACACCCAATCAGCCCCCA+AGG - chr8_2:57079190-57079209 None:intergenic 60.0%
! GGGGGTTTGGCAGCTTGTTC+TGG + chr8_2:57079267-57079286 Msa1256820:intron 60.0%
GAAGCCGCAGAAACCAGCTC+AGG + chr8_2:57081642-57081661 Msa1256820:CDS 60.0%
CTTGGAACGTAGCCCTGAGC+TGG - chr8_2:57081658-57081677 None:intergenic 60.0%
! TTAGGGAGGAGGGGTGGGTT+AGG + chr8_2:57078926-57078945 Msa1256820:intron 60.0%
!! TATCGGTGCCAGCTGAGCGT+AGG - chr8_2:57079132-57079151 None:intergenic 60.0%
!! GGCACCGATAGAGGCTTGTG+TGG + chr8_2:57079142-57079161 Msa1256820:intron 60.0%
! TGGGGGATGTATGGCCTTGG+GGG + chr8_2:57079173-57079192 Msa1256820:intron 60.0%
! GTATGGCCTTGGGGGCTGAT+TGG + chr8_2:57079181-57079200 Msa1256820:intron 60.0%
AGACACCCAATCAGCCCCCA+AGG - chr8_2:57079190-57079209 None:intergenic 60.0%
! GGGGGTTTGGCAGCTTGTTC+TGG + chr8_2:57079267-57079286 Msa1256820:intron 60.0%
GAAGCCGCAGAAACCAGCTC+AGG + chr8_2:57081642-57081661 Msa1256820:CDS 60.0%
CTTGGAACGTAGCCCTGAGC+TGG - chr8_2:57081658-57081677 None:intergenic 60.0%
!! GGAGGAGGGGTGGGTTAGGT+TGG + chr8_2:57078930-57078949 Msa1256820:intron 65.0%
!! CGCTCAGCTGGCACCGATAG+AGG + chr8_2:57079133-57079152 Msa1256820:intron 65.0%
!! GGAGGAGGGGTGGGTTAGGT+TGG + chr8_2:57078930-57078949 Msa1256820:intron 65.0%
!! CGCTCAGCTGGCACCGATAG+AGG + chr8_2:57079133-57079152 Msa1256820:intron 65.0%
CAACTTCGAGGCCCCGGGTG+AGG - chr8_2:57078773-57078792 None:intergenic 70.0%
GGGGGCAGGGCTGATGATCC+AGG + chr8_2:57081009-57081028 Msa1256820:intron 70.0%
CAACTTCGAGGCCCCGGGTG+AGG - chr8_2:57078773-57078792 None:intergenic 70.0%
GGGGGCAGGGCTGATGATCC+AGG + chr8_2:57081009-57081028 Msa1256820:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 57077988 57082101 57077988 ID=Msa1256820;Name=Msa1256820
chr8_2 mRNA 57077988 57082101 57077988 ID=Msa1256820-mRNA-1;Parent=Msa1256820;Name=Msa1256820-mRNA-1;_AED=0.06;_eAED=0.06;_QI=293|1|1|1|1|1|5|393|274
chr8_2 exon 57077988 57078479 57077988 ID=Msa1256820-mRNA-1:exon:17552;Parent=Msa1256820-mRNA-1
chr8_2 exon 57079750 57079968 57079750 ID=Msa1256820-mRNA-1:exon:17553;Parent=Msa1256820-mRNA-1
chr8_2 exon 57080191 57080300 57080191 ID=Msa1256820-mRNA-1:exon:17554;Parent=Msa1256820-mRNA-1
chr8_2 exon 57080387 57080552 57080387 ID=Msa1256820-mRNA-1:exon:17555;Parent=Msa1256820-mRNA-1
chr8_2 exon 57081578 57082101 57081578 ID=Msa1256820-mRNA-1:exon:17556;Parent=Msa1256820-mRNA-1
chr8_2 five_prime_UTR 57077988 57078280 57077988 ID=Msa1256820-mRNA-1:five_prime_utr;Parent=Msa1256820-mRNA-1
chr8_2 CDS 57078281 57078479 57078281 ID=Msa1256820-mRNA-1:cds;Parent=Msa1256820-mRNA-1
chr8_2 CDS 57079750 57079968 57079750 ID=Msa1256820-mRNA-1:cds;Parent=Msa1256820-mRNA-1
chr8_2 CDS 57080191 57080300 57080191 ID=Msa1256820-mRNA-1:cds;Parent=Msa1256820-mRNA-1
chr8_2 CDS 57080387 57080552 57080387 ID=Msa1256820-mRNA-1:cds;Parent=Msa1256820-mRNA-1
chr8_2 CDS 57081578 57081708 57081578 ID=Msa1256820-mRNA-1:cds;Parent=Msa1256820-mRNA-1
chr8_2 three_prime_UTR 57081709 57082101 57081709 ID=Msa1256820-mRNA-1:three_prime_utr;Parent=Msa1256820-mRNA-1
Gene Sequence

>Msa1256820

ATGTACAAAGGTCGTGGTGGTTCTGCCTCCAACAAATCGGAGGATCGAAAGCGAATCAACGATGTTCTCGATAAGCAGCTTGAACGATCTTCTCCTTCAACTTCGCGTCCCATCAATGGCAAAACCAACAAAGAGAGAGAAACCAATACCATCAAGGATCCCCTTCTTCAACGATCCTCCAAAACTGCCAATATTTCTGAGGAGTCTGAAACAGACAGTGAAGAGTCGGATGTGAGTGGTTCTGATGGAGAGGACACATCTTGGATCTCATGGTTCTGCAATCTCAGAGGAAATGAGTTCTTTTGTGAGGTTGATGATGATTACATCCAAGATGACTTCAACCTTTGTGGATTGAGCAGCCAAGTGCCTTACTATGATTATGCTCTTGATTTGATTTTGGATGTTGAATCCTCTCATGGTGATATGTTCACAGAGGAACAAAACGAGTTAATTGAATCGGCAGCAGAGATGCTTTATGGTATGATTCATGCGCGTTACATATTGACAAGCAAAGGAATGGCTGCTATGCTTGACAAGTACAAGAACTATGACTTTGGTAGATGCCCAAGAGTTTACTGCTCTGGACAACCCTGTCTTCCAGTTGGTCAGTCGGACATTCCTAGGTCAAGTACTGTGAAAATATATTGCCCTAGGTGTGAAGATCTTTATTATCCTCGGTCCAAGTATCAAGGCAACATTGATGGAGCTTATTTTGGAACAACATTTCCACACCTCTTCTTGATGACATATGGACAACTGAAGCCGCAGAAACCAGCTCAGGGCTACGTTCCAAGAGTTTTTGGGTTCAAACTTCACAAGCCATGA
Protein sequence

>Msa1256820

MYKGRGGSASNKSEDRKRINDVLDKQLERSSPSTSRPINGKTNKERETNTIKDPLLQRSSKTANISEESETDSEESDVSGSDGEDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGMIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDLYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPAQGYVPRVFGFKLHKP*